View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0734_low_40 (Length: 238)
Name: NF0734_low_40
Description: NF0734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0734_low_40 |
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Alignment Details
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 47245699 - 47245534
Alignment:
| Q |
5 |
atgattcaccttaagagataaatttcttgcacaaatatgttaattgaagatctaattgcacattcatgactttgattcctaaagcggttagcccgcataa |
104 |
Q |
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| T |
47245699 |
atgattcaccttaagagataaatttcttgcacaaatatgttaattgaagatctaattgcgcattcatgactttgattcctaaagcggttagcccgcataa |
47245600 |
T |
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| Q |
105 |
gttatcagattttcaactgattccttcattagttgtatttatatattcatttcatctcactcgacc |
170 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||| || |||| |||||| |||||| |
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| T |
47245599 |
gttatcagattttcaactgattccatcattagttgtatttatatgtttatttaatctcattcgacc |
47245534 |
T |
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