View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0733_low_100 (Length: 267)
Name: NF0733_low_100
Description: NF0733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0733_low_100 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 33902847 - 33903084
Alignment:
| Q |
1 |
aatggcagagaaaaatacttctgccattaaggttgtttcaagaaaatccttatggttctttttcacaacaacaacattatttttcatcatgtcatggctc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33902847 |
aatggcagagaaaaatacttctgccattaaggttgtttcaagaaaatctttatggttctttttcacaacaacaacattatttttcatcatgtcatggctc |
33902946 |
T |
|
| Q |
101 |
tttgttctccgttccacacgttcagattcaacaccagccaccatctcacagcttctttccaccacctccaacgacggttcatatttggtaacatctcaat |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
33902947 |
tttgttctccgttccacacgttcagattcaacaccagccaccatctcacagcttctttccaccacctccaacgacggttcagatttggtaacatctcaat |
33903046 |
T |
|
| Q |
201 |
cacaaaactctgaatcctccttcagcaatagagcaatc |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
33903047 |
cacaaaactctgaatcctccttcagcaatagagcaatc |
33903084 |
T |
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