View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0734_low_36 (Length: 251)
Name: NF0734_low_36
Description: NF0734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0734_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 32769266 - 32769488
Alignment:
| Q |
1 |
tatgagatgtattcacccgttttcacggagaaaaatcttccgcttcatgcaagcaagcacgccatcattttcccatgattaattttacccactaactaat |
100 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||| |
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| T |
32769266 |
tatgagatgtattcacccgctttcacggagaaaaatcttccgcttcatgcaagtaagcacaccatcagtttcccatgattaattttacccactaactaat |
32769365 |
T |
|
| Q |
101 |
tagaaatctacatatttgagacctttaataaaatactatataagcaacttcnnnnnnnnagttaaaactatataagcaacttctttaattaaactactag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
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|
| T |
32769366 |
tagaaatctacatatttgagacctttaataaaatactatataagcaacttcttttttttagttaaaactatataagcaacttctttaattaaattactag |
32769465 |
T |
|
| Q |
201 |
aggtatatatagatttgaaaagt |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
32769466 |
aggtatatatagatttgaaaagt |
32769488 |
T |
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