View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0736_high_10 (Length: 273)

Name: NF0736_high_10
Description: NF0736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0736_high_10
NF0736_high_10
[»] chr6 (18 HSPs)
chr6 (31-246)||(33637466-33637681)
chr6 (30-141)||(19284139-19284252)
chr6 (30-142)||(32017759-32017872)
chr6 (38-141)||(18500325-18500429)
chr6 (39-90)||(9481446-9481497)
chr6 (32-126)||(9854144-9854238)
chr6 (30-83)||(2299564-2299617)
chr6 (38-90)||(26385341-26385393)
chr6 (38-90)||(33714550-33714602)
chr6 (30-69)||(18500602-18500641)
chr6 (30-84)||(24732007-24732061)
chr6 (39-126)||(14681146-14681235)
chr6 (38-90)||(24732201-24732253)
chr6 (30-90)||(26385529-26385589)
chr6 (46-86)||(30618232-30618272)
chr6 (45-90)||(9154943-9154988)
chr6 (30-87)||(9481248-9481305)
chr6 (34-86)||(30618029-30618081)
[»] chr3 (44 HSPs)
chr3 (30-142)||(20853951-20854064)
chr3 (30-142)||(33372415-33372529)
chr3 (30-141)||(17465622-17465735)
chr3 (30-95)||(45003554-45003619)
chr3 (39-142)||(52552699-52552806)
chr3 (30-90)||(11003795-11003855)
chr3 (30-141)||(30500296-30500408)
chr3 (30-86)||(43572456-43572512)
chr3 (30-140)||(52552943-52553055)
chr3 (32-141)||(4204719-4204829)
chr3 (40-90)||(33372669-33372719)
chr3 (39-88)||(14162135-14162184)
chr3 (30-141)||(14171841-14171954)
chr3 (30-90)||(14161934-14161994)
chr3 (38-90)||(14171649-14171701)
chr3 (30-86)||(16722058-16722114)
chr3 (39-141)||(16722255-16722359)
chr3 (30-90)||(19113020-19113080)
chr3 (38-90)||(21633159-21633211)
chr3 (30-86)||(38283617-38283673)
chr3 (30-90)||(45969978-45970038)
chr3 (30-90)||(49986591-49986651)
chr3 (39-90)||(5800869-5800920)
chr3 (39-142)||(14262045-14262150)
chr3 (38-90)||(4204971-4205022)
chr3 (38-90)||(9267038-9267090)
chr3 (30-90)||(14262291-14262351)
chr3 (30-90)||(21632959-21633019)
chr3 (30-86)||(38283805-38283861)
chr3 (39-126)||(45058755-45058843)
chr3 (30-85)||(9267230-9267285)
chr3 (39-90)||(15328724-15328775)
chr3 (38-85)||(35995746-35995793)
chr3 (39-90)||(47575336-47575387)
chr3 (32-86)||(43572648-43572702)
chr3 (30-87)||(5800671-5800728)
chr3 (46-126)||(36990931-36991012)
chr3 (46-126)||(37016371-37016452)
chr3 (38-126)||(45003759-45003848)
chr3 (45-90)||(45970185-45970230)
chr3 (34-90)||(17649269-17649325)
chr3 (38-90)||(20853759-20853811)
chr3 (39-126)||(30500068-30500155)
chr3 (38-86)||(49986791-49986838)
[»] chr5 (33 HSPs)
chr5 (30-141)||(31799895-31800007)
chr5 (39-142)||(29445070-29445174)
chr5 (30-126)||(41001608-41001705)
chr5 (30-90)||(18336531-18336591)
chr5 (30-141)||(20709467-20709579)
chr5 (39-141)||(27159001-27159104)
chr5 (34-126)||(17762308-17762401)
chr5 (30-83)||(24650954-24651007)
chr5 (30-141)||(27159212-27159322)
chr5 (30-90)||(7126172-7126232)
chr5 (39-90)||(18336720-18336771)
chr5 (30-84)||(4919245-4919299)
chr5 (30-126)||(6817376-6817474)
chr5 (30-141)||(24074313-24074426)
chr5 (30-141)||(24837424-24837537)
chr5 (34-90)||(994005-994061)
chr5 (30-141)||(14143912-14144024)
chr5 (30-90)||(14411760-14411820)
chr5 (38-90)||(24837232-24837284)
chr5 (38-128)||(14411929-14412020)
chr5 (39-90)||(24074566-24074617)
chr5 (39-90)||(31799703-31799754)
chr5 (32-90)||(6817185-6817243)
chr5 (32-159)||(23979158-23979285)
chr5 (45-90)||(24650763-24650808)
chr5 (30-87)||(29444872-29444929)
chr5 (38-142)||(30512297-30512402)
chr5 (38-142)||(30552637-30552742)
chr5 (38-90)||(4919053-4919105)
chr5 (39-90)||(7125980-7126031)
chr5 (39-90)||(14144165-14144216)
chr5 (32-90)||(20709275-20709333)
chr5 (38-90)||(17762545-17762597)
[»] chr4 (36 HSPs)
chr4 (30-141)||(7819025-7819137)
chr4 (30-90)||(46046679-46046739)
chr4 (30-142)||(9516865-9516979)
chr4 (45-142)||(12904756-12904854)
chr4 (30-126)||(35376188-35376285)
chr4 (30-90)||(9619043-9619103)
chr4 (32-90)||(13132004-13132062)
chr4 (30-126)||(38574223-38574321)
chr4 (38-142)||(35376391-35376496)
chr4 (42-142)||(48260018-48260119)
chr4 (30-90)||(3018075-3018135)
chr4 (45-140)||(9396969-9397065)
chr4 (30-126)||(13132196-13132292)
chr4 (30-141)||(15640726-15640838)
chr4 (32-126)||(3273877-3273972)
chr4 (38-142)||(9516619-9516725)
chr4 (30-84)||(26252337-26252391)
chr4 (46-128)||(36888951-36889033)
chr4 (30-95)||(34064237-34064302)
chr4 (30-90)||(31944013-31944073)
chr4 (39-141)||(37012717-37012821)
chr4 (30-154)||(9396698-9396822)
chr4 (31-142)||(41947112-41947223)
chr4 (30-84)||(31090316-31090370)
chr4 (30-83)||(3273692-3273745)
chr4 (45-90)||(9619249-9619294)
chr4 (38-141)||(34063992-34064097)
chr4 (30-87)||(48580121-48580178)
chr4 (40-142)||(26252502-26252606)
chr4 (38-90)||(31090124-31090176)
chr4 (38-90)||(38574031-38574083)
chr4 (32-90)||(15640972-15641030)
chr4 (30-84)||(37012962-37013016)
chr4 (30-87)||(18713026-18713083)
chr4 (38-83)||(46046494-46046539)
chr4 (30-141)||(4355892-4356004)
[»] chr7 (32 HSPs)
chr7 (30-138)||(6465868-6465977)
chr7 (30-138)||(10409388-10409497)
chr7 (32-141)||(38879981-38880089)
chr7 (30-142)||(1250461-1250575)
chr7 (30-141)||(12006795-12006908)
chr7 (30-141)||(28218418-28218531)
chr7 (30-90)||(41600213-41600273)
chr7 (30-142)||(25772586-25772700)
chr7 (30-126)||(48672534-48672632)
chr7 (38-90)||(10409637-10409689)
chr7 (30-90)||(20419791-20419851)
chr7 (30-90)||(23704724-23704784)
chr7 (38-141)||(25772374-25772478)
chr7 (30-90)||(48648484-48648544)
chr7 (34-90)||(20458950-20459006)
chr7 (38-90)||(20963558-20963610)
chr7 (30-90)||(23383755-23383815)
chr7 (38-90)||(24195059-24195111)
chr7 (38-90)||(28218242-28218294)
chr7 (40-126)||(16995225-16995312)
chr7 (38-84)||(12006609-12006655)
chr7 (38-150)||(44816834-44816950)
chr7 (38-126)||(23704924-23705013)
chr7 (30-82)||(7658224-7658276)
chr7 (38-98)||(20458746-20458806)
chr7 (38-90)||(38879787-38879839)
chr7 (38-86)||(41600025-41600073)
chr7 (38-90)||(48672342-48672394)
chr7 (45-142)||(1250215-1250314)
chr7 (30-84)||(31851494-31851548)
chr7 (38-141)||(20419546-20419651)
chr7 (30-90)||(7658034-7658094)
[»] chr8 (25 HSPs)
chr8 (38-141)||(17622900-17623002)
chr8 (30-126)||(17623142-17623239)
chr8 (30-141)||(14820305-14820417)
chr8 (38-141)||(43851675-43851779)
chr8 (30-126)||(2583345-2583443)
chr8 (30-141)||(7689534-7689646)
chr8 (30-141)||(26136695-26136808)
chr8 (30-90)||(10108433-10108493)
chr8 (30-141)||(30789762-30789875)
chr8 (39-141)||(5555133-5555237)
chr8 (38-90)||(7689786-7689838)
chr8 (39-90)||(21148000-21148051)
chr8 (38-85)||(38726755-38726802)
chr8 (30-84)||(21148191-21148245)
chr8 (32-90)||(30789570-30789628)
chr8 (39-141)||(10108634-10108738)
chr8 (38-86)||(10171406-10171454)
chr8 (38-90)||(26532846-26532898)
chr8 (39-90)||(14767570-14767621)
chr8 (39-90)||(14820558-14820609)
chr8 (38-84)||(26136948-26136994)
chr8 (32-90)||(42113047-42113105)
chr8 (30-68)||(42113239-42113277)
chr8 (38-71)||(43481473-43481506)
chr8 (30-90)||(5554932-5554992)
[»] chr2 (27 HSPs)
chr2 (30-141)||(19251481-19251593)
chr2 (30-90)||(15106130-15106190)
chr2 (30-126)||(13254522-13254620)
chr2 (30-141)||(17850841-17850954)
chr2 (30-90)||(26135880-26135940)
chr2 (38-141)||(26236358-26236462)
chr2 (30-142)||(26236136-26236250)
chr2 (30-83)||(23806022-23806075)
chr2 (38-86)||(15106330-15106378)
chr2 (38-90)||(17850649-17850701)
chr2 (30-90)||(22263446-22263506)
chr2 (30-86)||(23854921-23854977)
chr2 (30-140)||(34548585-34548696)
chr2 (42-141)||(26136084-26136185)
chr2 (38-90)||(17463354-17463406)
chr2 (38-90)||(23806215-23806267)
chr2 (30-140)||(17463103-17463214)
chr2 (34-163)||(20498737-20498864)
chr2 (39-90)||(22263254-22263305)
chr2 (39-90)||(26560617-26560668)
chr2 (30-123)||(42670974-42671069)
chr2 (32-90)||(19251727-19251785)
chr2 (32-90)||(20499002-20499060)
chr2 (45-141)||(23854698-23854796)
chr2 (46-126)||(21482151-21482232)
chr2 (39-84)||(42670788-42670833)
chr2 (30-70)||(39878185-39878225)
[»] chr1 (32 HSPs)
chr1 (30-140)||(24467640-24467751)
chr1 (30-126)||(4907217-4907315)
chr1 (38-141)||(39826060-39826165)
chr1 (30-141)||(52058263-52058376)
chr1 (30-141)||(18462296-18462408)
chr1 (45-158)||(39826316-39826429)
chr1 (38-126)||(30299494-30299584)
chr1 (30-142)||(48071970-48072084)
chr1 (34-126)||(39711098-39711191)
chr1 (30-90)||(17606371-17606431)
chr1 (39-126)||(20995932-20996020)
chr1 (30-141)||(29696575-29696687)
chr1 (30-90)||(39970900-39970960)
chr1 (39-90)||(17606572-17606623)
chr1 (32-90)||(24467884-24467942)
chr1 (30-142)||(43539356-43539470)
chr1 (30-82)||(13229803-13229855)
chr1 (30-90)||(30299294-30299354)
chr1 (38-141)||(8293070-8293176)
chr1 (38-141)||(4906972-4907077)
chr1 (32-126)||(18462541-18462637)
chr1 (38-141)||(29696821-29696925)
chr1 (38-128)||(30252161-30252253)
chr1 (34-90)||(34749364-34749420)
chr1 (38-90)||(39970709-39970761)
chr1 (34-81)||(33628949-33628996)
chr1 (32-90)||(52058074-52058132)
chr1 (30-95)||(8292862-8292927)
chr1 (39-126)||(16294211-16294300)
chr1 (38-141)||(39711335-39711440)
chr1 (38-90)||(33628753-33628805)
chr1 (38-90)||(34749200-34749252)
[»] scaffold0809 (2 HSPs)
scaffold0809 (30-90)||(1473-1533)
scaffold0809 (38-84)||(1673-1719)
[»] scaffold0141 (1 HSPs)
scaffold0141 (38-90)||(8585-8637)
[»] scaffold0117 (1 HSPs)
scaffold0117 (30-90)||(12237-12297)
[»] scaffold0361 (1 HSPs)
scaffold0361 (38-141)||(4826-4930)
[»] scaffold0477 (1 HSPs)
scaffold0477 (38-139)||(5011-5113)
[»] scaffold0449 (2 HSPs)
scaffold0449 (30-90)||(7454-7514)
scaffold0449 (38-90)||(7289-7341)
[»] scaffold0185 (1 HSPs)
scaffold0185 (30-86)||(4124-4180)


Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 31 - 246
Target Start/End: Complemental strand, 33637681 - 33637466
Alignment:
Q  31 atgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaagactaaaactaaaatttgctaatattatatg 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33637681 atgaaaggagggaccaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaagactaaaactaaaatttgctaatattatatg 33637582  T
Q  131 tacgaaaagagaggtatttatccaaaaatttatctcgtagatagcaatggaaaccaaccaccaacactccctgctcgagattaaaagagaccagcctttc 230  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33637581 tacgaagagagaggtatttatccaaaaatttatctcgtagatagcaatggaaaccaaccaccaacactccctgctcgagattaaaagagaccagcctttc 33637482  T
Q  231 ttggtccaaatatttg 246  Q
    ||||||||||||||||    
T  33637481 ttggtccaaatatttg 33637466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 19284252 - 19284139
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttac-aagactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||| |||| |||||   ||||||||||  |||| ||||||||||     
T  19284252 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacgtggactaaaactggaattcgctaatattac 19284153  T
Q  128 atgtacgaaaagag 141  Q
    ||| ||||||||||    
T  19284152 atgaacgaaaagag 19284139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 32017759 - 32017872
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    |||||||||||||| ||||||||||||||| | |||||||| | |||||||||||||||||  ||||||  |||||||||   |||| |||||||||| |    
T  32017759 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattaca 32017858  T
Q  129 tgtacgaaaagaga 142  Q
     | |||||||||||    
T  32017859 gggacgaaaagaga 32017872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 18500429 - 18500325
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||||||   |||||  |||||||||  ||||| |||||||||||| | |||||    
T  18500429 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttcttacagggactaaaaccgaaattcgctaatattatagggacgaa 18500330  T
Q  137 aagag 141  Q
    |||||    
T  18500329 aagag 18500325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 9481446 - 9481497
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatcttt 9481497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 9854144 - 9854238
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaagactaaaactaaaatttgctaatatta 126  Q
    ||||| |||||| ||||||||||||||| | |||||||||| |||||||||||||  ||| |||   |||||||||| | |||| ||||||||||    
T  9854144 tgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaattattatttttacagactaaaaccagaattcgctaatatta 9854238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 2299564 - 2299617
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatcta 83  Q
    ||||||||||||||| |||||||||||||||| |||||||| | ||||||||||    
T  2299564 gatgaaaggagggataaaaagtggaagaatctgaaattacagggacaaaatcta 2299617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 26385393 - 26385341
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| |||||||||| | |||||||||||||||||    
T  26385393 gagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatcttt 26385341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 33714602 - 33714550
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||||| |||||||||||||||||    
T  33714602 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttt 33714550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 18500602 - 18500641
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattac 69  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  18500602 gatgaaaggagggaccaaaagtggaagaatctaaaattac 18500641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 24732061 - 24732007
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    |||||||||||||| ||||||| ||||||||| |||||||| | |||||||||||    
T  24732061 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 24732007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 14681146 - 14681235
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat-ctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    ||||| |||||||||| |||||||||||| |||| ||||| |||||||  |||| |||||| |||||||| | |||||| ||||||||||    
T  14681146 agggaccaaaagtggaggaatctaaaattgcaaggacaaagtctaaatattttattttacagagactaaagccaaaattcgctaatatta 14681235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 24732201 - 24732253
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  24732201 gagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatcttt 24732253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 26385529 - 26385589
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||| || ||||||||||||||| | ||||| || |||||| ||||||||||||    
T  26385529 gatgaaaggagagaccaaaagtggaagaatatgaaattgcaggaacaacatctaaatcttt 26385589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 30618232 - 30618272
Alignment:
Q  46 aaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  30618232 aaaagtggaagaatctaaaattacagggacaaaatctaaat 30618272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 9154988 - 9154943
Alignment:
Q  45 caaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||| |||||||| | |||||||||||||||||    
T  9154988 caaaactggaagaatctgaaattacagggacaaaatctaaatcttt 9154943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 9481305 - 9481248
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc 87  Q
    |||||||||||||| ||||| ||||||||| | |||||||| | ||| ||||||||||    
T  9481305 gatgaaaggagggaccaaaattggaagaatatgaaattacagggacataatctaaatc 9481248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 30618081 - 30618029
Alignment:
Q  34 aaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||||||| ||||||||||| ||| | |||||||| | |||||||||||||    
T  30618081 aaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaat 30618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 20853951 - 20854064
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaagactaaaactaaaatttgctaatattata 128  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||| |||  |||||| |||||||||  ||||| |||||||||| |    
T  20853951 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacaggactaaaaccgaaattcgctaatattaca 20854050  T
Q  129 tgtacgaaaagaga 142  Q
    || |||||||||||    
T  20854051 tggacgaaaagaga 20854064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 33372529 - 33372415
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaag-actaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||| ||||| |||||||| | |||||||||||||| ||| ||||||| | |||||||| | |||| ||||||||||     
T  33372529 gatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaatctaaatctttttatttacaggaactaaaaccagaattcgctaatattac 33372430  T
Q  128 atgtacgaaaagaga 142  Q
    | | |||||||||||    
T  33372429 agggacgaaaagaga 33372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 17465622 - 17465735
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat-ctttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| |||||||| ||||||||||| ||||| | ||||||| |||||  |||| |||||| ||| ||||||| ||||| ||||||||||     
T  17465622 gatgaaaggagggaccaaaagtgaaagaatctaaagttacagggacaaaatttaaatattttattttacagagattaaaactgaaattcgctaatattac 17465721  T
Q  128 atgtacgaaaagag 141  Q
    | | ||||||||||    
T  17465722 aaggacgaaaagag 17465735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 45003619 - 45003554
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt 95  Q
    ||||||||||||||  |||||||||||||||| |||||||| | ||||||||||||||||| ||||    
T  45003619 gatgaaaggagggacaaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattt 45003554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 52552806 - 52552699
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatct---ttaatttaca-agactaaaactaaaatttgctaatattatatgtacg 134  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||||||   ||  |||||| |||||||||   |||||||||||||||| | | |||    
T  52552806 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctatttttttttacagagactaaaatcgaaatttgctaatattagagggacg 52552707  T
Q  135 aaaagaga 142  Q
    ||||||||    
T  52552706 aaaagaga 52552699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 11003855 - 11003795
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||| |||||    
T  11003855 gatgaaaggatggaccaaaagtggaagaatctgaaattacaaggacaaaatctaagtcttt 11003795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 30500296 - 30500408
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    |||||||||||||| ||||||||||| ||| | |||||||| | ||||||||||||| |||  ||||||  ||||||||||  |||| |||||||||| |    
T  30500296 gatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaattttttttttacagggactaaaactggaattcgctaatattaca 30500395  T
Q  129 tgtacgaaaagag 141  Q
     | ||||||||||    
T  30500396 gggacgaaaagag 30500408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 43572512 - 43572456
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||    
T  43572512 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 43572456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 52552943 - 52553055
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt-acaag-actaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||||||| | ||||||||   |||||||||||||||||  ||| ||| | |||||||||| |||| ||||||||||     
T  52552943 gatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgctaatattac 52553042  T
Q  128 atgtacgaaaaga 140  Q
    | | |||||||||    
T  52553043 aaggacgaaaaga 52553055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 4204829 - 4204719
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaag-actaaaactaaaatttgctaatattatatg 130  Q
    ||||| |||||| ||||||||||||||||| |||||||| | ||| |||||||||||||  |||||| | ||||||||| |||||   |||||||| | |    
T  4204829 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttacaggaactaaaactgaaattcattaatattacagg 4204730  T
Q  131 tacgaaaagag 141  Q
     ||||||||||    
T  4204729 gacgaaaagag 4204719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 33372669 - 33372719
Alignment:
Q  40 gggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  33372669 gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 33372719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 14162135 - 14162184
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatct 88  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatct 14162184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 14171841 - 14171954
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||| ||| ||||||||||||||||  |||||||| | |||||||||||||| ||| |||||||  |||||||||   |||| ||||||||||     
T  14171841 gatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattac 14171940  T
Q  128 atgtacgaaaagag 141  Q
    | | ||||||||||    
T  14171941 agggacgaaaagag 14171954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 14161994 - 14161934
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||| | |||||||| | ||| |||||||||||||    
T  14161994 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacataatctaaatcttt 14161934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 14171701 - 14171649
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||||||| | |||||||| | |||||||||||||||||    
T  14171701 gagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttt 14171649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 16722114 - 16722058
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||||| ||||| ||||||||||||||||| |||||||| | |||||||||||||    
T  16722114 gatgaaagaagggaccaaaagtggaagaatctgaaattacatggacaaaatctaaat 16722058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 16722255 - 16722359
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatt-taca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    ||||| ||||||||||||||| | |||||||| | |||||||||||||||||  || ||||  |||||||||| ||||| |||||||||| | | |||||    
T  16722255 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaactgaaattcgctaatattacagggacgaa 16722354  T
Q  137 aagag 141  Q
    |||||    
T  16722355 aagag 16722359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 19113020 - 19113080
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||| ||||||||| |||||||| | | |||||||||||||||    
T  19113020 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggataaaatctaaatcttt 19113080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 21633159 - 21633211
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||||| |||||||| | |||||||||||||||||    
T  21633159 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 21633211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 38283673 - 38283617
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||||||||||||||||||||||| ||| | |||||| | |||||||||||||||    
T  38283673 gatgaaaggagggatcaaaagtggaacaatatgaaattataggaacaaaatctaaat 38283617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 45970038 - 45969978
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||| || |||||||| |||||||| |||||||| | |||||||||||||||||    
T  45970038 gatgaaaggagagaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatcttt 45969978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 49986651 - 49986591
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||| || ||||||| ||||||||| |||||||| | |||||||||||||||||    
T  49986651 gatgaaaggagagaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttt 49986591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 5800869 - 5800920
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||| | |||||||||| |||||||||||||||||    
T  5800869 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttt 5800920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 14262150 - 14262045
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat-ctttaatttacaa-gactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    ||||| ||||||||||||||||| |||||||| | |||||||||||||  |||  ||||||| |||||||||   |||| |||||||||| | | |||||    
T  14262150 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatatttttttttacaaggactaaaaccggaattcgctaatattacagggacgaa 14262051  T
Q  137 aagaga 142  Q
    ||||||    
T  14262050 aagaga 14262045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 4204971 - 4205022
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||||||||| ||| ||||| || |||||||||||||||    
T  4204971 gagggatcaaaagtggaagaatctgaaa-tacaataataaaatctaaatcttt 4205022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 9267090 - 9267038
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  9267090 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 9267038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 14262291 - 14262351
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||||||  |||||||||| ||| | |||||||| | |||||||||||||||||    
T  14262291 gatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaatctaaatcttt 14262351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 21633019 - 21632959
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| |||||||| |||||||| |||||||| | |||| ||||| ||||||    
T  21633019 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaacatctagatcttt 21632959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 38283805 - 38283861
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||||  ||||||||||||||||||||||| |||||| | | |||||||||||||    
T  38283805 gatgaaataagggatcaaaagtggaagaatctgaaattatagggacaaaatctaaat 38283861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 45058755 - 45058843
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttac-aagactaaaactaaaatttgctaatatta 126  Q
    ||||||||||| ||||||||||| ||||||||   ||||||||||||||| |  |||||   ||||||||||| |||| ||||||||||    
T  45058755 agggatcaaaaatggaagaatctgaaattacagagacaaaatctaaatctcttttttacggggactaaaactagaattcgctaatatta 45058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 9267230 - 9267285
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaa 85  Q
    |||||||||||||| ||||||| ||||||||| | |||||| | ||||||||||||    
T  9267230 gatgaaaggagggaccaaaagtagaagaatctgatattacagggacaaaatctaaa 9267285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 15328724 - 15328775
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||| ||||| |||||||| | |||||||||||||||||    
T  15328724 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttt 15328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 35995793 - 35995746
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaa 85  Q
    |||||| ||||||||||||||||| |||||||| | ||||||||||||    
T  35995793 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 35995746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 47575387 - 47575336
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| |||||||| |||||| ||||||||||  ||||||||||||||||||    
T  47575387 agggaccaaaagtgaaagaatataaaattacataaacaaaatctaaatcttt 47575336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 43572648 - 43572702
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    ||||| |||||| ||||||||||||||||| |||||||| | ||| |||||||||    
T  43572648 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaaat 43572702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 5800728 - 5800671
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc 87  Q
    |||||||||||||| ||||| ||||||||| | |||||||| | ||| ||||||||||    
T  5800728 gatgaaaggagggaccaaaaatggaagaatatgaaattacagggacataatctaaatc 5800671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 36990931 - 36991012
Alignment:
Q  46 aaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    ||||||||||||||||||||||||| | ||| ||||||||  |||  ||||||  |||||||||  ||||| ||||||||||    
T  36990931 aaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatatta 36991012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 37016371 - 37016452
Alignment:
Q  46 aaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    ||||||||||||||||||||||||| | ||| ||||||||  |||  ||||||  |||||||||  ||||| ||||||||||    
T  37016371 aaaagtggaagaatctaaaattacagggacagaatctaaactttttttttacagggactaaaaccgaaattcgctaatatta 37016452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 45003759 - 45003848
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaag-actaaaactaaaatttgctaatatta 126  Q
    |||||| ||||||||||||||| | |||||| | | || ||||||||||||||  |||||| | ||||||||  ||||| ||||||||||    
T  45003759 gagggaccaaaagtggaagaatatgaaattatagggactaaatctaaatcttttttttacaggaactaaaaccgaaattcgctaatatta 45003848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 45970185 - 45970230
Alignment:
Q  45 caaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||||    
T  45970185 caaaagtggaagaatctgaaattacagggacaaaatttaaatcttt 45970230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 17649269 - 17649325
Alignment:
Q  34 aaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||| || |||| |||||| ||||| |||||||| | |||||||||||||||||    
T  17649269 aaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaaatcttt 17649325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 20853811 - 20853759
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||| | | |||||||||||||||||    
T  20853811 gagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatcttt 20853759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 30500155 - 30500068
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    ||||| ||||||||||||||| | |||||||| | ||||||||||||| |||  ||||||  |||||||||  ||||| ||||||||||    
T  30500155 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat-ttttttttacagggactaaaaccgaaattcgctaatatta 30500068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 49986791 - 49986838
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||| ||||||||||||||| | |||||||||| |||||||||||||    
T  49986791 gagggaccaaaagtggaagaatatgaaattacaag-acaaaatctaaat 49986838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 31799895 - 31800007
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaagactaaaactaaaatttgctaatattata 128  Q
    ||||||||||||||||||||| |||||||||| |||||||| | |||||||||||||| |||  |||||| |||||||||   |||| ||||||||||||    
T  31799895 gatgaaaggagggatcaaaagaggaagaatctgaaattacatggacaaaatctaaatctttttttttacaggactaaaaccggaattcgctaatattata 31799994  T
Q  129 tgtacgaaaagag 141  Q
     | ||||||||||    
T  31799995 gggacgaaaagag 31800007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 29445070 - 29445174
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaagactaaaactaaaatttgctaatattatatgtacgaaa 137  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||| |||  |||||| ||||||||||  |||| |||||||||| | | ||||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttttacaggactaaaactggaattcgctaatattacagggacgaaa 29445169  T
Q  138 agaga 142  Q
    |||||    
T  29445170 agaga 29445174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 41001608 - 41001705
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaa-gactaaaactaaaatttgctaatatta 126  Q
    |||||||||||||| ||||||||||||||||| |||||| | | |||||||||||||||||  ||||||| |||||||||   |||| ||||||||||    
T  41001608 gatgaaaggagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatcttttttttacaaggactaaaaccggaattcgctaatatta 41001705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 18336591 - 18336531
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||||||||||||| |||||||||| |||||||| | |||||||||||||||||    
T  18336591 gatgaaaggagggatcaaaagcggaagaatctgaaattacagggacaaaatctaaatcttt 18336531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 20709467 - 20709579
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    |||||||||| |||  |||||||||||||| | |||||||| | |||||||||||||||||  ||||||  ||||||||| |||||| | |||||||| |    
T  20709467 gatgaaaggaaggacaaaaagtggaagaatatgaaattacatggacaaaatctaaatcttttttttacagggactaaaaccaaaattcgttaatattaca 20709566  T
Q  129 tgtacgaaaagag 141  Q
    || ||||||||||    
T  20709567 tggacgaaaagag 20709579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 27159104 - 27159001
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttac-aagactaaaactaaaatttgctaatattatatgtacgaaa 137  Q
    ||||| ||||||||||||||||| |||||||| | ||||||| |||||||||  || ||  ||||||||||| ||||| |||||||||| ||| ||||||    
T  27159104 agggaccaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttaactgagactaaaactgaaattcgctaatattacatggacgaaa 27159005  T
Q  138 agag 141  Q
    ||||    
T  27159004 agag 27159001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 17762401 - 17762308
Alignment:
Q  34 aaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    |||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||||  ||||||  |||||||||   |||| ||||||||||    
T  17762401 aaaggagggaccaaaagtggaagaatctgaaattacaggaacaaaatataaatcttttttttacagggactaaaaccggaattcgctaatatta 17762308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 24650954 - 24651007
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatcta 83  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||||    
T  24650954 gatgaaaggagggatcaaaagtggaagaatctaaaattacagggataaaatcta 24651007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 27159212 - 27159322
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaa-gactaaaactaaaatttgctaatattata 128  Q
    |||||||| ||||| ||||| ||||||||| |||||||||| | ||||||||||||| |||  ||||||| |||||||||  ||||| |||||||||| |    
T  27159212 gatgaaagaagggaccaaaaatggaagaatataaaattacagggacaaaatctaaattttt--tttacaaggactaaaaccgaaattcgctaatattaca 27159309  T
Q  129 tgtacgaaaagag 141  Q
     | ||||||||||    
T  27159310 aggacgaaaagag 27159322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 7126172 - 7126232
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  7126172 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 7126232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 18336720 - 18336771
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 18336771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 4919245 - 4919299
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    |||||||||||||||||||||| ||||||||| |||||||| | |||||||||||    
T  4919245 gatgaaaggagggatcaaaagtagaagaatctgaaattacagggacaaaatctaa 4919299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 6817376 - 6817474
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaa-tctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    ||||||||||| || ||||||||||||||| | |||||||| | |||||||||||| | |||  |||||| ||||||||| ||||||| ||||||||||    
T  6817376 gatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaaatttttttttttacagagactaaaattaaaattcgctaatatta 6817474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 24074426 - 24074313
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat-ctttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||||||| | ||||||||   |||||||||||||  |||  ||||||  |||||||||  ||||| ||||||||||     
T  24074426 gatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttacagggactaaaaccgaaattcgctaatattac 24074327  T
Q  128 atgtacgaaaagag 141  Q
    ||| ||||||||||    
T  24074326 atggacgaaaagag 24074313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 24837424 - 24837537
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||| ||||||| | |||||||| | |||||||||||||| |||  ||||||  ||||||||||  |||| ||||||||||     
T  24837424 gatgaaaggagggagcaaaagtagaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcgctaatattac 24837523  T
Q  128 atgtacgaaaagag 141  Q
    | | ||||||||||    
T  24837524 agggacgaaaagag 24837537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 994005 - 994061
Alignment:
Q  34 aaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||| |||||||||||||||||  ||||||| | |||||||||||||||||    
T  994005 aaaggagggaccaaaagtggaagaatctgcaattacagggacaaaatctaaatcttt 994061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 14144024 - 14143912
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    ||||||| |||| | ||||||||||||||| | |||||||| | |||||||||||||||||  ||||||  |||||||||   |||| |||||||||| |    
T  14144024 gatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattaca 14143925  T
Q  129 tgtacgaaaagag 141  Q
     | ||||||||||    
T  14143924 gggacgaaaagag 14143912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 14411820 - 14411760
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||||| ||||||||   ||||||| |||||||||    
T  14411820 gatgaaaggagggaccaaaagtggaagaatctgaaattacatagacaaaatataaatcttt 14411760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 24837284 - 24837232
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||||| |||||||||||||||||    
T  24837284 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttt 24837232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 14411929 - 14412020
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    |||||| |||| |||||||||||| |||||||||| ||||||||||||| |||  ||||||  |||||||||  ||||| | ||||||||||    
T  14411929 gagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaaattttttttttacagggactaaaaccgaaattcgttaatattata 14412020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 24074566 - 24074617
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||| | |||||||||| |||||||||||||||||    
T  24074566 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttt 24074617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 31799754 - 31799703
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||||| |||||||| | |||||||||||||||||    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 31799703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 6817243 - 6817185
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| |||||| ||||||||||||||||| |||||||| | ||| |||||||||||||    
T  6817243 tgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatcttt 6817185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 159
Target Start/End: Original strand, 23979158 - 23979285
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt-acaag-actaaaactaaaatttgctaatattatat 129  Q
    ||||| |||||| ||||||||||||||| | |||||||| | |||||||||||||||||  ||| ||| | ||||||||   |||| |||||||||| |     
T  23979158 tgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacag 23979257  T
Q  130 gtacgaaaagagaggtatttatccaaaaat 159  Q
    | ||||||||||  ||||||| ||||||||    
T  23979258 ggacgaaaagag--gtatttacccaaaaat 23979285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 24650808 - 24650763
Alignment:
Q  45 caaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||    
T  24650808 caaaagtggaagaatatgaaattacaggaacaaaatctaaatcttt 24650763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 29444929 - 29444872
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc 87  Q
    |||||||||||||| ||||||| ||||||| | |||||||||| ||| ||||||||||    
T  29444929 gatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatctaaatc 29444872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 30512402 - 30512297
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| ||||||||||| ||||| |||||||| | || ||||||||||| ||  ||||||  ||||||||| ||||||  ||||||||| | | |||||    
T  30512402 gagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaaccaaaattcactaatattacagggacgaa 30512303  T
Q  137 aagaga 142  Q
    ||||||    
T  30512302 aagaga 30512297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 30552742 - 30552637
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| ||||||||||| ||||| |||||||| | || ||||||||||| ||  ||||||  ||||||||| ||||||  ||||||||| | | |||||    
T  30552742 gagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaaccaaaattcactaatattacagggacgaa 30552643  T
Q  137 aagaga 142  Q
    ||||||    
T  30552642 aagaga 30552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 4919105 - 4919053
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  4919105 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 4919053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 7126031 - 7125980
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||||| |||||| | | |||||||||||||||||    
T  7126031 agggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatcttt 7125980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 14144165 - 14144216
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  14144165 agggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatcttt 14144216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 20709333 - 20709275
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| |||||| ||||||||||||||| | |||||||| | ||| |||||||||||||    
T  20709333 tgaaatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaaatcttt 20709275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 17762545 - 17762597
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||||| ||||||   | |||||||||||||||||    
T  17762545 gagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatcttt 17762597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 7819137 - 7819025
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaagactaaaactaaaatttgctaatattata 128  Q
    |||||||||||| | ||||||||||||||||| |||||||| | |||||||||||||| ||| ||||||| |||||||||   |||| ||||||||||||    
T  7819137 gatgaaaggaggaaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacatgactaaaaccggaattcgctaatattata 7819038  T
Q  129 tgtacgaaaagag 141  Q
    ||  |||||||||    
T  7819037 tggtcgaaaagag 7819025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 46046679 - 46046739
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  46046679 gatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 46046739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 9516865 - 9516979
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||| ||||||||| |||||||| | |||||||||||||| |||  |||||| ||||||||||  ||||| ||||||||||     
T  9516865 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattac 9516964  T
Q  128 atgtacgaaaagaga 142  Q
    | | |||||||||||    
T  9516965 agggacgaaaagaga 9516979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 12904854 - 12904756
Alignment:
Q  45 caaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaaaagaga 142  Q
    ||||||||||||||||| |||||| ||| ||||||||||||| |||  ||||||  ||||||||| |||||| |||||||||||| | |||||||||||    
T  12904854 caaaagtggaagaatctgaaattataaggacaaaatctaaattttttttttacagggactaaaaccaaaattcgctaatattatagggacgaaaagaga 12904756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 35376285 - 35376188
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    ||||||||||| || ||||||||||||||||||||||||||   |||||||||||||||||  ||||||  ||||||||| | |||| ||||||||||    
T  35376285 gatgaaaggagagaccaaaagtggaagaatctaaaattacagagacaaaatctaaatcttttttttacagggactaaaaccagaattcgctaatatta 35376188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 9619103 - 9619043
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||||    
T  9619103 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 9619043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 13132062 - 13132004
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  13132062 tgaaatgagggatcaaaagtggaagaatctgaaattacatgaacataatctaaatcttt 13132004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 38574223 - 38574321
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    |||||||||||||| ||||||||||||||| | |||||||| | |||||||||||||| ||| |||||||  ||||||||| | |||| ||||||||||    
T  38574223 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccagaattcgctaatatta 38574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 35376391 - 35376496
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| ||||||||||||| ||| |||||||| | ||||||| |||||||||  ||||||  ||||||||||  ||||||||||||||| | | |||||    
T  35376391 gagggaccaaaagtggaagattctgaaattacagggacaaaatttaaatcttttttttacagggactaaaactggaatttgctaatattacagggacgaa 35376490  T
Q  137 aagaga 142  Q
    ||||||    
T  35376491 aagaga 35376496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 48260018 - 48260119
Alignment:
Q  42 gatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaaaaga 140  Q
    |||||||||||||||||| | |||||||| | |||||||||||||||||  |||||| ||| |||||  |||||| |||||||||| | | |||||||||    
T  48260018 gatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttacagagattaaaatcaaaattcgctaatattacagggacgaaaaga 48260117  T
Q  141 ga 142  Q
    ||    
T  48260118 ga 48260119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 3018135 - 3018075
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  3018135 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 3018075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 9396969 - 9397065
Alignment:
Q  45 caaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaaaaga 140  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||  ||||||  |||||||||   ||||||||||||||| | | |||||||||    
T  9396969 caaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaatttgctaatattacagggacgaaaaga 9397065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 13132196 - 13132292
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaagactaaaactaaaatttgctaatatta 126  Q
    |||||||| ||||| ||||||||||||||| | |||||||| | ||| |||||||||||||  |||||| ||||||||   ||||| ||||||||||    
T  13132196 gatgaaagaagggaccaaaagtggaagaatatgaaattacagggacagaatctaaatcttttttttacaggactaaaatcgaaattcgctaatatta 13132292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 15640838 - 15640726
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaag-actaaaactaaaatttgctaatattata 128  Q
    |||||||||||||| |||||||| |||||| | |||||||| | |||||||||||||||||  |||||| | ||||||||   |||| |||||||||| |    
T  15640838 gatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattaca 15640739  T
Q  129 tgtacgaaaagag 141  Q
     | ||||||||||    
T  15640738 gggacgaaaagag 15640726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 3273877 - 3273972
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    ||||| |||||||||||||||||||||||| |||||||| | | |||||||||||||||  |||| |  |||||||||  ||||| ||||||||||    
T  3273877 tgaaatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatcttttttttatagggactaaaaccgaaattcgctaatatta 3273972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 9516725 - 9516619
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaa-gactaaaactaaaatttgctaatattatatgtacga 135  Q
    |||||| ||||||||||||||| | |||||||||| |||||||||||||| |||  ||||||| |||||||||   |||| |||||||||| | | ||||    
T  9516725 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaaccggaattcgctaatattacagggacga 9516626  T
Q  136 aaagaga 142  Q
    |||||||    
T  9516625 aaagaga 9516619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 26252391 - 26252337
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  26252391 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 36888951 - 36889033
Alignment:
Q  46 aaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaagactaaaactaaaatttgctaatattata 128  Q
    ||||||||| |||||| |||||||| | ||| ||||||||| |||  |||||| ||||||||| |||||| ||||||||||||    
T  36888951 aaaagtggaggaatctgaaattacagggacataatctaaattttttttttacaggactaaaaccaaaattcgctaatattata 36889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 34064237 - 34064302
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt 95  Q
    |||||||| ||||| ||||||||||||||||| ||||||||   ||||||||||||||||| ||||    
T  34064237 gatgaaagaagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatcttttattt 34064302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 31944073 - 31944013
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||| || ||||||||||||||| | |||||||| | |||||||||||||||||    
T  31944073 gatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 31944013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 37012821 - 37012717
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaa-gactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    ||||| ||||||||||||||||| |||||||| | |||||||||||||| |||  ||||||| |||| ||| || |||| |||||||||| | | |||||    
T  37012821 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacaaggactgaaattagaattcgctaatattacaaggacgaa 37012722  T
Q  137 aagag 141  Q
    |||||    
T  37012721 aagag 37012717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 9396822 - 9396698
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt-aca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||| ||| | |||||| | | |||||||||||||||||  ||| ||| |||||||||   ||||| ||||||||||     
T  9396822 gatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaatctaaatcttttttttaacagagactaaaatcgaaattcgctaatattac 9396723  T
Q  128 atgtacgaaaagagaggtatttatcca 154  Q
    | | ||||||  |||||||||||||||    
T  9396722 agggacgaaa--agaggtatttatcca 9396698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 41947112 - 41947223
Alignment:
Q  31 atgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaagactaaaactaaaatttgctaatattatatg 130  Q
    ||||||| ||||| ||||||||||| ||| | |||||||||| ||||||||||| | |||  || | | |||||||||  ||||| |||||||||| | |    
T  41947112 atgaaagcagggaccaaaagtggaaaaatatgaaattacaaggacaaaatctaattttttttttaaaaggactaaaaccgaaattcgctaatattacagg 41947211  T
Q  131 tacgaaaagaga 142  Q
     |||||||||||    
T  41947212 gacgaaaagaga 41947223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 31090316 - 31090370
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    |||||||||||||| ||||||| ||||||||| |||||||| | |||||||||||    
T  31090316 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 31090370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 3273745 - 3273692
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatcta 83  Q
    |||||||||||||| ||||||||||||||| | |||||||| | ||||||||||    
T  3273745 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatcta 3273692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 9619249 - 9619294
Alignment:
Q  45 caaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||||||| | |||||||||| |||||||||||||||||    
T  9619249 caaaagtggaagaatatgaaattacaaggacaaaatctaaatcttt 9619294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 34064097 - 34063992
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt-acaag-actaaaactaaaatttgctaatattatatgtacga 135  Q
    |||||| ||||||||||||||||| ||||||||   |||||||||||||||||  ||| ||| | |||||||||| |||| | |||||||| | | ||||    
T  34064097 gagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgttaatattacagggacga 34063998  T
Q  136 aaagag 141  Q
    ||||||    
T  34063997 aaagag 34063992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 48580121 - 48580178
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc 87  Q
    |||||||||||||| ||||||||||| ||| | |||||||| | ||||||||||||||    
T  48580121 gatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatc 48580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 26252502 - 26252606
Alignment:
Q  40 gggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaag-actaaaactaaaatttgctaatattatatgtacgaaa 137  Q
    |||| ||||||||||||||| | |||||||| | |||||||||||||| |||  |||||| | |||||||||  |||| |||||||||| | | ||||||    
T  26252502 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaactggaattcgctaatattacagggacgaaa 26252601  T
Q  138 agaga 142  Q
    |||||    
T  26252602 agaga 26252606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 31090176 - 31090124
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  31090176 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 31090124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 38574083 - 38574031
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  38574083 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 38574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 15640972 - 15641030
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| |||| | ||||||||||||||||| |||||||| | ||| |||||||||||||    
T  15640972 tgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatcttt 15641030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 37012962 - 37013016
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    ||||||||||| || ||||||||||||||| | |||||||| | |||||||||||    
T  37012962 gatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaa 37013016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 18713083 - 18713026
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc 87  Q
    |||||||||||||| ||||| ||||| ||| | |||||||| | ||||||||||||||    
T  18713083 gatgaaaggagggaccaaaattggaacaatatgaaattacagggacaaaatctaaatc 18713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 46046539 - 46046494
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatcta 83  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||    
T  46046539 gagggatcaaaagtggaagaatatgaaattacagggacaaaatcta 46046494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 4356004 - 4355892
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaag-actaaaactaaaatttgctaatattata 128  Q
    ||||||| |||||| |||||||| |||||| | ||||||||   |||||||||||| |||   |||||| | ||||||||   |||| ||||||||||||    
T  4356004 gatgaaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaatctaaagcttgtttttacaggaactaaaaccggaattcgctaatattata 4355905  T
Q  129 tgtacgaaaagag 141  Q
    || || |||||||    
T  4355904 tgaacaaaaagag 4355892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 6465977 - 6465868
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| |||  ||||||  |||||||||   |||| |||||||||| |    
T  6465977 gatgaaaggagggaccaaaagtggaagaatctgaaattacaagaacataatctaaatattttttttacagggactaaaaccggaattcgctaatattaca 6465878  T
Q  129 tgtacgaaaa 138  Q
    || |||||||    
T  6465877 tggacgaaaa 6465868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 10409497 - 10409388
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaagactaaaactaaaatttgctaatattata 128  Q
    |||||||| |||||  |||||| ||||||||| |||||||||| |||||||||||||| ||| |||||||| |||||| | |||||| |||||||||| |    
T  10409497 gatgaaagaagggactaaaagtagaagaatctgaaattacaaggacaaaatctaaatctttttatttacaacactaaacccaaaattcgctaatattaca 10409398  T
Q  129 tgtacgaaaa 138  Q
    || |||||||    
T  10409397 tggacgaaaa 10409388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 38879981 - 38880089
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaagactaaaactaaaatttgctaatattatatgt 131  Q
    |||||||||||| ||||||||||||||||| |||||||| | ||||||||||||| |||  |||| |||||||||||   ||||||||||||||| | |     
T  38879981 tgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttttttttta-aagactaaaaccggaatttgctaatattacaggg 38880079  T
Q  132 acgaaaagag 141  Q
    ||||||||||    
T  38880080 acgaaaagag 38880089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 1250461 - 1250575
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||||||| | |||||| | | |||||||||||||| |||| |||||| |||||||||||  |||| ||||||||||     
T  1250461 gatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaatctaaatcttttagtttacagagactaaaactggaattcgctaatattac 1250560  T
Q  128 atgtacgaaaagaga 142  Q
    | | |||||||||||    
T  1250561 aaggacgaaaagaga 1250575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 12006795 - 12006908
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||| ||| |||||||  ||||||||    |||| ||||||||||     
T  12006795 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaatcggaattcgctaatattac 12006894  T
Q  128 atgtacgaaaagag 141  Q
    ||| ||||||||||    
T  12006895 atgaacgaaaagag 12006908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 28218418 - 28218531
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||| ||| |||||||  |||||||||   |||| ||||||||||     
T  28218418 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattac 28218517  T
Q  128 atgtacgaaaagag 141  Q
    | | ||||||||||    
T  28218518 agggacgaaaagag 28218531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 41600213 - 41600273
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||||    
T  41600213 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 41600273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 25772586 - 25772700
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt-acaag-actaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||| ||||||||| |||||||| | |||||||||||||||||  ||| ||| | |||||||||  ||||  ||||||||||    
T  25772586 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcactaatattat 25772685  T
Q  128 atgtacgaaaagaga 142  Q
    | | |||||||||||    
T  25772686 agggacgaaaagaga 25772700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 48672534 - 48672632
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    |||||||||||||| ||||||||||||||||| |||||||| | | |||||||||||| ||| |||||||  |||||||||  ||||| ||||||||||    
T  48672534 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatatta 48672632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 10409637 - 10409689
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  10409637 gagggatcaaaagtggaagaatctaaaattacagagacaaaatctaaatcttt 10409689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 20419791 - 20419851
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||| ||||||||| |||||||| | |||||||||||||||||    
T  20419791 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttt 20419851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 23704784 - 23704724
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||||| |||||||| | ||||||| |||||||||    
T  23704784 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatgtaaatcttt 23704724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 25772478 - 25772374
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| ||||||||||||||| | |||||||||| |||||||||||||||||  |||||| | |||||||   ||||| |||||||||| | | |||||    
T  25772478 gagggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagaaactaaaatcgaaattcgctaatattacagggacgaa 25772379  T
Q  137 aagag 141  Q
    |||||    
T  25772378 aagag 25772374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 48648484 - 48648544
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| || |||||||||||||||||||||||   |||||||||||||||||    
T  48648484 gatgaaaggagggaccagaagtggaagaatctaaaattacatagacaaaatctaaatcttt 48648544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 20458950 - 20459006
Alignment:
Q  34 aaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||| ||||||||||||||||| ||||||||   |||||||||||||||||    
T  20458950 aaaggagggaccaaaagtggaagaatctgaaattacagtgacaaaatctaaatcttt 20459006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 20963610 - 20963558
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| |||||||||||||||||||||||||| | || ||||||||||||||    
T  20963610 gagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatcttt 20963558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 23383755 - 23383815
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| |||| |||||||||| | |||||||| | |||||||||||||||||    
T  23383755 gatgaaaggagggaccaaaggtggaagaatatgaaattacagggacaaaatctaaatcttt 23383815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 24195059 - 24195111
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||||| |||||||||||||||||    
T  24195059 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttt 24195111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 28218294 - 28218242
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||||| |||||||| | |||||||||||||||||    
T  28218294 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 28218242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 16995312 - 16995225
Alignment:
Q  40 gggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaag-actaaaactaaaatttgctaatatta 126  Q
    |||| ||||||||||||||||| |||||||| | ||||||||||||| |||  |||||| | ||||||||  ||||| ||||||||||    
T  16995312 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatattttttttacaggaactaaaaccgaaattcgctaatatta 16995225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 12006655 - 12006609
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||    
T  12006655 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaa 12006609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 44816950 - 44816834
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt---aca-agactaaaactaaaatttgctaatattatatgtac 133  Q
    |||||| ||||||||||||||||| |||||||| | |||||||| ||||||||  |||   ||| ||||||||||  ||||| |||||||||| | | ||    
T  44816950 gagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaaatctttttttttttacagagactaaaaccgaaattcgctaatattacagggac 44816851  T
Q  134 gaaaagagaggtattta 150  Q
    || || |||||||||||    
T  44816850 gagaaaagaggtattta 44816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 23704924 - 23705013
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||||||  ||||||  |||||||||   |||| ||||||||||    
T  23704924 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatatta 23705013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 7658224 - 7658276
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatct 82  Q
    ||||||||||| || ||||||||||||||||| |||||||| | |||||||||    
T  7658224 gatgaaaggagagaccaaaagtggaagaatcttaaattacagggacaaaatct 7658276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 20458806 - 20458746
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca 98  Q
    |||||| ||||||||||||||||| ||||||||   ||||||||||||| ||| |||||||    
T  20458806 gagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaattttttatttaca 20458746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 38879839 - 38879787
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  38879839 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 38879787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 41600073 - 41600025
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    ||||||||||| |||||||||||| |||||||| | |||||||||||||    
T  41600073 gagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaat 41600025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 48672394 - 48672342
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||||||||| ||||||||   || ||||||||||||||    
T  48672394 gagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaatcttt 48672342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 1250314 - 1250215
Alignment:
Q  45 caaaagtggaagaatctaaaattacaagaacaaaatctaaat-ctttaatttacaa-gactaaaactaaaatttgctaatattatatgtacgaaaagaga 142  Q
    |||||||||||||||||||||||| ||| ||||||| |||||  |||  ||||||| || |||||||||||||  |||||||| ||   |||||||||||    
T  1250314 caaaagtggaagaatctaaaattaaaaggacaaaatttaaataattttttttacaaggattaaaactaaaattcactaatattttagagacgaaaagaga 1250215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 31851494 - 31851548
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    ||||||||||| || ||||||||||||||| | |||||||| | |||||||||||    
T  31851494 gatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 20419651 - 20419546
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt-acaag-actaaaactaaaatttgctaatattatatgtacga 135  Q
    |||||| ||||| ||||||||| | |||||||| | |||||||||||||||||  ||| ||| | ||||||||   |||| |||||||||||| | ||||    
T  20419651 gagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattatagggacga 20419552  T
Q  136 aaagag 141  Q
    ||||||    
T  20419551 aaagag 20419546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 7658094 - 7658034
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||| ||| |||||||| |||||| | |||||||| | ||| |||||||||||||    
T  7658094 gatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataatctaaatcttt 7658034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 17623002 - 17622900
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||  |||||||||| ||||| |||||||||| | | |||||    
T  17623002 gagggaccaaaagtggaagaatctaaaattac-agaacaaaatctaaatcttt-ttttacagggactaaaactgaaattcgctaatattacaaggacgaa 17622905  T
Q  137 aagag 141  Q
    |||||    
T  17622904 aagag 17622900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 17623142 - 17623239
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaag-actaaaactaaaatttgctaatatta 126  Q
    ||||||||||| || ||||||||||||||| | |||||||||| |||||||||||||||||  |||||| | |||||||| | |||| ||||||||||    
T  17623142 gatgaaaggagtgaccaaaagtggaagaatttgaaattacaaggacaaaatctaaatcttttttttacaggcactaaaaccagaattggctaatatta 17623239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 14820417 - 14820305
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaag-actaaaactaaaatttgctaatattata 128  Q
    |||||||||||||| ||||||||||||||| | |||||||| | |||||||||||||||||  |||||| | ||||||||   |||| |||||||||| |    
T  14820417 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattaca 14820318  T
Q  129 tgtacgaaaagag 141  Q
     | ||||||||||    
T  14820317 gggacgaaaagag 14820305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 43851779 - 43851675
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||||||  ||||||  |||||||||   |||| |||||||||| | | |||||    
T  43851779 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttgtttacagggactaaaaccggaattcgctaatattacagggacgaa 43851680  T
Q  137 aagag 141  Q
    |||||    
T  43851679 aagag 43851675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 2583443 - 2583345
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaag-actaaaactaaaatttgctaatatta 126  Q
    |||||||||||||||||||||| ||||||||  |||||||| | |||||||||||||| |||| |||||||| |||||||   ||||| ||||||||||    
T  2583443 gatgaaaggagggatcaaaagtagaagaatccgaaattacagggacaaaatctaaatcttttattttacaagaactaaaatcgaaattcgctaatatta 2583345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 7689646 - 7689534
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaa-gactaaaactaaaatttgctaatattat 127  Q
    ||||||| |||||| ||||||||||||||||| |||||||||| || ||||||||||| ||| |||||||| ||||||| |  ||||| ||||||||||     
T  7689646 gatgaaaagagggaccaaaagtggaagaatctgaaattacaaggac-aaatctaaatctttttatttacaaggactaaagccgaaattcgctaatattac 7689548  T
Q  128 atgtacgaaaagag 141  Q
    | | ||||||||||    
T  7689547 agggacgaaaagag 7689534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 26136808 - 26136695
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaa-tctttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||| | |||  ||||||  ||||||||||  |||| ||||||||||     
T  26136808 gatgaaaggaggaatcaaaattggaagaatctgaaattacaaggacaaaatctaaatttttttttttacagggactaaaactggaattcgctaatattac 26136709  T
Q  128 atgtacgaaaagag 141  Q
    | | ||||||||||    
T  26136708 aggaacgaaaagag 26136695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 10108493 - 10108433
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  10108493 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 10108433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 30789762 - 30789875
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    ||||||| || ||| ||||||||||||||||| |||||||| | |||||||||||||| ||| |||||||  |||||||||   ||||| |||||||||     
T  30789762 gatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaatttactaatattac 30789861  T
Q  128 atgtacgaaaagag 141  Q
    | | ||||||||||    
T  30789862 agggacgaaaagag 30789875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 5555133 - 5555237
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    ||||| ||||||||||||||| | |||||||| | |||||||||||||| |||  |||||| ||||||||||  ||||| |||||||||| | | |||||    
T  5555133 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacgaa 5555232  T
Q  137 aagag 141  Q
    |||||    
T  5555233 aagag 5555237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 7689786 - 7689838
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||||||||| |||||||| | ||||||| |||||||||    
T  7689786 gagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatcttt 7689838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 21148051 - 21148000
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||||| |||||||| | |||||||||||||||||    
T  21148051 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 21148000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 38726802 - 38726755
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaa 85  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  38726802 gagggatctaaagtggaagaatctgaaattacaaggacaaaatctaaa 38726755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 21148191 - 21148245
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    ||||||||||||||  |||||||||||||| | |||||||||| |||||||||||    
T  21148191 gatgaaaggagggactaaaagtggaagaatatgaaattacaaggacaaaatctaa 21148245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 30789628 - 30789570
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||||| |||||| ||||||||   |||||||||||||||||    
T  30789628 tgaaatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaaatcttt 30789570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 10108634 - 10108738
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt-acaag-actaaaactaaaatttgctaatattatatgtacgaa 136  Q
    ||||| ||||||||||||||| | |||||||| | |||||||||||||||||  ||| ||| | ||||||||   ||||||||||||||| | | |||||    
T  10108634 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaatttgctaatattacagggacgaa 10108733  T
Q  137 aagag 141  Q
    |||||    
T  10108734 aagag 10108738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 10171406 - 10171454
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||| |||||||| ||||||||||||||||| | |||||||||||||    
T  10171406 gagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaat 10171454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 26532898 - 26532846
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||| ||| | |||||||| | |||||||||||||||||    
T  26532898 gagggatcaaaagtggaaaaatttgaaattacagggacaaaatctaaatcttt 26532846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 14767621 - 14767570
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||| ||||| |||||||| | |||||||||||||||||    
T  14767621 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttt 14767570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 14820558 - 14820609
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  14820558 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 14820609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 26136948 - 26136994
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    |||||| ||||||||||||||||| |||||||| | |||||||||||    
T  26136948 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 42113105 - 42113047
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| |||||| |||||||| |||||||| |||||||| | ||| |||||||||||||    
T  42113105 tgaaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaatcttt 42113047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 42113239 - 42113277
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaatta 68  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  42113239 gatgaaaggagggatcaaaagtggaagaatttgaaatta 42113277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 43481473 - 43481506
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaa 71  Q
    ||||||||||||||||| ||||||||||||||||    
T  43481473 gagggatcaaaagtggaggaatctaaaattacaa 43481506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 5554992 - 5554932
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||| ||||| ||||||||||||||| | |||||| | | ||||||||| |||||||    
T  5554992 gatgaaagaagggaccaaaagtggaagaatatgaaattatagggacaaaatctgaatcttt 5554932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 19251593 - 19251481
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    |||||||||||||| ||||||||||||||| | |||||||| | |||||||||||||||||  ||||||  |||||||||  ||||| |||||||||| |    
T  19251593 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccgaaattcgctaatattaca 19251494  T
Q  129 tgtacgaaaagag 141  Q
     | ||||||||||    
T  19251493 gggacgaaaagag 19251481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 15106190 - 15106130
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||    
T  15106190 gatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaatctaaatcttt 15106130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 13254620 - 13254522
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    |||||||||||| | |||||||| |||||||| |||||||||| |||||||||||||| |||| ||||||  || |||||| |||||| ||||||||||    
T  13254620 gatgaaaggaggaaccaaaagtgaaagaatctgaaattacaaggacaaaatctaaatcttttattttacagggagtaaaaccaaaattcgctaatatta 13254522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 17850841 - 17850954
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattat 127  Q
    ||||||| |||||| ||||||||||||||||| |||||||| | |||||||||||| | ||| |||||||  |||||||||  ||||| ||||||||||     
T  17850841 gatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaagcattttatttacagtgactaaaaccgaaattcgctaatattac 17850940  T
Q  128 atgtacgaaaagag 141  Q
    | | ||||||||||    
T  17850941 agggacgaaaagag 17850954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 26135940 - 26135880
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||| ||||||||| |||||||| | |||||||||||||||||    
T  26135940 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttt 26135880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 26236358 - 26236462
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaa-gactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| ||||| ||||||||||| |||||||| | |||||||||||||||||  ||| ||| |||||||||  ||||| |||||||||| | | |||||    
T  26236358 gagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttccaaggactaaaaccgaaattcgctaatattacagggacgaa 26236457  T
Q  137 aagag 141  Q
    |||||    
T  26236458 aagag 26236462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 26236250 - 26236136
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatt-taca-agactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| |||||||| |||||||| |||||||| | ||||||| |||||||||  || ||||  ||||||||| | |||| ||||||||||     
T  26236250 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaaaatataaatctttttttatacagggactaaaaccagaattcgctaatattac 26236151  T
Q  128 atgtacgaaaagaga 142  Q
    | | |||||||||||    
T  26236150 aaggacgaaaagaga 26236136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 23806075 - 23806022
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatcta 83  Q
    |||||||||||||| |||||||||||||||||||||||||| |  |||||||||    
T  23806075 gatgaaaggagggaccaaaagtggaagaatctaaaattacaggggcaaaatcta 23806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 15106330 - 15106378
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||    
T  15106330 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat 15106378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 17850701 - 17850649
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||||||||| ||||||||   |||||||||||||||||    
T  17850701 gagggatcaaaagtggaagaatcttaaattacagagacaaaatctaaatcttt 17850649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 22263446 - 22263506
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||| | |||||||| | ||||||||| |||||||    
T  22263446 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctgaatcttt 22263506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 23854921 - 23854977
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||||||||||| ||||||||||||||| ||||||||||   |||||||||||||    
T  23854921 gatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatctaaat 23854977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 34548696 - 34548585
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    ||||||||||| || |||| |||||| ||| | |||||||| | |||||||||||||||||  ||||||  ||||||||| ||||||  ||||||||| |    
T  34548696 gatgaaaggagtgaccaaaggtggaacaatatgaaattacatggacaaaatctaaatcttttttttacagggactaaaaccaaaattcactaatattaca 34548597  T
Q  129 tgtacgaaaaga 140  Q
     | |||||||||    
T  34548596 gggacgaaaaga 34548585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 141
Target Start/End: Original strand, 26136084 - 26136185
Alignment:
Q  42 gatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc--tttaatttacaagactaaaactaaaatttgctaatattatatgtacgaaaag 139  Q
    |||||||||||||||||| | |||||||||  ||||||||||||||  |||  |||||| |||||||||  ||||| | |||||||| | | ||||||||    
T  26136084 gatcaaaagtggaagaatatgaaattacaatgacaaaatctaaatcttttttttttacaggactaaaaccgaaattcgttaatattacaaggacgaaaag 26136183  T
Q  140 ag 141  Q
    ||    
T  26136184 ag 26136185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 17463354 - 17463406
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||||||||||| |  ||||||| | |||||||||||||||||    
T  17463354 gagggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatcttt 17463406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 23806215 - 23806267
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  23806215 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 23806267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 17463214 - 17463103
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    ||||||| |||||| ||||||||| |||| || |||||||| | ||||||||||| | |||  ||||||  |||||||||   |||| ||||||||||||    
T  17463214 gatgaaatgagggaccaaaagtgggagaacctgaaattacagggacaaaatctaatttttttttttacagcgactaaaaccggaattcgctaatattata 17463115  T
Q  129 tgtacgaaaaga 140  Q
     | |||||||||    
T  17463114 gggacgaaaaga 17463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 20498864 - 20498737
Alignment:
Q  34 aaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgta 132  Q
    |||||||||| ||||||||||||||||| ||| |||| | ||| ||||||||| |||  ||||||  |||||||||   |||| |||||||||| ||  |    
T  20498864 aaaggagggaccaaaagtggaagaatctgaaa-tacagggacataatctaaatattttttttacagggactaaaaccgtaattcgctaatattacataga 20498766  T
Q  133 cgaaaagagaggtatttatccaaaaatttat 163  Q
    |||||  ||||||||||| || |||||||||    
T  20498765 cgaaa--agaggtatttaccctaaaatttat 20498737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 22263305 - 22263254
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||| | |||||||| | |||||||||||||||||    
T  22263305 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 22263254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 26560668 - 26560617
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||||| |||||||| | || ||||||||||||||    
T  26560668 agggaccaaaagtggaagaatctgaaattacagggactaaatctaaatcttt 26560617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 42670974 - 42671069
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat-ctttaatttaca-agactaaaactaaaatttgctaata 123  Q
    |||||||||||||| ||||||||||| ||| | |||||||| | ||| ||||||||| ||||  ||||||  |||||||||| ||||| |||||||    
T  42670974 gatgaaaggagggaccaaaagtggaaaaatatgaaattacagggacataatctaaatccttttttttacagggactaaaactgaaattcgctaata 42671069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 19251727 - 19251785
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| |||||| | ||||||||||||| | |||||||||| ||| |||||||||||||    
T  19251727 tgaaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatcttt 19251785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 20499002 - 20499060
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| || ||| |||||||| |||||||| |||||||| | |||||||||||||||||    
T  20499002 tgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatcttt 20499060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 23854796 - 23854698
Alignment:
Q  45 caaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaaaagag 141  Q
    ||||||||||||||| | |||||||| | |||||||||||||| |||  ||||||  |||||||||  ||||| |||||||||| | | ||||||||||    
T  23854796 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaagag 23854698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 21482151 - 21482232
Alignment:
Q  46 aaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttacaa-gactaaaactaaaatttgctaatatta 126  Q
    ||||||||||||||||||||| ||| | ||||||||||||   ||  ||||||| ||||||||||  |||| ||||||||||    
T  21482151 aaaagtggaagaatctaaaatgacagggacaaaatctaaactatttttttacaaggactaaaactggaattcgctaatatta 21482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 42670833 - 42670788
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    ||||| ||||||||||||||| | |||||||||| |||||||||||    
T  42670833 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 42670788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 39878225 - 39878185
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattaca 70  Q
    ||||||||||| || ||||||||||||||||| ||||||||    
T  39878225 gatgaaaggagtgaccaaaagtggaagaatctgaaattaca 39878185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 24467751 - 24467640
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||||  ||||||  |||||||| |  |||| |||||||||| |    
T  24467751 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaattggaattcgctaatattaca 24467652  T
Q  129 tgtacgaaaaga 140  Q
     | |||||||||    
T  24467651 gggacgaaaaga 24467640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 4907217 - 4907315
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    |||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||| |||| ||||||  ||||||||||  |||| ||||||||||    
T  4907217 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacagggactaaaactggaattcgctaatatta 4907315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 39826165 - 39826060
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt-acaag-actaaaactaaaatttgctaatattatatgtacga 135  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||||||  ||| ||| | |||||||   ||||| |||||||||||||| ||||    
T  39826165 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcgaaattcgctaatattatatggacga 39826066  T
Q  136 aaagag 141  Q
    ||||||    
T  39826065 aaagag 39826060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 52058263 - 52058376
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatt-tacaag-actaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||||||||| |||||||| | ||| |||||||||||||  || |||| | |||||||| |||||| ||||||||||     
T  52058263 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatctttttttctacaggaactaaaaccaaaattcgctaatattac 52058362  T
Q  128 atgtacgaaaagag 141  Q
    | | ||||||||||    
T  52058363 agggacgaaaagag 52058376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 18462408 - 18462296
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    |||||||||||||| ||||| ||||||||||| |||||||| | |||||||||||||||||  ||||||  |||||||||   |||| |||||||||| |    
T  18462408 gatgaaaggagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattaca 18462309  T
Q  129 tgtacgaaaagag 141  Q
     | ||||||||||    
T  18462308 gggacgaaaagag 18462296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 39826316 - 39826429
Alignment:
Q  45 caaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaaaagaga 142  Q
    ||||||||||||||||| |||||||| | |||||||||||||| ||| |||||||  |||||||||  ||||| |||||||||| ||| ||||||  |||    
T  39826316 caaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacatggacgaaa--aga 39826413  T
Q  143 ggtatttatccaaaaa 158  Q
    |||||||| |||||||    
T  39826414 ggtatttacccaaaaa 39826429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 30299494 - 30299584
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaag-actaaaactaaaatttgctaatatta 126  Q
    |||||| |||||||||||||||||||||||||| | |||||||||||||| |||  |||||| | ||||||||  ||||||||||||||||    
T  30299494 gagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttacaggaactaaaaccgaaatttgctaatatta 30299584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 48072084 - 48071970
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaat-ttacaag-actaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||| ||| | |||||||| | |||||||||||||||||  | ||||| | |||||||| | |||| ||||||||||     
T  48072084 gatgaaaggagggagcaaaagtggaataatatgaaattacagggacaaaatctaaatcttttttattacaggaactaaaaccagaattcgctaatattac 48071985  T
Q  128 atgtacgaaaagaga 142  Q
    ||| |||||||||||    
T  48071984 atgaacgaaaagaga 48071970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 39711191 - 39711098
Alignment:
Q  34 aaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    |||||||||| ||||||||||||||| | |||||||||| |||||||||||||||||  ||||||  |||||||||   |||| ||||||||||    
T  39711191 aaaggagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatatta 39711098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 17606431 - 17606371
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||| |||||| ||||||||||||||| | |||||||| |||||||||||||||||||    
T  17606431 gatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatcttt 17606371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 20995932 - 20996020
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    ||||| ||||||||||||||| | ||||||||   |||||||||||||||||  ||||||  |||||||||||||||| ||||||||||    
T  20995932 agggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatcttttttttacatggactaaaactaaaattcgctaatatta 20996020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 29696687 - 29696575
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattata 128  Q
    ||||||||||| ||  |||||||||||||| | |||||||  | |||||||||||||||||  |||||| ||||||||||  ||||| |||||||||| |    
T  29696687 gatgaaaggagtgacaaaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttacagagactaaaaccgaaattcgctaatattaca 29696588  T
Q  129 tgtacgaaaagag 141  Q
     | ||||||||||    
T  29696587 gggacgaaaagag 29696575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 39970900 - 39970960
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||| ||||| |||||||||||| ||||||||||||| | |||||||||||||||||    
T  39970900 gatgaaagaagggaccaaaagtggaaggatctaaaattacagggacaaaatctaaatcttt 39970960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 17606572 - 17606623
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatcttt 17606623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 24467884 - 24467942
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| |||||| ||||||||||||||||| |||||||| | |||||||||||||||||    
T  24467884 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 24467942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 43539470 - 43539356
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttacaa-gactaaaactaaaatttgctaatattat 127  Q
    |||||||||||||| ||||||||||| ||| |||||||||| | |||||||||||||| |||  ||||||| ||||||||    ||||||||||| |||     
T  43539470 gatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaatctaaatcgttttttttacaaggactaaaatcggaatttgctaatcttac 43539371  T
Q  128 atgtacgaaaagaga 142  Q
    ||| | |||||||||    
T  43539370 atggatgaaaagaga 43539356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 13229855 - 13229803
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatct 82  Q
    ||||||||||| |||||||||||||||||| | |||||||||| |||||||||    
T  13229855 gatgaaaggagtgatcaaaagtggaagaatatgaaattacaagcacaaaatct 13229803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 30299354 - 30299294
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||| || ||||||||||||||| | |||||||| | |||||||||||||||||    
T  30299354 gatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 30299294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 8293070 - 8293176
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc--tttaatttaca-agactaaaactaaaatttgctaatattatatgtacg 134  Q
    |||||| ||||||||||||||| | |||||||| | ||||||||||||||  |||  ||||||  ||||||||||| |||| | |||||||||| | |||    
T  8293070 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaactagaattcgttaatattatagggacg 8293169  T
Q  135 aaaagag 141  Q
    |||||||    
T  8293170 aaaagag 8293176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 4907077 - 4906972
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattatatgtacga 135  Q
    |||||| ||||||||||||||| | |||||||| | |||||||||||||| |||  ||||||  ||||||||||| ||||  ||||||||| | | ||||    
T  4907077 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaactagaattcactaatattacagggacga 4906978  T
Q  136 aaagag 141  Q
    ||||||    
T  4906977 aaagag 4906972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 18462541 - 18462637
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatt-tacaag-actaaaactaaaatttgctaatatta 126  Q
    ||||| ||| || ||||||||||||||||| |||||||  | |||||||||||||||||  || |||||| ||||||||   |||||||||||||||    
T  18462541 tgaaatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaaatctttttttatacaagaactaaaaccggaatttgctaatatta 18462637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 29696821 - 29696925
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| ||||||||||||||||| |||||||| | ||||||||||| | |||  ||||||  |||||||||   |||| |||||||||| ||  |||||    
T  29696821 gagggaccaaaagtggaagaatctgaaattacatggacaaaatctaatttttttttttacagtgactaaaaccggaattcgctaatattacataaacgaa 29696920  T
Q  137 aagag 141  Q
    |||||    
T  29696921 aagag 29696925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 30252161 - 30252253
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttta-atttaca-agactaaaactaaaatttgctaatattata 128  Q
    |||||||||||| ||||||||| | |||||||  | ||||||||||||||||||  ||||||  ||||||||| | |||| ||||||||||||    
T  30252161 gagggatcaaaaatggaagaatatgaaattacggggacaaaatctaaatctttatttttacagggactaaaaccagaattcgctaatattata 30252253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 34749364 - 34749420
Alignment:
Q  34 aaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||| | ||||||||||||||||| |||||||| | | |||||||||||||||    
T  34749364 aaaggaggtaccaaaagtggaagaatctgaaattacagggataaaatctaaatcttt 34749420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 39970761 - 39970709
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||||| ||||||||   |||||||||||||||||    
T  39970761 gagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaatcttt 39970709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 33628949 - 33628996
Alignment:
Q  34 aaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatc 81  Q
    |||||||||| ||||||||||||||||| |||||||| | ||||||||    
T  33628949 aaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatc 33628996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 52058132 - 52058074
Alignment:
Q  32 tgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||| |||||| ||||||||||||||||| |||||||| | ||| | |||||||||||    
T  52058132 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaatcttt 52058074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 8292927 - 8292862
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaattt 95  Q
    ||||||| |||| | ||||||||||||||| | ||||| || | ||||||||||||||||| ||||    
T  8292927 gatgaaaagaggaaccaaaagtggaagaatatgaaatttcagggacaaaatctaaatcttttattt 8292862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 16294211 - 16294300
Alignment:
Q  39 agggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaa-tctttaatttaca-agactaaaactaaaatttgctaatatta 126  Q
    ||||| |||||||||| |||| | |||||||||| |||||||||||| | |||| ||||||  ||||||||   ||||||||||||||||    
T  16294211 agggaccaaaagtggaggaatatgaaattacaaggacaaaatctaaattttttattttacagggactaaaatcgaaatttgctaatatta 16294300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 39711335 - 39711440
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatc-tttaatttaca-agactaaaactaaaatttgctaatattatatgtacga 135  Q
    |||||| ||||||||||||||| | |||||||  | |||||||||||||| |||  ||||||  ||||||||| | |||| |||||||||| | | ||||    
T  39711335 gagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatattacagggacga 39711434  T
Q  136 aaagag 141  Q
    ||||||    
T  39711435 aaagag 39711440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 33628805 - 33628753
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| |||||||| |||||||| |||||||  | |||||||||||||||||    
T  33628805 gagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaaatcttt 33628753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 34749252 - 34749200
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| ||||||||||||||| | |||||||  | |||||||||||||||||    
T  34749252 gagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatcttt 34749200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 1533 - 1473
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||||||| ||||||||||||||||| |||||||| | ||| |||||||||||||    
T  1533 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttt 1473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 1673 - 1719
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaa 84  Q
    |||||| ||||||||||||||||| |||||||||| ||| |||||||    
T  1673 gagggaccaaaagtggaagaatctgaaattacaaggacataatctaa 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 8585 - 8637
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| |||||||||||||||||||||||||| | |||||||||||||||||    
T  8585 gagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatcttt 8637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 12237 - 12297
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||||||| ||| ||||||||||||||||| |||||||| | |||||||||||||||||    
T  12237 gatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 4826 - 4930
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttaca-agactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| ||||||||||||||| | |||||||||| ||||||||||||||||   ||||||  || ||||||   ||||||||||||||| | | |||||    
T  4826 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttatttttacagggattaaaaccggaatttgctaatattacagggacgaa 4925  T
Q  137 aagag 141  Q
    |||||    
T  4926 aagag 4930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 5011 - 5113
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatctttaatttac-aagactaaaactaaaatttgctaatattatatgtacgaa 136  Q
    |||||| |||||||||||||||||||||||||| | || |||||||||| |||  ||||| | ||| |||||   |||| |||||||||| ||| |||||    
T  5011 gagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatattttttttactaggacaaaaaccggaattcgctaatattacatggacgaa 5110  T
Q  137 aag 139  Q
    |||    
T  5111 aag 5113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 7454 - 7514
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    ||||||||||  || ||||||| ||||||||| |||||||| | |||||||||||||||||    
T  7454 gatgaaaggatagaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttt 7514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 7341 - 7289
Alignment:
Q  38 gagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaatcttt 90  Q
    |||||| | ||||||||||||| | |||||||| | |||||||||||||||||    
T  7341 gagggaccgaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 7289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 4124 - 4180
Alignment:
Q  30 gatgaaaggagggatcaaaagtggaagaatctaaaattacaagaacaaaatctaaat 86  Q
    |||||||||||||| ||||| || |||||||| ||||||||| |||| |||||||||    
T  4124 gatgaaaggagggaccaaaaatgaaagaatctgaaattacaacaacataatctaaat 4180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 5416 times since January 2019
Visitors: 4850