View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0734_low_29 (Length: 264)
Name: NF0734_low_29
Description: NF0734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0734_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 38926423 - 38926657
Alignment:
| Q |
1 |
aatgaactcctctgctcgttcatcaattccttgcatttgaggtgaagctaatgctaccgactcccacatatcatctgatgtattagttctgtcacatgat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38926423 |
aatgaactcctctgctcgttcatcaattccttgcatttgaggtgaagctaatgctaccgactcccacatatcatctgatgtattagttctgtcacatgat |
38926522 |
T |
|
| Q |
101 |
cgattgcttgctccttctagcacgtcttttttctctcgttgataatcaccaatcttcgcagttatttcaatttgtggtctttgaattggtgtccgtggct |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
38926523 |
cgattgcttgctccttctggcacgtcttttttctctagttgataatcaccaatcttcgcagttatttcgatttgtggtctttgaattggtgtccgtggct |
38926622 |
T |
|
| Q |
201 |
tcaaataacccactaagtcacatggaggctctctg |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
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| T |
38926623 |
tcaaataacccactaagtcacatggaggctctctg |
38926657 |
T |
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