View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0735_low_42 (Length: 276)

Name: NF0735_low_42
Description: NF0735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0735_low_42
NF0735_low_42
[»] chr8 (30 HSPs)
chr8 (73-247)||(23885905-23886079)
chr8 (73-204)||(23883421-23883552)
chr8 (73-276)||(20878908-20879132)
chr8 (199-255)||(12037740-12037796)
chr8 (73-161)||(22310236-22310324)
chr8 (207-255)||(23883574-23883622)
chr8 (114-193)||(38989073-38989152)
chr8 (114-193)||(39020170-39020249)
chr8 (115-193)||(12037821-12037899)
chr8 (130-201)||(22474375-22474446)
chr8 (200-238)||(21677037-21677075)
chr8 (209-259)||(22318489-22318539)
chr8 (209-255)||(45470996-45471042)
chr8 (109-193)||(5761136-5761220)
chr8 (109-193)||(19140368-19140452)
chr8 (211-255)||(31723147-31723191)
chr8 (114-193)||(22207875-22207954)
chr8 (114-193)||(26454319-26454398)
chr8 (114-193)||(36732889-36732968)
chr8 (127-193)||(4483840-4483906)
chr8 (114-192)||(16198442-16198520)
chr8 (209-255)||(17218056-17218102)
chr8 (209-255)||(17907506-17907552)
chr8 (209-255)||(23947667-23947713)
chr8 (114-192)||(36305266-36305344)
chr8 (209-255)||(36727692-36727738)
chr8 (209-254)||(9628-9673)
chr8 (116-193)||(18834081-18834158)
chr8 (114-186)||(22258676-22258748)
chr8 (109-193)||(39936376-39936460)
[»] chr3 (52 HSPs)
chr3 (73-255)||(3527762-3527962)
chr3 (76-204)||(48630696-48630824)
chr3 (91-255)||(12917918-12918101)
chr3 (73-193)||(12540825-12540945)
chr3 (92-204)||(45804002-45804114)
chr3 (73-276)||(15025647-15025869)
chr3 (73-192)||(12151353-12151472)
chr3 (76-193)||(3161286-3161403)
chr3 (73-192)||(29907058-29907177)
chr3 (73-192)||(29948224-29948343)
chr3 (73-192)||(29997378-29997497)
chr3 (109-204)||(21846037-21846132)
chr3 (109-204)||(48044101-48044196)
chr3 (109-202)||(25201470-25201563)
chr3 (114-204)||(6156313-6156403)
chr3 (110-196)||(15931869-15931955)
chr3 (73-161)||(12155430-12155518)
chr3 (109-193)||(11259033-11259117)
chr3 (109-193)||(17685208-17685292)
chr3 (109-193)||(22763995-22764079)
chr3 (114-193)||(15465702-15465781)
chr3 (114-193)||(24546448-24546527)
chr3 (197-255)||(29907201-29907259)
chr3 (197-255)||(29948367-29948425)
chr3 (197-255)||(29997521-29997579)
chr3 (116-193)||(17207950-17208027)
chr3 (76-204)||(3264856-3264984)
chr3 (109-193)||(10563312-10563396)
chr3 (129-201)||(12305685-12305757)
chr3 (109-193)||(12511451-12511535)
chr3 (116-192)||(18739505-18739581)
chr3 (109-193)||(35064946-35065030)
chr3 (109-193)||(35354205-35354289)
chr3 (109-193)||(40807599-40807683)
chr3 (109-193)||(40812436-40812520)
chr3 (109-201)||(43889156-43889248)
chr3 (114-193)||(5206019-5206098)
chr3 (114-201)||(5223931-5224018)
chr3 (114-201)||(9533737-9533824)
chr3 (114-201)||(10541815-10541902)
chr3 (114-193)||(14519870-14519949)
chr3 (212-255)||(16044841-16044884)
chr3 (76-151)||(36527895-36527970)
chr3 (109-191)||(2841830-2841912)
chr3 (196-238)||(3161222-3161264)
chr3 (209-255)||(11886209-11886255)
chr3 (209-255)||(14250661-14250707)
chr3 (129-201)||(3803458-3803530)
chr3 (109-193)||(5215250-5215334)
chr3 (109-193)||(17044569-17044653)
chr3 (132-192)||(40039710-40039770)
chr3 (109-193)||(54875848-54875932)
[»] chr7 (40 HSPs)
chr7 (73-204)||(8931444-8931575)
chr7 (89-255)||(33556653-33556838)
chr7 (73-204)||(13316714-13316845)
chr7 (89-247)||(36301251-36301428)
chr7 (92-255)||(38294870-38295052)
chr7 (73-204)||(33059735-33059866)
chr7 (76-204)||(42566460-42566589)
chr7 (73-192)||(18985098-18985217)
chr7 (73-192)||(18999726-18999845)
chr7 (197-255)||(18570192-18570250)
chr7 (76-204)||(18570052-18570180)
chr7 (196-255)||(13316644-13316703)
chr7 (197-255)||(8931374-8931432)
chr7 (114-193)||(1856765-1856844)
chr7 (114-193)||(13917938-13918017)
chr7 (114-193)||(16462644-16462723)
chr7 (114-201)||(32160559-32160646)
chr7 (209-259)||(13132901-13132951)
chr7 (209-255)||(15096223-15096269)
chr7 (132-201)||(19282718-19282787)
chr7 (129-201)||(11303810-11303882)
chr7 (109-193)||(12371878-12371962)
chr7 (109-193)||(12465625-12465709)
chr7 (129-201)||(29797173-29797245)
chr7 (129-201)||(29800992-29801064)
chr7 (109-193)||(36685614-36685698)
chr7 (76-151)||(11309687-11309762)
chr7 (114-193)||(14566610-14566689)
chr7 (114-193)||(16550369-16550448)
chr7 (114-193)||(16615214-16615293)
chr7 (209-255)||(4071193-4071239)
chr7 (209-255)||(14219551-14219597)
chr7 (114-192)||(18431259-18431337)
chr7 (131-201)||(23664480-23664550)
chr7 (209-255)||(36705206-36705252)
chr7 (210-255)||(8135661-8135705)
chr7 (132-201)||(16108216-16108285)
chr7 (109-193)||(8851524-8851608)
chr7 (109-201)||(11067071-11067163)
chr7 (129-193)||(37539031-37539095)
[»] chr2 (25 HSPs)
chr2 (73-204)||(19196429-19196560)
chr2 (76-204)||(19646480-19646606)
chr2 (73-193)||(14183757-14183877)
chr2 (73-203)||(45527796-45527926)
chr2 (73-193)||(14180019-14180139)
chr2 (73-191)||(20006661-20006779)
chr2 (208-255)||(19196359-19196406)
chr2 (77-150)||(19819647-19819720)
chr2 (114-201)||(23968980-23969067)
chr2 (210-259)||(18390863-18390912)
chr2 (89-186)||(23799589-23799686)
chr2 (114-193)||(9785190-9785269)
chr2 (129-201)||(10684290-10684362)
chr2 (129-201)||(20261782-20261854)
chr2 (198-238)||(45527940-45527980)
chr2 (114-193)||(18358334-18358413)
chr2 (114-193)||(21081336-21081415)
chr2 (114-193)||(22694884-22694963)
chr2 (200-255)||(23799719-23799774)
chr2 (114-201)||(41301330-41301417)
chr2 (209-255)||(3539208-3539254)
chr2 (196-238)||(20006596-20006638)
chr2 (209-255)||(25045472-25045518)
chr2 (109-193)||(9975532-9975616)
chr2 (109-193)||(24781205-24781289)
[»] chr1 (16 HSPs)
chr1 (73-255)||(35893495-35893696)
chr1 (73-204)||(21190022-21190153)
chr1 (94-161)||(21244424-21244491)
chr1 (196-255)||(21244311-21244370)
chr1 (109-193)||(4596210-4596294)
chr1 (76-204)||(10812915-10813043)
chr1 (109-193)||(20633999-20634083)
chr1 (109-193)||(42912653-42912737)
chr1 (114-193)||(12710496-12710575)
chr1 (114-193)||(17902127-17902206)
chr1 (130-201)||(46198082-46198153)
chr1 (109-191)||(20588282-20588364)
chr1 (109-191)||(20592820-20592902)
chr1 (131-193)||(45496571-45496633)
chr1 (197-238)||(21189969-21190010)
chr1 (129-193)||(1643216-1643280)
[»] chr6 (20 HSPs)
chr6 (77-254)||(1818203-1818398)
chr6 (89-255)||(10445481-10445665)
chr6 (73-192)||(30674066-30674185)
chr6 (114-193)||(25921337-25921416)
chr6 (115-193)||(23655948-23656026)
chr6 (76-192)||(18452223-18452339)
chr6 (109-201)||(32259449-32259541)
chr6 (114-193)||(15173820-15173899)
chr6 (114-193)||(23415512-23415591)
chr6 (114-201)||(25601634-25601721)
chr6 (209-254)||(23501095-23501140)
chr6 (129-201)||(12942752-12942824)
chr6 (109-193)||(15891076-15891160)
chr6 (109-193)||(17318487-17318571)
chr6 (129-201)||(28288864-28288936)
chr6 (114-201)||(13764954-13765041)
chr6 (222-255)||(17229690-17229723)
chr6 (210-255)||(31735461-31735506)
chr6 (109-193)||(19655594-19655678)
chr6 (109-193)||(27125841-27125925)
[»] chr4 (23 HSPs)
chr4 (73-204)||(14476906-14477037)
chr4 (89-255)||(9621773-9621958)
chr4 (109-193)||(10272957-10273041)
chr4 (73-192)||(13164657-13164779)
chr4 (114-201)||(19566276-19566363)
chr4 (114-204)||(55582799-55582889)
chr4 (109-201)||(14549229-14549321)
chr4 (114-201)||(10237855-10237942)
chr4 (114-193)||(16998133-16998212)
chr4 (114-193)||(26445492-26445571)
chr4 (114-192)||(10694613-10694691)
chr4 (114-192)||(10908379-10908457)
chr4 (116-193)||(15008576-15008653)
chr4 (129-201)||(15534744-15534816)
chr4 (109-193)||(25091256-25091340)
chr4 (129-201)||(36038433-36038505)
chr4 (109-193)||(37019272-37019356)
chr4 (114-193)||(14630434-14630513)
chr4 (114-201)||(14873614-14873701)
chr4 (196-237)||(14477048-14477089)
chr4 (129-193)||(25513365-25513429)
chr4 (114-201)||(40229911-40229999)
chr4 (109-193)||(53630838-53630922)
[»] scaffold0205 (3 HSPs)
scaffold0205 (73-181)||(6312-6420)
scaffold0205 (208-273)||(6202-6267)
scaffold0205 (127-193)||(30233-30299)
[»] scaffold0004 (3 HSPs)
scaffold0004 (73-193)||(65441-65561)
scaffold0004 (73-192)||(74908-75027)
scaffold0004 (209-255)||(109633-109679)
[»] scaffold0100 (2 HSPs)
scaffold0100 (73-192)||(9840-9959)
scaffold0100 (73-185)||(27288-27400)
[»] scaffold0394 (1 HSPs)
scaffold0394 (76-161)||(7949-8034)
[»] scaffold0148 (2 HSPs)
scaffold0148 (76-204)||(8338-8466)
scaffold0148 (204-261)||(8485-8542)
[»] scaffold1102 (1 HSPs)
scaffold1102 (73-192)||(2532-2651)
[»] chr5 (18 HSPs)
chr5 (73-192)||(21403887-21404006)
chr5 (109-204)||(20312557-20312652)
chr5 (200-276)||(21503531-21503607)
chr5 (73-141)||(26765674-26765742)
chr5 (114-193)||(8833572-8833651)
chr5 (114-201)||(14026165-14026252)
chr5 (114-193)||(17011334-17011413)
chr5 (209-254)||(29914742-29914787)
chr5 (130-193)||(263481-263544)
chr5 (114-201)||(8504226-8504313)
chr5 (114-201)||(9776713-9776800)
chr5 (114-193)||(16604969-16605048)
chr5 (114-201)||(39245683-39245770)
chr5 (114-192)||(1627747-1627825)
chr5 (209-255)||(20469663-20469709)
chr5 (214-255)||(21618579-21618620)
chr5 (116-193)||(26762011-26762088)
chr5 (129-201)||(32607682-32607754)
[»] scaffold0730 (2 HSPs)
scaffold0730 (76-204)||(7002-7128)
scaffold0730 (203-255)||(6932-6984)
[»] scaffold0007 (1 HSPs)
scaffold0007 (88-193)||(82755-82860)
[»] scaffold0174 (3 HSPs)
scaffold0174 (73-193)||(4452-4572)
scaffold0174 (73-193)||(15532-15652)
scaffold0174 (73-193)||(10574-10693)
[»] scaffold0017 (1 HSPs)
scaffold0017 (76-182)||(22935-23041)
[»] scaffold0217 (2 HSPs)
scaffold0217 (88-204)||(27996-28112)
scaffold0217 (196-236)||(28123-28163)
[»] scaffold0165 (1 HSPs)
scaffold0165 (73-192)||(31468-31587)
[»] scaffold1354 (1 HSPs)
scaffold1354 (196-254)||(185-243)
[»] scaffold0035 (2 HSPs)
scaffold0035 (208-272)||(44356-44420)
scaffold0035 (200-276)||(39670-39746)
[»] scaffold0104 (2 HSPs)
scaffold0104 (109-201)||(7822-7914)
scaffold0104 (109-201)||(14453-14545)
[»] scaffold0058 (3 HSPs)
scaffold0058 (117-203)||(60322-60408)
scaffold0058 (196-238)||(60268-60310)
scaffold0058 (114-193)||(6066-6145)
[»] scaffold0028 (1 HSPs)
scaffold0028 (199-259)||(3622-3682)
[»] scaffold0285 (1 HSPs)
scaffold0285 (196-247)||(19168-19219)
[»] scaffold0117 (1 HSPs)
scaffold0117 (114-193)||(42301-42380)
[»] scaffold0008 (1 HSPs)
scaffold0008 (116-193)||(11872-11949)
[»] scaffold0293 (1 HSPs)
scaffold0293 (129-193)||(19624-19688)
[»] scaffold0064 (1 HSPs)
scaffold0064 (109-193)||(58351-58435)
[»] scaffold0061 (2 HSPs)
scaffold0061 (109-201)||(14943-15035)
scaffold0061 (109-201)||(24001-24093)
[»] scaffold0436 (1 HSPs)
scaffold0436 (114-193)||(8566-8645)
[»] scaffold0021 (1 HSPs)
scaffold0021 (114-193)||(169046-169125)
[»] scaffold0371 (1 HSPs)
scaffold0371 (114-196)||(10809-10891)
[»] scaffold0112 (1 HSPs)
scaffold0112 (114-192)||(23570-23648)
[»] scaffold0046 (1 HSPs)
scaffold0046 (127-201)||(22126-22200)
[»] scaffold0003 (1 HSPs)
scaffold0003 (209-255)||(95754-95800)
[»] scaffold0462 (1 HSPs)
scaffold0462 (116-193)||(10831-10908)
[»] scaffold0162 (1 HSPs)
scaffold0162 (116-193)||(24428-24505)
[»] scaffold1633 (1 HSPs)
scaffold1633 (109-193)||(808-892)
[»] scaffold0232 (1 HSPs)
scaffold0232 (129-193)||(3893-3957)
[»] scaffold0151 (1 HSPs)
scaffold0151 (211-255)||(30488-30532)
[»] scaffold0047 (1 HSPs)
scaffold0047 (109-193)||(78667-78751)
[»] scaffold0515 (1 HSPs)
scaffold0515 (114-193)||(4642-4721)
[»] scaffold0439 (1 HSPs)
scaffold0439 (114-193)||(4028-4107)
[»] scaffold0306 (1 HSPs)
scaffold0306 (114-193)||(4642-4721)
[»] scaffold0216 (1 HSPs)
scaffold0216 (114-193)||(21863-21942)
[»] scaffold0051 (1 HSPs)
scaffold0051 (114-193)||(64434-64513)
[»] scaffold0005 (1 HSPs)
scaffold0005 (114-193)||(186870-186949)
[»] scaffold0445 (1 HSPs)
scaffold0445 (209-255)||(2469-2515)
[»] scaffold0321 (1 HSPs)
scaffold0321 (209-255)||(540-586)
[»] scaffold0251 (1 HSPs)
scaffold0251 (209-255)||(20562-20608)
[»] scaffold0020 (1 HSPs)
scaffold0020 (127-201)||(143234-143308)
[»] scaffold0334 (1 HSPs)
scaffold0334 (116-193)||(126-203)
[»] scaffold0080 (1 HSPs)
scaffold0080 (116-193)||(22156-22233)
[»] scaffold0026 (1 HSPs)
scaffold0026 (116-193)||(21691-21768)
[»] scaffold0077 (1 HSPs)
scaffold0077 (109-193)||(33942-34026)
[»] scaffold0001 (2 HSPs)
scaffold0001 (129-193)||(169062-169126)
scaffold0001 (129-193)||(176415-176479)


Alignment Details
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 73 - 247
Target Start/End: Original strand, 23885905 - 23886079
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23885905 ttcgtaaaaacataataaattatccacaaaaggttttcacgtcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacactaa 23886004  T
Q  173 agaccaactcaaaacagaaacatgcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctact 247  Q
    |||| ||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23886005 agactaactcaaactagaaacgtgcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctact 23886079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 23883421 - 23883552
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||    
T  23883421 ttcgtaaaaacataataaattatccacaaaaggttatcacgtcaaaccaaggctactggaaaaataactcaattatcaataattttcatatttacactaa 23883520  T
Q  173 agaccaactcaaaacagaaacatgcgaaacag 204  Q
    ||  ||||||||||||||||| ||||||||||    
T  23883521 agggcaactcaaaacagaaacgtgcgaaacag 23883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 73 - 276
Target Start/End: Original strand, 20878908 - 20879132
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaa-agataacacaattatcaataattttcatacttacacaa 171  Q
    |||||||||||||| ||||||||||||||||| || |||| |||||||||||||||||||| |||||||| |||||||||||| ||| ||  ||| || |    
T  20878908 ttcgtaaaaacatattaaattatccacaaaagattttcacgtcaaaccaaggctactggaagagataacataattatcaataacttttatgtttatacta 20879007  T
Q  172 aagaccaactcaaaacagaaacatgcg--------------------aaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgct 251  Q
    ||| ||| |||||||||||||| || |                    |||||||| ||||||||||| |||| ||| |||||||||||||||||||||||    
T  20879008 aaggccagctcaaaacagaaacgtgtgaaacagacgcaagaacccgaaaacagggtagactgccactaaacagctcacgaggcgagccaatctactcgct 20879107  T
Q  252 atggtgagctccacctatgaaccac 276  Q
    ||||||||||| |||||||||||||    
T  20879108 atggtgagctcaacctatgaaccac 20879132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 12037796 - 12037740
Alignment:
Q  199 aaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12037796 aaacagggcagactgccactgaacaactcgcgaggcgagccactctactcgctatgg 12037740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 22310324 - 22310236
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcat 161  Q
    |||||||||||||  ||||||||||||||||| || |||  |||||||||| ||||||||||||||||||||||||||| || ||||||    
T  22310324 ttcgtaaaaacatgttaaattatccacaaaagattttcatgtcaaaccaagactactggaaagataacacaattatcaacaactttcat 22310236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 23883574 - 23883622
Alignment:
Q  207 cagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  23883574 cagactgccactaaacaactcgcgaggtgagccaatctactcgctatgg 23883622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 38989073 - 38989152
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | |||||||||  |||||| |||| |||| |||||||||||||    
T  38989073 tcaaaccaaagccactggaaagctaacacaattatctacaattttcatgtttacaccaaaggccaattcaaaacagaaac 38989152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 39020170 - 39020249
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | |||||||||  |||||| |||| |||| |||||||||||||    
T  39020170 tcaaaccaaagccactggaaagctaacacaattatctacaattttcatgtttacaccaaaggccaattcaaaacagaaac 39020249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 12037899 - 12037821
Alignment:
Q  115 caaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||||||  ||| || ||||||||||||||| |||||||    
T  12037899 caaaccaagactactggaaagataatacaattatcagcaactttcatgtttataccaaagaccaactcaaagcagaaac 12037821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 22474375 - 22474446
Alignment:
Q  130 ggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||||| ||||||||||||| | || |||||| ||||||| |||| |||| |||||||||||||||| ||||    
T  22474375 ggaaagctaacacaattatctacaactttcatgcttacactaaaggccaattcaaaacagaaacatgtgaaa 22474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 21677075 - 21677037
Alignment:
Q  200 aacagggcagactgccactgaacaactcgcgaggcgagc 238  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  21677075 aacatggcagactgccactgaacaactcgcgaggcgagc 21677037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 22318539 - 22318489
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatggtgag 259  Q
    ||||||||||||  |||||||||||||||||| |||||| |||||||||||    
T  22318539 gactgccactgagtaactcgcgaggcgagccactctactagctatggtgag 22318489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 45471042 - 45470996
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||    
T  45471042 gactgccactgagtaactcgcgaggcgagccactctactcgctatgg 45470996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 5761136 - 5761220
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  5761136 tcacgtcaaaccaaagccactggaaagctaactcaattatcgacaactttcatgtttacaccaaaggccaattcaaaacagaaac 5761220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 19140368 - 19140452
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  19140368 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 19140452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 31723191 - 31723147
Alignment:
Q  211 ctgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||    
T  31723191 ctgccactgagtaactcgcgaggcgagccactctactcgctatgg 31723147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 22207875 - 22207954
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||  | || ||||||  |||||| |||| |||| |||||||||||||    
T  22207875 tcaaaccaaagccactggaaagctaacacaattatttacaactttcatgtttacaccaaaggccaattcaaaacagaaac 22207954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 26454319 - 26454398
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||  |||| |||||||||||||    
T  26454319 tcaaaccaatgccactggaaagctaacacaattatctacaactttcatgtttacaccaaaagccaattcaaaacagaaac 26454398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 36732968 - 36732889
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  36732968 tcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 36732889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 4483840 - 4483906
Alignment:
Q  127 actggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| ||||||||||||| | || ||||||  |||||| |||||| || |||||||||||||    
T  4483840 actggaaagctaacacaattatctacaactttcatgtttacactaaagactaattcaaaacagaaac 4483906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 16198442 - 16198520
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaa 192  Q
    ||||||||| || ||||||||| ||||||||||||  | || ||||||  |||||| |||| |||| ||||||||||||    
T  16198442 tcaaaccaaagccactggaaagctaacacaattatatacaactttcatgtttacaccaaaggccaattcaaaacagaaa 16198520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 17218056 - 17218102
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||||||||||| ||||||||| ||||    
T  17218056 gactgccactgagtaactcgcgaggcgagccactctactcgcgatgg 17218102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 17907552 - 17907506
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||| ||||||| ||||||||||||||    
T  17907552 gactgccactgagtaactcgcgagccgagccactctactcgctatgg 17907506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 23947667 - 23947713
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||   ||||||||||||||||| ||||||||||||||    
T  23947667 gactgccactgagttactcgcgaggcgagccactctactcgctatgg 23947713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 36305266 - 36305344
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaa 192  Q
    |||||| || || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| ||||||||||||    
T  36305266 tcaaactaaagccactggaaagctaacacaattatctaaaactttcatgtttacaccaaaggccaaatcaaaacagaaa 36305344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 36727738 - 36727692
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||| ||||||  |||||||||||||||||| ||||||||||||||    
T  36727738 gactgtcactgagtaactcgcgaggcgagccactctactcgctatgg 36727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 9628 - 9673
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatg 254  Q
    ||||||||||||  | |||||||||||||||| |||||||||||||    
T  9628 gactgccactgagtagctcgcgaggcgagccactctactcgctatg 9673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 18834081 - 18834158
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| || |||| |||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  18834081 aaaccaaagccactgaaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 18834158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 22258748 - 22258676
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaa 186  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| ||||||    
T  22258748 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaa 22258676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 39936460 - 39936376
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || || |||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  39936460 tcacgtcaaaccaaagccaccggaaagctaactcaattatctacaactttcatgtttacactaaaggccaattcaaaacagaaac 39936376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 73 - 255
Target Start/End: Complemental strand, 3527962 - 3527762
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||  |    
T  3527962 ttcgtaaaaacataataaattatccacaaaaggttttcacgtcaaaccaaggctattggaaagataacacaattatcaataattttcatatttacac-ca 3527864  T
Q  173 agaccaactcaaaacagaaacatg-------------------cgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctat 253  Q
    || ||||||||||||| |||| ||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3527863 aggccaactcaaaacataaacgtgtgaaacacacgcaagaacacgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctat 3527764  T
Q  254 gg 255  Q
    ||    
T  3527763 gg 3527762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 48630696 - 48630824
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    ||||||||||| ||||||||||||||||| || |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| ||||     
T  48630696 gtaaaaacatattaaattatccacaaaagtttttcacgtcaaaccaaggctactgaaaagataacacaattatcaataactttcatgtttacactaaagg 48630795  T
Q  176 ccaactcaaaacagaaacatgcgaaacag 204  Q
     ||||||||||||||||| || |||||||    
T  48630796 tcaactcaaaacagaaacgtgtgaaacag 48630824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 91 - 255
Target Start/End: Complemental strand, 12918101 - 12917918
Alignment:
Q  91 attatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacaga 190  Q
    |||||||||||||| || |||  |||||||||||||||| | |||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||    
T  12918101 attatccacaaaagattttcatgtcaaaccaaggctactagcaagataacacaattatcaataactttcatatttacactaaaggccaactcaaaacaga 12918002  T
Q  191 aac-------------------atgcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||                   | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12918001 aacgtgtgaaacagacgcaagaacgcgaaacagagcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 12917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 12540825 - 12540945
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||| || |||  |||| ||||||||| |||||||||||||||||||||||||| ||||||  ||| |||||    
T  12540825 ttcgtaaaaacatattaaattatccacaaaagattttcatgtcaacccaaggctattggaaagataacacaattatcaataactttcatgtttatacaaa 12540924  T
Q  173 agaccaactcaaaacagaaac 193  Q
    |||| || |||||||||||||    
T  12540925 agactaattcaaaacagaaac 12540945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 45804114 - 45804002
Alignment:
Q  92 ttatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaa 191  Q
    ||||||||||||| || |||  ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||  |||||||||||||||    
T  45804114 ttatccacaaaagattttcatgtcaaaccaaggctactggaaagataacacaattataaataactttcatatttacactaaaggtcaactcaaaacagaa 45804015  T
Q  192 acatgcgaaacag 204  Q
    || ||||||||||    
T  45804014 acgtgcgaaacag 45804002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 276
Target Start/End: Complemental strand, 15025869 - 15025647
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||||||||||||| | ||||  || |||   ||||||||| ||||||||||||||||||||||||||| || ||||||  ||| || ||    
T  15025869 ttcgtaaaaacataataaattatcgaaaaaatattttcatgccaaaccaagactactggaaagataacacaattatcaacaactttcatgtttataccaa 15025770  T
Q  173 agaccaactcaaaacagaaac-------------------atgcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctat 253  Q
    ||||||| |||||||||||||                   || ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  15025769 agaccaattcaaaacagaaacgtatgaaacagacgcaagaatacgaaatagggcaggctgccactgaacaactcgcgaggcgagccattctactcgctat 15025670  T
Q  254 ggtgagctccacctatgaaccac 276  Q
    || ||| || || |||| |||||    
T  15025669 ggcgagttcaacttatggaccac 15025647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 12151472 - 12151353
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||| ||||||||| ||||||||||||||||| || |||| ||||| |||||||||| ||||||||||||||||||||| || ||||||  |||||| ||    
T  12151472 ttcgaaaaaacatattaaattatccacaaaagattttcacgtcaaagcaaggctactagaaagataacacaattatcaacaactttcatgtttacaccaa 12151373  T
Q  173 agaccaactcaaaacagaaa 192  Q
    ||  ||| ||||||||||||    
T  12151372 aggtcaaatcaaaacagaaa 12151353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 3161403 - 3161286
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    ||||||||||  ||||||||||||||||| || |||  |||||||||| |||||||||||| |||||| ||||||| ||| |||||  |||||| |||||    
T  3161403 gtaaaaacatgttaaattatccacaaaagattttcatgtcaaaccaagactactggaaagacaacacagttatcaacaatattcatgtttacactaaaga 3161304  T
Q  176 ccaactcaaaacagaaac 193  Q
    |||||| |||||||||||    
T  3161303 ccaacttaaaacagaaac 3161286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 29907058 - 29907177
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||| || |||  |||||| || |||||||||||||||||||||||||||  || ||||||  ||| |||||    
T  29907058 ttcgtaaaaacatattaaattatccacaaaagattttcaggtcaaacaaaagctactggaaagataacacaattatcagcaactttcatgtttatacaaa 29907157  T
Q  173 agaccaactcaaaacagaaa 192  Q
    |||| || |||||| |||||    
T  29907158 agactaattcaaaatagaaa 29907177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 29948224 - 29948343
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||| || |||  |||||| || |||||||||||||||||||||||||||  || ||||||  ||| |||||    
T  29948224 ttcgtaaaaacatattaaattatccacaaaagattttcaggtcaaacaaaagctactggaaagataacacaattatcagcaactttcatgtttatacaaa 29948323  T
Q  173 agaccaactcaaaacagaaa 192  Q
    |||| || |||||| |||||    
T  29948324 agactaattcaaaatagaaa 29948343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 29997378 - 29997497
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||| || |||  |||||| || |||||||||||||||||||||||||||  || ||||||  ||| |||||    
T  29997378 ttcgtaaaaacatattaaattatccacaaaagattttcaggtcaaacaaaagctactggaaagataacacaattatcagcaactttcatgtttatacaaa 29997477  T
Q  173 agaccaactcaaaacagaaa 192  Q
    |||| || |||||| |||||    
T  29997478 agactaattcaaaatagaaa 29997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 21846132 - 21846037
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaacag 204  Q
    |||||||||| ||||  |||||||||||||||||||||||||| || ||||||  ||||||  |||||||||||||||||||||| || |||||||    
T  21846132 tcacatcaaatcaagaatactggaaagataacacaattatcaacaactttcatgtttacaccgaagaccaactcaaaacagaaacgtgtgaaacag 21846037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 48044196 - 48044101
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaacag 204  Q
    ||||||||||||||| || |||||||||||||||||||||||| || ||||||  ||||||  |||| ||||||||||||||||| || |||||||    
T  48044196 tcacatcaaaccaagactgctggaaagataacacaattatcaacaactttcatgtttacaccgaagatcaactcaaaacagaaacgtgtgaaacag 48044101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 25201470 - 25201563
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaac 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || ||||||  ||||||  || |||||||||||| |||||| || |||||    
T  25201470 tcacatcaaaccaagactactggaaagataacacaattatcaacaactttcatgtttacaccgaaaaccaactcaaaatagaaacgtgtgaaac 25201563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 6156313 - 6156403
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaacag 204  Q
    ||||||||| || ||||||||| ||||||||||||| | ||||| |||  |||||| ||||||||| ||||||||||||| ||||||||||    
T  6156313 tcaaaccaacgccactggaaagctaacacaattatctaaaatttccatgtttacaccaaagaccaattcaaaacagaaacgtgcgaaacag 6156403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 15931955 - 15931869
Alignment:
Q  110 cacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatg 196  Q
    |||||||||||||||| ||||||||| |||| |||||||| |||| ||||||  |||||| |||| |||| ||||||||||||||||    
T  15931955 cacatcaaaccaaggccactggaaagctaactcaattatctataactttcatgtttacaccaaaggccaattcaaaacagaaacatg 15931869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 12155518 - 12155430
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcat 161  Q
    |||||||||||||| |||||||| |||||||  || |||  |||||||| || |||||||| ||||||||||||||||| || ||||||    
T  12155518 ttcgtaaaaacatattaaattattcacaaaatattttcatgtcaaaccacggttactggaaggataacacaattatcaacaactttcat 12155430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 11259033 - 11259117
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||||||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  11259033 tcacatcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 11259117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 17685292 - 17685208
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | |||||||||  |||||| |||| |||| |||||||||||||    
T  17685292 tcacgtcaaaccaacgccactggaaagctaactcaattatctacaattttcatgtttacaccaaaggccaattcaaaacagaaac 17685208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 22764079 - 22763995
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || |||| |||| |||| |||||||| |||| ||||||  |||||| ||||||||| |||||||||||||    
T  22764079 tcacgtcaaaccaaagccactgaaaagctaactcaattatctataactttcatgtttacaccaaagaccaattcaaaacagaaac 22763995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 15465702 - 15465781
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  15465702 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 15465781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 24546448 - 24546527
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  24546448 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 24546527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 29907201 - 29907259
Alignment:
Q  197 cgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||| |||||||| ||| ||||||||| |||||||||||  |||||||||||||    
T  29907201 cgaaacaggacagactgctactaaacaactcgtgaggcgagccagcctactcgctatgg 29907259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 29948367 - 29948425
Alignment:
Q  197 cgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||| |||||||| ||| ||||||||| |||||||||||  |||||||||||||    
T  29948367 cgaaacaggacagactgctactaaacaactcgtgaggcgagccagcctactcgctatgg 29948425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 29997521 - 29997579
Alignment:
Q  197 cgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||| |||||||| ||| ||||||||| |||||||||||  |||||||||||||    
T  29997521 cgaaacaggacagactgctactaaacaactcgtgaggcgagccagcctactcgctatgg 29997579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 17207950 - 17208027
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  17207950 aaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 17208027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 3264984 - 3264856
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    |||||| |||||||||||| |||||| |  || |||   |||||||| ||||||| ||||||| |||||||||||| |  ||||||  ||| || |||||    
T  3264984 gtaaaatcataataaattaaccacaacatattttcatgccaaaccaaagctactgaaaagatatcacaattatcaacatctttcatgtttataccaaaga 3264885  T
Q  176 ccaactcaaaacagaaacatgcgaaacag 204  Q
    | || ||| |||| ||||||| |||||||    
T  3264884 ctaattcagaacaaaaacatgtgaaacag 3264856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 10563312 - 10563396
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||||||||||||| || ||||||||| |||| ||||||||   || ||||||  |||||| |||| |||| |||||||||||||    
T  10563312 tcacatcaaaccaaagccactggaaagctaactcaattatctgcaactttcatgtttacaccaaaggccaattcaaaacagaaac 10563396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 12305685 - 12305757
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  12305685 tggaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 12305757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 12511451 - 12511535
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||||||||||||| || ||||||||  |||| |||||||| | || ||||||  |||||| |||||| || |||||||||||||    
T  12511451 tcacatcaaaccaaagccactggaaatctaactcaattatctacaactttcatgtttacaccaaagacaaattcaaaacagaaac 12511535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 18739505 - 18739581
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaa 192  Q
    ||||||| || | ||||||| ||||||||||||| | || ||||||  |||||| ||||||||| ||||||||||||    
T  18739505 aaaccaaagccattggaaagctaacacaattatctaaaactttcatgtttacaccaaagaccaattcaaaacagaaa 18739581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 35065030 - 35064946
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  35065030 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 35064946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 35354205 - 35354289
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  35354205 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 35354289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 40807599 - 40807683
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  40807599 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 40807683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 40812436 - 40812520
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  40812436 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 40812520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 43889248 - 43889156
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||  |||| |||| |||||||||||||||| ||||    
T  43889248 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacatcaaaggccaattcaaaacagaaacatgtgaaa 43889156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 5206098 - 5206019
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||  |||| |||||||| | || ||||||  |||||| ||||||||| |||||||||||||    
T  5206098 tcaaaccaaagccactggaaatctaactcaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaac 5206019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 5223931 - 5224018
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || ||||||||| |||||||| |||| | || ||||||  || ||| |||| |||| |||||||||||||||| ||||    
T  5223931 tcaaaccaaagccactggaaagctaacacaactatctacaactttcatgtttgcaccaaaggccaattcaaaacagaaacatgtgaaa 5224018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 9533737 - 9533824
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || | ||||||| ||||| ||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  9533737 tcaaaccaaagccattggaaagctaacaaaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 9533824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 10541902 - 10541815
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| | || ||||||||||||||||||||||| | || ||||||  |||||| |||| | || ||||||| |||||||| ||||    
T  10541902 tcaaaccgacgccactggaaagataacacaattatctacaactttcatgtttacaccaaaggctaattcaaaacggaaacatgtgaaa 10541815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 14519870 - 14519949
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| ||||  ||| |||||||||||||    
T  14519870 tcaaaccaatgccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggtcaattcaaaacagaaac 14519949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 16044841 - 16044884
Alignment:
Q  212 tgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||||||  |||||||||||||||||| ||||||||||||||    
T  16044841 tgccactgagtaactcgcgaggcgagccactctactcgctatgg 16044884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 36527895 - 36527970
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaa 151  Q
    |||||| |||||||||||| |||||| || ||  ||   |||||||| ||||||||||||||| ||||||||||||    
T  36527895 gtaaaatcataataaattaaccacaacagatttgcatgccaaaccaaagctactggaaagatatcacaattatcaa 36527970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 2841912 - 2841830
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaa 191  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||    
T  2841912 tcacgtcaaaccaaagccactggaaagctaactcaattatctaaaactttcatgtttacaccaaaggccaattcaaaacagaa 2841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 3161264 - 3161222
Alignment:
Q  196 gcgaaacagggcagactgccactgaacaactcgcgaggcgagc 238  Q
    |||||||||||||| |||||||||||||| ||| |||||||||    
T  3161264 gcgaaacagggcaggctgccactgaacaattcgtgaggcgagc 3161222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 11886255 - 11886209
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||| |||||||  |||||||||||||||||| ||||||||||||||    
T  11886255 gactaccactgagtaactcgcgaggcgagccactctactcgctatgg 11886209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 14250707 - 14250661
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  | |||||||||||||||| ||||||||||||||    
T  14250707 gactgccactgagtacctcgcgaggcgagccactctactcgctatgg 14250661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 3803458 - 3803530
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  3803458 tggaaagctaacaaaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 3803530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 5215250 - 5215334
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| || ||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  5215250 tcacgtcaaaccaaagccactggaaagctaactcatttatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 5215334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 17044569 - 17044653
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| |||||| || || ||||||||  |||| |||||||| |||| ||||||  |||||| |||| |||| |||||||||||||    
T  17044569 tcacgtcaaactaaagccactggaaatctaactcaattatctataaatttcatgtttacaccaaaggccaattcaaaacagaaac 17044653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 40039770 - 40039710
Alignment:
Q  132 aaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaa 192  Q
    |||||||||| ||||||| | || ||||||  |||||| ||||||||| ||||||||||||    
T  40039770 aaagataacaaaattatctaaaactttcatgtttacaccaaagaccaattcaaaacagaaa 40039710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 54875932 - 54875848
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| |||||||||  | ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  54875932 tcacgtcaaaccaactccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 54875848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 8931575 - 8931444
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||    
T  8931575 ttcgtaaaaacataataaattatccacaaaaagttttcacgtcaaaccaaggctactggagagataacacaattatcaataattttcatatttacactaa 8931476  T
Q  173 agaccaactcaaaacagaaacatgcgaaacag 204  Q
    |  |||||||||||||||||| ||||||||||    
T  8931475 atgccaactcaaaacagaaacgtgcgaaacag 8931444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 89 - 255
Target Start/End: Complemental strand, 33556838 - 33556653
Alignment:
Q  89 aaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaaca 188  Q
    |||||||||||||||| || |||  ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||    
T  33556838 aaattatccacaaaagattttcatgtcaaaccaaggctactggaaagataacacaattatcaataactttcatatttacactaaaggccaactcaaaaca 33556739  T
Q  189 gaaac-------------------atgcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||                   | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33556738 gaaacgtgtgaaatagacgcaagaacgcgaaacagggcagactgccaccgaacaactcgcgaggcgagccaatctactcgctatgg 33556653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 13316845 - 13316714
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || |||||   ||||||  |    
T  13316845 ttcgtaaaaacatataaaattatccacaaaaggttttcacatcaaaccaaggctactagaaagataacacaattatcaacaactttcacgtttacaccga 13316746  T
Q  173 agaccaactcaaaacagaaacatgcgaaacag 204  Q
    ||||||||||||||||||||| || |||||||    
T  13316745 agaccaactcaaaacagaaacgtgtgaaacag 13316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 36301428 - 36301251
Alignment:
Q  89 aaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaaca 188  Q
    |||||||||||||||| || |||  ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||  ||||||||||||    
T  36301428 aaattatccacaaaagattttcatgtcaaaccaaggctactggaaagataacacaattatcaataactttcatatttacactaaaggtcaactcaaaaca 36301329  T
Q  189 gaaacatg-------------------cgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctact 247  Q
    ||||| ||                   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36301328 gaaacgtgcgaaacacacgcaagaacacgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctact 36301251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 255
Target Start/End: Original strand, 38294870 - 38295052
Alignment:
Q  92 ttatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaa 191  Q
    ||||||||||||| || |||  ||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||  ||||||||||||||||    
T  38294870 ttatccacaaaagattttcatgtcaaaccaaggctactggaaatataacacaattatcaataactttcatatttacactaaatgccaactcaaaacagaa 38294969  T
Q  192 ac-------------------atgcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||                   ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38294970 acatgtgaaacagacgcaaaaatgtgaaacagggcagactgccactgaacaactcgcaaggcgagccaatctactcgctatgg 38295052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 33059735 - 33059866
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||||| || |||| |||||||||| |||||| ||||||||||||| |||||| || ||||||  |||||| ||    
T  33059735 ttcgtaaaaacatgttaaattatccacaaaagattttcacgtcaaaccaagactactgaaaagataacacaaatatcaacaactttcatgtttacaccaa 33059834  T
Q  173 agaccaactcaaaacagaaacatgcgaaacag 204  Q
    ||||||||||| ||||||||| || |||||||    
T  33059835 agaccaactcagaacagaaacgtgtgaaacag 33059866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 42566589 - 42566460
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatc-acatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaag 174  Q
    ||||||||||| ||||||||||||||||  || |  || |||||||||||||||||||||||||||||| ||||||| || ||||||  |||||| ||||    
T  42566589 gtaaaaacatattaaattatccacaaaatattttttacgtcaaaccaaggctactggaaagataacacagttatcaacaactttcatgtttacaccaaag 42566490  T
Q  175 accaactcaaaacagaaacatgcgaaacag 204  Q
    |||||||||||||| |||| || |||||||    
T  42566489 accaactcaaaacaaaaacgtgtgaaacag 42566460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 18985217 - 18985098
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||||| || |||  |||||||||| | ||||||||||||||||||||||||| || ||||||  |||||| ||    
T  18985217 ttcgtaaaaacatgttaaattatccacaaaagattttcatgtcaaaccaagaccactggaaagataacacaattatcaacaactttcatgtttacaccaa 18985118  T
Q  173 agaccaactcaaaacagaaa 192  Q
    ||  ||| ||||||||||||    
T  18985117 aggtcaaatcaaaacagaaa 18985098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 18999845 - 18999726
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||||| || |||  |||||||||| | ||||||||||||||||||||||||| || ||||||  |||||| ||    
T  18999845 ttcgtaaaaacatgttaaattatccacaaaagattttcatgtcaaaccaagaccactggaaagataacacaattatcaacaactttcatgtttacaccaa 18999746  T
Q  173 agaccaactcaaaacagaaa 192  Q
    ||  ||| ||||||||||||    
T  18999745 aggtcaaatcaaaacagaaa 18999726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 18570192 - 18570250
Alignment:
Q  197 cgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  18570192 cgaaacagggcagactgccactgaacaactcgtgaggcgagccaatctacttgctatgg 18570250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 18570052 - 18570180
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    ||||||||||| | |||||||| |||||| || |||| ||| ||||||||||||||||||||||||||  |||||| || ||||||  ||| |  |||||    
T  18570052 gtaaaaacatattgaattatcctcaaaagattttcacgtcataccaaggctactggaaagataacacagatatcaacaactttcatgtttatatcaaaga 18570151  T
Q  176 ccaactcaaaacagaaacatgcgaaacag 204  Q
    |||| | ||||||||||| | ||||||||    
T  18570152 ccaatttaaaacagaaacgtacgaaacag 18570180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 13316703 - 13316644
Alignment:
Q  196 gcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||    
T  13316703 gcgaaacagggcaggctgccaatgaacaactcgcgaggcgagccaatctactcgttatgg 13316644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 8931432 - 8931374
Alignment:
Q  197 cgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  8931432 cgaaacagggcagactgtcactgaacaacccgcgaggtgagccaatctactcgctatgg 8931374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 1856844 - 1856765
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  1856844 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 1856765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 13918017 - 13917938
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  13918017 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 13917938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 16462644 - 16462723
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  16462644 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 16462723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 32160646 - 32160559
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || ||||||||| ||| ||||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  32160646 tcaaaccaaagccactggaaagctaagacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 32160559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 13132951 - 13132901
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatggtgag 259  Q
    ||||||||||||  |||||||||||||||||| ||||||| ||||||||||    
T  13132951 gactgccactgagtaactcgcgaggcgagccactctactcactatggtgag 13132901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 15096269 - 15096223
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||    
T  15096269 gactgccactgagtaactcgcgaggcgagccactctactcgctatgg 15096223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 19282718 - 19282787
Alignment:
Q  132 aaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||| ||||||||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  19282718 aaagctaacacaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 19282787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 11303810 - 11303882
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  11303810 tggaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 11303882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 12371878 - 12371962
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  12371878 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 12371962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 12465709 - 12465625
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  12465709 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 12465625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 29797173 - 29797245
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  29797173 tggaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 29797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 29800992 - 29801064
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  29800992 tggaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 29801064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 36685698 - 36685614
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  36685698 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 36685614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 11309687 - 11309762
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaa 151  Q
    |||||| |||||||||||| |||||| || || |||   ||||||||  |||||||||||||| ||||||||||||    
T  11309687 gtaaaatcataataaattaaccacaacagattttcatgccaaaccaaatctactggaaagatatcacaattatcaa 11309762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 14566610 - 14566689
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || | ||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  14566610 tcaaaccaaagccattggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 14566689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 16550448 - 16550369
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||| ||||    
T  16550448 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacaaaaac 16550369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 16615214 - 16615293
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||| ||||    
T  16615214 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacaaaaac 16615293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 4071193 - 4071239
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||| ||  |||||||||||||||||| ||||||||||||||    
T  4071193 gactgccaccgagtaactcgcgaggcgagccactctactcgctatgg 4071239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 14219597 - 14219551
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||||||||||| | ||||||||||||    
T  14219597 gactgccactgagtaactcgcgaggcgagccactttactcgctatgg 14219551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 18431259 - 18431337
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaa 192  Q
    ||||||| | || ||||||||||||||||||||||| | || ||||||  |||||| |||| | || ||||||||||||    
T  18431259 tcaaaccgacgccactggaaagataacacaattatctacaactttcatgtttacaccaaaggctaattcaaaacagaaa 18431337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 23664550 - 23664480
Alignment:
Q  131 gaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  23664550 gaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 23664480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 36705252 - 36705206
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  | |||||||||||||||| ||||||||||||||    
T  36705252 gactgccactgagtagctcgcgaggcgagccactctactcgctatgg 36705206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 8135705 - 8135661
Alignment:
Q  210 actgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||||||||||||||||||||||||| | | |||||||||||||    
T  8135705 actgccactgaacaactcgcgaggcgag-ctagctactcgctatgg 8135661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 16108285 - 16108216
Alignment:
Q  132 aaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  16108285 aaaggtaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 16108216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 8851608 - 8851524
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||  |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  8851608 tcacgtcaaaccaaagccactggaaacctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 8851524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 11067071 - 11067163
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||| ||||| ||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||  |||| |||||||||||||||| ||||    
T  11067071 tcacgtcaaatcaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaagccaaatcaaaacagaaacatgtgaaa 11067163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 37539031 - 37539095
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| ||||| ||||||| | || ||||||  ||||||||||| |||| |||||||||||||    
T  37539031 tggaaagctaacaaaattatctaaaactttcatgtttacacaaaaggccaattcaaaacagaaac 37539095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 9e-45; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 19196560 - 19196429
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||    
T  19196560 ttcgtaaaaacataataaattttccacaaaaggttttcatgtcaaaccaaagctactggaaagataacacaattatcaataatttttatatttacactaa 19196461  T
Q  173 agaccaactcaaaacagaaacatgcgaaacag 204  Q
    || |||||||||||||||||| ||||||||||    
T  19196460 aggccaactcaaaacagaaacgtgcgaaacag 19196429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 19646480 - 19646606
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    ||||||||||| |||||||||||||| |  || |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||| ||||     
T  19646480 gtaaaaacatattaaattatccacaaga--ttttcacgtcaaaccaaggctgctggaaagataacacaattatcaataactttcatgtttacactaaagg 19646577  T
Q  176 ccaactcaaaacagaaacatgcgaaacag 204  Q
    |||||||||||||||||| || |||||||    
T  19646578 ccaactcaaaacagaaacgtgtgaaacag 19646606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 14183877 - 14183757
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||| ||||||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||||||||||||| || ||||||  ||| || ||    
T  14183877 ttcgtagaaacataataaattatccacaaaagattttcatgtcaaaccaagactactggaaagataacacaattatcaacaactttcatgtttataccaa 14183778  T
Q  173 agaccaactcaaaacagaaac 193  Q
    ||||||||||||| |||||||    
T  14183777 agaccaactcaaagcagaaac 14183757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 45527796 - 45527926
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||| | || |||| |||||||||| ||||||||||||||||||||||||||| || ||||||  ||| || ||    
T  45527796 ttcgtaaaaacatgttaaattatccacaaatgattttcacgtcaaaccaagactactggaaagataacacaattatcaacaactttcatgtttataccaa 45527895  T
Q  173 agaccaactcaaaacagaaacatgcgaaaca 203  Q
    |||||||||| |||||||||| || ||||||    
T  45527896 agaccaactccaaacagaaacgtgtgaaaca 45527926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 14180139 - 14180019
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||| ||||||||||||||||||||||||| || |||  |||||||||| |||| |||||||||||||||||||||| || ||||||  ||| |  ||    
T  14180139 ttcgtagaaacataataaattatccacaaaagattttcatgtcaaaccaagactaccggaaagataacacaattatcaacaactttcatgtttatatcaa 14180040  T
Q  173 agaccaactcaaaacagaaac 193  Q
    ||||||||||||| |||||||    
T  14180039 agaccaactcaaagcagaaac 14180019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 20006779 - 20006661
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||||| || || | |||||||||| ||||| ||||||||| |||||||| || || ||||||  |||||| ||    
T  20006779 ttcgtaaaaacatgttaaattatccacaaaagattttcccgtcaaaccaagactactagaaagataatacaattattaacaactttcatgtttacaccaa 20006680  T
Q  173 agaccaactcaaaacagaa 191  Q
    |||||||||||||||||||    
T  20006679 agaccaactcaaaacagaa 20006661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 19196406 - 19196359
Alignment:
Q  208 agactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19196406 agactgccactgaacaactcgcgaggcgagccaatctactcgccatgg 19196359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 19819647 - 19819720
Alignment:
Q  77 taaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatca 150  Q
    |||||||||  ||||||||||||||||| |  |||| |||||||||| ||||||||||| ||||||||||||||    
T  19819647 taaaaacatgttaaattatccacaaaagatattcacgtcaaaccaagactactggaaagttaacacaattatca 19819720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 23969067 - 23968980
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  23969067 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 23968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 18390912 - 18390863
Alignment:
Q  210 actgccactgaacaactcgcgaggcgagccaatctactcgctatggtgag 259  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  18390912 actgccactgagtaactcgcgaggcgagccactctactcgctatggtgag 18390863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 23799589 - 23799686
Alignment:
Q  89 aaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaa 186  Q
    |||||||||||||||  || |||  |||||||||||||| ||| |||||||||||||||||||||  ||||  | ||||||  ||| |||||||||||    
T  23799589 aaattatccacaaaatattttcatttcaaaccaaggctattgggaagataacacaattatcaatatctttcgaatttacacttaaggccaactcaaaa 23799686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 9785190 - 9785269
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||| ||||| ||||||||||||||| || ||||||  |||||| |||| | ||||||||||||||||    
T  9785190 tcaaaccaacgccacttgaaagctaacacaattatcaacaactttcatgtttacaccaaaggctaactcaaaacagaaac 9785269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 10684362 - 10684290
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  10684362 tggaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 10684290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 20261782 - 20261854
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  20261782 tggaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 20261854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 45527940 - 45527980
Alignment:
Q  198 gaaacagggcagactgccactgaacaactcgcgaggcgagc 238  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  45527940 gaaacagggcaggctgccactgaacaattcgcgaggcgagc 45527980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 18358413 - 18358334
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || |||| |||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  18358413 tcaaaccaaagccactgaaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 18358334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 21081415 - 21081336
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||| ||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  21081415 tcaaaccaaagccactagaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 21081336  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 22694884 - 22694963
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| |||||||||||||   || |||||| ||||||| |||| | || |||||||||||||    
T  22694884 tcaaaccaacgccactggaaagctaacacaattatctccaactttcatgcttacactaaaggctaattcaaaacagaaac 22694963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 23799719 - 23799774
Alignment:
Q  200 aacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||| ||||| || |||||||||||||| ||||||||||||||| |||| ||||||    
T  23799719 aacatggcagtctaccactgaacaactcacgaggcgagccaatcgactcactatgg 23799774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 41301417 - 41301330
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || | ||||||| ||||| ||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  41301417 tcaaaccaaagccattggaaagctaacaaaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 41301330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 3539208 - 3539254
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  ||||||| |||||||||| ||||||||||||||    
T  3539208 gactgccactgagtaactcgcaaggcgagccactctactcgctatgg 3539254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 20006638 - 20006596
Alignment:
Q  196 gcgaaacagggcagactgccactgaacaactcgcgaggcgagc 238  Q
    |||||||||||||  |||||||||||||| |||||||||||||    
T  20006638 gcgaaacagggcaagctgccactgaacaattcgcgaggcgagc 20006596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 25045472 - 25045518
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  | |||||||||||||||| ||||||||||||||    
T  25045472 gactgccactgagtagctcgcgaggcgagccactctactcgctatgg 25045518  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 9975532 - 9975616
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||  |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  9975532 tcacgtcaaaccaaagccactggaaaactaactcaattatctacaactttcatgtttacactaaaggccaattcaaaacagaaac 9975616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 24781289 - 24781205
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| ||||  ||| |||||||||||||    
T  24781289 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggtcaattcaaaacagaaac 24781205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 9e-45; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 255
Target Start/End: Original strand, 35893495 - 35893696
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| || ||    
T  35893495 ttcgtaaaaacatattaaattatccacaaaaggttttcacatcaaaccaaggctactggaaagataacacaattatcaacaactttcatatttataccaa 35893594  T
Q  173 agaccaactcaaaacagaaac-------------------atgcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctat 253  Q
    ||||||| | |||||||||||                   | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  35893595 agaccaatttaaaacagaaacgtatgaaacagacgcaagaacgcgaaacagggcagactgccactgaacaactcgcgagacgagccaatctactcgcgat 35893694  T
Q  254 gg 255  Q
    ||    
T  35893695 gg 35893696  T

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Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 21190153 - 21190022
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  || ||||||  |||||  ||    
T  21190153 ttcgtaaaaacatgttaaattatccacaaaagattatcacgtcaaaccaaggctactggaaagataacacaattatcatcaactttcatgtttacaataa 21190054  T
Q  173 agaccaactcaaaacagaaacatgcgaaacag 204  Q
    |||||||||||||| |||||| || |||||||    
T  21190053 agaccaactcaaaatagaaacgtgtgaaacag 21190022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 21244491 - 21244424
Alignment:
Q  94 atccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcat 161  Q
    ||||||||||| || |||  |||||||||||||||||||||||||||| ||||||||| || ||||||    
T  21244491 atccacaaaagattttcatgtcaaaccaaggctactggaaagataacataattatcaacaactttcat 21244424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 21244370 - 21244311
Alignment:
Q  196 gcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||||| |||| ||||||||||| ||| |||||||||||||||  |||||||||||||    
T  21244370 gcgaaacatggcatactgccactgagcaattcgcgaggcgagccagactactcgctatgg 21244311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 4596294 - 4596210
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  4596294 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 4596210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 10813043 - 10812915
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    |||||| |||||||||||| |||||| || || |||   |||||||| |||||| |||||||| || ||||||||| |  ||||||  ||| || |||||    
T  10813043 gtaaaatcataataaattaaccacaacagattttcatgccaaaccaaagctacttgaaagatatcataattatcaacatctttcatgtttataccaaaga 10812944  T
Q  176 ccaactcaaaacagaaacatgcgaaacag 204  Q
    | || ||| |||| ||||||| |||||||    
T  10812943 ctaattcagaacaaaaacatgggaaacag 10812915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 20634083 - 20633999
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  20634083 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 20633999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 42912653 - 42912737
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  42912653 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 42912737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 12710496 - 12710575
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  ||| || |||| |||| |||||||||||||    
T  12710496 tcaaaccaacgccactggaaagctaacacaattatctaaaactttcatgtttataccaaaggccaattcaaaacagaaac 12710575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 17902206 - 17902127
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| |||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  17902206 tcaagccaaagccactggaaagctaacacaattatctaaaactttcatgtttacaccaaaggccaattcaaaacagaaac 17902127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 46198153 - 46198082
Alignment:
Q  130 ggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  46198153 ggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 46198082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 20588282 - 20588364
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaa 191  Q
    ||||| |||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||    
T  20588282 tcacaccaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaa 20588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 20592820 - 20592902
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaa 191  Q
    ||||| |||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||    
T  20592820 tcacaccaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaa 20592902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 45496571 - 45496633
Alignment:
Q  131 gaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||| ||||||||||||| | |||||||||  |||||| |||| |||| |||||||||||||    
T  45496571 gaaagctaacacaattatctaaaattttcatgtttacaccaaaggccaattcaaaacagaaac 45496633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 21190010 - 21189969
Alignment:
Q  197 cgaaacagggcagactgccactgaacaactcgcgaggcgagc 238  Q
    ||||||||||||| |||||||||| ||| |||||||||||||    
T  21190010 cgaaacagggcaggctgccactgagcaattcgcgaggcgagc 21189969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 1643216 - 1643280
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  1643216 tggaaagttaacacaattatctaaaactttcatgtttacaccaaaggccaattcaaaacagaaac 1643280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 8e-36; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 77 - 254
Target Start/End: Original strand, 1818203 - 1818398
Alignment:
Q  77 taaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagac 176  Q
    |||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| |||  |    
T  1818203 taaaaacatattaaattatccacaaaaggttttcacgtcaaaccaaggctactagaaagataacacaattatcaataagtttcatatttacactaaatgc 1818302  T
Q  177 caactcaaaacagaaacatgcgaaacag------------------ggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatg 254  Q
    |||||||||| |||||| || || ||||                  |||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1818303 caactcaaaatagaaacgtgtgagacagacgcgagaacgcgaacatggcagactaccactgaacaactcgcgaggcgagccaatcgactcgctatg 1818398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 255
Target Start/End: Original strand, 10445481 - 10445665
Alignment:
Q  89 aaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaaca 188  Q
    |||||||||||||||| || |||  ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||| ||||||    
T  10445481 aaattatccacaaaagattttcatgtcaaaccaaagctactggaaagataacacaattatcaataactttcatatttacaccaaaggccaacttaaaaca 10445580  T
Q  189 gaaacatgcga------------------aacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
     |||| || ||                  |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10445581 taaacgtgtgaaatagacgcaagaacgcgaacatggctgactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 10445665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 30674185 - 30674066
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||| || |||  |||||||||||||||||||||||||||||||||||||| || || |||  ||| |  ||    
T  30674185 ttcgtaaaaacatattaaattatccacaaaagattttcatgtcaaaccaaggctactggaaagataacacaattatcaacaacttccatgtttatagcaa 30674086  T
Q  173 agaccaactcaaaacagaaa 192  Q
    ||||||| ||||||||||||    
T  30674085 agaccaattcaaaacagaaa 30674066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 25921337 - 25921416
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||||||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  25921337 tcaaaccaaagccactggaaagataacacaattatctaaaactttcatgtttacaccaaagcccaattcaaaacagaaac 25921416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 23655948 - 23656026
Alignment:
Q  115 caaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||||||| || ||||||||| ||||||||||||| | || ||||||  ||||||||||| |||| |||||||||||||    
T  23655948 caaaccaaagccactggaaagctaacacaattatctaaaactttcatgtttacacaaaaggccaattcaaaacagaaac 23656026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 18452223 - 18452339
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    ||||||||||  ||||| ||||||||||  || |||  |||||||||| |||||||||||||||||||||||  |  || ||||||  |||||| ||||     
T  18452223 gtaaaaacatgttaaatcatccacaaaatattttcatgtcaaaccaagactactggaaagataacacaattaatagcaactttcatgtttacaccaaagg 18452322  T
Q  176 ccaactcaaaacagaaa 192  Q
     ||| ||||||||||||    
T  18452323 tcaaatcaaaacagaaa 18452339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 32259449 - 32259541
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||| ||||||||| || ||||||||  ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  32259449 tcacgtcaaaccaaagccactggaaaactaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 32259541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 15173899 - 15173820
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||||||||  | ||||||||| ||||||||||||| | || |||||| ||||||| |||| |||| |||||||||||||    
T  15173899 tcaaaccaaatccactggaaagctaacacaattatctacaactttcatgcttacaccaaaggccaattcaaaacagaaac 15173820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 23415512 - 23415591
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  23415512 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 23415591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 25601721 - 25601634
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||| ||||||||| ||||    
T  25601721 tcaaaccaaagccactggaaagctaacacaattatctaaaactttcatgtttacaccaaaggccaattcaaaaaagaaacatgtgaaa 25601634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 23501095 - 23501140
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatg 254  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||    
T  23501095 gactgccactgagtaactcgcgaggcgagccactctactcgctatg 23501140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 12942752 - 12942824
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  12942752 tggaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 12942824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 15891160 - 15891076
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  15891160 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 15891076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 17318571 - 17318487
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  17318571 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 17318487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 28288936 - 28288864
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  28288936 tggaaagctaacaaaattatctacaactttcatgtttacactaaagaccaattcaaaacagaaacatgtgaaa 28288864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 13764954 - 13765041
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || | ||||||| ||||| ||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  13764954 tcaaaccaaagccattggaaagctaacaaaattatctaaaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 13765041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 17229723 - 17229690
Alignment:
Q  222 caactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||||||||| ||||||||||||||    
T  17229723 caactcgcgaggcgagccactctactcgctatgg 17229690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 31735506 - 31735461
Alignment:
Q  210 actgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||||||||  |||||| ||||||||||| ||||||||||||||    
T  31735506 actgccactgagtaactcgtgaggcgagccactctactcgctatgg 31735461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 19655678 - 19655594
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| |||||||||  | ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  19655678 tcacgtcaaaccaaaaccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 19655594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 27125925 - 27125841
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| |||||| || || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  27125925 tcacctcaaacaaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 27125841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 14476906 - 14477037
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||||| || |||| |||||||||| ||||||||||||||||||||||| ||| || ||||||  |||||| ||    
T  14476906 ttcgtaaaaacatgttaaattatccacaaaagattttcacgtcaaaccaagactactggaaagataacacaattaccaacaactttcatgtttacaccaa 14477005  T
Q  173 agaccaactcaaaacagaaacatgcgaaacag 204  Q
    |||||||||| |||||||||| || |||||||    
T  14477006 agaccaactcgaaacagaaacgtgtgaaacag 14477037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 255
Target Start/End: Original strand, 9621773 - 9621958
Alignment:
Q  89 aaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaaca 188  Q
    ||||||| |||||||| || |||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||   ||||| |||  ||||||||||| |    
T  9621773 aaattattcacaaaagattttcacgtcaaaccaaggatacaggaaagataacacaattatcaataactttcatgtatacactaaatgccaactcaaaata 9621872  T
Q  189 gaaacatgcgaa-------------------acagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||| ||||||                   ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  9621873 gaaacgtgcgaaacagacgcaagaacacgaaacagggcagactgccactgaacaactcacgaggcgagccaatctacttgctatgg 9621958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 10272957 - 10273041
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| || ||||||  ||||||  ||||||||||||||||||||||    
T  10272957 tcacatcaaaccaagactattggaaagataacacaattatcaacaactttcatgtttacactgaagaccaactcaaaacagaaac 10273041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 13164657 - 13164779
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctac---tggaaagataacacaattatcaataattttcatacttacac 169  Q
    |||||||||||||  ||||||||||||||||  || |||  |||||||||| ||||   ||||||||||||||||||||||| || ||||||  ||||||    
T  13164657 ttcgtaaaaacatgttaaattatccacaaaatattttcatgtcaaaccaagactactactggaaagataacacaattatcaacaactttcatgtttacac 13164756  T
Q  170 aaaagaccaactcaaaacagaaa 192  Q
     ||||  ||| ||||| ||||||    
T  13164757 caaaggtcaaatcaaagcagaaa 13164779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 19566363 - 19566276
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  ||||||||||| | || |||||||||||||||| ||||    
T  19566363 tcaaaccaaagccactggaaagctaacacaattatctaaaactttcatgtttacacaaaaggctaattcaaaacagaaacatgtgaaa 19566276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 55582799 - 55582889
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaacag 204  Q
    ||||||||| || ||||||||| |||||| |||||| | || ||||||  |||||| |||| |||| ||||||||||||| ||||||||||    
T  55582799 tcaaaccaaagccactggaaagctaacacgattatctaaaactttcatgtttacaccaaaggccaattcaaaacagaaacgtgcgaaacag 55582889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 14549229 - 14549321
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||||||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| ||||||||||| |||| ||||    
T  14549229 tcacatcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacactaaaggccaattcaaaacagaagcatgtgaaa 14549321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 10237942 - 10237855
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||| ||| || ||||||||| |||||||| ||| ||| ||||    
T  10237942 tcaaaccaacgccactggaaagctaacacaattatctaaaactttcatatttataccaaagaccaattcaaaacaaaaatatgtgaaa 10237855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 16998133 - 16998212
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  16998133 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 16998212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 26445492 - 26445571
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| |||||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  26445492 tcaaaccaaagctactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 26445571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 10694691 - 10694613
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaa 192  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| ||||||||||||    
T  10694691 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaa 10694613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 10908457 - 10908379
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaa 192  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| ||||||||||||    
T  10908457 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaa 10908379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 15008576 - 15008653
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| ||||||||| |||||||| ||||    
T  15008576 aaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaagaccaattcaaaacataaac 15008653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 15534744 - 15534816
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  15534744 tggaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 15534816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 25091256 - 25091340
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  25091256 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 25091340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 36038433 - 36038505
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  36038433 tggaaagctaacaaaattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 36038505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 37019272 - 37019356
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  37019272 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 37019356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 14630434 - 14630513
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||  ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  14630434 tcaaaccaaagccactggaaaactaacacaattatctacaactttcatgtttacaccaaaggccaaatcaaaacagaaac 14630513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 14873701 - 14873614
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| | || ||||||||| ||||||||||||| | || ||||||  |||||| |||| | || |||||||||||||||| ||||    
T  14873701 tcaaaccgacgccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggctaattcaaaacagaaacatgtgaaa 14873614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 14477048 - 14477089
Alignment:
Q  196 gcgaaacagggcagactgccactgaacaactcgcgaggcgag 237  Q
    |||||||||||||| |||| ||||||||| ||||||||||||    
T  14477048 gcgaaacagggcaggctgctactgaacaattcgcgaggcgag 14477089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 25513365 - 25513429
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| ||||||||||||| | || ||||||| |||||| |||| |||| |||||||| ||||    
T  25513365 tggaaagctaacacaattatctacaactttcatatttacaccaaaggccaattcaaaacataaac 25513429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 40229911 - 40229999
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaa-ctcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| ||||  |||||| ||||||||| ||||    
T  40229911 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaatttcaaaatagaaacatgtgaaa 40229999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 53630922 - 53630838
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| ||||  ||| |||||||||||||    
T  53630922 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggtcaattcaaaacagaaac 53630838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 6420 - 6312
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||   ||||  ||    
T  6420 ttcgtaaaaacatattaaattatccacaaaagattttcacgtcaaaccaaggctactggaaagataacacaattatcaataactttcatgtctacagtaa 6321  T
Q  173 agaccaact 181  Q
    |||||||||    
T  6320 agaccaact 6312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 6267 - 6202
Alignment:
Q  208 agactgccactgaacaactcgcgaggcgagccaatctactcgctatggtgagctccacctatgaac 273  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| ||| || || |||||||    
T  6267 agactgccactgaacaactcgcaaggcgagccaatctactcgctttggcgagttcaacatatgaac 6202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 30233 - 30299
Alignment:
Q  127 actggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  30233 actggaaagctaacacaattatctacaactttcatgtttacactaaaggccaattcaaaacagaaac 30299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 65441 - 65561
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||  || |||  |||||||||||||||||||||||||||||||||||||| || ||||||  ||| |||||    
T  65441 ttcgtaaaaacatattaaattatccacaaaatattttcatgtcaaaccaaggctactggaaagataacacaattatcaacaactttcatgtttatacaaa 65540  T
Q  173 agaccaactcaaaacagaaac 193  Q
    |||| || |||||||||||||    
T  65541 agactaattcaaaacagaaac 65561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 74908 - 75027
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||  || |||  |||||||| ||||||||||||||||||||||||||||| || ||||||  ||| |||||    
T  74908 ttcgtaaaaacatattaaattatccacaaaatattttcatgtcaaaccacggctactggaaagataacacaattatcaacaactttcatgtttatacaaa 75007  T
Q  173 agaccaactcaaaacagaaa 192  Q
    ||||  | ||||||||||||    
T  75008 agacttattcaaaacagaaa 75027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 109633 - 109679
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||    
T  109633 gactgccactgagtaactcgcgaggcgagccactctactcgctatgg 109679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 9959 - 9840
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| |||||||| |||||||| || |||  |||||||||||||||||||||| ||||||||||||||| || || |||| ||| || ||    
T  9959 ttcgtaaaaacatattaaattattcacaaaagattttcatgtcaaaccaaggctactggaaagttaacacaattatcaacaacttccatatttataccaa 9860  T
Q  173 agaccaactcaaaacagaaa 192  Q
    ||||||| ||||||||||||    
T  9859 agaccaattcaaaacagaaa 9840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 27400 - 27288
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||| ||||||||| |||||||| |||||||| || |||  ||||||||||||||||| |||||||||||||||||||| || || |||| ||| || ||    
T  27400 ttcgcaaaaacatattaaattattcacaaaagattttcatgtcaaaccaaggctactgaaaagataacacaattatcaacaacttccatatttataccaa 27301  T
Q  173 agaccaactcaaa 185  Q
    ||||||| |||||    
T  27300 agaccaattcaaa 27288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 8034 - 7949
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcat 161  Q
    ||||||||||| ||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||| || ||||||    
T  8034 gtaaaaacatattaaattatccacaaaagattttcacgtcaaaccaaggctactggaaagataacacaattatcaacaactttcat 7949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 8338 - 8466
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    ||||||||||| ||||||||||||||||| || |||| |||||||||||||||| ||||||||||||||| |||||||| || |||  |||||| |||      
T  8338 gtaaaaacatattaaattatccacaaaagattttcacgtcaaaccaaggctacttgaaagataacacaatgatcaataacttacatgtttacactaaatg 8437  T
Q  176 ccaactcaaaacagaaacatgcgaaacag 204  Q
     |||||||||||| |||| || |||||||    
T  8438 tcaactcaaaacaaaaacgtgtgaaacag 8466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 8485 - 8542
Alignment:
Q  204 gggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatggtgagct 261  Q
    |||||| ||| ||||||  ||||||||||||||||||||||||||||||||| |||||    
T  8485 gggcaggctggcactgagtaactcgcgaggcgagccaatctactcgctatggcgagct 8542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 2651 - 2532
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||||  || |||| |||||||||| ||||||||||| ||||||||||||||| || ||||||  |||||| ||    
T  2651 ttcgtaaaaacatgttaaattatccacaaaatattttcacgtcaaaccaagactactggaaaggtaacacaattatcaacaactttcatgtttacaccaa 2552  T
Q  173 agaccaactcaaaacagaaa 192  Q
    ||||||| ||||| ||||||    
T  2551 agaccaattcaaatcagaaa 2532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 21403887 - 21404006
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||||| || |||| ||||| |||| ||| ||||||||||||||||||||||| || ||||||  |||||| ||    
T  21403887 ttcgtaaaaacatgttaaattatccacaaaagattttcacgtcaaagcaagactattggaaagataacacaattatcaacaactttcatgtttacaccaa 21403986  T
Q  173 agaccaactcaaaacagaaa 192  Q
    ||||||| ||||| ||||||    
T  21403987 agaccaattcaaatcagaaa 21404006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 20312557 - 20312652
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaacag 204  Q
    ||||||||||| ||| | ||||||||||||||||||||||||| || ||||||  ||||||  |||||||||||||||||||||| || |||||||    
T  20312557 tcacatcaaactaagaccactggaaagataacacaattatcaacaactttcatgtttacaccgaagaccaactcaaaacagaaacgtgtgaaacag 20312652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 21503531 - 21503607
Alignment:
Q  200 aacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatggtgagctccacctatgaaccac 276  Q
    |||| ||||||||||| || ||||||||||||||||||||| |||||||||||||| ||| || || | ||||||||    
T  21503531 aacatggcagactgcccctaaacaactcgcgaggcgagccagtctactcgctatggcgagttcaacatgtgaaccac 21503607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 26765742 - 26765674
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataaca 141  Q
    |||||||||||||| ||| ||||||||| ||| || |||| ||||| ||||| ||||||||||||||||    
T  26765742 ttcgtaaaaacatattaagttatccacacaagattttcacgtcaaaacaagggtactggaaagataaca 26765674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 8833651 - 8833572
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  8833651 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 8833572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 14026252 - 14026165
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || |||||||| |||||| ||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  14026252 tcaaaccaaagccactggaaatataacataattatctaaaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 14026165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 17011334 - 17011413
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  ||||||||||  |||| |||||||||||||    
T  17011334 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacacaaaatgccaattcaaaacagaaac 17011413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 29914742 - 29914787
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatg 254  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||    
T  29914742 gactgccactgagtaactcgcgaggcgagccactctactcgctatg 29914787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 263481 - 263544
Alignment:
Q  130 ggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||||| ||||||||||||| |||| ||||||  |||||| ||||||||| |||||||| ||||    
T  263481 ggaaagctaacacaattatctataactttcatgtttacaccaaagaccaattcaaaacaaaaac 263544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 8504313 - 8504226
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| || || |||||| ||||| ||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  8504313 tcaaaccaaagccacaggaaagctaacataattatctacaactttcatttttacaccaaaggccaattcaaaacagaaacatgtgaaa 8504226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 9776713 - 9776800
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| | || | ||||| ||||| ||||||| | || ||||||  |||||| ||||||||| |||||||||||||||| ||||    
T  9776713 tcaaaccaacggtattagaaagctaacataattatctacaactttcatgtttacaccaaagaccaattcaaaacagaaacatgtgaaa 9776800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 16605048 - 16604969
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||| ||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  16605048 tcaaaccaaagccactagaaagctaacacaattatctaaaactttcatgtttacaccaaaggccaattcaaaacagaaac 16604969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 39245683 - 39245770
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| | || ||||||||| ||||||||||||| | || ||||||  |||||| |||| | || |||||||||||||||| ||||    
T  39245683 tcaaaccgacgccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggctaattcaaaacagaaacatgtgaaa 39245770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 1627825 - 1627747
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaa 192  Q
    ||||||||| || ||| ||||||||||||||||||| | || ||||||  | |||| |||| |||| ||||||||||||    
T  1627825 tcaaaccaaagccactagaaagataacacaattatctaaaactttcatgttcacaccaaaggccaattcaaaacagaaa 1627747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 20469709 - 20469663
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||||||| ||| ||||||||||||||    
T  20469709 gactgccactgagtaactcgcgaggcgatccactctactcgctatgg 20469663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 21618620 - 21618579
Alignment:
Q  214 ccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||||  |||||||||||||||||| ||||||||||||||    
T  21618620 ccactgagtaactcgcgaggcgagccactctactcgctatgg 21618579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 26762011 - 26762088
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| || ||||||||| ||||||| ||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  26762011 aaaccaaagccactggaaagctaacacatttatctacaactttcatgtttacactaaaggccaattcaaaacagaaac 26762088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 32607754 - 32607682
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  32607754 tggaaagctaacaaaattatctaaaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 32607682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 7128 - 7002
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    ||||||||||  ||||||||||||||||| || |||| |||||||||||||||| ||||||||||||||||||| |||| || |||  |||||| ||||     
T  7128 gtaaaaacat--taaattatccacaaaagattttcacgtcaaaccaaggctactagaaagataacacaattatctataacttacatgtttacactaaagg 7031  T
Q  176 ccaactcaaaacagaaacatgcgaaacag 204  Q
     |||||||||||| |||| || |||||||    
T  7030 gcaactcaaaacaaaaacgtgtgaaacag 7002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 6984 - 6932
Alignment:
Q  203 agggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||| ||||||||||  |||||||||||||||||||| ||||| ||||||    
T  6984 agggcaggctgccactgagtaactcgcgaggcgagccaatatactcactatgg 6932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 82860 - 82755
Alignment:
Q  88 taaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaac 187  Q
    |||||||| |||||||| || ||||||||||||||  |||||||| |||||||||||||||||| || ||||||  ||| || |||||||||||||||||    
T  82860 taaattatacacaaaagattttcacatcaaaccaaaactactggagagataacacaattatcaacaactttcatgtttataccaaagaccaactcaaaac 82761  T
Q  188 agaaac 193  Q
    ||||||    
T  82760 agaaac 82755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 4452 - 4572
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||| || |||  |||||||||||||  ||||||||||||||||||||||| || ||| ||  ||| |||||    
T  4452 ttcgtaaaaacatattaaattatccacaaaagattttcatgtcaaaccaaggctcttggaaagataacacaattatcaagaacttttatgtttatacaaa 4551  T
Q  173 agaccaactcaaaacagaaac 193  Q
    |||| || |||||||| ||||    
T  4552 agactaattcaaaacataaac 4572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 15532 - 15652
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||| ||||||||||||||||| || |||  |||| ||||||||| |||||||||||||||||||| || || ||||||  ||| | |||    
T  15532 ttcgtaaaaacatattaaattatccacaaaagattttcatgtcaacccaaggctaatggaaagataacacaattataaacaactttcatgtttatataaa 15631  T
Q  173 agaccaactcaaaacagaaac 193  Q
    |||| || |||||||||||||    
T  15632 agactaattcaaaacagaaac 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 10574 - 10693
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||| | ||||||||||||||||| || |||  |||||||||||||  ||||||||||||||||||||||| || ||| ||  ||| |||||    
T  10574 ttcgtaaaaaca-attaaattatccacaaaagattttcatgtcaaaccaaggctcttggaaagataacacaattatcaagaacttttatgtttatacaaa 10672  T
Q  173 agaccaactcaaaacagaaac 193  Q
    |||| || |||||||| ||||    
T  10673 agactaattcaaaacataaac 10693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 22935 - 23041
Alignment:
Q  76 gtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaaga 175  Q
    ||||||||||  ||||||||||||||| | ||||||| ||||||||||||||||| |||||||||| ||||||||| || ||||||  ||| || |||||    
T  22935 gtaaaaacatgttaaattatccacaaaggattatcacgtcaaaccaaggctactgaaaagataacagaattatcaacaactttcatgtttataccaaaga 23034  T
Q  176 ccaactc 182  Q
    |||||||    
T  23035 ccaactc 23041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 27996 - 28112
Alignment:
Q  88 taaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaac 187  Q
    |||||||| |||||||  || |||| |||||||||| |||||||||||||||||||||| |||| || ||||||  ||| || ||||||||||||||||     
T  27996 taaattatacacaaaatattttcacgtcaaaccaagactactggaaagataacacaattgtcaacaactttcatgtttataccaaagaccaactcaaaat 28095  T
Q  188 agaaacatgcgaaacag 204  Q
    |||||| || |||||||    
T  28096 agaaacgtgtgaaacag 28112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 28123 - 28163
Alignment:
Q  196 gcgaaacagggcagactgccactgaacaactcgcgaggcga 236  Q
    |||||||||||||| |||||||||||||| |||| ||||||    
T  28123 gcgaaacagggcaggctgccactgaacaattcgccaggcga 28163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 31468 - 31587
Alignment:
Q  73 ttcgtaaaaacataataaattatccacaaaaggttatcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaa 172  Q
    |||||||||||||  ||||||||||||||||| || |||  |||||| ||| | ||||||||||||||||||||||||| || ||||||  |||||| ||    
T  31468 ttcgtaaaaacatgttaaattatccacaaaagattttcatgtcaaacaaagacaactggaaagataacacaattatcaacaactttcatgtttacaccaa 31567  T
Q  173 agaccaactcaaaacagaaa 192  Q
    ||  ||| ||||||||||||    
T  31568 aggtcaaatcaaaacagaaa 31587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1354 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1354
Description:

Target: scaffold1354; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 243 - 185
Alignment:
Q  196 gcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatg 254  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  243 gcgaaacagggcagactgccactgaacaactcgcaaggcgagccagtctactcgctatg 185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 44420 - 44356
Alignment:
Q  208 agactgccactgaacaactcgcgaggcgagccaatctactcgctatggtgagctccacctatgaa 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || ||||||    
T  44420 agactgccactgaacaactcgcgaggcgagccaatctactcgctatggcgaactcaacatatgaa 44356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 39746 - 39670
Alignment:
Q  200 aacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatggtgagctccacctatgaaccac 276  Q
    |||| |||||| ||||||||||||||||||||||||||||||| || || |||||  |||||| || ||||| ||||    
T  39746 aacatggcagattgccactgaacaactcgcgaggcgagccaatgtaatcactatgtcgagctcaacatatgatccac 39670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 7822 - 7914
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||||||||||||| || ||||||||| ||||||||||||| | || ||||||  || |||||||| |||| |||||||||||||||| ||||    
T  7822 tcacatcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttgcacaaaaggccaattcaaaacagaaacatgtgaaa 7914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 14453 - 14545
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||||||||||||| || ||||||||| ||||||||||||| | || ||||||  || |||||||| |||| |||||||||||||||| ||||    
T  14453 tcacatcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttgcacaaaaggccaattcaaaacagaaacatgtgaaa 14545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 60408 - 60322
Alignment:
Q  117 aaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaaca 203  Q
    ||||||| ||||||||||||||||||| ||||||| || ||||||  |||||| || |||||||| ||||||||||| || ||||||    
T  60408 aaccaagactactggaaagataacacagttatcaacaactttcatgtttacaccaaggaccaacttaaaacagaaacgtgtgaaaca 60322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 60310 - 60268
Alignment:
Q  196 gcgaaacagggcagactgccactgaacaactcgcgaggcgagc 238  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  60310 gcgaaacagggcaggctgccactgaacaattcgcgaggcgagc 60268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 6066 - 6145
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||  ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  6066 tcaaaccaaagccactggaaatctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 6145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 3682 - 3622
Alignment:
Q  199 aaacagggcagactgccactgaacaactcgcgaggcgagccaatctactcgctatggtgag 259  Q
    ||||| ||| |||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  3682 aaacaaggctgactgccactgaacaactcgcgaggcgagctactctactcgctatgatgag 3622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 19168 - 19219
Alignment:
Q  196 gcgaaacagggcagactgccactgaacaactcgcgaggcgagccaatctact 247  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  19168 gcgaaatagggctgactgccactgaacaactcgcgaggcgagccactctact 19219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 42301 - 42380
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || |||||| |||||||||||||||| | || ||||||| |||||| |||| |||| |||||||||||||    
T  42301 tcaaaccaaagccactggatagataacacaattatctacaactttcatatttacaccaaaggccaattcaaaacagaaac 42380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 11949 - 11872
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| || ||||||||| ||||||||||||| | |||||||||  |||||| |||| |||| |||||||||||||    
T  11949 aaaccaaagccactggaaagctaacacaattatctacaattttcatgtttacaccaaaggccaattcaaaacagaaac 11872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 19688 - 19624
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| ||||||||||||| | ||||||||| ||||||| |||| |||| |||||||||||||    
T  19688 tggaaagctaacacaattatctacaattttcatgcttacaccaaaggccaattcaaaacagaaac 19624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 58351 - 58435
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||| |||||| |||| |||| |||||||||||||    
T  58351 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatatttacaccaaaggccaattcaaaacagaaac 58435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 15035 - 14943
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  15035 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 14943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 24093 - 24001
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  24093 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 24001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 8566 - 8645
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  8566 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 8645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 169046 - 169125
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||  ||||||||||||||||||    
T  169046 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaagccaactcaaaacagaaac 169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 10891 - 10809
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatg 196  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| ||||  ||| ||||||||||||||||    
T  10891 tcaaaccaaagccactggaaagttaacacaattatctacaactttcatgtttacaccaaagggcaattcaaaacagaaacatg 10809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 23648 - 23570
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaa 192  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| ||||||||||||    
T  23648 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaa 23570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 22200 - 22126
Alignment:
Q  127 actggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  22200 actggaaagttaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaacatgtgaaa 22126  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 95754 - 95800
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||    
T  95754 gactgccactgagtaactcgcgaggcgagccactctactcgctatgg 95800  T

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Target: scaffold0462 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 10831 - 10908
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| ||||||| |||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  10831 aaaccaaagctactgaaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 10908  T

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Target: scaffold0162 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 24505 - 24428
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  24505 aaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaagtccaattcaaaacagaaac 24428  T

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Target: scaffold1633 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 808 - 892
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || |||| |||| |||| |||||||| | || ||||||  |||||| |||| ||||||||||||||||||    
T  808 tcacgtcaaaccaaagcaactgaaaagctaactcaattatctacaactttcatgtttacaccaaaggccaactcaaaacagaaac 892  T

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Target: scaffold0232 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 3893 - 3957
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| ||||||||||||| | || ||||||  |||||| |||||| ||||||||||||||||    
T  3893 tggaaagctaacacaattatctacaactttcatgtttacaccaaagactaactcaaaacagaaac 3957  T

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Target: scaffold0151 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 30488 - 30532
Alignment:
Q  211 ctgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||    
T  30488 ctgccaatgagcaactcgcgaggcgagccactctactcgctatgg 30532  T

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Target: scaffold0047 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 78667 - 78751
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||||| || ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  78667 tcacgtcaaaccaaagccactggaaagctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 78751  T

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Target: scaffold0515 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 4642 - 4721
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||| ||||    
T  4642 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacaaaaac 4721  T

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Target: scaffold0439 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 4028 - 4107
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||  || ||||||||| ||||||||||||| | || ||||||  |||||| |||  ||||||||||||||||||    
T  4028 tcaaaccagagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaagccaactcaaaacagaaac 4107  T

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Target: scaffold0306 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 4642 - 4721
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||| ||||    
T  4642 tcaaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacaaaaac 4721  T

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Target: scaffold0216 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 21863 - 21942
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || | ||||||| ||||| ||||||||| || ||||||  |||||| |||| |||| |||||||||||||    
T  21863 tcaaaccaaagccattggaaagctaacaaaattatcaacaactttcatgtttacaccaaaggccaattcaaaacagaaac 21942  T

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Target: scaffold0051 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 64513 - 64434
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||  ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  64513 tcaaaccaaagccactggaaatctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 64434  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 186949 - 186870
Alignment:
Q  114 tcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||||| || ||||||||  ||||||||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  186949 tcaaaccaaagccactggaaaactaacacaattatctacaactttcatgtttacaccaaaggccaaatcaaaacagaaac 186870  T

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Target: scaffold0445 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 2515 - 2469
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||||||||||| |||||||| |||||    
T  2515 gactgccactgagtaactcgcgaggcgagccactctactcgttatgg 2469  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 586 - 540
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  | |||||||||||||||| ||||||||||||||    
T  586 gactgccactgagtagctcgcgaggcgagccactctactcgctatgg 540  T

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Target: scaffold0251 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 20608 - 20562
Alignment:
Q  209 gactgccactgaacaactcgcgaggcgagccaatctactcgctatgg 255  Q
    ||||||||||||  |||||||||||||||||| ||||||| ||||||    
T  20608 gactgccactgagtaactcgcgaggcgagccactctactcactatgg 20562  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 143234 - 143308
Alignment:
Q  127 actggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaacatgcgaaa 201  Q
    ||||||||| |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||||| ||||    
T  143234 actggaaagctaactcaattatctacaactttcatctttacaccaaaggccaattcaaaacagaaacatgtgaaa 143308  T

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Target: scaffold0334 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 126 - 203
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| || | ||||||||||||| ||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  126 aaaccaaagccattggaaagataacaaaattatctaaaactttcatgtttacaccaaaggccaattcaaaacagaaac 203  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 22233 - 22156
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| || ||||||||| |||| |||||||| | |||||||||  |||||| ||||  ||| |||||||||||||    
T  22233 aaaccaaagccactggaaagctaactcaattatctacaattttcatgtttacaccaaaggtcaattcaaaacagaaac 22156  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 21691 - 21768
Alignment:
Q  116 aaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| || ||||||||| ||||||||||||| | || ||||||  |||||| |||| |||| |||||||| ||||    
T  21691 aaaccaaagccactggaaagctaacacaattatctacaactttcatgtttacaccaaaggccaattcaaaacaaaaac 21768  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 33942 - 34026
Alignment:
Q  109 tcacatcaaaccaaggctactggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    |||| ||||||| | |||||||||| | |||| |||||||| | || ||||||  |||||| |||| |||| |||||||||||||    
T  33942 tcacgtcaaaccgaagctactggaatgctaactcaattatctacaactttcatgtttacaccaaaggccaattcaaaacagaaac 34026  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 169062 - 169126
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| |||| ||||||||||||||||||    
T  169062 tggaaagctaacaaaattatctacaactttcatgtttacactaaaggccaactcaaaacagaaac 169126  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 176415 - 176479
Alignment:
Q  129 tggaaagataacacaattatcaataattttcatacttacacaaaagaccaactcaaaacagaaac 193  Q
    ||||||| ||||| ||||||| | || ||||||  |||||| |||| ||||||||||||||||||    
T  176415 tggaaagctaacaaaattatctacaactttcatgtttacactaaaggccaactcaaaacagaaac 176479  T

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