View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0734_low_46 (Length: 206)
Name: NF0734_low_46
Description: NF0734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0734_low_46 |
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Alignment Details
Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 44693329 - 44693228
Alignment:
| Q |
8 |
gagacggaatcaaccccgaaaaccagacaaccagcgaaggaaaaccagacagaaaacgataccttcagcagacaaaccaaacagcacaaaaacaactatc |
107 |
Q |
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| T |
44693329 |
gagacggaatcaaccccgaaaaccagacaactagcgaaggaaaaccagacagaaaacgataccttcagcagacaaaccaaacagcacaaaaacaactatc |
44693230 |
T |
|
| Q |
108 |
tc |
109 |
Q |
| |
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|| |
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| T |
44693229 |
tc |
44693228 |
T |
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