View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0733_high_17 (Length: 449)

Name: NF0733_high_17
Description: NF0733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0733_high_17
NF0733_high_17
[»] chr1 (8 HSPs)
chr1 (22-367)||(28909812-28910170)
chr1 (167-218)||(48830124-48830175)
chr1 (145-183)||(26779951-26779989)
chr1 (163-212)||(4078193-4078242)
chr1 (145-218)||(7218100-7218173)
chr1 (167-220)||(19462814-19462867)
chr1 (145-182)||(34290243-34290280)
chr1 (163-227)||(45205029-45205094)
[»] chr4 (4 HSPs)
chr4 (161-252)||(53155200-53155291)
chr4 (369-419)||(1025389-1025439)
chr4 (206-257)||(9680594-9680647)
chr4 (145-190)||(28423529-28423574)
[»] chr7 (6 HSPs)
chr7 (143-218)||(17989047-17989122)
chr7 (163-218)||(47004058-47004113)
chr7 (168-218)||(2727409-2727459)
chr7 (169-225)||(9527140-9527197)
chr7 (145-182)||(12110367-12110404)
chr7 (145-189)||(28691861-28691905)
[»] chr3 (3 HSPs)
chr3 (145-219)||(35394524-35394598)
chr3 (166-225)||(2321138-2321198)
chr3 (167-225)||(24235731-24235790)
[»] chr8 (4 HSPs)
chr8 (163-256)||(35298521-35298617)
chr8 (145-215)||(42370387-42370457)
chr8 (166-218)||(27728068-27728120)
chr8 (166-218)||(29973052-29973104)
[»] chr6 (5 HSPs)
chr6 (163-218)||(1402967-1403022)
chr6 (169-251)||(2514638-2514722)
chr6 (145-182)||(34430487-34430524)
chr6 (189-256)||(1669858-1669926)
chr6 (145-189)||(26694878-26694922)
[»] chr5 (4 HSPs)
chr5 (73-132)||(3290733-3290792)
chr5 (167-249)||(18704084-18704167)
chr5 (145-228)||(34205199-34205284)
chr5 (194-256)||(37063149-37063213)
[»] chr2 (4 HSPs)
chr2 (145-226)||(36863651-36863733)
chr2 (63-103)||(37419594-37419634)
chr2 (167-225)||(13736341-13736399)
chr2 (145-218)||(11513869-11513942)


Alignment Details
Target: chr1 (Bit Score: 272; Significance: 1e-152; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 22 - 367
Target Start/End: Complemental strand, 28910170 - 28909812
Alignment:
Q  22 catcatcatggctctcttatctttttaggctatgtttagatttgacttgtatgagtttatctacttatataagcacttgtgagttgtgaaactg---ttt 118  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||   |||    
T  28910170 catcatcatggctctcttatctttttaggctatgtttagatt-gatttgtatgagtttatctacttatataagcacttgtgagttgtgagactgctgttt 28910072  T
Q  119 gttagatcttatgacttgtttatatgtt-----------attttcataacttcttcatgatagcttatgaaaacaatgtatagttgatattaaaatagtt 207  Q
    |||||||||||||||||||||||| |||           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28910071 gttagatcttatgacttgtttataagttgttttcatcttattttcataacttcttcatgctagcttatgaaaacaatgtatagttgatattaaaatagtt 28909972  T
Q  208 tgactttatttatcttttattctgaaattgcttatacataagcatttatgttataagcgtttgattgaactatttatccgagcataaccttaatagttag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28909971 tgactttatttatcttttattctgaaattgcttatacataagcatttatgttataagcgtttgattgaactatttatccaagcataaccttaatagttag 28909872  T
Q  308 aaaaaactaatgatgttggacaaagttttaaatcacagtcatactgtgatccttgatatt 367  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28909871 aataaactaatgatgttggacaaagttttaaatcacagtcatattgtgatccttgatatt 28909812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 48830124 - 48830175
Alignment:
Q  167 atagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattt 218  Q
    |||||||||||||||| | ||||| | |||| ||||||||||||||||||||    
T  48830124 atagcttatgaaaacagtttatagcttatatgaaaatagtttgactttattt 48830175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 26779951 - 26779989
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaacaa 183  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  26779951 ttattttcataagttcttcaagatagcttatgaaaacaa 26779989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 4078193 - 4078242
Alignment:
Q  163 catgatagcttatgaaaacaatgtatagttgatattaaaatagtttgact 212  Q
    |||||||||||||||||||||  ||||| | |||| ||||||||||||||    
T  4078193 catgatagcttatgaaaacaacttatagattatatgaaaatagtttgact 4078242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 7218100 - 7218173
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattt 218  Q
    |||||||||||| |||| || ||||| ||||||||||||  ||||| | |||| |||| | |||||||||||||    
T  7218100 ttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttattt 7218173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 19462814 - 19462867
Alignment:
Q  167 atagcttatgaaaacaatgtatagttgatattaaaatagtttgactttatttat 220  Q
    |||||||||||||||||| || |||| |||| ||||  ||||||||||||||||    
T  19462814 atagcttatgaaaacaatttacagtttatatgaaaactgtttgactttatttat 19462867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 34290280 - 34290243
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaaca 182  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  34290280 ttattttcataagttcttcaagatagcttatgaaaaca 34290243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 45205094 - 45205029
Alignment:
Q  163 catgatagcttatgaaaacaatgtatagttgatattaaaatagtttgacttta-tttatcttttat 227  Q
    |||||||||||||||||||||  | ||| | ||||  |||||||||||||||| ||||||||||||    
T  45205094 catgatagcttatgaaaacaacttctagcttatatggaaatagtttgactttattttatcttttat 45205029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 7e-16; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 53155291 - 53155200
Alignment:
Q  161 ttcatgatagcttatgaaaacaatgtatagttgatattaaaatagtttgactttatttatcttttattctgaaattgcttatacataagcat 252  Q
    |||||||||||||||||||| | | |||||   |||| ||||||||| ||||||||||||||||| || | |||| ||||||||||||||||    
T  53155291 ttcatgatagcttatgaaaatagtttatagcatatatgaaaatagttcgactttatttatcttttgttataaaatagcttatacataagcat 53155200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 1025389 - 1025439
Alignment:
Q  369 tgatctcaacatttacaacaaccatatccatgttatgctgaatatcttact 419  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  1025389 tgatgtcaacatttacaacaaccatatccaagttattctgaatatcttact 1025439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 9680647 - 9680594
Alignment:
Q  206 tttgactttattt-atcttttattct-gaaattgcttatacataagcatttatg 257  Q
    ||||||||||||| |||||||||| | ||||| |||||||||||||||||||||    
T  9680647 tttgactttattttatcttttattatcgaaatagcttatacataagcatttatg 9680594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 28423574 - 28423529
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaacaatgtatag 190  Q
    ||||||||||||  ||| |||||||||||| |||||||||||||||    
T  28423574 ttattttcataaactctacatgatagcttaggaaaacaatgtatag 28423529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 17989047 - 17989122
Alignment:
Q  143 tgttattttcataacttcttcatgatagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattt 218  Q
    ||||||||||||||  |||||| || |||||||||||||||  ||||||| |||| |||| |||||||||||||||    
T  17989047 tgttattttcataagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttattt 17989122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 47004113 - 47004058
Alignment:
Q  163 catgatagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattt 218  Q
    |||| |||||||||||||||   ||||||| |||| ||||||||||||||||||||    
T  47004113 catggtagcttatgaaaacagcttatagttcatataaaaatagtttgactttattt 47004058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 2727409 - 2727459
Alignment:
Q  168 tagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattt 218  Q
    |||||||| |||||||| |||||||||||| |||| |||||| ||||||||    
T  2727409 tagcttataaaaacaatttatagttgatatgaaaagagtttgcctttattt 2727459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 9527140 - 9527197
Alignment:
Q  169 agcttatgaaaacaatgtatagttgatattaaaatagtttgactttatt-tatctttt 225  Q
    |||||||||||||||  ||||||| |||| |||| |||||||||||||| ||||||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatctttt 9527197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 12110404 - 12110367
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaaca 182  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  12110404 ttattttcataagttcttcaagatagcttatgaaaaca 12110367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 28691861 - 28691905
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaacaatgtata 189  Q
    ||||||||||||  ||| || ||||||||||||||||||||||||    
T  28691861 ttattttcataagatctccaggatagcttatgaaaacaatgtata 28691905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 35394524 - 35394598
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattta 219  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||| ||||||| ||||   ||| ||||||||||    
T  35394524 ttattttcataaattcttcaagatagcttatgaaaacagtgtatatttgatatgaaaaccatttcactttattta 35394598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 2321198 - 2321138
Alignment:
Q  166 gatagcttatgaaaa-caatgtatagttgatattaaaatagtttgactttatttatctttt 225  Q
    ||||||||||||||| |||  | ||||| |||| |||||||||||||||||||||||||||    
T  2321198 gatagcttatgaaaaacaagatctagtttatatgaaaatagtttgactttatttatctttt 2321138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 24235731 - 24235790
Alignment:
Q  167 atagcttatgaaaacaatgtatagttgatattaaaatagtttgactttat-ttatctttt 225  Q
    |||||||||||||||||  ||||| | ||||| ||||||||||||||||| |||||||||    
T  24235731 atagcttatgaaaacaacttatagcttatattcaaatagtttgactttatattatctttt 24235790  T

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Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 35298521 - 35298617
Alignment:
Q  163 catgatagcttatgaaaacaatgtatagttgatatt-aaaatagtttgacttta-tttatcttttatt-ctgaaattgcttatacataagcatttat 256  Q
    |||||||||||||||||||||  ||||||| ||||| ||||  ||||| ||||| |||||||||| || ||||||| ||||||||||||||| ||||    
T  35298521 catgatagcttatgaaaacaacttatagtttatattgaaaactgtttggctttattttatcttttgttactgaaatagcttatacataagcacttat 35298617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 42370387 - 42370457
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaacaatgtatagttgatattaaaatagtttgacttta 215  Q
    |||||| |||||  ||||||||||||||||||| |||| | ||||| | |||  |||||||||||||||||    
T  42370387 ttatttccataaactcttcatgatagcttatgagaacagtttatagctcataaaaaaatagtttgacttta 42370457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 27728068 - 27728120
Alignment:
Q  166 gatagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattt 218  Q
    ||||||||||||||||||   ||| || |||| ||||||||||||||||||||    
T  27728068 gatagcttatgaaaacaactaatactttatatgaaaatagtttgactttattt 27728120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 29973104 - 29973052
Alignment:
Q  166 gatagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattt 218  Q
    ||||||||||||||||||  ||||| | || | ||||||||||||||||||||    
T  29973104 gatagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttattt 29973052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 1403022 - 1402967
Alignment:
Q  163 catgatagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattt 218  Q
    |||||||||||||||||||||| ||||| | |||| |||||||||| |||||||||    
T  1403022 catgatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattt 1402967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 2514722 - 2514638
Alignment:
Q  169 agcttatgaaaacaatgtatagttgatattaaaatagtttgacttta-tttatcttttattct-gaaattgcttatacataagca 251  Q
    |||||||||||| ||  ||||| | |||| ||| ||||||||||||| ||||||||||||| | ||||| |||||||||||||||    
T  2514722 agcttatgaaaataacttatagctcatataaaattagtttgactttattttatcttttattatagaaatagcttatacataagca 2514638  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 34430487 - 34430524
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaaca 182  Q
    ||||||||||||||||| || |||||||||||||||||    
T  34430487 ttattttcataacttctccaagatagcttatgaaaaca 34430524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 1669858 - 1669926
Alignment:
Q  189 agttgatattaaaatagtttgactttatttatcttttattct-gaaattgcttatacataagcatttat 256  Q
    |||| |||| |||||||| ||||||||| ||||||||||  | ||||| ||||||||||||||| ||||    
T  1669858 agtttatatgaaaatagtatgactttatctatcttttataattgaaatagcttatacataagcacttat 1669926  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 26694922 - 26694878
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaacaatgtata 189  Q
    |||||||||||| ||||||| ||||| ||||||||||||| ||||    
T  26694922 ttattttcataagttcttcaagatagtttatgaaaacaatttata 26694878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 3290733 - 3290792
Alignment:
Q  73 tgagtttatctacttatataagcacttgtgagttgtgaaactgtttgttagatcttatga 132  Q
    |||||||| |||||  ||||||||||||||| ||||||||||||||| |||| |||||||    
T  3290733 tgagtttacctactagtataagcacttgtgaattgtgaaactgtttgatagaacttatga 3290792  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 18704084 - 18704167
Alignment:
Q  167 atagcttatgaaaacaatgtatagttgatattaaaatagtttgactttatttatcttttattct-gaaattgcttatacataag 249  Q
    |||||||||||||||||  ||||| | |||| ||||||| ||||||||||||||||||| || | |||||  ||||||||||||    
T  18704084 atagcttatgaaaacaacttatagcttatataaaaatagcttgactttatttatcttttgttatagaaataacttatacataag 18704167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 34205284 - 34205199
Alignment:
Q  145 ttattttcataa-cttcttcatgatagcttatgaaaacaatgtatagttgatattaaaatagtttgacttta-tttatcttttatt 228  Q
    |||||| ||||| ||| |||| ||||||||||||||||||  ||||| | |||| |||||| |||||||||| |||||| ||||||    
T  34205284 ttatttccataagctttttcaagatagcttatgaaaacaacttatagcttatataaaaataatttgactttactttatcctttatt 34205199  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 37063149 - 37063213
Alignment:
Q  194 atattaaaatagtttgacttta-tttatcttttattct-gaaattgcttatacataagcatttat 256  Q
    |||| ||||||||||||||||| |||||||||| || | ||||| | ||||||||||||||||||    
T  37063149 atatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataagcatttat 37063213  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 36863651 - 36863733
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaacaatgtatagttgatattaaaatagtttgacttta-tttatctttta 226  Q
    ||||||||||||  ||| || ||||||||||||||||||| ||||  | |||| ||||| ||||||||||| |||||||||||    
T  36863651 ttattttcataagctctccaagatagcttatgaaaacaatttataacttatataaaaattgtttgactttattttatctttta 36863733  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 37419594 - 37419634
Alignment:
Q  63 ttgacttgtatgagtttatctacttatataagcacttgtga 103  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  37419594 ttgacttatttgagtttatctacttatataagcacttgtga 37419634  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 13736341 - 13736399
Alignment:
Q  167 atagcttatgaaaacaatgtatagttgatattaaaatagtttgactttatttatctttt 225  Q
    ||||||||||||||||   ||||| |||| | ||||||||||||||| |||||||||||    
T  13736341 atagcttatgaaaacagcttatagctgatgtgaaaatagtttgacttcatttatctttt 13736399  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 11513942 - 11513869
Alignment:
Q  145 ttattttcataacttcttcatgatagcttatgaaaacaatgtatagttgatattaaaatagtttgactttattt 218  Q
    |||||| || || |||| |||||||||||||||||||||  ||||| | |||| |||| | |||||||||||||    
T  11513942 ttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattt 11513869  T

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