View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0736_low_28 (Length: 232)
Name: NF0736_low_28
Description: NF0736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0736_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 13591635 - 13591518
Alignment:
| Q |
30 |
caagttgatcatcactaagacactcttcactccaattactcattctaatctcttctctaagctccactttcaatccaaggcttttataaataatctcttc |
129 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13591635 |
caagttgatcatcactaagacactcttcactccaattactcattctaatctcttctctaagctccactttcaatccaaggcttttataaataatctcttc |
13591536 |
T |
|
| Q |
130 |
cactgaatcatgatcgta |
147 |
Q |
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|||||||||||||||||| |
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| T |
13591535 |
cactgaatcatgatcgta |
13591518 |
T |
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