View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0733_low_96 (Length: 271)
Name: NF0733_low_96
Description: NF0733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0733_low_96 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 16352957 - 16352758
Alignment:
| Q |
27 |
agatgaaccaaacggattttctttgatgtgcatgatgatcttgaagaaaaacaccctcccatcttcgctttttgaataaaaccagtctaagcgacaaggg |
126 |
Q |
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| T |
16352957 |
agatgaaccaaacggattttctttgatgtgcatgatgatcttgaagaaaaacaccctcccatcttcgctttttgaataaaaccagtctaagcgacaaggg |
16352858 |
T |
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| Q |
127 |
ttgaatctcagtggatcctgcaggaagctacttctttgaatgttattgatggagaaggatcaaagtgtagcacttttatatagttcaatatgcatatatt |
226 |
Q |
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| T |
16352857 |
ttgaatctcagtggatcctgcaggaagctacttctttgaatgttattgatggagaaggatcaaagtgtagcacttttatatagttcaatatgcatatatt |
16352758 |
T |
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