View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0735_high_9 (Length: 422)
Name: NF0735_high_9
Description: NF0735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0735_high_9 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 115 - 422
Target Start/End: Original strand, 1063871 - 1064175
Alignment:
| Q |
115 |
acattattaaacaagtgtatataaggggtgttcaaatattaatgttgttagtaattcatgggtgttcaattaatactatacttcaagaggaatcacattc |
214 |
Q |
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| T |
1063871 |
acattattaaacaagtgtatataaggggtgttcaaatatcaatgttgttagtaattcatgggtgttcaa---atactatacttcaagaggaatcacattc |
1063967 |
T |
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| Q |
215 |
atgagggtctgcccagagacttgtccatgtgagttttgtttatttgcaatgttttagaaattgagtcaaacatcaaactaataaggcatttggatcatgt |
314 |
Q |
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| T |
1063968 |
atgagggtctgcccagagacttgtccacgtgagttttgtttctttgcaatgttttagaaattgagtcaaacatcaaactaacaaggcatttggatcatgt |
1064067 |
T |
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| Q |
315 |
tcaacgactttaatccatatgaaatgagacaaaattgtagtcaaaattgttttaataaacaaattgcagatcatgctagttcaagattaaactaattgaa |
414 |
Q |
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| T |
1064068 |
tcaacgactttaatccatataaaatgagacaaaattgtagtcaaaattgttttaataaacaaattgcagatcatgctagttcaagattaaactaattgaa |
1064167 |
T |
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| Q |
415 |
ctgtggtt |
422 |
Q |
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| T |
1064168 |
ctgtggtt |
1064175 |
T |
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