View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0737D-Insertion-10 (Length: 720)

Name: NF0737D-Insertion-10
Description: NF0737D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0737D-Insertion-10
NF0737D-Insertion-10
[»] chr2 (54 HSPs)
chr2 (224-720)||(18800549-18801036)
chr2 (36-233)||(18801361-18801559)
chr2 (454-705)||(6264407-6264658)
chr2 (555-705)||(42064358-42064508)
chr2 (552-705)||(13910306-13910459)
chr2 (559-705)||(40032320-40032466)
chr2 (555-698)||(27104642-27104785)
chr2 (555-705)||(19504607-19504757)
chr2 (555-705)||(22407671-22407821)
chr2 (586-705)||(24162474-24162593)
chr2 (500-705)||(43623830-43624034)
chr2 (560-705)||(6259077-6259222)
chr2 (555-705)||(21520955-21521107)
chr2 (555-705)||(19502273-19502423)
chr2 (563-705)||(22287598-22287740)
chr2 (628-720)||(37963174-37963266)
chr2 (564-668)||(35107152-35107256)
chr2 (608-705)||(42452678-42452776)
chr2 (630-720)||(22874060-22874150)
chr2 (630-700)||(45280252-45280322)
chr2 (632-705)||(22163209-22163282)
chr2 (632-705)||(31733027-31733100)
chr2 (606-693)||(12342684-12342771)
chr2 (635-705)||(3022086-3022156)
chr2 (596-662)||(28462591-28462657)
chr2 (632-705)||(17849037-17849110)
chr2 (632-705)||(19007560-19007633)
chr2 (609-705)||(28196534-28196630)
chr2 (607-700)||(11578371-11578465)
chr2 (632-705)||(11739822-11739895)
chr2 (608-705)||(23452499-23452601)
chr2 (629-700)||(42923776-42923849)
chr2 (633-705)||(38020064-38020136)
chr2 (633-700)||(15539742-15539809)
chr2 (632-698)||(14837193-14837259)
chr2 (640-705)||(34979841-34979906)
chr2 (605-662)||(35028472-35028529)
chr2 (579-660)||(45156918-45156999)
chr2 (605-668)||(40699202-40699266)
chr2 (630-705)||(5377691-5377770)
chr2 (452-558)||(6259245-6259351)
chr2 (448-534)||(40032501-40032587)
chr2 (608-680)||(35215883-35215956)
chr2 (606-675)||(36559067-36559136)
chr2 (606-675)||(36561344-36561413)
chr2 (579-658)||(33603791-33603870)
chr2 (583-662)||(37171049-37171128)
chr2 (631-675)||(45332384-45332428)
chr2 (449-488)||(35107018-35107057)
chr2 (628-662)||(17897547-17897581)
chr2 (447-553)||(21521130-21521236)
chr2 (609-705)||(17848342-17848436)
chr2 (449-534)||(22407863-22407948)
chr2 (672-705)||(38020162-38020195)
[»] chr7 (72 HSPs)
chr7 (555-720)||(22392350-22392515)
chr7 (449-705)||(1049557-1049813)
chr7 (555-705)||(27306491-27306641)
chr7 (585-698)||(35536-35649)
chr7 (555-705)||(44441-44591)
chr7 (500-705)||(26804396-26804596)
chr7 (555-705)||(25542407-25542557)
chr7 (547-705)||(40837004-40837163)
chr7 (560-705)||(18567495-18567640)
chr7 (560-705)||(31435309-31435454)
chr7 (555-705)||(3878449-3878604)
chr7 (583-700)||(7188447-7188565)
chr7 (578-658)||(45366446-45366526)
chr7 (616-705)||(22251804-22251893)
chr7 (629-700)||(42331266-42331337)
chr7 (608-705)||(31156173-31156271)
chr7 (633-720)||(24465503-24465591)
chr7 (633-700)||(37412395-37412462)
chr7 (632-705)||(44724533-44724606)
chr7 (609-705)||(11355189-11355285)
chr7 (581-699)||(20091808-20091928)
chr7 (609-705)||(20137371-20137467)
chr7 (633-700)||(3677235-3677301)
chr7 (629-700)||(13099743-13099814)
chr7 (633-700)||(21990106-21990172)
chr7 (608-705)||(3035646-3035748)
chr7 (632-705)||(21679981-21680054)
chr7 (628-705)||(22828895-22828972)
chr7 (608-705)||(38393911-38394013)
chr7 (634-705)||(7470284-7470359)
chr7 (632-700)||(4296202-4296271)
chr7 (628-704)||(6332176-6332252)
chr7 (634-700)||(7472247-7472317)
chr7 (608-705)||(18345466-18345568)
chr7 (632-705)||(21678020-21678093)
chr7 (640-705)||(24258425-24258490)
chr7 (640-705)||(24748556-24748621)
chr7 (608-696)||(11757153-11757246)
chr7 (632-700)||(39146254-39146322)
chr7 (629-700)||(443546-443617)
chr7 (640-700)||(7094689-7094753)
chr7 (629-696)||(20299405-20299476)
chr7 (628-690)||(30906327-30906389)
chr7 (630-705)||(48457601-48457680)
chr7 (608-680)||(1606399-1606472)
chr7 (634-700)||(7092442-7092512)
chr7 (608-705)||(7349535-7349639)
chr7 (608-705)||(7351914-7352018)
chr7 (640-700)||(24817616-24817676)
chr7 (608-705)||(28485491-28485593)
chr7 (640-705)||(20625996-20626065)
chr7 (640-705)||(20629887-20629956)
chr7 (640-705)||(20642306-20642375)
chr7 (632-700)||(9680768-9680841)
chr7 (653-700)||(21592410-21592457)
chr7 (629-705)||(28487500-28487580)
chr7 (583-658)||(42006471-42006545)
chr7 (629-700)||(20297309-20297384)
chr7 (606-675)||(9027396-9027465)
chr7 (632-693)||(25276095-25276156)
chr7 (632-700)||(42223110-42223179)
chr7 (608-680)||(43253811-43253884)
chr7 (633-695)||(9679009-9679076)
chr7 (608-661)||(38396215-38396269)
chr7 (444-525)||(35374-35455)
chr7 (608-680)||(1849894-1849967)
chr7 (672-705)||(1849975-1850008)
chr7 (606-675)||(22108089-22108158)
chr7 (606-675)||(22137100-22137169)
chr7 (447-488)||(22392290-22392331)
chr7 (606-675)||(40549849-40549918)
chr7 (606-675)||(40552127-40552196)
[»] chr3 (97 HSPs)
chr3 (449-705)||(11162891-11163147)
chr3 (449-695)||(48361940-48362186)
chr3 (555-705)||(5522875-5523025)
chr3 (555-705)||(22114565-22114715)
chr3 (447-705)||(11170143-11170401)
chr3 (555-705)||(1321288-1321438)
chr3 (555-705)||(26720395-26720545)
chr3 (555-705)||(3859375-3859525)
chr3 (555-705)||(5191500-5191650)
chr3 (449-690)||(24176999-24177261)
chr3 (532-705)||(18162488-18162660)
chr3 (606-700)||(15780758-15780852)
chr3 (555-700)||(18099435-18099580)
chr3 (583-705)||(12268226-12268348)
chr3 (555-700)||(10956292-10956437)
chr3 (444-698)||(32218831-32219085)
chr3 (555-705)||(10084649-10084803)
chr3 (555-700)||(10958588-10958733)
chr3 (576-700)||(18097165-18097290)
chr3 (555-705)||(32264299-32264453)
chr3 (578-705)||(45882809-45882936)
chr3 (555-705)||(24979554-24979704)
chr3 (555-705)||(10191569-10191723)
chr3 (301-438)||(20383343-20383480)
chr3 (547-700)||(35777261-35777413)
chr3 (630-705)||(4308541-4308616)
chr3 (630-705)||(43226008-43226083)
chr3 (575-662)||(46966938-46967025)
chr3 (606-705)||(6063706-6063807)
chr3 (640-705)||(6561742-6561807)
chr3 (606-705)||(6066056-6066156)
chr3 (609-705)||(28761688-28761784)
chr3 (606-705)||(38889937-38890037)
chr3 (629-705)||(51943292-51943368)
chr3 (581-660)||(13893267-13893345)
chr3 (630-705)||(43228213-43228288)
chr3 (630-705)||(51727266-51727341)
chr3 (628-703)||(53597161-53597235)
chr3 (629-700)||(53915761-53915832)
chr3 (629-695)||(1313331-1313397)
chr3 (583-700)||(23633334-23633452)
chr3 (606-700)||(50493897-50493991)
chr3 (632-705)||(1626943-1627016)
chr3 (630-705)||(35918209-35918284)
chr3 (608-705)||(4104155-4104257)
chr3 (633-710)||(27635882-27635959)
chr3 (632-705)||(28137555-28137628)
chr3 (632-705)||(47701855-47701928)
chr3 (608-705)||(455802-455904)
chr3 (608-705)||(458179-458281)
chr3 (633-705)||(51675015-51675087)
chr3 (633-700)||(3306724-3306791)
chr3 (629-700)||(53917929-53918000)
chr3 (606-680)||(6719396-6719470)
chr3 (632-705)||(3314608-3314681)
chr3 (628-705)||(4560525-4560602)
chr3 (632-705)||(43423723-43423796)
chr3 (608-700)||(746650-746749)
chr3 (632-700)||(880717-880785)
chr3 (632-700)||(5927029-5927097)
chr3 (632-700)||(28100306-28100374)
chr3 (633-705)||(43421675-43421747)
chr3 (632-700)||(53468720-53468788)
chr3 (606-686)||(53896475-53896555)
chr3 (630-696)||(6484307-6484373)
chr3 (583-700)||(23636901-23637019)
chr3 (632-690)||(28180948-28181006)
chr3 (632-700)||(31151271-31151341)
chr3 (606-663)||(5886183-5886240)
chr3 (606-663)||(5899658-5899715)
chr3 (628-720)||(13420419-13420509)
chr3 (632-705)||(28102262-28102335)
chr3 (632-705)||(36011751-36011824)
chr3 (632-705)||(53591119-53591192)
chr3 (632-700)||(890036-890104)
chr3 (633-705)||(6231374-6231446)
chr3 (547-627)||(38889856-38889936)
chr3 (606-661)||(25388796-25388851)
chr3 (629-705)||(25533355-25533439)
chr3 (606-700)||(38210266-38210362)
chr3 (629-705)||(42992203-42992283)
chr3 (606-700)||(1618920-1619018)
chr3 (630-700)||(39715392-39715461)
chr3 (608-680)||(10621827-10621900)
chr3 (268-313)||(45748199-45748244)
chr3 (632-705)||(47149155-47149233)
chr3 (547-627)||(6719471-6719551)
chr3 (676-720)||(25633899-25633943)
chr3 (606-662)||(26762863-26762919)
chr3 (153-208)||(54016342-54016397)
chr3 (663-713)||(17795225-17795275)
chr3 (663-713)||(19103665-19103715)
chr3 (672-705)||(30005805-30005838)
chr3 (608-680)||(41849041-41849114)
chr3 (608-660)||(42990181-42990234)
chr3 (672-705)||(42990268-42990301)
chr3 (632-705)||(54691834-54691906)
[»] chr8 (46 HSPs)
chr8 (449-705)||(4423835-4424091)
chr8 (555-720)||(2468345-2468510)
chr8 (555-705)||(27826909-27827059)
chr8 (555-705)||(27829220-27829370)
chr8 (555-700)||(28251834-28251978)
chr8 (562-705)||(15072640-15072783)
chr8 (555-705)||(14807675-14807824)
chr8 (547-705)||(3886180-3886341)
chr8 (555-705)||(15067904-15068054)
chr8 (555-705)||(12517286-12517438)
chr8 (606-705)||(18810682-18810781)
chr8 (606-705)||(18812867-18812966)
chr8 (606-705)||(44720817-44720916)
chr8 (606-720)||(21482297-21482410)
chr8 (609-705)||(13858746-13858842)
chr8 (609-705)||(14419453-14419549)
chr8 (629-696)||(181534-181601)
chr8 (632-705)||(33541650-33541723)
chr8 (632-705)||(35872640-35872713)
chr8 (630-705)||(1225164-1225239)
chr8 (630-705)||(26775199-26775274)
chr8 (629-700)||(41382670-41382741)
chr8 (585-686)||(31162165-31162267)
chr8 (629-700)||(43530121-43530196)
chr8 (581-705)||(15185972-15186097)
chr8 (632-705)||(27107159-27107232)
chr8 (608-705)||(32339280-32339382)
chr8 (609-705)||(5623000-5623096)
chr8 (606-662)||(17847502-17847558)
chr8 (628-700)||(27911011-27911083)
chr8 (628-700)||(27957430-27957502)
chr8 (632-705)||(14477276-14477349)
chr8 (608-705)||(15809190-15809292)
chr8 (608-705)||(24873443-24873547)
chr8 (632-705)||(25952521-25952594)
chr8 (633-705)||(36865538-36865611)
chr8 (660-720)||(21480542-21480602)
chr8 (608-700)||(28283486-28283585)
chr8 (629-700)||(41384742-41384812)
chr8 (608-705)||(3873981-3874083)
chr8 (632-705)||(30480765-30480838)
chr8 (628-668)||(6375985-6376025)
chr8 (606-675)||(31035042-31035111)
chr8 (632-705)||(5372440-5372512)
chr8 (630-680)||(22684953-22685003)
chr8 (663-705)||(37214472-37214514)
[»] chr6 (46 HSPs)
chr6 (449-705)||(32279794-32280048)
chr6 (449-705)||(1072139-1072395)
chr6 (555-705)||(14507437-14507587)
chr6 (555-693)||(11983303-11983441)
chr6 (555-697)||(30729098-30729240)
chr6 (586-705)||(15532943-15533062)
chr6 (583-705)||(8995410-8995531)
chr6 (583-705)||(9019857-9019978)
chr6 (586-696)||(15530393-15530503)
chr6 (555-705)||(15541402-15541552)
chr6 (555-705)||(19227670-19227821)
chr6 (583-720)||(15346320-15346458)
chr6 (608-700)||(12195782-12195875)
chr6 (630-705)||(28241583-28241658)
chr6 (629-700)||(17852518-17852589)
chr6 (632-705)||(13057173-13057246)
chr6 (640-705)||(14459027-14459092)
chr6 (632-705)||(24338710-24338783)
chr6 (632-705)||(32447578-32447651)
chr6 (606-705)||(20915618-20915719)
chr6 (628-705)||(3390354-3390431)
chr6 (632-705)||(25477253-25477326)
chr6 (630-705)||(1230511-1230586)
chr6 (605-700)||(12186334-12186432)
chr6 (672-720)||(15719673-15719721)
chr6 (634-705)||(3632200-3632271)
chr6 (632-699)||(22490618-22490685)
chr6 (606-680)||(4816532-4816606)
chr6 (554-632)||(24191533-24191611)
chr6 (632-705)||(3233993-3234065)
chr6 (632-705)||(13039733-13039806)
chr6 (608-705)||(30034865-30034967)
chr6 (608-705)||(30967152-30967253)
chr6 (628-699)||(3028117-3028189)
chr6 (609-720)||(15366992-15367110)
chr6 (608-705)||(2629147-2629250)
chr6 (577-632)||(24192630-24192685)
chr6 (606-676)||(26066319-26066389)
chr6 (606-676)||(26068590-26068660)
chr6 (632-705)||(3630126-3630199)
chr6 (640-689)||(17012031-17012080)
chr6 (578-658)||(24542987-24543067)
chr6 (606-700)||(12937461-12937559)
chr6 (606-668)||(16455723-16455785)
chr6 (640-705)||(13870684-13870748)
chr6 (605-658)||(19696393-19696446)
[»] chr4 (80 HSPs)
chr4 (547-705)||(11434868-11435026)
chr4 (482-700)||(22801129-22801346)
chr4 (555-705)||(5198341-5198491)
chr4 (555-705)||(51015167-51015317)
chr4 (554-700)||(48486239-48486385)
chr4 (563-705)||(619709-619851)
chr4 (555-705)||(24888717-24888867)
chr4 (555-700)||(22803001-22803145)
chr4 (555-705)||(38409120-38409276)
chr4 (579-705)||(22044652-22044777)
chr4 (555-705)||(31849861-31850011)
chr4 (588-705)||(40091677-40091794)
chr4 (578-705)||(24878933-24879060)
chr4 (579-705)||(22046947-22047072)
chr4 (555-705)||(24880372-24880522)
chr4 (555-705)||(47274648-47274798)
chr4 (555-700)||(37089638-37089786)
chr4 (547-705)||(7941232-7941392)
chr4 (555-705)||(36919847-36919999)
chr4 (552-705)||(36921756-36921910)
chr4 (564-700)||(8756516-8756653)
chr4 (555-700)||(9174413-9174558)
chr4 (555-665)||(3824875-3824985)
chr4 (577-705)||(5637727-5637858)
chr4 (583-705)||(9148201-9148324)
chr4 (555-705)||(52942708-52942859)
chr4 (630-705)||(40637070-40637145)
chr4 (606-700)||(9176741-9176835)
chr4 (555-705)||(11006499-11006653)
chr4 (606-705)||(18847125-18847224)
chr4 (606-700)||(16934410-16934504)
chr4 (575-668)||(40999246-40999339)
chr4 (630-705)||(6764835-6764910)
chr4 (629-700)||(44600105-44600176)
chr4 (630-705)||(47868397-47868472)
chr4 (606-700)||(16932056-16932150)
chr4 (608-705)||(17662496-17662598)
chr4 (632-705)||(24446841-24446914)
chr4 (605-700)||(15032803-15032899)
chr4 (609-700)||(18537737-18537829)
chr4 (632-700)||(19095880-19095948)
chr4 (630-705)||(36378288-36378363)
chr4 (629-700)||(14787698-14787771)
chr4 (608-705)||(47211002-47211106)
chr4 (640-700)||(19322703-19322763)
chr4 (633-705)||(33415749-33415821)
chr4 (609-705)||(38928440-38928536)
chr4 (629-700)||(5100992-5101063)
chr4 (630-705)||(14633316-14633390)
chr4 (605-700)||(16186103-16186200)
chr4 (633-700)||(56030443-56030510)
chr4 (632-705)||(3937471-3937543)
chr4 (608-705)||(24348187-24348289)
chr4 (632-705)||(38270248-38270321)
chr4 (630-705)||(2485134-2485210)
chr4 (633-705)||(37313328-37313400)
chr4 (583-662)||(4569902-4569980)
chr4 (630-705)||(16453305-16453380)
chr4 (608-705)||(53405100-53405201)
chr4 (632-705)||(2891314-2891388)
chr4 (640-694)||(41997498-41997552)
chr4 (609-690)||(18535106-18535187)
chr4 (606-705)||(11008828-11008931)
chr4 (606-662)||(52043735-52043791)
chr4 (630-705)||(8631681-8631760)
chr4 (605-700)||(12102060-12102158)
chr4 (632-705)||(12396107-12396180)
chr4 (632-705)||(12401069-12401142)
chr4 (585-662)||(16638636-16638712)
chr4 (608-705)||(18709425-18709531)
chr4 (608-680)||(22132686-22132759)
chr4 (606-668)||(25357608-25357671)
chr4 (478-522)||(24334616-24334660)
chr4 (447-566)||(36920009-36920127)
chr4 (632-698)||(6132871-6132936)
chr4 (633-695)||(13543953-13544020)
chr4 (630-700)||(16455283-16455353)
chr4 (632-705)||(18409609-18409681)
chr4 (608-660)||(22134937-22134990)
chr4 (606-662)||(28453658-28453715)
[»] chr5 (69 HSPs)
chr5 (547-705)||(25921735-25921893)
chr5 (555-705)||(38881972-38882123)
chr5 (547-705)||(2174778-2174936)
chr5 (447-700)||(31466245-31466498)
chr5 (555-705)||(4236497-4236646)
chr5 (577-705)||(2818598-2818726)
chr5 (448-700)||(12556190-12556442)
chr5 (555-705)||(16776024-16776175)
chr5 (555-700)||(36402595-36402739)
chr5 (577-705)||(21947916-21948043)
chr5 (577-705)||(20507724-20507852)
chr5 (555-705)||(6756361-6756511)
chr5 (547-677)||(39797947-39798077)
chr5 (555-680)||(21684748-21684873)
chr5 (606-705)||(31542653-31542752)
chr5 (606-705)||(31544998-31545097)
chr5 (629-700)||(26098518-26098589)
chr5 (629-700)||(26097674-26097745)
chr5 (632-705)||(17072827-17072900)
chr5 (632-705)||(25904047-25904120)
chr5 (632-700)||(36208524-36208593)
chr5 (629-697)||(18596588-18596656)
chr5 (630-705)||(10529361-10529436)
chr5 (606-705)||(31179633-31179732)
chr5 (630-705)||(39854426-39854500)
chr5 (630-700)||(40221464-40221534)
chr5 (640-700)||(6661449-6661509)
chr5 (640-700)||(18511479-18511541)
chr5 (629-700)||(41585973-41586044)
chr5 (630-705)||(4409999-4410078)
chr5 (608-705)||(18466599-18466701)
chr5 (608-705)||(18468926-18469028)
chr5 (632-700)||(20044954-20045022)
chr5 (607-670)||(29748260-29748324)
chr5 (632-700)||(34530933-34531001)
chr5 (447-570)||(659711-659833)
chr5 (634-700)||(18509585-18509652)
chr5 (447-530)||(20504371-20504454)
chr5 (630-705)||(37706042-37706117)
chr5 (635-705)||(10474585-10474655)
chr5 (608-700)||(10586758-10586854)
chr5 (632-705)||(20042994-20043067)
chr5 (449-530)||(20507920-20508001)
chr5 (632-705)||(24126800-24126873)
chr5 (608-705)||(27912449-27912553)
chr5 (632-705)||(31472875-31472948)
chr5 (632-705)||(1189871-1189949)
chr5 (637-705)||(2954365-2954433)
chr5 (640-700)||(21288716-21288776)
chr5 (606-661)||(34477378-34477433)
chr5 (606-699)||(42770691-42770785)
chr5 (605-662)||(2144897-2144955)
chr5 (632-705)||(695833-695906)
chr5 (608-676)||(3373332-3373401)
chr5 (608-680)||(15552154-15552227)
chr5 (642-705)||(16092462-16092529)
chr5 (608-680)||(27910364-27910437)
chr5 (606-675)||(38960334-38960403)
chr5 (447-530)||(21947768-21947851)
chr5 (606-661)||(34479739-34479794)
chr5 (632-682)||(2723911-2723961)
chr5 (608-661)||(25803935-25803989)
chr5 (640-705)||(17818752-17818816)
chr5 (672-705)||(21684713-21684746)
chr5 (606-675)||(23665056-23665125)
chr5 (606-675)||(23793462-23793531)
chr5 (672-705)||(34477316-34477349)
chr5 (672-705)||(34479681-34479714)
chr5 (632-705)||(39398255-39398327)
[»] chr1 (84 HSPs)
chr1 (555-705)||(51749906-51750056)
chr1 (555-705)||(28207330-28207480)
chr1 (555-705)||(51752232-51752382)
chr1 (560-705)||(13761709-13761854)
chr1 (554-690)||(30790673-30790809)
chr1 (451-694)||(38925753-38925996)
chr1 (555-705)||(13214948-13215098)
chr1 (555-699)||(47451515-47451659)
chr1 (547-705)||(6822874-6823032)
chr1 (555-705)||(41646787-41646937)
chr1 (555-705)||(20302326-20302476)
chr1 (555-710)||(28840545-28840702)
chr1 (555-700)||(10400097-10400242)
chr1 (555-705)||(6823751-6823902)
chr1 (577-705)||(28842382-28842512)
chr1 (583-705)||(15823441-15823563)
chr1 (555-698)||(3579887-3580032)
chr1 (628-719)||(49495449-49495540)
chr1 (554-700)||(39462384-39462531)
chr1 (560-705)||(14098234-14098378)
chr1 (232-311)||(18190579-18190659)
chr1 (606-697)||(16231519-16231610)
chr1 (449-644)||(49687301-49687496)
chr1 (606-700)||(16226085-16226179)
chr1 (629-700)||(28998522-28998593)
chr1 (629-700)||(29004238-29004309)
chr1 (608-705)||(2510588-2510690)
chr1 (640-705)||(2617468-2617533)
chr1 (632-700)||(14183855-14183923)
chr1 (628-700)||(18800838-18800910)
chr1 (621-705)||(20291390-20291474)
chr1 (633-705)||(25251539-25251611)
chr1 (605-700)||(42922150-42922246)
chr1 (642-705)||(25248778-25248841)
chr1 (632-705)||(11457739-11457812)
chr1 (640-705)||(18307061-18307126)
chr1 (628-705)||(31423138-31423215)
chr1 (606-700)||(47177276-47177374)
chr1 (606-700)||(47179627-47179725)
chr1 (632-705)||(50079085-50079158)
chr1 (629-700)||(17324905-17324976)
chr1 (605-700)||(26613506-26613604)
chr1 (608-705)||(9459681-9459785)
chr1 (608-705)||(9463508-9463612)
chr1 (630-700)||(12302774-12302849)
chr1 (632-705)||(31489859-31489932)
chr1 (608-705)||(31735785-31735887)
chr1 (632-705)||(50248836-50248909)
chr1 (587-662)||(2401492-2401568)
chr1 (629-705)||(6995964-6996040)
chr1 (606-700)||(8347538-8347633)
chr1 (633-705)||(17318838-17318910)
chr1 (448-552)||(30790832-30790936)
chr1 (608-700)||(47906183-47906282)
chr1 (629-700)||(2949500-2949571)
chr1 (447-534)||(3580074-3580161)
chr1 (629-705)||(27337202-27337282)
chr1 (634-705)||(21948451-21948526)
chr1 (608-698)||(24325575-24325674)
chr1 (634-705)||(39932017-39932090)
chr1 (640-705)||(17186392-17186457)
chr1 (608-705)||(27339394-27339496)
chr1 (608-684)||(48665090-48665167)
chr1 (632-705)||(50076936-50077009)
chr1 (587-662)||(2393578-2393654)
chr1 (672-720)||(6115328-6115376)
chr1 (606-705)||(16428570-16428670)
chr1 (632-700)||(18839531-18839599)
chr1 (628-668)||(43104099-43104139)
chr1 (630-695)||(9241359-9241425)
chr1 (640-698)||(17324017-17324075)
chr1 (449-530)||(39462258-39462339)
chr1 (608-680)||(46432017-46432090)
chr1 (606-700)||(8349317-8349413)
chr1 (640-684)||(26520403-26520447)
chr1 (575-662)||(46782939-46783029)
chr1 (630-705)||(6756469-6756544)
chr1 (628-690)||(15669669-15669732)
chr1 (449-492)||(41646681-41646724)
chr1 (607-662)||(49958963-49959018)
chr1 (640-698)||(13125727-13125785)
chr1 (634-680)||(15295137-15295183)
chr1 (606-683)||(16431018-16431096)
chr1 (606-660)||(27916415-27916469)
[»] scaffold0339 (1 HSPs)
scaffold0339 (555-705)||(3873-4023)
[»] scaffold0250 (1 HSPs)
scaffold0250 (555-705)||(2756-2906)
[»] scaffold0131 (1 HSPs)
scaffold0131 (560-693)||(14900-15033)
[»] scaffold0025 (2 HSPs)
scaffold0025 (547-705)||(73285-73446)
scaffold0025 (560-705)||(69553-69701)
[»] scaffold0068 (1 HSPs)
scaffold0068 (555-705)||(29037-29197)
[»] scaffold0038 (1 HSPs)
scaffold0038 (630-705)||(41745-41820)
[»] scaffold0472 (1 HSPs)
scaffold0472 (606-700)||(6126-6220)
[»] scaffold0552 (1 HSPs)
scaffold0552 (630-705)||(1093-1168)
[»] scaffold0154 (1 HSPs)
scaffold0154 (629-692)||(11748-11811)
[»] scaffold0224 (1 HSPs)
scaffold0224 (605-700)||(16085-16181)
[»] scaffold0005 (2 HSPs)
scaffold0005 (629-700)||(51959-52032)
scaffold0005 (630-705)||(183902-183976)
[»] scaffold0031 (1 HSPs)
scaffold0031 (629-705)||(79135-79211)
[»] scaffold0004 (1 HSPs)
scaffold0004 (609-705)||(79789-79885)
[»] scaffold0468 (1 HSPs)
scaffold0468 (641-700)||(1898-1958)
[»] scaffold0133 (1 HSPs)
scaffold0133 (640-690)||(4775-4825)
[»] scaffold0057 (1 HSPs)
scaffold0057 (640-699)||(16914-16974)
[»] scaffold0140 (2 HSPs)
scaffold0140 (606-675)||(22137-22206)
scaffold0140 (606-675)||(24412-24481)


Alignment Details
Target: chr2 (Bit Score: 313; Significance: 1e-176; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 224 - 720
Target Start/End: Complemental strand, 18801036 - 18800549
Alignment:
Q  224 ttatgaaggtatcatgaagtgggtttccaagcttgtatgaagcagtttatgaagaagttgaatgctttcatattgtaatggaattgtgctatggggaaca 323  Q
    ||||||| ||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||| | |||||||    
T  18801036 ttatgaaagtatcatgaagtgggtttccaagcttgtatgaag------------aagttgaatgctttcatattgtaatggaattgtgctttagggaaca 18800949  T
Q  324 actgaattattcatcaagaagtgatgttaatcatcatgtattgtcatgacatga-----gaattgttcttaaagttatcaagtttgagaagttgaagatt 418  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||     |||||||||||||| ||||||||||||||||||||||||||    
T  18800948 actgaattattcatcaagaagtgatgttagtcatcatgtattgtcatgacatgacatgagaattgttcttaaaattatcaagtttgagaagttgaagatt 18800849  T
Q  419 ccaagatttgaagaggtagtcctcggttattgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattg 518  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||||    
T  18800848 ccaagatttgaa-aggtagtcctcggttattgtgagagttaacttaaaatcatgttctggagaaatcgtggcacgtttgttgggcaacgtgacacgattg 18800750  T
Q  519 gatgttttagttatgaagaaagtaactagaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaa 618  Q
    ||||||| |||||||||| |||| ||| |||||||||||| ||||||||||| | |||||| ||||||||||| ||||||| |||| |||||||||||||    
T  18800749 gatgtttcagttatgaagcaagtcactggaaaaattgtggcacgatggtgcgctagaggcg-aaaacagaaacatatttttaagtgcagatttgttccaa 18800651  T
Q  619 attttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaagcaaactagggttt 718  Q
    ||||||| |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||| ||| ||| |||||||||    
T  18800650 attttaaacgatacttttactataaatatagaccttgtatcagggtaaacatggagatatagggggctgaaacaagggtttagaaatcaagctagggttt 18800551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 36 - 233
Target Start/End: Complemental strand, 18801559 - 18801361
Alignment:
Q  36 gctcataatggagctatgtttctaacaa-gctcaaaaagaagctgaagaagaaaggggtgattgggagagaagcacaatggaagaggcgaaacggaatga 134  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18801559 gctcacaatggagctatgtttctaacaaagctcaaaaagaagctgaagaagaaaggggtgattgggagagaagcacaatggaagaggcgaaatggaatga 18801460  T
Q  135 agatcaagaaatttatcaagaaaccgattgtgaagaataaggttccgaagtttattcttgctcatatttaatttcagtattattcggttttatgaaggt 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18801459 agatcaagaaatttatcaagaaaccgattgtgaagaataaggttccgaagtttattcttgctcatatttaatttcagtattattcggttttatgaaggt 18801361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 454 - 705
Target Start/End: Complemental strand, 6264658 - 6264407
Alignment:
Q  454 gagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactagaaaaat 553  Q
    ||||||||||||||| | ||| || |||||| || ||||  | || |||||||||| || |||||||||||| |||| ||| | |||| ||| |||||||    
T  6264658 gagttaacttaaaatcaggttctgcagaaattgttgcacgatggttgggcaacgtggcatgattggatgtttcagttttgaggcaagtcactggaaaaat 6264559  T
Q  554 tgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacct 653  Q
     |||| |||||||||| || | |||||| ||||||||| |||||||  ||| |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  6264558 cgtggcacgatggtgcattagcggcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgatatttttactataaatatagacct 6264459  T
Q  654 tgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||||| ||||    
T  6264458 tgtatcagactaaactttgagatagagggggctgaaacaaaggtttagaaag 6264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 42064358 - 42064508
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42064358 gtggcacgatggtgcgctggcagcgaaaaacagaaacatattttttagtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 42064457  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  42064458 gtatcagagcaaacttggagatagagggagctgaaacaagggtttagaaag 42064508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 552 - 705
Target Start/End: Complemental strand, 13910459 - 13910306
Alignment:
Q  552 attgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagac 651  Q
    ||||||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||||||||||||||| || |||||||| ||||||||||||    
T  13910459 attgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagggaaacttttactataaatatagac 13910360  T
Q  652 cttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  13910359 cttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 13910306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 559 - 705
Target Start/End: Complemental strand, 40032466 - 40032320
Alignment:
Q  559 tacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtat 658  Q
    |||||||||||| |||  ||||| |||||||||||||||||  ||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  40032466 tacgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaagttttaagcgatacttttactataaatatagaccttgtat 40032367  T
Q  659 cagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  40032366 cagagtaaactttgagatagagggggctgaaacaagggtttagaaag 40032320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 555 - 698
Target Start/End: Original strand, 27104642 - 27104785
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  | |||||||| |||| ||||||| |||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  27104642 gtggcacgatggtgcgctggcagggaaaaacataaacatatttttgagtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 27104741  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtt 698  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  27104742 gtatcagagaaaactttgagatagagggggctgaaacaagggtt 27104785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 19504757 - 19504607
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| | |||| |||||||||  ||||||  ||| ||||||||||||||||||||| || |||||||| |||||||||||||||    
T  19504757 gtggcacgatggtgcgctggcgacgaataacagaaacacatttttaggtgcagatttgttccaaattttaagggaaacttttactataaatatagacctt 19504658  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  19504657 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 19504607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 22407821 - 22407671
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| |||||||||||||||  ||||| |||||||||||||||||  ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  22407821 gtggcacgatggtgcgttggcagcgaataacagaaacgtatttttgggtgcagatttgttcaaaattttaagcaatacttttactataaatatagacctt 22407722  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||  |||||| |||| ||||||||||||||||| ||||    
T  22407721 gtatcagagtaaactgtgagatatagggtgctgaaacaagggtttagaaag 22407671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 586 - 705
Target Start/End: Complemental strand, 24162593 - 24162474
Alignment:
Q  586 agaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggc 685  Q
    ||||||||||||||  ||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||    
T  24162593 agaaacgtatttttgggtgcagatttgtttcaaattttaagcgaaacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggc 24162494  T
Q  686 tgaaacaagggtttataaag 705  Q
    ||||||||||||||| ||||    
T  24162493 tgaaacaagggtttagaaag 24162474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 500 - 705
Target Start/End: Complemental strand, 43624034 - 43623830
Alignment:
Q  500 gggcaacgtgtcacgattggatgttttagttatgaagaaagtaactagaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtattttt 599  Q
    ||||||| || |||||||||| |||| |||| ||| | |||  |||  |||||| |||| ||||||||||| |||  || || |||| |||||||||||     
T  43624034 gggcaacatggcacgattggaggtttcagttttgaggcaaggcactgaaaaaatcgtggcacgatggtgcgctggcagcaaataacataaacgtattttg 43623935  T
Q  600 cagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttt 699  Q
      ||| |||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| |||||||| |||||    
T  43623934 g-gtgcagatttgttccaaattttaagcaatacttttactataaaaatagaccttgtatcagagtaaactgggagatagaggggggtgaaacaatggttt 43623836  T
Q  700 ataaag 705  Q
    | ||||    
T  43623835 agaaag 43623830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 560 - 705
Target Start/End: Complemental strand, 6259222 - 6259077
Alignment:
Q  560 acgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatc 659  Q
    ||||||||||| ||| || ||| ||||||||| |||||||  ||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||     
T  6259222 acgatggtgcgctggcggtgaataacagaaacatatttttgggtgcagacttgttccaaattttaagcgatacttttactataaatatagaccttgtatt 6259123  T
Q  660 agagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||| ||||||| |||||||||| || ||||||||| ||||| ||||    
T  6259122 agactaaactttgagatagaggaggatgaaacaagagtttagaaag 6259077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 21521107 - 21520955
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |||| ||||||||||||  ||| |||||||||||||| |||||||||||||||||| ||||||||| |||||    
T  21521107 gtggcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatttgttccaaaatttaagcgatacttttactataaatataaacctt 21521008  T
Q  655 gtatcagagtaaactt--ggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| |||||||   |||||||| |||||||||||||||||||| ||||    
T  21521007 gtatcagactaaactttgagagatagatggggctgaaacaagggtttagaaag 21520955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 19502423 - 19502273
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| | |||| ||||||||| |||||||   || ||||||| ||||||||||||| || | |||||| |||||||||||||||    
T  19502423 gtggcacgatggtgcgctggcgacgaataacagaaacatatttttggttgcagatttgatccaaattttaagggaaaattttactataaatatagacctt 19502324  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||| ||||    
T  19502323 gtatcagagcaaacttggagataaagggggctgaaacaagagtttagaaag 19502273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 563 - 705
Target Start/End: Complemental strand, 22287740 - 22287598
Alignment:
Q  563 atggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    |||||||| |||  ||||| |||| ||| |||| |||  ||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |    
T  22287740 atggtgcgctggcagcgaataacaaaaatgtatgtttgggtgcatatttgttccaaattttaagcgatacttttactataaatatagaccttgtattaaa 22287641  T
Q  663 gtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| |||||| |||||||||||||||||||||| ||||    
T  22287640 gtaaactttgagatatagggggctgaaacaagggtttagaaag 22287598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 628 - 720
Target Start/End: Complemental strand, 37963266 - 37963174
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    ||||||||||| |||||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  37963266 gatacttttactataaatatagactttgtataagagtaaaccttgagatagagggggctgaaacaagggtttagaaatcaaactagggtttgt 37963174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 564 - 668
Target Start/End: Original strand, 35107152 - 35107256
Alignment:
Q  564 tggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagag 663  Q
    ||||||| || ||||||| |||| || ||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||| |||||||| ||    
T  35107152 tggtgcgctgaaggcgaataacataatcgtatttttcaatgcagatttgttccaaattttaagggatacttttactataaatatagacattgtatcatag 35107251  T
Q  664 taaac 668  Q
    |||||    
T  35107252 taaac 35107256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 42452678 - 42452776
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||| | ||  |||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  42452678 atttgttccaaatttatgagttatacttttattataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 42452776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 630 - 720
Target Start/End: Original strand, 22874060 - 22874150
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    ||||||| | ||||||| || | ||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  22874060 tacttttgctataaatacaggctttgtatcagagcaaacctggagatagagggggctgaaacaagggtttagaaatcaaactagggtttgt 22874150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 630 - 700
Target Start/End: Complemental strand, 45280322 - 45280252
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||| || ||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  45280322 tactttcactataaatatataccttgtatcagagcaaactttgagatagagggggctgaaacaagggttta 45280252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 22163282 - 22163209
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| |||| ||||    
T  22163282 cttttactataaatatagacattgtatcagtgtaaactttgagatagagggggctgaaacaaggatttagaaag 22163209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 31733100 - 31733027
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||| |||||||||| | ||||||||||||||||||||||||||||| ||||    
T  31733100 cttttactataaatatagactttgtaacagagtaaacattgagatagagggggctgaaacaagggtttagaaag 31733027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 606 - 693
Target Start/End: Complemental strand, 12342771 - 12342684
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaa 693  Q
    ||||||||||||| ||||    ||||||||||| ||||||||| || |||||||||||||||| | ||||||||||||||||||||||    
T  12342771 agatttgttccaatttttttaggatacttttactataaatatacacattgtatcagagtaaaccttgagatagagggggctgaaacaa 12342684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 635 - 705
Target Start/End: Original strand, 3022086 - 3022156
Alignment:
Q  635 ttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||| |||||||||||| |||||||||||||||| | |||||| ||| |||||||||||||||||||||||    
T  3022086 ttactataaatatagactttgtatcagagtaaaccttgagatataggaggctgaaacaagggtttataaag 3022156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 596 - 662
Target Start/End: Complemental strand, 28462657 - 28462591
Alignment:
Q  596 ttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    ||||||||| ||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||    
T  28462657 ttttcagtgcagatttgttccaaattttaagggttacttttactataaatataaaccttgtatcaga 28462591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 17849037 - 17849110
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| ||||||||| || ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  17849037 cttttactataaatataaacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 17849110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 19007560 - 19007633
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||| | |||||||| ||||||| | ||||||||||||||||||||||||||||| ||||    
T  19007560 cttttactataaatataggctttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaaag 19007633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 705
Target Start/End: Original strand, 28196534 - 28196630
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||| ||||||| |||||||||  | |||||||||||||||| | |||||||||||||||||||||| |||||| ||||    
T  28196534 tttgttccaatttatgagggattcttttactataaatatatgctttgtatcagagtaaacattgagatagagggggctgaaacaaaggtttagaaag 28196630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 607 - 700
Target Start/End: Complemental strand, 11578465 - 11578371
Alignment:
Q  607 gatttgttccaaattttaagcgata-cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||| |||| || |||  ||||||| ||||||||||||||| |||||| |||||  | ||||||||| |||||||||||||||||||    
T  11578465 gatttgttccaatttttgagggattgcttttactataaatatagaccttatatcagggtaaatcttgagatagagtgggctgaaacaagggttta 11578371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 11739895 - 11739822
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||| || |||||| | |||||||||||||||| |||||||||||| ||||    
T  11739895 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctggaacaagggtttagaaag 11739822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 23452601 - 23452499
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     |||| |||||||||||||||||||||||| |    
T  23452601 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagacagagggggctgaaacaagggtttaga 23452502  T
Q  703 aag 705  Q
    |||    
T  23452501 aag 23452499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 42923849 - 42923776
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaa-cttg-gagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| |||| |||||| |||| |||||||||| ||||||||||||||||||    
T  42923849 atacttttactataaatatagaccttgaatcatagtaaaccttgagagatagaggaggctgaaacaagggttta 42923776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 633 - 705
Target Start/End: Original strand, 38020064 - 38020136
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| |||||||||||| ||||||| | |||||| ||||||||||||||| || |||||||||||| ||||    
T  38020064 ttttactataaatatagacattgtatcggtgtaaacctggagatagagggggttggaacaagggtttagaaag 38020136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 633 - 700
Target Start/End: Complemental strand, 15539809 - 15539742
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||| |||||||||||| ||||||||| |||||| | |||||| |||||| |||||||||||||||    
T  15539809 ttttactataaatatagacattgtatcagtgtaaaccttgagatatagggggttgaaacaagggttta 15539742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 698
Target Start/End: Original strand, 14837193 - 14837259
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtt 698  Q
    |||||||  ||||||||||| ||||||||| |||||| | ||||||||||| |||||||||||||||    
T  14837193 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaagggtt 14837259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 34979906 - 34979841
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||| |||||| || |||||| | ||||||||||||||||||||||| ||||| ||||    
T  34979906 ataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagcgtttagaaag 34979841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 605 - 662
Target Start/End: Original strand, 35028472 - 35028529
Alignment:
Q  605 gagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    |||||||||||||| |||| || ||||||||||| |||||||||||| ||||||||||    
T  35028472 gagatttgttccaattttttagggatacttttactataaatatagacattgtatcaga 35028529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 660
Target Start/End: Original strand, 45156918 - 45156999
Alignment:
Q  579 gaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatca 660  Q
    |||||||| ||||||||||||  | |  ||||||||||||||||| || ||| ||||||| ||||||||||||||| |||||    
T  45156918 gaaaaacataaacgtatttttaggcgtggatttgttccaaattttgagggatgcttttactataaatatagaccttatatca 45156999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 668
Target Start/End: Original strand, 40699202 - 40699266
Alignment:
Q  605 gagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaac 668  Q
    |||||||||||||| ||| | || ||||||||||| |||||||||||||||| ||||||||||||    
T  40699202 gagatttgttccaattttctgagggatacttttactataaatatagaccttgcatcagagtaaac 40699266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 5377770 - 5377691
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggaga----tagagggggctgaaacaagggtttataaag 705  Q
    |||||| || ||||||||||||||||| |||||| |||||| ||||    |||||||| |||||||||||||||| ||||    
T  5377770 tactttcactataaatatagaccttgtttcagagcaaactttgagagagatagaggggactgaaacaagggtttagaaag 5377691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 558
Target Start/End: Complemental strand, 6259351 - 6259245
Alignment:
Q  452 gagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactagaaaa 551  Q
    ||||||||||||||||| | ||| || ||||||||||||||  | |  | |||||||| ||| ||||||||||| |||| ||| |||||| ||| |||||    
T  6259351 gagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctgtgcaacgtggcactattggatgtttcagttttgaggaaagtcactggaaaa 6259252  T
Q  552 attgtgg 558  Q
    || ||||    
T  6259251 atcgtgg 6259245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 448 - 534
Target Start/End: Complemental strand, 40032587 - 40032501
Alignment:
Q  448 ttgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatga 534  Q
    ||||||||||||||||||||| | ||| || ||||||||||||||  | |  |||||||||| |||||||||| |||| |||| |||    
T  40032587 ttgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttga 40032501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 680
Target Start/End: Complemental strand, 35215956 - 35215883
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  35215956 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagag 35215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 675
Target Start/End: Complemental strand, 36559136 - 36559067
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||||||||    
T  36559136 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaacttggaga 36559067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 675
Target Start/End: Complemental strand, 36561413 - 36561344
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||||||||    
T  36561413 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaacttggaga 36561344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 658
Target Start/End: Original strand, 33603791 - 33603870
Alignment:
Q  579 gaaaaacagaaacgtatttttcagtg-gagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtat 658  Q
    ||||||||||||| |||||| ||| | |||||||||||||| || | || ||||||||||| ||||||||| |||||||||    
T  33603791 gaaaaacagaaacatatttt-cagcgtgagatttgttccaatttgttagggatacttttactataaatataaaccttgtat 33603870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 662
Target Start/End: Complemental strand, 37171128 - 37171049
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttt-tacgataaatatagaccttgtatcaga 662  Q
    |||| ||||||||||| ||||| |||||||||||| |||||||| | ||||||  || ||||||||| |||||||||||||    
T  37171128 aacaaaaacgtatttt-cagtgaagatttgttccatattttaagggttactttccactataaatataaaccttgtatcaga 37171049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 631 - 675
Target Start/End: Complemental strand, 45332428 - 45332384
Alignment:
Q  631 acttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||| ||||||||||||||||||||| || |||||||||||    
T  45332428 acttttactataaatatagaccttgtatcaaagcaaacttggaga 45332384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 488
Target Start/End: Original strand, 35107018 - 35107057
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtg 488  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  35107018 tgtgagagttaacttaaaattaggttatggagaaaacgtg 35107057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 628 - 662
Target Start/End: Complemental strand, 17897581 - 17897547
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcaga 662  Q
    ||||||||||| |||||||||||||||||||||||    
T  17897581 gatacttttactataaatatagaccttgtatcaga 17897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 553
Target Start/End: Complemental strand, 21521236 - 21521130
Alignment:
Q  447 attgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaacta 546  Q
    |||||||||||||||||||||| | ||| |  || |||||||||||  | |  |||||||||| |||||||||| |||| |||| ||||| |||  |||     
T  21521236 attgtgagagttaacttaaaatcaggttctacaggaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagttttgaagcaagccactg 21521137  T
Q  547 gaaaaat 553  Q
    |||||||    
T  21521136 gaaaaat 21521130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 705
Target Start/End: Original strand, 17848342 - 17848436
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||| ||||||| |||||||||| | |||||||||  ||| | | ||||||||||||||| |||| |||||||| ||||    
T  17848342 tttgttccaatttatgagggattcttttactataaatataggctttgtatcag--taatccttgagatagagggggctcaaacgagggtttagaaag 17848436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 534
Target Start/End: Complemental strand, 22407948 - 22407863
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatga 534  Q
    |||||||||||| ||||||||| ||| || || |||||||||||  |||  ||| ||| || ||||||||||||||| |||| |||    
T  22407948 tgtgagagttaatttaaaattaggttctgcaggaatcgtggcacgattgaagggtaacatggcacgattggatgtttcagttttga 22407863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 705
Target Start/End: Original strand, 38020162 - 38020195
Alignment:
Q  672 gagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||||||||||||||| ||||    
T  38020162 gagatagagggggctgaaacaagggtttagaaag 38020195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 2e-69; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 555 - 720
Target Start/End: Original strand, 22392350 - 22392515
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  22392350 gtggtacgatggtgcgctggaggcaaaaaacagaaatgtatttttcagtgcagatttgttccaaattgtaagcgatacttttactataaatatagacctt 22392449  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22392450 gtatcagagtaaactttgagatagagggggctgaaacaagggtttataaatcaaactagggtttgt 22392515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 449 - 705
Target Start/End: Complemental strand, 1049813 - 1049557
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactaga 548  Q
    |||||||||||||||||||| | | | || || |||||||||||  |||  |||||||||| |||||||||| |||| |||| ||||| |||  ||| ||    
T  1049813 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctgggcaacgtggcacgattggaggtttcagttttgaagcaaggtactgga 1049714  T
Q  549 aaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatata 648  Q
    ||||| |||| |||| |||||| ||| |||||| |||||||||||||||||  ||| |||||||||||||||||||||||| |||||||| |||||||||    
T  1049713 aaaatcgtggcacgaaggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatata 1049614  T
Q  649 gaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||    
T  1049613 gaccttgtattagagcaaactttgagatagagggggctgaaacaagggtttagaaag 1049557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 27306641 - 27306491
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| | |  ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27306641 gtggcacgatggtgcgctagcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 27306542  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  27306541 gtatcagagtaaactttgagatagagggggctgaaacaagggtttagaaag 27306491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 585 - 698
Target Start/End: Original strand, 35536 - 35649
Alignment:
Q  585 cagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagaggggg 684  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||    
T  35536 cagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagcaaactttgagatagaggggg 35635  T
Q  685 ctgaaacaagggtt 698  Q
    ||||||||||||||    
T  35636 ctgaaacaagggtt 35649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 44441 - 44591
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  || || |||| |||| |||||||  ||| |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  44441 gtggcacgatggtgcgctggcagcaaataacataaacatatttttgggtgcagatttgtaccaaattttaagcgatacttttactataaatatagacctt 44540  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  44541 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 44591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 500 - 705
Target Start/End: Original strand, 26804396 - 26804596
Alignment:
Q  500 gggcaacgtgtcacgattggatgttttagttatgaagaaagtaactagaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtattttt 599  Q
    ||||||||||  ||||||||| |||| |||| ||| | |||  | | ||||||| |||| ||||||||||| |||  || || ||||||||||||||||     
T  26804396 gggcaacgtggtacgattggaggtttcagttttgaggcaaggcagtggaaaaatcgtggcacgatggtgcgctggcagcaaataacagaaacgtattttg 26804495  T
Q  600 cagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttt 699  Q
      ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||    
T  26804496 g-gtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgt----gagtaaactttgagatagagggggctgaaacaagggttt 26804590  T
Q  700 ataaag 705  Q
    | ||||    
T  26804591 agaaag 26804596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 25542407 - 25542557
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttc-agtggagatttgttccaaattttaagcgatacttttacgataaatatagacct 653  Q
    |||| ||||||||||| |||  ||||||||||||||| |||||||  |||| |||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  25542407 gtggcacgatggtgcgctggcagcgaaaaacagaaacatattttttgagtgtagatttattccaaattttaagcgaaacttttactataaatatagacct 25542506  T
Q  654 tgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| |||||| |||||||| ||||||||||||| |||||| ||||    
T  25542507 tgtatcagagcaaactttgagataga-ggggctgaaacaaaggtttagaaag 25542557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 547 - 705
Target Start/End: Complemental strand, 40837163 - 40837004
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttc-agtggagatttgttccaaattttaagcgatacttttacgataaat 645  Q
    ||||||| |||| ||||||||| | |||  |||||||| |||||| |||||||  |||| ||||||||||||||||||||| || |||||||| ||||||    
T  40837163 gaaaaatcgtggcacgatggtgtgctggcagcgaaaaatagaaacatattttttgagtgcagatttgttccaaattttaagggaaacttttactataaat 40837064  T
Q  646 atagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||| ||||||||| ||||    
T  40837063 atagaccttgtatcagagcaaatttggagattgagggggctgaaagaagggtttagaaag 40837004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 560 - 705
Target Start/End: Original strand, 18567495 - 18567640
Alignment:
Q  560 acgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatc 659  Q
    ||||||||||| |||   |||| |||||||||||||||||  |  |  | ||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  18567495 acgatggtgcgctggcaacgaataacagaaacgtatttttttggtgcaaattgttccaaattttaagcgatacttttactataaatatagatcttgtatc 18567594  T
Q  660 agagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||    
T  18567595 agagtaaactttgagatagaaggggctgaaacaagggtttagaaag 18567640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 560 - 705
Target Start/End: Complemental strand, 31435454 - 31435309
Alignment:
Q  560 acgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatc 659  Q
    ||||||||||| |||   |||| |||||||||||||||||  |  |  | ||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  31435454 acgatggtgcgctggcaacgaataacagaaacgtatttttttggtgcaaattgttccaaattttaagcgatacttttactataaatatagatcttgtatc 31435355  T
Q  660 agagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||    
T  31435354 agagtaaactttgagatagaaggggctgaaacaagggtttagaaag 31435309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 3878449 - 3878604
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgata----aatataga 650  Q
    |||| |||||||| || |||  ||||| ||||||||||||||||   ||| ||||||||||||||||||||||||||||||||| |||    ||||||||    
T  3878449 gtggcacgatggtacgctggcagcgaataacagaaacgtattttgg-gtgcagatttgttccaaattttaagcgatacttttactataaattaatataga 3878547  T
Q  651 ccttgtatcagagtaaactt--ggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||| ||||    
T  3878548 ccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaaag 3878604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 583 - 700
Target Start/End: Original strand, 7188447 - 7188565
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagg 681  Q
    |||| ||||||||||||  |  |||||||||||||| ||| | || ||||||||||| |||||||||||| |||||||||||||||| | ||||||||||    
T  7188447 aacataaacgtatttttgggctgagatttgttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagg 7188546  T
Q  682 gggctgaaacaagggttta 700  Q
    |||||||||||||||||||    
T  7188547 gggctgaaacaagggttta 7188565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 578 - 658
Target Start/End: Original strand, 45366446 - 45366526
Alignment:
Q  578 cgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtat 658  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| ||||||||| |||||||||    
T  45366446 cgaaaaacagaaacgtatttttcagtgcagatttgttccaaattttaagggttacttttactataaatataaaccttgtat 45366526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 616 - 705
Target Start/End: Complemental strand, 22251893 - 22251804
Alignment:
Q  616 caaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||| |||||||| ||||||||| |||||| |||||||||||||| |||||||||| |||||||||||| ||||| ||||    
T  22251893 caaattttaagcgacacttttactataaatataaaccttgaatcagagtaaactttgagatagaggaggctgaaacaagagtttagaaag 22251804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 42331337 - 42331266
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  42331337 atacttttactataaatatagactttgtatcagactaaactttgagatagagggggctgaaacaagggttta 42331266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 31156271 - 31156173
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||| | ||| |||||||||| ||||||||||| |||||||||  | |||||| ||||||||||||||||||||||||||||| ||||    
T  31156271 atttgttccaaatttatgagctatacttttactataaatatagagcttgtatcaaggcaaactttgagatagagggggctgaaacaagggtttagaaag 31156173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 633 - 720
Target Start/End: Original strand, 24465503 - 24465591
Alignment:
Q  633 ttttacgataaatatagaccttgtatcaga-gtaaacttggagatagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    |||||| ||| |||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  24465503 ttttactatagatatagactttgtatcagatgtaaaccttgagatagagggggctgaaacaagggtttagaaatcaaactagggtttgt 24465591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 633 - 700
Target Start/End: Complemental strand, 37412462 - 37412395
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  37412462 ttttactataaatatagaccttgaatcagagtaaacctggagatatagggggctgaaacaagggttta 37412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 44724533 - 44724606
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| |||||||| |||||||||||||||||||||| ||||    
T  44724533 cttttactataaatatagacattgtatcagtgtaaacctggagatatagggggctgaaacaagggtttagaaag 44724606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 609 - 705
Target Start/End: Original strand, 11355189 - 11355285
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||| ||||||| |||||||||| | ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  11355189 tttgttccaatttatgagggattcttttactataaatataggctttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 11355285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 699
Target Start/End: Complemental strand, 20091928 - 20091808
Alignment:
Q  581 aaaacagaaacgtatttttcagtggagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagataga 679  Q
    ||||||||||||||||||   |   ||||||||||||| ||| | || ||||||||||| |||||||||||| || ||||||||||||| | ||||||||    
T  20091928 aaaacagaaacgtattttcaggcctagatttgttccaattttatgagggatacttttactataaatatagactttttatcagagtaaaccttgagataga 20091829  T
Q  680 gggggctg-aaacaagggttt 699  Q
    |||||||| ||||||||||||    
T  20091828 gggggctgaaaacaagggttt 20091808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 609 - 705
Target Start/End: Complemental strand, 20137467 - 20137371
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||| ||||||| |||||||| | | |||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  20137467 tttgttccaatttatgagggattcttttactataaatattggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaag 20137371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 633 - 700
Target Start/End: Original strand, 3677235 - 3677301
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  3677235 ttttactataaatatagatcttgaatcagagtaaacttggagataga-ggggctgaaacaagggttta 3677301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 13099814 - 13099743
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| |||| ||||||| | ||||||||||||| |||||||||||||||    
T  13099814 atacttttactataaatatagaccttgaatcaaagtaaaccttgagatagagggggttgaaacaagggttta 13099743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 633 - 700
Target Start/End: Original strand, 21990106 - 21990172
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  21990106 ttttactataaatatagaccttgaatcagagtaaacctggagataga-ggggctgaaacaagggttta 21990172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 3035646 - 3035748
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     ||||||||||||||||||||||||||||| |    
T  3035646 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttaga 3035745  T
Q  703 aag 705  Q
    |||    
T  3035746 aag 3035748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 21679981 - 21680054
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||| || |||||| | ||||||||||||||||||||||||||||| ||||    
T  21679981 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 21680054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 628 - 705
Target Start/End: Complemental strand, 22828972 - 22828895
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||| |||||||||| | ||||||| |||||||| | ||||||||||||||||||||||| ||||| ||||    
T  22828972 gatacttttactataaatataggctttgtatccgagtaaaccttgagatagagggggctgaaacaagagtttagaaag 22828895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 38393911 - 38394013
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     ||||||||||||||||||||||||||||| |    
T  38393911 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttaga 38394010  T
Q  703 aag 705  Q
    |||    
T  38394011 aag 38394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 7470359 - 7470284
Alignment:
Q  634 tttacgataaatatagaccttgtatcagagtaaacttggaga----tagagggggctgaaacaagggtttataaag 705  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||    ||||||||||||||||||||||||| ||||    
T  7470359 tttactataaatatagaccttgtatcagactaaactttgagagagatagagggggctgaaacaagggtttagaaag 7470284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 700
Target Start/End: Complemental strand, 4296271 - 4296202
Alignment:
Q  632 cttttacgataaatatagacctt-gtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| |||||||||||| || ||||||| |||||| | |||||||||||||||||||||||||||||    
T  4296271 cttttactataaatatagacatttgtatcagtgtaaaccttgagatagagggggctgaaacaagggttta 4296202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 628 - 704
Target Start/End: Original strand, 6332176 - 6332252
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggct-gaaacaagggtttataaa 704  Q
    ||||||||||| ||||||||| | ||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||    
T  6332176 gatacttttactataaatataaaacttgtatcagagtaacctt-gagagagagggggctggaaacaagggtttataaa 6332252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 634 - 700
Target Start/End: Complemental strand, 7472317 - 7472247
Alignment:
Q  634 tttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggttta 700  Q
    ||||| ||||||||||||||||||||||| |||||||     |||||||||||||||||||||||||||||    
T  7472317 tttactataaatatagaccttgtatcagactaaactttgagagagatagagggggctgaaacaagggttta 7472247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 18345466 - 18345568
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  | |||||    |||||||||||||| ||||||||||||||| |    
T  18345466 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctgaactttgagggagatagagggggttgaaacaagggtttaga 18345565  T
Q  703 aag 705  Q
    |||    
T  18345566 aag 18345568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 21678020 - 21678093
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||  ||||||||  |||||| | ||||||||||||||||||||||||||||| ||||    
T  21678020 cttttactataaatatagatattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaaag 21678093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 640 - 705
Target Start/End: Original strand, 24258425 - 24258490
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||   |||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  24258425 ataaatataggttttgtatcagagtaaacattgagatagagggggctgaaacaagggtttagaaag 24258490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 640 - 705
Target Start/End: Original strand, 24748556 - 24748621
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||| ||||||||| |||||||| ||  ||||||||||||||||||||||||| ||||    
T  24748556 ataaatatagacattgtatcagtgtaaactttgacttagagggggctgaaacaagggtttagaaag 24748621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 696
Target Start/End: Original strand, 11757153 - 11757246
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaaggg 696  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     |||||||||||||||||||||||||    
T  11757153 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaaggg 11757246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 632 - 700
Target Start/End: Complemental strand, 39146322 - 39146254
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| ||||||||||||  |||||||| |||||| | ||||| |||||||||||||||||||||||    
T  39146322 cttttactataaatatagacactgtatcagtgtaaaccttgagatggagggggctgaaacaagggttta 39146254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 443546 - 443617
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||| ||| |||||||||||| | ||||||||||| ||| |||||| ||||||    
T  443546 atacttttactataaatatagactttgaatcagagtaaaccttgagatagagggagctaaaacaatggttta 443617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 640 - 700
Target Start/End: Complemental strand, 7094753 - 7094689
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggaga----tagagggggctgaaacaagggttta 700  Q
    |||||||||||||||||||||||| |||||| ||||    |||||||||||||||||||||||||    
T  7094753 ataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggttta 7094689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 696
Target Start/End: Original strand, 20299405 - 20299476
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaaggg 696  Q
    |||||||||| ||||||||||||||||||||||  |||||||     |||||||||||||||||||||||||    
T  20299405 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaaggg 20299476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 690
Target Start/End: Complemental strand, 30906389 - 30906327
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaa 690  Q
    ||||||||| | ||||||||||||||||||| ||||||||  | |||||||||||||||||||    
T  30906389 gatacttttgctataaatatagaccttgtataagagtaaatcttgagatagagggggctgaaa 30906327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 48457601 - 48457680
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || ||||||||||||||||||||||  |||||||     ||||||||||||||||||||||||||||| ||||    
T  48457601 tactttcactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaaag 48457680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 680
Target Start/End: Original strand, 1606399 - 1606472
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||| || |||||| |||||||||    
T  1606399 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaaagcaaactttgagatagag 1606472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 634 - 700
Target Start/End: Complemental strand, 7092512 - 7092442
Alignment:
Q  634 tttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggttta 700  Q
    ||||| |||||||||||||||||||||||| ||||||     ||||| |||||||||||||||||||||||    
T  7092512 tttactataaatatagaccttgtatcagagcaaactttgagagagatggagggggctgaaacaagggttta 7092442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 7349639 - 7349535
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt------ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||       ||||||||||||||||||||| |||||||    
T  7349639 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaggggttta 7349540  T
Q  701 taaag 705  Q
     ||||    
T  7349539 gaaag 7349535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 7352018 - 7351914
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga------tagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||| ||||||||||||  ||||||| ||||      |||||||||||||||||||||||||    
T  7352018 atttgttccaaatttatgagttatacttttactataaatataaaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggttta 7351919  T
Q  701 taaag 705  Q
     ||||    
T  7351918 gaaag 7351914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 640 - 700
Target Start/End: Complemental strand, 24817676 - 24817616
Alignment:
Q  640 ataaatatagaccttgtatcaga-gtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||    
T  24817676 ataaatatagaccttgtatcagatgtaaaccttgagataga-ggggctgaaacaagggttta 24817616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 28485491 - 28485593
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     |||||||| |||| ||||||||||||||| |    
T  28485491 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaaggggttgaaacaagggtttaga 28485590  T
Q  703 aag 705  Q
    |||    
T  28485591 aag 28485593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 640 - 705
Target Start/End: Original strand, 20625996 - 20626065
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggaga----tagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||| ||||||| ||||||| ||||    ||||||||||||||||||||||||| ||||    
T  20625996 ataaatatagaccttctatcagactaaactttgagagagatagagggggctgaaacaagggtttagaaag 20626065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 640 - 705
Target Start/End: Original strand, 20629887 - 20629956
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggaga----tagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||| ||||||| ||||||| ||||    ||||||||||||||||||||||||| ||||    
T  20629887 ataaatatagaccttctatcagactaaactttgagagagatagagggggctgaaacaagggtttagaaag 20629956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 640 - 705
Target Start/End: Original strand, 20642306 - 20642375
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggaga----tagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||| ||||||| ||||||| ||||    ||||||||||||||||||||||||| ||||    
T  20642306 ataaatatagaccttctatcagactaaactttgagagagatagagggggctgaaacaagggtttagaaag 20642375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 632 - 700
Target Start/End: Original strand, 9680768 - 9680841
Alignment:
Q  632 cttttacgataaatatagaccttgtatcaga-gtaaa-cttg---gagatagagggggctgaaacaagggttta 700  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||   ||||||||||||| |||||||||||||||    
T  9680768 cttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggttgaaacaagggttta 9680841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 653 - 700
Target Start/End: Complemental strand, 21592457 - 21592410
Alignment:
Q  653 ttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||||    
T  21592457 ttgtatcagtgtaaactttgagatagagggggctgaaacaaaggttta 21592410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 629 - 705
Target Start/End: Original strand, 28487500 - 28487580
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| | ||||||||||||| ||||||||  |||||||     ||||||||||||||||||||||||||||| ||||    
T  28487500 atacttttcctataaatatagaccatgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaaag 28487580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 583 - 658
Target Start/End: Original strand, 42006471 - 42006545
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtat 658  Q
    |||| ||||||||||| ||||| |||||||||||| |||||||| | ||||||||| ||||||||| ||| |||||    
T  42006471 aacataaacgtatttt-cagtgaagatttgttccatattttaagggttacttttactataaatataaaccgtgtat 42006545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 20297309 - 20297384
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| | |||||| |||||||||||||  |||||||     |||||||||||||||||||||||||||||    
T  20297309 atacttttactaaaaatatggaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggttta 20297384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 675
Target Start/End: Complemental strand, 9027465 - 9027396
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||||||||    
T  9027465 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaacttggaga 9027396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 693
Target Start/End: Original strand, 25276095 - 25276156
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaa 693  Q
    ||||||| |||||||||  | ||||||||||| |||||| ||||||||||||||| ||||||    
T  25276095 cttttactataaatatatgctttgtatcagagcaaactttgagatagagggggctaaaacaa 25276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 700
Target Start/End: Original strand, 42223110 - 42223179
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagataga-gggggctgaaacaagggttta 700  Q
    ||||||| |||||||||| | |||||||||||||||| | |||||||| | ||| |||||||||||||||    
T  42223110 cttttactataaatataggctttgtatcagagtaaaccttgagatagatgtgggatgaaacaagggttta 42223179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 680
Target Start/End: Complemental strand, 43253884 - 43253811
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  43253884 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagag 43253811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 633 - 695
Target Start/End: Original strand, 9679009 - 9679076
Alignment:
Q  633 ttttacgataaatatagaccttgtatcaga-gtaaactt----ggagatagagggggctgaaacaagg 695  Q
    |||||| ||||||||||| ||||||||||| ||||||||     ||||||||||||||||||||||||    
T  9679009 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaagg 9679076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 608 - 661
Target Start/End: Original strand, 38396215 - 38396269
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcag 661  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||    
T  38396215 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcag 38396269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 525
Target Start/End: Original strand, 35374 - 35455
Alignment:
Q  444 gttattgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttt 525  Q
    ||||||||||||||||||||||||| | | | || || |||||||||||  |||   ||||||||| |||||||||| ||||    
T  35374 gttattgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctaggcaacgtggcacgattggaggttt 35455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 680
Target Start/End: Original strand, 1849894 - 1849967
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||| ||| || |||||| |||| ||||    
T  1849894 atttgttccaaatttatgagttatacttttactataaatatagaccttgtttcatagcaaactttgagagagag 1849967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 705
Target Start/End: Original strand, 1849975 - 1850008
Alignment:
Q  672 gagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||||||||||||||| ||||    
T  1849975 gagatagagggggctgaaacaagggtttagaaag 1850008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 675
Target Start/End: Original strand, 22108089 - 22108158
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||| ||||    
T  22108089 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgaga 22108158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 675
Target Start/End: Original strand, 22137100 - 22137169
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||| ||||    
T  22137100 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgaga 22137169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 447 - 488
Target Start/End: Original strand, 22392290 - 22392331
Alignment:
Q  447 attgtgagagttaacttaaaattatgttatggagaaatcgtg 488  Q
    |||||||||||||| ||||||| | |||||||||||||||||    
T  22392290 attgtgagagttaatttaaaatcaggttatggagaaatcgtg 22392331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 675
Target Start/End: Original strand, 40549849 - 40549918
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||| ||||    
T  40549849 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgaga 40549918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 675
Target Start/End: Original strand, 40552127 - 40552196
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||| ||||    
T  40552127 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgaga 40552196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 3e-62; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 449 - 705
Target Start/End: Original strand, 11162891 - 11163147
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttat-gaagaaagtaactag 547  Q
    |||||||||||||||||||| | | | || || |||||||||||  |||  |||||||||| |||||| ||| |||| |||| | || | |||  ||| |    
T  11162891 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctgggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 11162989  T
Q  548 aaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatat 647  Q
    ||||||||||| ||||||||||| ||| |||||| |||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||||||||    
T  11162990 aaaaattgtggcacgatggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttacgataaatat 11163089  T
Q  648 agaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  11163090 agaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 11163147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 695
Target Start/End: Complemental strand, 48362186 - 48361940
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactaga 548  Q
    |||||||||||||||||||| | ||| || ||||||||||||||  | || |||||||||| |||||||||| |||| |||| ||| | |||||||||||    
T  48362186 tgtgagagttaacttaaaatcaggttctgtagaaatcgtggcacgatggttgggcaacgtggcacgattggaagtttcagttttgaggcaagtaactaga 48362087  T
Q  549 aaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatata 648  Q
        | |||| | ||||||||| |||  ||||| | |||||||||||||||   || ||||||||||||||||||||||||||||||||| |||||||||    
T  48362086 tttttcgtggcatgatggtgcgctggcagcgaatagcagaaacgtatttttggatgcagatttgttccaaattttaagcgatacttttactataaatata 48361987  T
Q  649 gaccttgtatcagagtaaacttggagatagagggggctgaaacaagg 695  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||    
T  48361986 gaccttgtatcatagtaaactttgagatacagggggctgaaacaagg 48361940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 5523025 - 5522875
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  5523025 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtttcaaattttaagcgaaacttttactataaatatagacctt 5522926  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  5522925 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 5522875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 22114715 - 22114565
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| |||||||||||||||||  ||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  22114715 gtggcacgatggtgcgatggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 22114616  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  22114615 gtatcagagcaaacttggagatagaaggggctgaaacaagggtttagaaag 22114565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 447 - 705
Target Start/End: Original strand, 11170143 - 11170401
Alignment:
Q  447 attgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttat-gaagaaagtaact 545  Q
    |||||||||||||||||||||| | | | || || |||||||||||  |||  |||||||||| |||||| ||| ||||  ||| | || | |||  |||    
T  11170143 attgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacggttgctgggcaacgtggcacgat-ggaggtttcggtttttgaggcaaggcact 11170241  T
Q  546 agaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaat 645  Q
     ||||||| ||||  |||| ||||| ||| |||||| ||||||||| |||||||  ||| |||||||||||||||||||||||| |||||||| ||||||    
T  11170242 ggaaaaatcgtggctcgattgtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaat 11170341  T
Q  646 atagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  11170342 atagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 11170401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 1321288 - 1321438
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||| | |||  ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  1321288 gtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatatagacttt 1321387  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  1321388 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 1321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 26720395 - 26720545
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||| | |||  ||||||||||||||| ||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  26720395 gtggcacgatggtgtgctggcagcgaaaaacagaaacatattttttagtgcagatttgttccaaattttaagcaatacttttactataaatatagacctt 26720494  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  26720495 gtatcagagcaaacttggagatagagggggctgaaataagggtttagaaag 26720545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 3859375 - 3859525
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| || | ||||||||||||  ||| ||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  3859375 gtggcacgatggtgcgctggcggcgaataatataaacgtatttttgggtgcagatttgtttcaaattttaagcgaaacttttactataaatatagacctt 3859474  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  3859475 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 3859525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 5191500 - 5191650
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||||||||||||||| || |||||||| |||||||||||||||    
T  5191500 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagggaaacttttactataaatatagacctt 5191599  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||  || |||||||||||||||||||||||||||||||||||| ||||    
T  5191600 gtatctaagcaaacttggagatagagggggctgaaacaagggtttagaaag 5191650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 449 - 690
Target Start/End: Original strand, 24176999 - 24177261
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactaga 548  Q
    |||||||||||||||||||| | ||| ||||||||||||||||| ||||  |||||||||| ||||||||| ||||| |||| ||||| |||| ||| ||    
T  24176999 tgtgagagttaacttaaaatcaagttctggagaaatcgtggcacgtttgcagggcaacgtggcacgattggttgtttcagttctgaagcaagtcactgga 24177098  T
Q  549 aaaattgtggtacga---------------------tggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagc 627  Q
    |||| ||||| ||||                     ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||     
T  24177099 aaaaatgtggcacgatgggatcgcaatgtggcacgatggtgcgttggaggcgaaaaacataaacgtatttttaagtgcagatttgttccaaattttaagg 24177198  T
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaa 690  Q
    ||||||||||  ||||||||||||||||||||| ||||||| | ||| |||||||||||||||    
T  24177199 gatacttttattataaatatagaccttgtatcatagtaaacattgagctagagggggctgaaa 24177261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 532 - 705
Target Start/End: Original strand, 18162488 - 18162660
Alignment:
Q  532 tgaagaaagtaactagaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgata 631  Q
    ||||| |||| ||| ||||||| |||  ||||||||||| |||  ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  18162488 tgaagcaagtcactggaaaaatcgtgccacgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgata 18162587  T
Q  632 cttttacgataaatatagaccttgtatca-gagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||    
T  18162588 cttttactataaatatagaccttgtatcatgagtaaacttggagataga--gggatgaaacaagggtttagaaag 18162660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 606 - 700
Target Start/End: Original strand, 15780758 - 15780852
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15780758 agatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 15780852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 18099580 - 18099435
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| || ||||||||||||||  ||| |||||||||||||||||||||||| |||||||| || ||||||||||||    
T  18099580 gtggcacgatggtgcgctggcggcgaacaatagaaacgtatttttgggtgcagatttgttccaaattttaagcgagacttttactat-aatatagacctt 18099482  T
Q  655 gtatcagagtaaacttg-gagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  18099481 gtatcagagtaaacttgagagatagagggggctgaaacaagggttta 18099435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 583 - 705
Target Start/End: Complemental strand, 12268348 - 12268226
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagaggg 682  Q
    |||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  12268348 aacagagacgtatttttcagtgcaaatttgttccaaattttaagcgatacttttactataaatatagaacttgtatcagagtaaactttgagatagaggg 12268249  T
Q  683 ggctgaaacaagggtttataaag 705  Q
     ||||||||||| ||||| ||||    
T  12268248 agctgaaacaagagtttagaaag 12268226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 10956437 - 10956292
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |||| ||||||||||||  ||| |||||||||||||||||||||| ||  |||||| |||||||||||||||    
T  10956437 gtggcacgatggtgcgctggcagcgaataacataaacgtatttttaggtgcagatttgttccaaattttaagcaatttttttactataaatatagacctt 10956338  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||| || ||||||||||||||||||||||||||||    
T  10956337 gtatcagagtaaacatgaagatagagggggctgaaacaagggttta 10956292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 444 - 698
Target Start/End: Original strand, 32218831 - 32219085
Alignment:
Q  444 gttattgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaa 543  Q
    ||||||||||||||||||||||||| | ||| || ||||||||||||||  |  | |||||||||| |||||||||| |||| |  | ||| | ||||      
T  32218831 gttattgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatgattgggcaacgtggcacgattggaggtttcaactttgaggcaagtcg 32218930  T
Q  544 ctagaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataa 643  Q
    || ||      |||| ||||||||||| |||  ||||| || ||||||||||||||  ||| |||||||||||||||||||||  ||||||| |  ||||    
T  32218931 ctggattttccgtggcacgatggtgcgctggcagcgaataagagaaacgtatttttgggtgcagatttgttccaaattttaagtaatactttcagtataa 32219030  T
Q  644 atatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtt 698  Q
    |||||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  32219031 atatagaccttgtatctgactaaactttgagatagagggggctgaaacaagggtt 32219085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 10084803 - 10084649
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  10084803 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatgcttttactataaatatagacctt 10084704  T
Q  655 gtatcagagtaaactt----ggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||| ||| ||||||     |||||||||||||||| |||||||||||| ||||    
T  10084703 gtatcggagcaaactttgagagagatagagggggctggaacaagggtttagaaag 10084649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 10958733 - 10958588
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  || || |||||||||||||||||  ||| |||||||||||||||||||||| ||  |||||| |||||||||||||||    
T  10958733 gtggcacgatggtgcgctggcagccaataacagaaacgtatttttaggtgcagatttgttccaaattttaagcaatttttttactataaatatagacctt 10958634  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||    
T  10958633 gtatcagagtaaacataaagatagagggggctgaaacaagggttta 10958588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 576 - 700
Target Start/End: Complemental strand, 18097290 - 18097165
Alignment:
Q  576 ggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttg-gag 674  Q
    |||||| |||||||||||||||||  ||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||    
T  18097290 ggcgaataacagaaacgtatttttgggtgcagatttgtttcaaattttaagcgagacttttactataaatatagaccttgtatcatagtaaacttgagag 18097191  T
Q  675 atagagggggctgaaacaagggttta 700  Q
    |||||||||||| |||||||||||||    
T  18097190 atagagggggctcaaacaagggttta 18097165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 32264453 - 32264299
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| ||||||||| |||||||  ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  32264453 gtggcacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgtttcaaattttaagcgatacttttactataaatatagacctt 32264354  T
Q  655 gtatcagagta----aacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||    ||||| ||||||||||||||| ||||||||||||| ||||    
T  32264353 gtatcagagtaaattaactttgagatagagggggctcaaacaagggtttagaaag 32264299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 578 - 705
Target Start/End: Original strand, 45882809 - 45882936
Alignment:
Q  578 cgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagata 677  Q
    |||| ||||||||| |||||||  ||| |||||||||  |||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||    
T  45882809 cgaataacagaaacctatttttgggtgcagatttgttgaaaattttaagcgatacttttactataaatatagaccttgtatcatagtaaactatgagata 45882908  T
Q  678 gagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||||||||| ||||    
T  45882909 gagggggctgaaacaagggtttagaaag 45882936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 24979554 - 24979704
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| |||||||| || |||  ||||| |||| |||| |||||||  ||| |||||||||||||||||||||  ||||||| || ||||||||| |||||    
T  24979554 gtggcacgatggtacgctggtagcgaataacataaacatattttttggtgcagatttgttccaaattttaagtaatactttcactataaatatatacctt 24979653  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  24979654 gtatcagagtaaactttgagatagagggggctgaaacaagggtttagaaag 24979704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 10191723 - 10191569
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  10191723 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaagcgatacttttactataaatatagacctt 10191624  T
Q  655 gtatcagagtaaactt----ggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||| ||| ||||||     |||||| ||||||||| |||||||||||| ||||    
T  10191623 gtatcggagcaaactttgagagagataaagggggctggaacaagggtttagaaag 10191569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 20383343 - 20383480
Alignment:
Q  301 atggaattgtgctatggggaacaactgaattattcatcaagaagtgatgttaatcatcatgtattgtcatgacatgagaattgttcttaaagttatcaag 400  Q
    |||||||| ||||||||| ||||||||| ||||| |  |||||||||||||| ||||||||||||||||||||||| || |||| |  ||||||| ||||    
T  20383343 atggaattctgctatgggtaacaactgagttatttagtaagaagtgatgttagtcatcatgtattgtcatgacatgggagttgtccacaaagttaccaag 20383442  T
Q  401 tttgagaagttgaagattccaagatttgaagaggtagt 438  Q
    | ||||||||||||| |||||||| |||||||||||||    
T  20383443 tctgagaagttgaaggttccaagaattgaagaggtagt 20383480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 547 - 700
Target Start/End: Original strand, 35777261 - 35777413
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaata 646  Q
    ||||||| |||| ||||||||||| |||  || ||||||| |||| |||||||  ||| ||||||||| || ||||||||| | |||||||| |||||||    
T  35777261 gaaaaatcgtggcacgatggtgcgctggcagc-aaaaacataaacatatttttgggtgcagatttgttacagattttaagcaagacttttactataaata 35777359  T
Q  647 tagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||| |||||||| || |||||| |||||||||||||||||||||||||||||    
T  35777360 tagacattgtatcaaagcaaactttgagatagagggggctgaaacaagggttta 35777413  T

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Target: chr3; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 4308616 - 4308541
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  4308616 tactttcactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 4308541  T

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Target: chr3; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 43226008 - 43226083
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  43226008 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 43226083  T

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Target: chr3; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 575 - 662
Target Start/End: Complemental strand, 46967025 - 46966938
Alignment:
Q  575 aggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    ||||||||||||||||| ||||||||| || ||||||||||||||||||||| | ||||||||| ||||||||| || ||||||||||    
T  46967025 aggcgaaaaacagaaacatatttttcaatgcagatttgttccaaattttaagggttacttttactataaatataaacattgtatcaga 46966938  T

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Target: chr3; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 606 - 705
Target Start/End: Complemental strand, 6063807 - 6063706
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaactt--ggagatagagggggctgaaacaagggtttataa 703  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||||||||| || ||||||   ||||||||||||||||||||||||||||| ||    
T  6063807 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagagatagagggggctgaaacaagggtttagaa 6063708  T
Q  704 ag 705  Q
    ||    
T  6063707 ag 6063706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 640 - 705
Target Start/End: Original strand, 6561742 - 6561807
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  6561742 ataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaag 6561807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 606 - 705
Target Start/End: Complemental strand, 6066156 - 6066056
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag-ggggctgaaacaagggtttataaa 704  Q
    ||||||||| || |||||||||   |||||||| ||||||||||||||||||||| || |||||| ||||||||| |||||||||||||||||||| |||    
T  6066156 agatttgttacagattttaagcagaacttttactataaatatagaccttgtatcaaagcaaactttgagatagaggggggctgaaacaagggtttagaaa 6066057  T
Q  705 g 705  Q
    |    
T  6066056 g 6066056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 609 - 705
Target Start/End: Complemental strand, 28761784 - 28761688
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||||||||||| |||||||||||| ||| |||||||||||| | ||||||||||||| ||||||||||||||| ||||    
T  28761784 tttgttccaatttatgagggatacttttactataaatatagactttgcatcagagtaaaccttgagatagagggggttgaaacaagggtttagaaag 28761688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 606 - 705
Target Start/End: Original strand, 38889937 - 38890037
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttat 701  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||   || ||||||     |||||||||||||||||||||||||||||     
T  38889937 agatttgttccaaattttaagcgaaacttttactataaatatagaccttgtat---agcaaactttgagagagatagagggggctgaaacaagggtttag 38890033  T
Q  702 aaag 705  Q
    ||||    
T  38890034 aaag 38890037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 629 - 705
Target Start/End: Original strand, 51943292 - 51943368
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||||||||||| |||||||||| |||||| ||||    
T  51943292 atacttttactataaatatagaccttgaatcagagtaaacctggagatagagggtgctgaaacaaaggtttagaaag 51943368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 581 - 660
Target Start/End: Original strand, 13893267 - 13893345
Alignment:
Q  581 aaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatca 660  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||    
T  13893267 aaaacagaaacgtatttt-cagtgcagatttgttccaaattttaagggttacttttactataaatatagacattgtatca 13893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 43228213 - 43228288
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  43228213 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagagtttagaaag 43228288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 51727341 - 51727266
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||    
T  51727341 tactttcactataaatatagaccttgtatcagagcaaactttgagataaagggggctgaaacaagggtttagaaag 51727266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 628 - 703
Target Start/End: Original strand, 53597161 - 53597235
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataa 703  Q
    ||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||    
T  53597161 gatacttttactataaatatagaccttgtatcagagtaaaccttgagataga-ggggatgaaacaagggtttataa 53597235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 53915832 - 53915761
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||||    
T  53915832 atacttttactataaatatagaccttgaatcagagtaaaccttaagatagagggggctgaaacaagggttta 53915761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 629 - 695
Target Start/End: Original strand, 1313331 - 1313397
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagg 695  Q
    |||||||||| |||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  1313331 atacttttactataaatatagaccttgaatcagagtaaaccttgagatagagggggctgaaacaagg 1313397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 583 - 700
Target Start/End: Original strand, 23633334 - 23633452
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagg 681  Q
    ||||||||||||||||  ||   ||||||||||||| ||| | || ||||||||||| |||||||||||| |||||||||||||||| | |||||||||     
T  23633334 aacagaaacgtattttcgagcctagatttgttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagaga 23633433  T
Q  682 gggctgaaacaagggttta 700  Q
    ||||| |||||||| ||||    
T  23633434 gggctaaaacaaggattta 23633452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 606 - 700
Target Start/End: Original strand, 50493897 - 50493991
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| || |||||||||   ||||| || ||||||||||||||||||||| || |||||  |||||||||||||||||||||||||||||    
T  50493897 agatttgttacagattttaagcaggactttcactataaatatagaccttgtatcaaagcaaactgagagatagagggggctgaaacaagggttta 50493991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 1627016 - 1626943
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  1627016 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 1626943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 35918284 - 35918209
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || ||||||||||||||||||||| || ||| || ||||||||||||||||||||||||||||| ||||    
T  35918284 tactttcactataaatatagaccttgtatcatagcaaattttgagatagagggggctgaaacaagggtttagaaag 35918209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 4104257 - 4104155
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     ||||||||||||||||||||||||||||| |    
T  4104257 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttaga 4104158  T
Q  703 aag 705  Q
    |||    
T  4104157 aag 4104155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 633 - 710
Target Start/End: Complemental strand, 27635959 - 27635882
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaagcaaac 710  Q
    |||||| | |||||||||||||| || ||||||||| | ||||||||||||||||||||||||||||| || ||||||    
T  27635959 ttttactacaaatatagaccttgaattagagtaaaccttgagatagagggggctgaaacaagggtttagaatgcaaac 27635882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 28137628 - 28137555
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||  | |||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  28137628 cttttactataaatatatgcgttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaag 28137555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 47701928 - 47701855
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | |||||| |||||||||||||||||||||| ||||    
T  47701928 cttttactataaatatagacattgtatcagtgtaaaccttgagataaagggggctgaaacaagggtttagaaag 47701855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 455802 - 455904
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaa-cttg---gagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||| ||||   ||||||||||||||||||||||||||||| |    
T  455802 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaaccttgagagagatagagggggctgaaacaagggtttaga 455901  T
Q  703 aag 705  Q
    |||    
T  455902 aag 455904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 458179 - 458281
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaa-cttg---gagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||| ||||   ||||||||||||||||||||||||||||| |    
T  458179 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaaccttgagagagatagagggggctgaaacaagggtttaga 458278  T
Q  703 aag 705  Q
    |||    
T  458279 aag 458281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 633 - 705
Target Start/End: Complemental strand, 51675087 - 51675015
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| |||||||||||| ||||||||  |||||| | ||||||||||||||||||||||||||||| ||||    
T  51675087 ttttactataaatatagacgttgtatcaatgtaaacgttgagatagagggggctgaaacaagggtttagaaag 51675015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 633 - 700
Target Start/End: Original strand, 3306724 - 3306791
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||| |||||||||||| ||||||||| |||||| | |||||| ||||||||||||||||||||||    
T  3306724 ttttactataaatatagacattgtatcagtgtaaacctagagatatagggggctgaaacaagggttta 3306791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 53918000 - 53917929
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| |||||| ||||| | ||||| |||||||||||||||| ||||||    
T  53918000 atacttttactataaatatagaccttgaatcagattaaaccttgagatggagggggctgaaacaatggttta 53917929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 606 - 680
Target Start/End: Complemental strand, 6719470 - 6719396
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||| || ||||||||| | |||||||| |||||||||||||||||||||||| |||||| |||| ||||    
T  6719470 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcagagcaaactttgagagagag 6719396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 3314608 - 3314681
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||  ||||||||| |||||| | ||||||||||||||||||| ||||||||| ||||    
T  3314608 cttttactataaatatagatattgtatcagtgtaaaccttgagatagagggggctgaaataagggtttagaaag 3314681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 628 - 705
Target Start/End: Complemental strand, 4560602 - 4560525
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| || |||| |||||||  ||||||| ||||||| | |||||||||||||||||||||| |||||||||||    
T  4560602 gatactttcactataagtatagactatgtatcatagtaaacattgagatagagggggctgaaacaatggtttataaag 4560525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 43423796 - 43423723
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||  |||||| | |||| |||||||||||||||||||||||| ||||    
T  43423796 cttttactataaatatagacattgtatcactgtaaaccttgagaaagagggggctgaaacaagggtttagaaag 43423723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 700
Target Start/End: Original strand, 746650 - 746749
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt------ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||       |||||||||||||||||||||||||||||    
T  746650 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggttta 746749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 632 - 700
Target Start/End: Complemental strand, 880785 - 880717
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| |||||||||||| ||||||||| |||||| | |||||||||||| |||||||||| |||||    
T  880785 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaggggtctgaaacaagagttta 880717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 632 - 700
Target Start/End: Complemental strand, 5927097 - 5927029
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| |||||||||||| ||||||| | |||||| | ||||||||| |||||||||||||||||||    
T  5927097 cttttactataaatatagacattgtatcggtgtaaaccttgagatagagagggctgaaacaagggttta 5927029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 632 - 700
Target Start/End: Complemental strand, 28100374 - 28100306
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| |||||||||  | |||||||||||||| | | |||||||||||||||||||||||||||||    
T  28100374 cttttactataaatataagcgttgtatcagagtaacccttgagatagagggggctgaaacaagggttta 28100306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 633 - 705
Target Start/End: Complemental strand, 43421747 - 43421675
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| |||||||||||| ||||||||| |||||| | |||||||| |||| ||||||||||||||| ||||    
T  43421747 ttttactataaatatagacattgtatcagtgtaaaccttgagatagaaggggttgaaacaagggtttagaaag 43421675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 632 - 700
Target Start/End: Complemental strand, 53468788 - 53468720
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| |||||||||||| ||||||||| |||||| |  ||||| ||||||||||||||||||||||    
T  53468788 cttttactataaatatagacattgtatcagtgtaaacctttagataaagggggctgaaacaagggttta 53468720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 606 - 686
Target Start/End: Complemental strand, 53896555 - 53896475
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggct 686  Q
    ||||||||| || |||||||||   ||||| || ||||||||||||||||||||| || |||||| |||||||||||||||    
T  53896555 agatttgttacagattttaagcaggactttcactataaatatagaccttgtatcaaagcaaactttgagatagagggggct 53896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 696
Target Start/End: Original strand, 6484307 - 6484373
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaaggg 696  Q
    ||||||| | |||||||||| | ||||||||| |||||| | |||||||||||||||||||||||||    
T  6484307 tacttttgctataaatataggcattgtatcagtgtaaaccttgagatagagggggctgaaacaaggg 6484373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 700
Target Start/End: Original strand, 23636901 - 23637019
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagg 681  Q
    ||||||||| |||||||| |   ||||||||| ||| ||| | || |||| |||||  ||||||||| || |||||||||||||||| | ||||||||||    
T  23636901 aacagaaacatatttttcggcctagatttgtttcaattttatgagggataattttaatataaatatatactttgtatcagagtaaaccttgagatagagg 23637000  T
Q  682 gggctgaaacaagggttta 700  Q
     |||| |||||||||||||    
T  23637001 aggctaaaacaagggttta 23637019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 690
Target Start/End: Original strand, 28180948 - 28181006
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaa 690  Q
    ||||||| |||||||||||| ||||||||| |||||| | |||||||||||||||||||    
T  28180948 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaa 28181006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 700
Target Start/End: Original strand, 31151271 - 31151341
Alignment:
Q  632 cttttacgataaatatagaccttgtatcaga-gtaaacttggagatagagggggctg-aaacaagggttta 700  Q
    ||||||| |||||||||||| |||||||||| |||||| | |||||||||||||||| |||||||||||||    
T  31151271 cttttactataaatatagactttgtatcagatgtaaacctcgagatagagggggctgaaaacaagggttta 31151341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 606 - 663
Target Start/End: Original strand, 5886183 - 5886240
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagag 663  Q
    ||||||||| || ||||||||||| |||||||| ||||||||||||||| ||||||||    
T  5886183 agatttgttacagattttaagcgaaacttttactataaatatagaccttttatcagag 5886240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 606 - 663
Target Start/End: Original strand, 5899658 - 5899715
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagag 663  Q
    ||||||||| || ||||||||||| |||||||| ||||||||||||||| ||||||||    
T  5899658 agatttgttacagattttaagcgagacttttactataaatatagaccttttatcagag 5899715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 628 - 720
Target Start/End: Complemental strand, 13420509 - 13420419
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    ||||||||||| ||||||||||   |||||||| || |||| | |||||| ||| ||||||||||||||||  |||| |||||||||||||||    
T  13420509 gatacttttactataaatataggttttgtatcaaagcaaaccttgagatataggaggctgaaacaagggtt--taaatcaaactagggtttgt 13420419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 28102335 - 28102262
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||  | |||||| ||||||| | | ||||||||||||||||||||||||||||| ||||    
T  28102335 cttttactataaatataagcgttgtattagagtaacccttgagatagagggggctgaaacaagggtttagaaag 28102262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 36011751 - 36011824
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||| || |||||| | |||||| ||||||||||||||||| |||| ||||    
T  36011751 cttttactataaatatagacattgtattagtgtaaaccttgagataaagggggctgaaacaaggatttagaaag 36011824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 53591119 - 53591192
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||| || |||||| | |||||||||| |||||||||||| ||||| ||||    
T  53591119 cttttactataaatatagacattgtataagtgtaaaccttgagatagaggaggctgaaacaagagtttagaaag 53591192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 700
Target Start/End: Complemental strand, 890104 - 890036
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| |||||||||||  ||||||||| |||||| | ||||||||||  |||||||||||||||||    
T  890104 cttttactataaatatagatattgtatcagtgtaaaccttgagatagaggaagctgaaacaagggttta 890036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 633 - 705
Target Start/End: Original strand, 6231374 - 6231446
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| |||||||||||| ||||||||| |||||  | ||||||||| |||||||||||||| |||| ||||    
T  6231374 ttttactataaatatagacattgtatcagtgtaaatcttgagatagagcgggctgaaacaaggatttagaaag 6231446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 627
Target Start/End: Original strand, 38889856 - 38889936
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagc 627  Q
    ||||||| |||| ||||||||||| ||| |||||| ||||||||| |||||||  ||| ||||||||| || |||||||||    
T  38889856 gaaaaatcgtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttacagattttaagc 38889936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 661
Target Start/End: Original strand, 25388796 - 25388851
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcag 661  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||||||||||    
T  25388796 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcag 25388851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 629 - 705
Target Start/End: Original strand, 25533355 - 25533439
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaactt--------ggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| ||||||||||||||||||||||  |||||||         ||||||||||||||||||||||||||||| ||||    
T  25533355 atacttttactataaatatagaccttgtatcaggctaaactttgagagagagagatagagggggctgaaacaagggtttagaaag 25533439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 700
Target Start/End: Original strand, 38210266 - 38210362
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttg---gagatagagggggctgaaacaagggttta 700  Q
    ||||||||| || ||||||||| | |||||||| |||||||||| ||||||||||| |  |  |||   |||||||||||||||||||||||||||||    
T  38210266 agatttgttacagattttaagcaagacttttactataaatataggccttgtatcag-gctattttgagagagatagagggggctgaaacaagggttta 38210362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 629 - 705
Target Start/End: Original strand, 42992203 - 42992283
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttg----gagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| ||||||||| |||||||||||   |||||||     ||||||||||||||||||||||||||||| ||||    
T  42992203 atacttttactataaatatataccttgtatcatgctaaactttaagagagatagagggggctgaaacaagggtttaaaaag 42992283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 700
Target Start/End: Complemental strand, 1619018 - 1618920
Alignment:
Q  606 agatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaa-cttg-gagatagagggggctg-aaacaagggttta 700  Q
    ||||||||||||| ||| | || |||||||| || |||||||||||||||||| || |||||| |||| |||| ||||||||||| |||||||||||||    
T  1619018 agatttgttccaattttatgagggatactttgactataaatatagaccttgtaccatagtaaaccttgagagacagagggggctgaaaacaagggttta 1618920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 700
Target Start/End: Original strand, 39715392 - 39715461
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| | |||||||||||| ||||||||| |||||| | |||||||| |||||||||| |||||||||    
T  39715392 tacttttgctataaatatagacattgtatcagtgtaaaccttgagataga-ggggctgaaataagggttta 39715461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 680
Target Start/End: Complemental strand, 10621900 - 10621827
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  10621900 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagag 10621827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 268 - 313
Target Start/End: Original strand, 45748199 - 45748244
Alignment:
Q  268 gtttatgaagaagttgaatgctttcatattgtaatggaattgtgct 313  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||    
T  45748199 gtttatgaagaagctgaatgctttcatcttgtgatggaattgtgct 45748244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 47149233 - 47149155
Alignment:
Q  632 cttttacgataaatatagaccttgtatcaga-gtaaactt----ggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| ||||||||||||||||||||||| |||  | |    |||||||||||||||||||||||||||||| ||||    
T  47149233 cttttactataaatatagaccttgtatcagatgtaggccttgagggagatagagggggctgaaacaagggtttagaaag 47149155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 627
Target Start/End: Complemental strand, 6719551 - 6719471
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagc 627  Q
    ||||||| |||| ||||||||||| ||| |||||| ||||||||| |||||||  ||| ||||||| | || |||||||||    
T  6719551 gaaaaatcgtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgatacagattttaagc 6719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 676 - 720
Target Start/End: Original strand, 25633899 - 25633943
Alignment:
Q  676 tagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||    
T  25633899 tagagggggctgaaacaaggttttagaaatcaaactagggtttgt 25633943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 662
Target Start/End: Original strand, 26762863 - 26762919
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    ||||||||||||| |||| || ||| ||||||| ||||||||| |||||||||||||    
T  26762863 agatttgttccaattttttagggatgcttttactataaatataaaccttgtatcaga 26762919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 54016342 - 54016397
Alignment:
Q  153 agaaaccgattgtgaagaataaggttccgaagtttattcttgctcatatttaattt 208  Q
    |||||| |||| |||| ||||||||||| ||||||||||||  |||||||||||||    
T  54016342 agaaacagattatgaacaataaggttccaaagtttattcttcttcatatttaattt 54016397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 663 - 713
Target Start/End: Original strand, 17795225 - 17795275
Alignment:
Q  663 gtaaacttggagatagagggggctgaaacaagggtttataaagcaaactag 713  Q
    |||||| |||||||||| |||| ||||||||||||||| ||| ||||||||    
T  17795225 gtaaacctggagatagatggggttgaaacaagggtttagaaatcaaactag 17795275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 663 - 713
Target Start/End: Original strand, 19103665 - 19103715
Alignment:
Q  663 gtaaacttggagatagagggggctgaaacaagggtttataaagcaaactag 713  Q
    |||||| |||||||||| |||| ||||||||||||||| ||| ||||||||    
T  19103665 gtaaacctggagatagatggggttgaaacaagggtttagaaatcaaactag 19103715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 705
Target Start/End: Original strand, 30005805 - 30005838
Alignment:
Q  672 gagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||||||||||||||| ||||    
T  30005805 gagatagagggggctgaaacaagggtttagaaag 30005838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 680
Target Start/End: Original strand, 41849041 - 41849114
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||| |||||||||  ||||||| |||| ||||    
T  41849041 atttgttccaaatttatgagttatacttttactataaatatagacattgtatcaggctaaactttgagagagag 41849114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 42990181 - 42990234
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatca 660  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||||||||||||    
T  42990181 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatca 42990234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 705
Target Start/End: Original strand, 42990268 - 42990301
Alignment:
Q  672 gagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||||||||||||||| ||||    
T  42990268 gagatagagggggctgaaacaagggtttagaaag 42990301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 54691906 - 54691834
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||| | |||||||||||||||| |  |||||||||||| | |||||||| |||| ||||    
T  54691906 cttttactataaatataggctttgtatcagagtaaaccttaagatagaggggg-taaaacaaggttttagaaag 54691834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 3e-59; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 449 - 705
Target Start/End: Original strand, 4423835 - 4424091
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactaga 548  Q
    |||||||||||||||||||| | | | || || |||||||||||| |||  |||||||||| ||| |||||| |||| |||| | | | |||  ||| ||    
T  4423835 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacaattgctgggcaacgtggcacaattggaggtttcagttttaaggcaaggcactgga 4423934  T
Q  549 aaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatata 648  Q
    ||||| |||| ||||||||||| |||  |||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |    
T  4423935 aaaatcgtggcacgatggtgcgctggcagcgaaaaatagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaataca 4424034  T
Q  649 gaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| |||| ||||    
T  4424035 gaccttgtatcagagcaaactttgagatagagggggctgaaacaaggatttagaaag 4424091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 555 - 720
Target Start/End: Complemental strand, 2468510 - 2468345
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||| ||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  2468510 gtggcacgatggtgcgctggatgcgaataacagaaacgtattttttagtgcagatttgttccaaatgttaagcgatacttttactataaatatagacctt 2468411  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    |||||| ||||||||| ||||||||||| |||||||||||| |||| ||| ||||||| |||||||    
T  2468410 gtatcaaagtaaactttgagatagagggagctgaaacaaggatttagaaatcaaactacggtttgt 2468345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 27826909 - 27827059
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  |||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  27826909 gtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatataggcctt 27827008  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  27827009 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 27827059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 27829220 - 27829370
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  |||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  27829220 gtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatataggcctt 27829319  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  27829320 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 27829370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 28251978 - 28251834
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    ||||||||||||||||||||  ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28251978 gtggtacgatggtgcgttggcagcgaaaaacagaaacgtattttg-agtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 28251880  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||| ||||||||| ||||||||| ||| |||||||||||||||    
T  28251879 gtatcatagtaaactttgagatagagtgggttgaaacaagggttta 28251834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 562 - 705
Target Start/End: Original strand, 15072640 - 15072783
Alignment:
Q  562 gatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcag 661  Q
    ||||||||| |||  ||||| |||||||||||||||||  ||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15072640 gatggtgcgctggcagcgaataacagaaacgtatttttgggtgcaaatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcag 15072739  T
Q  662 agtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    | ||||||| ||||||||||||||||||||||||||||| ||||    
T  15072740 actaaactttgagatagagggggctgaaacaagggtttagaaag 15072783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 14807675 - 14807824
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||| ||||||| |||  |||||||||| |||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14807675 gtggcacggtggtgcgctggcagcgaaaaacataaacgtattttg-agtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 14807773  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  14807774 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 14807824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 547 - 705
Target Start/End: Complemental strand, 3886341 - 3886180
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttca---gtggagatttgttccaaattttaagcgatacttttacgataa 643  Q
    ||||||| |||||||||||||| | |||  ||||| ||||||||| |||||||     ||| | ||||||||||||||||||||||||||||||| ||||    
T  3886341 gaaaaatcgtggtacgatggtgtgctggcagcgaataacagaaacatattttttttgggtgcatatttgttccaaattttaagcgatacttttactataa 3886242  T
Q  644 atatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  3886241 atatagactttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 3886180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 15067904 - 15068054
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  15067904 gtggcacgatggtgcgctggcagcgaataacaaaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatataaacctt 15068003  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||   ||||||| |||||||| |||||||||||||||||||| ||||    
T  15068004 gtatcaacctaaactttgagatagaaggggctgaaacaagggtttagaaag 15068054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 12517438 - 12517286
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||| | |||  ||||||||||||||| ||||||| |||| | ||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  12517438 gtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaagcgatacttttactatatatatatacctt 12517339  T
Q  655 gtatcagagtaaactt--ggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||||   ||||||||||||||||||||||||||||| ||||    
T  12517338 gtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaaag 12517286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 606 - 705
Target Start/End: Original strand, 18810682 - 18810781
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||||||||| || |||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  18810682 agatttgttacaaattttaagggaaacttttactataaatatagatcttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 18810781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 606 - 705
Target Start/End: Original strand, 18812867 - 18812966
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||||||||| || |||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  18812867 agatttgttacaaattttaagggaaacttttactataaatatagatcttgtatcagagcaaacttggagatagaggaggctgaaacaagggtttagaaag 18812966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 606 - 705
Target Start/End: Original strand, 44720817 - 44720916
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||| ||||| || |||||| ||||||||||||||||||||||||||||| ||||    
T  44720817 agatttgttacagattttaagcaagacttttactataaatatagaccttatatcaaagcaaactttgagatagagggggctgaaacaagggtttagaaag 44720916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 606 - 720
Target Start/End: Original strand, 21482297 - 21482410
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||  |||| || ||| ||||||| |||||||||||  |||||||||||||||||| ||||||||| || |||||||||||||||| |||     
T  21482297 agatttgttccagttttttag-gattcttttactataaatatagaatttgtatcagagtaaactttgagatagagtggactgaaacaagggtttagaaat 21482395  T
Q  706 caaactagggtttgt 720  Q
    |||||||||||||||    
T  21482396 caaactagggtttgt 21482410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 609 - 705
Target Start/End: Complemental strand, 13858842 - 13858746
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||||||||||| |||||||||||| |||||||||||||||| | ||||||||||||| ||||||||||||||| ||||    
T  13858842 tttgttccaatttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggatgaaacaagggtttagaaag 13858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 609 - 705
Target Start/End: Complemental strand, 14419549 - 14419453
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||||||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  14419549 tttgttccaatttatgagtgatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 14419453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 696
Target Start/End: Original strand, 181534 - 181601
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaaggg 696  Q
    |||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  181534 atacttttactataaatatagactttgtatcagactaaactttgagatagagggggctgaaacaaggg 181601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 33541723 - 33541650
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  33541723 cttttactataaatatagacattgtatcagtgtaaacattgagatagagggggctgaaacaagggtttagaaag 33541650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 35872713 - 35872640
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  35872713 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 35872640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 1225164 - 1225239
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||| | ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  1225164 tacttttactataaatataggcattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 1225239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 26775199 - 26775274
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||| | ||||||||||| |||| | ||||||||||||||||||||||||||||| ||||    
T  26775199 tacttttactataaatataggctttgtatcagagcaaaccttgagatagagggggctgaaacaagggtttagaaag 26775274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 41382670 - 41382741
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| |||||||||||| | |||||||| |||||| |||||||||||||    
T  41382670 atacttttactataaatatagaccttgaatcagagtaaaccttgagatagatggggctaaaacaagggttta 41382741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 585 - 686
Target Start/End: Original strand, 31162165 - 31162267
Alignment:
Q  585 cagaaacgtatttttcagtggagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggg 683  Q
    ||||||| ||||||| ||  |||||||||||||| ||| | || ||||||||||| ||||||||||||||||||||| ||||||| | |||| |||||||    
T  31162165 cagaaacatatttttgagctgagatttgttccaattttatgagggatacttttactataaatatagaccttgtatcatagtaaaccttgagaaagagggg 31162264  T
Q  684 gct 686  Q
    |||    
T  31162265 gct 31162267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 43530121 - 43530196
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||||||||||| ||||||     |||||||||||||||||||||||||||||    
T  43530121 atacttttactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggttta 43530196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 581 - 705
Target Start/End: Complemental strand, 15186097 - 15185972
Alignment:
Q  581 aaaacagaaacgtatttttcagtggagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagataga 679  Q
    ||||||||||||||||||   |   ||||||||||||| ||| | || ||||||||||| ||||||||| || |||||||||||||||| | |||||| |    
T  15186097 aaaacagaaacgtattttcgggcctagatttgttccaattttatgagggatacttttactataaatataaactttgtatcagagtaaaccttgagataaa 15185998  T
Q  680 gggggctgaaacaagggtttataaag 705  Q
    || | |||||||||||||||| ||||    
T  15185997 ggtgactgaaacaagggtttagaaag 15185972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 27107232 - 27107159
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||||||  ||||| | ||||||||||||||||||||||||||||| ||||    
T  27107232 cttttactataaatatagacattgtatcagtataaaccttgagatagagggggctgaaacaagggtttagaaag 27107159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 32339280 - 32339382
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     ||||||||||||||||||||||||||||| |    
T  32339280 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttaga 32339379  T
Q  703 aag 705  Q
    |||    
T  32339380 aag 32339382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 705
Target Start/End: Complemental strand, 5623096 - 5623000
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||| ||||||| ||||||||||   |||||||||| ||||| | ||||||||||||||||||||||||||||| ||||    
T  5623096 tttgttccaatttatgagtgattcttttactataaatataggttttgtatcagaataaaccttgagatagagggggctgaaacaagggtttagaaag 5623000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 606 - 662
Target Start/End: Original strand, 17847502 - 17847558
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  17847502 agatttgttccaaattttgagggatacttttactataaatatagaccttgtatcaga 17847558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 628 - 700
Target Start/End: Original strand, 27911011 - 27911083
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||| |||||||| ||| ||||||||  |||||| | |||||||||||||||||||||||||||||    
T  27911011 gatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggttta 27911083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 628 - 700
Target Start/End: Original strand, 27957430 - 27957502
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||| |||||||| ||| ||||||||  |||||| | |||||||||||||||||||||||||||||    
T  27957430 gatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggttta 27957502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 14477276 - 14477349
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||| | ||||||||||| |||| | ||||||||||||| ||||||||||||||| ||||    
T  14477276 cttttactataaatataggctttgtatcagagcaaaccttgagatagagggggttgaaacaagggtttagaaag 14477349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 15809190 - 15809292
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     |||||| |||||||||||||||||||||| |    
T  15809190 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagataaagggggctgaaacaagggtttaga 15809289  T
Q  703 aag 705  Q
    |||    
T  15809290 aag 15809292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 24873547 - 24873443
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt------ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||       |||||||||||||||||||||||||||||    
T  24873547 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggttta 24873448  T
Q  701 taaag 705  Q
     ||||    
T  24873447 gaaag 24873443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 25952521 - 25952594
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||  | ||||||||||| |||| | ||||||||||||||||||||||||||||| ||||    
T  25952521 cttttactataaatataagctttgtatcagaggaaaccttgagatagagggggctgaaacaagggtttagaaag 25952594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 633 - 705
Target Start/End: Original strand, 36865538 - 36865611
Alignment:
Q  633 ttttacgataaatatagaccttgtatcaga-gtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| |||||||||||| |||||||||| |||||| |  |||||||||||||||||||||||||||| ||||    
T  36865538 ttttactataaatatagacattgtatcagatgtaaaccttaagatagagggggctgaaacaagggtttagaaag 36865611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 660 - 720
Target Start/End: Original strand, 21480542 - 21480602
Alignment:
Q  660 agagtaaacttggagatagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    ||||||||| | |||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  21480542 agagtaaaccttgagatagatggggctgaaacaagggtttagaaatcaaactagggtttgt 21480602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 700
Target Start/End: Complemental strand, 28283585 - 28283486
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt------ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||       |||||||||||||||||||||||||||||    
T  28283585 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggttta 28283486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 41384742 - 41384812
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| |||| ||||||  | |||||||| ||||||||||||||||||||    
T  41384742 atacttttactataaatatagaccttgaatcaaagtaaaaattgagataga-ggggctgaaacaagggttta 41384812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 3873981 - 3874083
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||| |||||||||  |||||||     ||||||| ||||||||||||||||||||| |    
T  3873981 atttgttccaaatttatgagttatacttttactataaatatagactttgtatcaggctaaactttgagagagatagcgggggctgaaacaagggtttaga 3874080  T
Q  703 aag 705  Q
    |||    
T  3874081 aag 3874083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 30480838 - 30480765
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||| || |||||| | |||||||| |||| ||||||||||||||| ||||    
T  30480838 cttttactataaatatagacattgtattagtgtaaaccttgagatagaaggggttgaaacaagggtttagaaag 30480765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 668
Target Start/End: Original strand, 6375985 - 6376025
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaac 668  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  6375985 gatacttttactataaatatagaccttgtatcagagtaaac 6376025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 675
Target Start/End: Original strand, 31035042 - 31035111
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga-gtaaacttggaga 675  Q
    ||||||||||||| |||| || |||| |||||| ||||||||||||||||||||||| |||||||| ||||    
T  31035042 agatttgttccaattttttag-gatatttttactataaatatagaccttgtatcagatgtaaactttgaga 31035111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 5372512 - 5372440
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||| ||||||| ||||||||| |||||  | |||||||| |||||||||||||||||||| ||||    
T  5372512 cttttactataattatagacattgtatcagtgtaaatcttgagataga-ggggctgaaacaagggtttagaaag 5372440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 630 - 680
Target Start/End: Complemental strand, 22685003 - 22684953
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    |||||| || |||||||||||||||||||||||| |||||| |||| ||||    
T  22685003 tactttcactataaatatagaccttgtatcagagcaaactttgagagagag 22684953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 663 - 705
Target Start/End: Complemental strand, 37214514 - 37214472
Alignment:
Q  663 gtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| | ||||||||||||||||||||||||||||| ||||    
T  37214514 gtaaaccttgagatagagggggctgaaacaagggtttagaaag 37214472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 8e-57; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 449 - 705
Target Start/End: Original strand, 32279794 - 32280048
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactaga 548  Q
    |||||||||||||||||||| | ||| || || || |||| |||  |||| |||||||||| ||||||||||||||| |||| ||| | ||||  || ||    
T  32279794 tgtgagagttaacttaaaatca-gttctgcaggaaacgtgacacgattgttgggcaacgtggcacgattggatgtttcagttctgaggcaagtcgctgga 32279892  T
Q  549 aaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatata 648  Q
    ||| | |||| ||||||||||| ||| |||||| |||| ||| |||||||| |||| ||||||||||||||||||||||||||||||| | ||| |||||    
T  32279893 aaagtcgtggcacgatggtgcgctggcggcgaataacataaatgtatttttgagtgcagatttgttccaaattttaagcgatacttttcctatatatata 32279992  T
Q  649 gaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||    
T  32279993 gaccttgtatcatagtaaacttggagataga-ggggctgaaacaagggtttaaaaag 32280048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 449 - 705
Target Start/End: Complemental strand, 1072395 - 1072139
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactaga 548  Q
    |||||||||||||||||||| | ||| || ||||||||||| ||  | || |||||||||| |||||||||| |||| |||| ||| | |||| | | ||    
T  1072395 tgtgagagttaacttaaaatcaggttctgcagaaatcgtggtacgatggttgggcaacgtggcacgattggaggtttaagttttgaggcaagtcattgga 1072296  T
Q  549 aaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatata 648  Q
        | |||| |||||||| ||| ||  ||||| |||| ||||||||||||  ||| |||||||||||||||||||||| |||||||||| |||||||||    
T  1072295 tttttcgtggcacgatggtacgtaggcagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcaatacttttactataaatata 1072196  T
Q  649 gaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||| |||||||||||||||||| |||||||| || ||||||||||||||||| ||||    
T  1072195 gacattgtatcagagtaaactttgagatagaaggagctgaaacaagggtttagaaag 1072139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 14507587 - 14507437
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||   ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14507587 gtggcacgatggtgcgctgccagcgaaaaacagaaacatatttttgagtgtagatttgttccaaattttaagcgatacttttactataaatatagacctt 14507488  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||| |||| |||||| ||||||||||||||| ||||||||||||| ||||    
T  14507487 gtattagagcaaactttgagatagagggggctaaaacaagggtttagaaag 14507437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 555 - 693
Target Start/End: Complemental strand, 11983441 - 11983303
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||| |||||||||| ||| |||||||| |||||||||||||||    
T  11983441 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgtttcaaattttaaacgaaacttttactataaatatagacctt 11983342  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaa 693  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  11983341 gtatcagagcaaacttggagatagagggggctgaaacaa 11983303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 555 - 697
Target Start/End: Complemental strand, 30729240 - 30729098
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||| ||||| |||  ||||| |||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||| ||||||||||| |||    
T  30729240 gtggcacgatagtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcggtacttttactataaatatagatctt 30729141  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggt 697  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  30729140 gtatcagagtaaaccttgagatagagggggctgaaacaagggt 30729098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 586 - 705
Target Start/End: Complemental strand, 15533062 - 15532943
Alignment:
Q  586 agaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggc 685  Q
    |||||| |||||||  ||| |||||||||||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  15533062 agaaacatatttttaggtgcagatttgttccaaattttaagttatacttttactataaatatagaccttgtatcagactaaactttgagatagagggggc 15532963  T
Q  686 tgaaacaagggtttataaag 705  Q
    ||||||||||||||| ||||    
T  15532962 tgaaacaagggtttagaaag 15532943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 583 - 705
Target Start/End: Original strand, 8995410 - 8995531
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagaggg 682  Q
    ||||||||||||||||   ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||    
T  8995410 aacagaaacgtattttgg-gtgcagatttgttccaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaactgagagatagaggg 8995508  T
Q  683 ggctgaaacaagggtttataaag 705  Q
    |||| ||||||||||||| ||||    
T  8995509 ggctaaaacaagggtttagaaag 8995531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 583 - 705
Target Start/End: Original strand, 9019857 - 9019978
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagaggg 682  Q
    ||||||||||||||||   ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||    
T  9019857 aacagaaacgtattttgg-gtgcagatttgttccaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaactgagagatagaggg 9019955  T
Q  683 ggctgaaacaagggtttataaag 705  Q
    |||| ||||||||||||| ||||    
T  9019956 ggctaaaacaagggtttagaaag 9019978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 586 - 696
Target Start/End: Complemental strand, 15530503 - 15530393
Alignment:
Q  586 agaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggc 685  Q
    |||||| |||||||  ||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  15530503 agaaacatatttttgggtgcaggtttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaactgggagatagagggggc 15530404  T
Q  686 tgaaacaaggg 696  Q
    |||| ||||||    
T  15530403 tgaagcaaggg 15530393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 15541552 - 15541402
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| |||||||| || |||  ||||| | ||||||| |||||||  ||| |||||||||||||||||||||  | |||||||| |||||||||||||||    
T  15541552 gtggcacgatggtacgctggcagcgaatagcagaaacatatttttaggtgcagatttgttccaaattttaagttacacttttactataaatatagacctt 15541453  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  15541452 gtatcagactaaactttgagatagagggggctgaaacaagggtttagaaag 15541402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 19227821 - 19227670
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcag-tggagatttgttccaaattttaagcgatacttttacgataaatatagacct 653  Q
    |||| ||||||||||| ||| |||||| ||||||||| |||||||  | || ||||||||||||||||||||| || |||||||| ||||||||||| ||    
T  19227821 gtggcacgatggtgcgctggcggcgaataacagaaacatattttttgggtgcagatttgttccaaattttaagggaaacttttactataaatatagatct 19227722  T
Q  654 tgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| |||||| |||||| |||||||| ||||||||||||| ||||    
T  19227721 tgtatcagagcaaactttgagataaagggggctcaaacaagggtttagaaag 19227670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 583 - 720
Target Start/End: Original strand, 15346320 - 15346458
Alignment:
Q  583 aacagaaacgtatttttcagtggagattt-gttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagg 681  Q
    ||||||||||||||||| ||  ||||||| ||||||| || | || ||||||||||| |||||||||||| ||||||||| |||||| | ||||||||||    
T  15346320 aacagaaacgtatttttgagctgagattttgttccaatttatgagggatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagg 15346419  T
Q  682 gggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    |||||||| |||||||||| ||  |||||||||||||||    
T  15346420 gggctgaaccaagggtttagaattcaaactagggtttgt 15346458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 608 - 700
Target Start/End: Complemental strand, 12195875 - 12195782
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  12195875 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggttta 12195782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 28241658 - 28241583
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  28241658 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaaag 28241583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 17852518 - 17852589
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||| ||| |||||||||||| | |||||||||||||||||||||||||||||    
T  17852518 atacttttactataaatatagactttgaatcagagtaaaccttgagatagagggggctgaaacaagggttta 17852589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 13057173 - 13057246
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  13057173 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 13057246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 14459092 - 14459027
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||    
T  14459092 ataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaataagggtttagaaag 14459027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 24338783 - 24338710
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  24338783 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 24338710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 32447651 - 32447578
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  32447651 cttttactataaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaag 32447578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 606 - 705
Target Start/End: Complemental strand, 20915719 - 20915618
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttg---gagatagagggggctgaaacaagggtttata 702  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||||||||||  |||| |||   ||||||||||||||||||||||||||||| |    
T  20915719 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaggctaaa-ttgagagagatagagggggctgaaacaagggtttaga 20915621  T
Q  703 aag 705  Q
    |||    
T  20915620 aag 20915618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 628 - 705
Target Start/End: Original strand, 3390354 - 3390431
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||| |||||||||||| |||||||||  ||||| | |||||||| |||||||||||||||||||| ||||    
T  3390354 gatacttttactataaatatagacattgtatcagtataaaccttgagatagacggggctgaaacaagggtttagaaag 3390431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 25477253 - 25477326
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||  ||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  25477253 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 25477326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 1230586 - 1230511
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || ||||||||||||||||||||| || |||||| ||||||||| ||| ||||||||||||||| ||||    
T  1230586 tactttcactataaatatagaccttgtatcatagcaaactttgagatagagagggttgaaacaagggtttagaaag 1230511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 605 - 700
Target Start/End: Complemental strand, 12186432 - 12186334
Alignment:
Q  605 gagatttgttccaaattttaagcgat-acttttacgataaatatagaccttgtatcaga-gtaaacttggagatagagggggctg-aaacaagggttta 700  Q
    |||||||||||||| |||| |||||| |||||||| ||||||||| ||||||||||| | |||||| | |||||||| ||||||| |||||||||||||    
T  12186432 gagatttgttccaattttttagcgattacttttactataaatataaaccttgtatcacatgtaaaccttgagatagaaggggctgaaaacaagggttta 12186334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 672 - 720
Target Start/End: Original strand, 15719673 - 15719721
Alignment:
Q  672 gagatagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  15719673 gagatagagggggctgaaacaagggtttagaaatcaaactagggtttgt 15719721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 3632271 - 3632200
Alignment:
Q  634 tttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||| |||||||||||| ||||||||| |||||| | ||||||||||| | ||||||||||||||| ||||    
T  3632271 tttactataaatatagacattgtatcagtgtaaaccttgagatagagggagttgaaacaagggtttagaaag 3632200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 632 - 699
Target Start/End: Original strand, 22490618 - 22490685
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttt 699  Q
    ||||||| |||||||||||| ||| || || |||||| | ||||||||||||||||||||||||||||    
T  22490618 cttttaccataaatatagacattgaattagtgtaaaccttgagatagagggggctgaaacaagggttt 22490685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 680
Target Start/End: Complemental strand, 4816606 - 4816532
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  4816606 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaggctaaactttgagagagag 4816532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 554 - 632
Target Start/End: Complemental strand, 24191611 - 24191533
Alignment:
Q  554 tgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatac 632  Q
    ||||||| ||||| ||| |||  ||||| ||||||||| |||||||||||| | |||||||||||||||||||| ||||    
T  24191611 tgtggtatgatggggcgctggcagcgaataacagaaacatatttttcagtgcaaatttgttccaaattttaagcaatac 24191533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 3234065 - 3233993
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| |  ||||||||||||||||||||||| |||| ||||    
T  3234065 cttttactataaatatagac-ttgtatcagtgtaaaccttaagatagagggggctgaaacaaggatttagaaag 3233993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 13039733 - 13039806
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||  ||||||||| |||||| | |||||| ||| |||||||||||||||||| ||||    
T  13039733 cttttactataaatatagatattgtatcagtgtaaaccttgagatataggaggctgaaacaagggtttagaaag 13039806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 30034967 - 30034865
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     ||||||||||| ||| ||||||||||||| |    
T  30034967 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttaagagagatagagggagctaaaacaagggtttaga 30034868  T
Q  703 aag 705  Q
    |||    
T  30034867 aag 30034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 30967152 - 30967253
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga----tagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||| ||  ||||||| ||||    ||||||||||||||||||||||||| |    
T  30967152 atttgttccaaatttatgagttatacttttactataaatatagaccttgtat-aggctaaactttgagagagatagagggggctgaaacaagggtttaga 30967250  T
Q  703 aag 705  Q
    |||    
T  30967251 aag 30967253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 699
Target Start/End: Complemental strand, 3028189 - 3028117
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctg-aaacaagggttt 699  Q
    ||||||||||| ||||||||||||||||||||| |||||||   |||||| | ||||||| ||||||||||||    
T  3028189 gatacttttactataaatatagaccttgtatcaaagtaaaccatgagataaaaggggctgaaaacaagggttt 3028117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 609 - 720
Target Start/End: Original strand, 15366992 - 15367110
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga-------gtaaacttggagatagagggggctgaaacaagggtttat 701  Q
    |||||||||| || | || ||||||||||| |||||||||||| ||||||||||       |||||| | |||||||||||||||||| |||||| ||||    
T  15366992 tttgttccaatttatgagggatacttttactataaatatagacattgtatcagacatcggtgtaaaccttgagatagagggggctgaaccaagggcttat 15367091  T
Q  702 aaagcaaactagggtttgt 720  Q
    ||  |||| ||||| ||||    
T  15367092 aattcaaattaggggttgt 15367110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 2629250 - 2629147
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag-----ggggctgaaacaagggtttat 701  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||||||||||||   ||||||| |||| ||||     ||||||||||||||||||||     
T  2629250 atttgttccaaatttattagttatacttttactataaatatagaccttgtatcatgttaaactttgagagagagatagaggggctgaaacaagggtttag 2629151  T
Q  702 aaag 705  Q
    ||||    
T  2629150 aaag 2629147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 577 - 632
Target Start/End: Complemental strand, 24192685 - 24192630
Alignment:
Q  577 gcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatac 632  Q
    ||||| ||||||||| |||||||||||| | |||||||||||||||||||| ||||    
T  24192685 gcgaataacagaaacatatttttcagtgcaaatttgttccaaattttaagcaatac 24192630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 676
Target Start/End: Complemental strand, 26066389 - 26066319
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagat 676  Q
    ||||||||| || |||||||||   |||||||| ||||||||||||||||||||| || |||||| |||||    
T  26066389 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagat 26066319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 676
Target Start/End: Complemental strand, 26068660 - 26068590
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagat 676  Q
    ||||||||| || |||||||||   |||||||| ||||||||||||||||||||| || |||||| |||||    
T  26068660 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagat 26068590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 3630199 - 3630126
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||  |||||  | |||||||||||||||||||||  |||||| ||||    
T  3630199 cttttactataaatatagacattgtatcaatgtaaaacttgagatagagggggctgaaacatcggtttagaaag 3630126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 640 - 689
Target Start/End: Original strand, 17012031 - 17012080
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaa 689  Q
    |||||||||||||||||||| |||||||| | |||||||||||| |||||    
T  17012031 ataaatatagaccttgtatcggagtaaaccttgagatagaggggtctgaa 17012080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 578 - 658
Target Start/End: Complemental strand, 24543067 - 24542987
Alignment:
Q  578 cgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtat 658  Q
    ||||||||| ||||||||||||||  |  ||||||||| ||||||| || ||| ||| ||| |||||||||||| ||||||    
T  24543067 cgaaaaacataaacgtatttttcaacgtggatttgttcaaaattttgagggatgcttgtactataaatatagacgttgtat 24542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 700
Target Start/End: Complemental strand, 12937559 - 12937461
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataa--atatagaccttgtatcaga-gtaaacttggagatagag-ggggctgaaacaagggttta 700  Q
    |||||| ||||||||||| || ||||||||||| ||||  |||||||| |||||||||| |||||| | |||||| || ||||||||||  ||||||||    
T  12937559 agatttattccaaatttttagggatacttttactataaatatatagacattgtatcagatgtaaaccttgagatacagaggggctgaaaacagggttta 12937461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 668
Target Start/End: Complemental strand, 16455785 - 16455723
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaac 668  Q
    ||||||||||||| |||| || ||||| ||||| ||||||||| |||||||||| | ||||||    
T  16455785 agatttgttccaatttttcagggatacctttactataaatatataccttgtatcggtgtaaac 16455723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 13870748 - 13870684
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| | ||||||||||| |||| | |||||||| |||||||||| ||||||||| ||||    
T  13870748 ataaatataggctttgtatcagagcaaaccttgagataga-ggggctgaaataagggtttagaaag 13870684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 658
Target Start/End: Original strand, 19696393 - 19696446
Alignment:
Q  605 gagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtat 658  Q
    |||||||||||||| |||| |  ||| ||||||| |||||||||||||||||||    
T  19696393 gagatttgttccaatttttgaaggattcttttactataaatatagaccttgtat 19696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 1e-55; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 547 - 705
Target Start/End: Original strand, 11434868 - 11435026
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaata 646  Q
    ||||||| |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||||| |||||||    
T  11434868 gaaaaatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgaaacttttactataaata 11434967  T
Q  647 tagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  11434968 tagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 11435026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 482 - 700
Target Start/End: Complemental strand, 22801346 - 22801129
Alignment:
Q  482 aatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactagaaaaattgtggtacgatggtgcgttggaggcgaa 581  Q
    |||||||||||  | || |||||||||| |||||||||| |||| |||| ||| | ||| |||| ||||||| |||| |||||||||||  ||  || ||    
T  22801346 aatcgtggcacgatggttgggcaacgtgacacgattggaggtttcagttttgaggcaaggaactggaaaaatcgtggcacgatggtgcgccggcagcaaa 22801247  T
Q  582 aaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagg 681  Q
     ||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  22801246 taacagaaacgtattttg-agtgcagatttgtttcaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaactttgagatagagg 22801148  T
Q  682 gggctgaaacaagggttta 700  Q
    |||||||||||||||||||    
T  22801147 gggctgaaacaagggttta 22801129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 5198341 - 5198491
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5198341 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 5198440  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  5198441 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 5198491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 51015167 - 51015317
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  51015167 gtggcacgatggtgcgctggcagcgaataacagaaacatatttttcagtgcagatttgttccaaattttaagcgatacttttactataaatatagacttt 51015266  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  51015267 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 51015317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 554 - 700
Target Start/End: Original strand, 48486239 - 48486385
Alignment:
Q  554 tgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacct 653  Q
    ||||| || |||||||| |||  ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48486239 tgtggcacaatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacct 48486338  T
Q  654 tgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  48486339 tgtatcagagtaaactttgagatagagggggctgaaacaagggttta 48486385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 705
Target Start/End: Complemental strand, 619851 - 619709
Alignment:
Q  563 atggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    |||||||| ||| |||||| ||||||||| |||||||  || ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  619851 atggtgcgctggcggcgaataacagaaacatatttttgggtagagattttttccaaattttaaacgatacttttactataaatatagaccttgtatcaga 619752  T
Q  663 gtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  619751 gtaaactttgagatagagggggctgaaacaagggtttataaag 619709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 24888717 - 24888867
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||| | |||  ||||||||||||||| ||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  24888717 gtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcaatacttttactataaatatagacctt 24888816  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  24888817 gtatcagagcaaacttagagatagagggggctgaaacaagggtttagaaag 24888867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 22803145 - 22803001
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |||| |||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22803145 gtggcacgatggtgcgctggcagcgaataacaaaaacgtattttg-agtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 22803047  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  22803046 gtatcagagtaaactttgagatagagggggctgaaacaagggttta 22803001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 38409120 - 38409276
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38409120 gtggcacgatggtgcgttggcggcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 38409219  T
Q  655 gtatcagagtaaactt------ggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||||      ||||||||||||||||||||||| |||||| ||||    
T  38409220 gtatcagagcaaactttgagagggagatagagggggctgaaacaatggtttaaaaag 38409276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 579 - 705
Target Start/End: Complemental strand, 22044777 - 22044652
Alignment:
Q  579 gaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatag 678  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  22044777 gaaaaacagaaacatattttt-agtgcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatcagagcaaacttggagatag 22044679  T
Q  679 agggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||||||| ||||    
T  22044678 agggggctgaaacaagggtttagaaag 22044652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 31850011 - 31849861
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| | ||||||||  |||    
T  31850011 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactagaaatataggtctt 31849912  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  31849911 gtatcagagcaaactaggagatagagggggctgaaacaagggtttagaaag 31849861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 588 - 705
Target Start/End: Complemental strand, 40091794 - 40091677
Alignment:
Q  588 aaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctg 687  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  40091794 aaacgtatttttcagtgcatatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcaaagtaaactttgagatagagggggctg 40091695  T
Q  688 aaacaagggtttataaag 705  Q
    ||||||||||||| ||||    
T  40091694 aaacaagggtttagaaag 40091677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 578 - 705
Target Start/End: Original strand, 24878933 - 24879060
Alignment:
Q  578 cgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagata 677  Q
    |||| |||||||||||||||||  ||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  24878933 cgaataacagaaacgtatttttgggtgcatatttgttccaaattttaagcgatacttttactataaatatagaccttgtatccgagtaaacttggagata 24879032  T
Q  678 gagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||| |||||||| ||||    
T  24879033 gagggggctgaaactagggtttagaaag 24879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 579 - 705
Target Start/End: Complemental strand, 22047072 - 22046947
Alignment:
Q  579 gaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatag 678  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||||||||    
T  22047072 gaaaaacagaaacatattttt-agtgcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatcggagcaaacttggagatag 22046974  T
Q  679 agggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||||||| ||||    
T  22046973 agggggctgaaacaagggtttagaaag 22046947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 24880372 - 24880522
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |||||||||||||||||   || ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24880372 gtggcacgatggtgcgctggcagcgaataacagaaacgtatttttggatgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 24880471  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||| |||||||||||||||||||||||||  |||| |||||||| ||||    
T  24880472 gtatcggagtaaacttggagatagagggggcgtaaactagggtttagaaag 24880522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 47274648 - 47274798
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |||| ||||||||||||  ||| ||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  47274648 gtggcacgatggtgcgatggcagcgaataacataaacgtatttttgggtgcagatttgtttcaaattttaagcaatacttttactataaatatagacctt 47274747  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  47274748 gtatcagactaaactttgagatagagggggctgaaacaagggtttagaaag 47274798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 37089786 - 37089638
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| |||||||||||||||||  ||| |||||||||||||||||||||| | |||||||| |||||||||||||||    
T  37089786 gtggcacgatggtgcgctggcggcgaataacagaaacgtatttttaggtgcagatttgttccaaattttaagcaaaacttttactataaatatagacctt 37089687  T
Q  655 gtatcagagtaaacttg---gagatagagggggctgaaacaagggttta 700  Q
    |||||||  ||||||||   |||||||||||||||||||||||||||||    
T  37089686 gtatcaggctaaacttgagagagatagagggggctgaaacaagggttta 37089638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 547 - 705
Target Start/End: Original strand, 7941232 - 7941392
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaata 646  Q
    ||||||| |||| ||||||||||| ||| | |||| |||||||||||||||||  ||| |||||||||||||||||||||||| |||||||| |||||||    
T  7941232 gaaaaatggtggcacgatggtgcgctggtgacgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaata 7941331  T
Q  647 tagaccttgtatcagagtaaacttg--gagatagagggggctgaaacaagggtttataaag 705  Q
    ||||| ||||||||||| ||||  |  ||||||||||||||||||||||||||||| ||||    
T  7941332 tagacgttgtatcagagcaaaccgggagagatagagggggctgaaacaagggtttagaaag 7941392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 36919999 - 36919847
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |  ||||||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36919999 gtggcacgatggtgcgctggcagcgaatagtagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 36919900  T
Q  655 gtatcagagtaaacttgg--agatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||| |  ||||| |||||||||||||||||||||| ||||    
T  36919899 gtatcagagtaaactttgatagatatagggggctgaaacaagggtttagaaag 36919847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 552 - 705
Target Start/End: Complemental strand, 36921910 - 36921756
Alignment:
Q  552 attgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagac 651  Q
    ||||||| |||||||||| ||||  ||||| |||||||||||||||||   || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  36921910 attgtggcacgatggtgcattggcagcgaataacagaaacgtatttttggatgcagatttgttccaaattttaagcgatacttttacaataaatatagac 36921811  T
Q  652 cttgtatcagagtaaactt--ggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||||   ||||||||||||| ||||||||||| ||| ||||    
T  36921810 cttgtatcagagtaaactttgagagatagaggggg-tgaaacaagggcttagaaag 36921756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 564 - 700
Target Start/End: Complemental strand, 8756653 - 8756516
Alignment:
Q  564 tggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagag 663  Q
    ||||||| |||||||||| ||||||||| ||||| || ||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  8756653 tggtgcgctggaggcgaataacagaaacatatttctcggtgcagatttgttccaaattataaacgatacttttactataaatatagaccttgtatcagag 8756554  T
Q  664 taaacttggagatagagggggctg-aaacaagggttta 700  Q
    ||||| | |||||||| ||||||| |||||||||||||    
T  8756553 taaaccttgagatagaaggggctgaaaacaagggttta 8756516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 9174558 - 9174413
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  | ||||||||||||| |||||||  ||| ||||||||| ||  |||||||| | |||||||| |||||||||||||||    
T  9174558 gtggcacgatggtgcgctggcagggaaaaacagaaacatatttttgggtgcagatttgttacagtttttaagcaagacttttactataaatatagacctt 9174459  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  9174458 gtatcaaagcaaacttggagatagagggggctgaaacaagggttta 9174413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 555 - 665
Target Start/End: Complemental strand, 3824985 - 3824875
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||||||| | |||| |||||||||||||||||  ||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  3824985 gtggcacgatggtgcgttggcgacgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcaatacttttactataaatatagacctt 3824886  T
Q  655 gtatcagagta 665  Q
    |||||||||||    
T  3824885 gtatcagagta 3824875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 577 - 705
Target Start/End: Complemental strand, 5637858 - 5637727
Alignment:
Q  577 gcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaactt----gg 672  Q
    ||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||     |    
T  5637858 gcgaaaaacagaaacgtattttgg-gtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtataagagcaaactttgagag 5637760  T
Q  673 agatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||||||| ||||| ||||    
T  5637759 agatagagggggctgaaacaagagtttagaaag 5637727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 583 - 705
Target Start/End: Original strand, 9148201 - 9148324
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaactt--ggagatagag 680  Q
    ||||||||||||||||   ||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||   |||||||||    
T  9148201 aacagaaacgtattttgg-gtgcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatcagagcaaactttgagagatagag 9148299  T
Q  681 ggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||| ||||    
T  9148300 ggggctgaagcaagggtttagaaag 9148324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 52942859 - 52942708
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| |||||| |||| |||  ||||| |||| |||| |||||||  ||| |||||||||||||||||||||  ||||||| || |||||||||||||||    
T  52942859 gtggcacgatgatgcgctggcagcgaataacataaacatattttttggtgcagatttgttccaaattttaagtaatactttcactataaatatagacctt 52942760  T
Q  655 g--tatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |  ||||||| ||||||| |||||||| |||||||||||||||||||| ||||    
T  52942759 gtatatcagactaaactttgagataga-ggggctgaaacaagggtttagaaag 52942708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 40637070 - 40637145
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  40637070 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 40637145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 606 - 700
Target Start/End: Complemental strand, 9176835 - 9176741
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| ||  |||||||| | || ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  9176835 agatttgttacagtttttaagcaagacatttactataaatatagaccttgtatcaaagcaaacttggagatagagggggctgaaacaagggttta 9176741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 11006653 - 11006499
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  || |||||||||||| |||||||  ||| ||||||||| || ||||||||| | |||||||| |||||||||||||||    
T  11006653 gtggcacgatggtgcgctggcagcaaaaaacagaaacatatttttgggtgcagatttgttacagattttaagcaagacttttactataaatatagacctt 11006554  T
Q  655 gtatcagagtaaacttg-----gagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| | |  |||     ||||||||||||||||||||||||||||| ||||    
T  11006553 gtatcagact-attttgagagagagatagagggggctgaaacaagggtttagaaag 11006499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 606 - 705
Target Start/End: Original strand, 18847125 - 18847224
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||||||||| |  |||||| ||||||||||||| ||||||||||||||| ||||    
T  18847125 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaaacaaactttgagatagagggggttgaaacaagggtttagaaag 18847224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 606 - 700
Target Start/End: Complemental strand, 16934504 - 16934410
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| || |||||||||   |||||||| ||||||||||||||||||||| || |||||| ||||||||||||||||| |||||||||||    
T  16934504 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgatacaagggttta 16934410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 575 - 668
Target Start/End: Complemental strand, 40999339 - 40999246
Alignment:
Q  575 aggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaac 668  Q
    ||||||||||||||||||||| ||||||   ||||||||||||||||||||| | || |||||| ||||||||| ||||| |||||||||||||    
T  40999339 aggcgaaaaacagaaacgtatctttcaggatagatttgttccaaattttaagggttatttttactataaatataaaccttatatcagagtaaac 40999246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 6764835 - 6764910
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||    
T  6764835 tactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaaag 6764910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 44600176 - 44600105
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| ||||||||||||||||||| | || |||||| |||||||||||||||||||||||||||||    
T  44600176 atacttttactataaatatagaccttgtattaaagcaaactttgagatagagggggctgaaacaagggttta 44600105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 47868397 - 47868472
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||    
T  47868397 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagagggctgaaagaagggtttagaaag 47868472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 606 - 700
Target Start/End: Complemental strand, 16932150 - 16932056
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| || |||||||||   |||||||| ||||||||| ||||||||||| || |||||| ||||||||||||||||| |||||||||||    
T  16932150 agatttgttacagattttaagcaggacttttactataaatataaaccttgtatcaaagcaaactttgagatagagggggctgatacaagggttta 16932056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 17662598 - 17662496
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||||||||||||||| ||||||     ||||||||||||||||||||||||||||| |    
T  17662598 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttaga 17662499  T
Q  703 aag 705  Q
    |||    
T  17662498 aag 17662496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 24446914 - 24446841
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  24446914 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 24446841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 605 - 700
Target Start/End: Complemental strand, 15032899 - 15032803
Alignment:
Q  605 gagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||| ||| | || ||||||||||| |||||||||||| | ||| |||||||||| | |||||| ||||||||||||||||||||||    
T  15032899 gagatttgttccaattttatgagggatacttttactataaatatagacttggtaccagagtaaaccttgagataaagggggctgaaacaagggttta 15032803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 609 - 700
Target Start/End: Complemental strand, 18537829 - 18537737
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctg-aaacaagggttta 700  Q
    |||||||||| || | || ||| ||||||| ||||||||||| ||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  18537829 tttgttccaatttatgagtgatgcttttactataaatatagatcttgtatcagagtaaacattgagatagagggggctgaaaacaagggttta 18537737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 632 - 700
Target Start/End: Original strand, 19095880 - 19095948
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| |||||||||||| ||||||||| |||||| | |||||||||||||||||||||||||||||    
T  19095880 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggttta 19095948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 36378288 - 36378363
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||| |||||||||| ||||| | |||||||| |||||||||||||||||||| ||||    
T  36378288 tacttttactataaatatagactttgtatcagaataaaccttgagatagacggggctgaaacaagggtttagaaag 36378363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 14787771 - 14787698
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaactt--ggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| ||||||||||||||||||||| | |||||||   |||||||||||||||||||||||||||||    
T  14787771 atacttttactataaatatagaccttgtatcatactaaactttgagagatagagggggctgaaacaagggttta 14787698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 47211106 - 47211002
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt------ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||      ||||||||||||||||||||||||||||||    
T  47211106 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagggagatagagggggctgaaacaagggttta 47211007  T
Q  701 taaag 705  Q
     ||||    
T  47211006 gaaag 47211002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 640 - 700
Target Start/End: Original strand, 19322703 - 19322763
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  19322703 ataaatatagatcttgtatcagagtaaaccttgagatagagggggatgaaacaagggttta 19322763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 633 - 705
Target Start/End: Complemental strand, 33415821 - 33415749
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| | |||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  33415821 ttttactacaaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaag 33415749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 705
Target Start/End: Complemental strand, 38928536 - 38928440
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||| ||||||| |||||||||| | |||||| ||||||||| | ||||||||||||||||||||||| ||||| ||||    
T  38928536 tttgttccaatttatgagggattcttttactataaatataggctttgtattagagtaaaccttgagatagagggggctgaaacaagagtttagaaag 38928440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 5100992 - 5101063
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| ||||| |||||| | |||||||||||| ||||||||| ||||||    
T  5100992 atacttttactataaatatagaccttgaatcagggtaaaccttgagatagaggggactgaaacaaaggttta 5101063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 14633316 - 14633390
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || ||||||||||||||||||||||||||||||| ||||||||  |||||||||||| |||||| ||||    
T  14633316 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaaag 14633390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 700
Target Start/End: Complemental strand, 16186200 - 16186103
Alignment:
Q  605 gagatttgttccaaatttta--agcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggct-gaaacaagggttta 700  Q
    |||||||||||||| |||||  || ||||||||||| ||||||||| ||||||||||||||||||| | |||| ||||||||||  |||||||||||||    
T  16186200 gagatttgttccaa-ttttaggagggatacttttactataaatataaaccttgtatcagagtaaaccttgagagagagggggctaaaaacaagggttta 16186103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 633 - 700
Target Start/End: Original strand, 56030443 - 56030510
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||| |||||||||| | |||||||||||||||| | |||||||| ||||||||||||||||||||    
T  56030443 ttttactataaatataggctttgtatcagagtaaaccttgagatagaaggggctgaaacaagggttta 56030510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 3937543 - 3937471
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| || ||||||||||||| | ||||||||||| ||||||||||||||||| ||||    
T  3937543 cttttactataaatatagacttt-tatcagagtaaaccttgagatagagggagctgaaacaagggtttagaaag 3937471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 24348187 - 24348289
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||||||||||||   |||||||     ||||||||||||||||||||||||||||| |    
T  24348187 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaagctaaactttgagagagatagagggggctgaaacaagggtttaga 24348286  T
Q  703 aag 705  Q
    |||    
T  24348287 aag 24348289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 38270321 - 38270248
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | |||||||| | |||||||||||||||||| ||||    
T  38270321 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaagaggctgaaacaagggtttagaaag 38270248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 2485210 - 2485134
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatag-agggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||| ||| ||| |||||||| ||||||||||||| ||||    
T  2485210 tactttcactataaatatagaccttgtatcagagcaaactttgagctagaagggggctaaaacaagggtttagaaag 2485134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 633 - 705
Target Start/End: Complemental strand, 37313400 - 37313328
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| ||||||||||   |||||||| ||||||| | ||||||||||||||||||||||||||||| ||||    
T  37313400 ttttactataaatataggttttgtatcaaagtaaaccttgagatagagggggctgaaacaagggtttagaaag 37313328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 583 - 662
Target Start/End: Original strand, 4569902 - 4569980
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    |||||||||||||||| ||||| |||||||||||| |||||||| | |||||| || |||||||||  ||||||||||||    
T  4569902 aacagaaacgtatttt-cagtgaagatttgttccatattttaagggttactttcactataaatataagccttgtatcaga 4569980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 16453305 - 16453380
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| | |||||||||| | ||||||||||| ||||   ||||||||||||||||||||||||||||| ||||    
T  16453305 tacttttgctataaatataggctttgtatcagagcaaaccgagagatagagggggctgaaacaagggtttaaaaag 16453380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 53405100 - 53405201
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagataga---gggggctgaaacaagggtttataa 703  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  ||||||| |||| |||    |||||||||||||||||||| ||    
T  53405100 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaagggtttagaa 53405199  T
Q  704 ag 705  Q
    ||    
T  53405200 ag 53405201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 2891314 - 2891388
Alignment:
Q  632 cttttacgataaatatagaccttgta-tcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||| |||| |||||| |  |||||||||||||||||||||||||||| ||||    
T  2891314 cttttactataaatatagacattgtaatcagtgtaaaccttaagatagagggggctgaaacaagggtttagaaag 2891388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 640 - 694
Target Start/End: Original strand, 41997498 - 41997552
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaag 694  Q
    |||||||||||| |||||||||||||||| | |||||| ||||||||||||||||    
T  41997498 ataaatatagactttgtatcagagtaaaccttgagataaagggggctgaaacaag 41997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 609 - 690
Target Start/End: Complemental strand, 18535187 - 18535106
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaa 690  Q
    |||||||||| || | || ||| ||||||| |||||||||||||| |  ||||||||||| | |||||||||||||||||||    
T  18535187 tttgttccaatttatgagggatgcttttacaataaatatagacctcgattcagagtaaaccttgagatagagggggctgaaa 18535106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 705
Target Start/End: Complemental strand, 11008931 - 11008828
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttg-----gagatagagggggctgaaacaagggttta 700  Q
    ||||||||| || ||||||||| | |||||||| |||||||||||||||||||||| |  |  |||     |||||||||||||||||||||||||||||    
T  11008931 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcag-gctattttgagagagagatagagggggctgaaacaagggttta 11008833  T
Q  701 taaag 705  Q
     ||||    
T  11008832 gaaag 11008828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 662
Target Start/End: Complemental strand, 52043791 - 52043735
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    ||||||||||||| |||| || ||| ||||||| |||||||||||||||||||||||    
T  52043791 agatttgttccaattttttagggatgcttttactataaatatagaccttgtatcaga 52043735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 8631760 - 8631681
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggaga----tagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||| |||||||| || |||||| ||||    ||||||||||||||||||||||||| ||||    
T  8631760 tactttcactataaatatagactttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttagaaag 8631681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 700
Target Start/End: Original strand, 12102060 - 12102158
Alignment:
Q  605 gagatttgttccaaattttaagcgata-cttttacgataaatatagaccttgtatcagagtaaacttggagataga-gggggctg-aaacaagggttta 700  Q
    |||||||||||||| |||| || |||  ||||||| ||||||||||| |||||||||||  |||| | |||||||| |||||||| |||||||||||||    
T  12102060 gagatttgttccaattttttagggatttcttttactataaatatagatcttgtatcagataaaaccttgagatagaggggggctgaaaacaagggttta 12102158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 12396180 - 12396107
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||| |  |||||| | |||||||| ||||||||||||||| |||| ||||    
T  12396180 cttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaaggatttagaaag 12396107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 12401142 - 12401069
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||| |  |||||| | |||||||| ||||||||||||||| |||| ||||    
T  12401142 cttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaaggatttagaaag 12401069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 662
Target Start/End: Original strand, 16638636 - 16638712
Alignment:
Q  585 cagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    |||||||||||||| ||||| || |||||||||||||||||| | |||| || | | ||||||| |||||||||||||    
T  16638636 cagaaacgtatttt-cagtgcaggtttgttccaaattttaagggttactctttctaaaaatataaaccttgtatcaga 16638712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 18709531 - 18709425
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga--------tagagggggctgaaacaagggtt 698  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||| ||  ||||||| ||||        |||||||||||||||||||||||    
T  18709531 atttgttccaaatttatgagttatacttttactataaatatagaccttgtattaggctaaactttgagagagagagatagagggggctgaaacaagggtt 18709432  T
Q  699 tataaag 705  Q
    || ||||    
T  18709431 tagaaag 18709425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 680
Target Start/End: Complemental strand, 22132759 - 22132686
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  22132759 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagag 22132686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 668
Target Start/End: Original strand, 25357608 - 25357671
Alignment:
Q  606 agatttgttccaaatttta--agcgatacttttacgataaatatagaccttgtatcagagtaaac 668  Q
    ||||||||||||| |||||  || ||||||||||| ||||||||||||||||||||| |||||||    
T  25357608 agatttgttccaa-ttttacgagggatacttttactataaatatagaccttgtatcaaagtaaac 25357671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 522
Target Start/End: Complemental strand, 24334660 - 24334616
Alignment:
Q  478 gagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatg 522  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||    
T  24334660 gagaaatcgtggcacgtttgcagggcaacgtgtcacgattggatg 24334616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 566
Target Start/End: Complemental strand, 36920127 - 36920009
Alignment:
Q  447 attgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaacta 546  Q
    |||||||||||||||||||||| | ||| || | ||||||||||||  | |  |||||||||| |||||||||| |||| | || ||| | |||| |||     
T  36920127 attgtgagagttaacttaaaatcaggttctgca-aaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaattttgaggcaagtcactg 36920029  T
Q  547 gaaaaattgtggtacgatgg 566  Q
    ||||||| |||| |||||||    
T  36920028 gaaaaatcgtggcacgatgg 36920009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 632 - 698
Target Start/End: Original strand, 6132871 - 6132936
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtt 698  Q
    ||||||| |||||||||||| ||||||| | |||||| | |||||||||| ||||| ||||||||||    
T  6132871 cttttactataaatatagacattgtatcggtgtaaacattgagatagaggaggctg-aacaagggtt 6132936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 633 - 695
Target Start/End: Original strand, 13543953 - 13544020
Alignment:
Q  633 ttttacgataaatatagaccttgtatcaga-gtaaactt----ggagatagagggggctgaaacaagg 695  Q
    |||||| ||||||||||| ||||||||||| ||||||||     ||||||||||||||||||||||||    
T  13543953 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaagg 13544020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 630 - 700
Target Start/End: Original strand, 16455283 - 16455353
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| | || ||||||| | ||||||||||| ||||   |||||| ||||||||||||||||||||||    
T  16455283 tacttttgctattaatataggctttgtatcagagcaaaccgagagataaagggggctgaaacaagggttta 16455353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 18409681 - 18409609
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||  ||||||||| ||||||   |||||||| | |||||||||||||||||| ||||    
T  18409681 cttttactataaatatagaatttgtatcagtgtaaacaatgagataga-gaggctgaaacaagggtttagaaag 18409609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 660
Target Start/End: Complemental strand, 22134990 - 22134937
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatca 660  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||||||||||||    
T  22134990 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatca 22134937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 662
Target Start/End: Original strand, 28453658 - 28453715
Alignment:
Q  606 agatttgttccaaat-tttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    ||||||||||||| | ||| || |||| |||||| |||||||||||||||||||||||    
T  28453658 agatttgttccaattatttgagggatatttttactataaatatagaccttgtatcaga 28453715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 7e-51; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 547 - 705
Target Start/End: Complemental strand, 25921893 - 25921735
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaata 646  Q
    ||||||| |||| ||||||||||| ||   ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||||    
T  25921893 gaaaaatcgtggcacgatggtgcgctgacagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaata 25921794  T
Q  647 tagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  25921793 tagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 25921735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 38881972 - 38882123
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| |||||||||||||||||  ||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  38881972 gtggcacgatggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 38882071  T
Q  655 gtatcagagtaaacttggagataga-gggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  38882072 gtatcagagcaaacttggagatagaggggggctgaaacaagggtttagaaag 38882123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 547 - 705
Target Start/End: Original strand, 2174778 - 2174936
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaata 646  Q
    ||||||| |||| ||||||||||  |||  ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||    
T  2174778 gaaaaatcgtggcacgatggtgcactggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatgcttttactataaata 2174877  T
Q  647 tagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
     || ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  2174878 caggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 2174936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 447 - 700
Target Start/End: Complemental strand, 31466498 - 31466245
Alignment:
Q  447 attgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaacta 546  Q
    |||||||||||||||||||||| | ||| || || |||||||||||  |||  |||||||||| ||||||  ||||||| |||||||| | |||| |||     
T  31466498 attgtgagagttaacttaaaatcaggttttgcaggaatcgtggcacgattgaagggcaacgtggcacgatgagatgtttcagttatgaggcaagtcactg 31466399  T
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaata 646  Q
    |||||||  ||| ||||||||||  |||  | ||| | || ||| ||||||||  ||| |||||||||||||||||||||||| |||||||| |||||||    
T  31466398 gaaaaatcttggcacgatggtgcactggcagggaataccataaatgtatttttgggtgcagatttgttccaaattttaagcgacacttttactataaata 31466299  T
Q  647 tagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||||| ||||||    
T  31466298 tagaccttgtatcagactaaactttgagataaaaggggctgaaacaaaggttta 31466245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 4236497 - 4236646
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  | ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4236497 gtggcacgatggtgcgctggcagggaaaaacagaaacgtattttg-agtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 4236595  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||| ||||    
T  4236596 gtatcagagcaaacttggagataaagggggctgaaacaagagtttagaaag 4236646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 577 - 705
Target Start/End: Complemental strand, 2818726 - 2818598
Alignment:
Q  577 gcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagat 676  Q
    ||||| |||| |||||||||||   ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  2818726 gcgaataacaaaaacgtattttcgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaactttgagat 2818627  T
Q  677 agagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||||||||| ||||    
T  2818626 agagggggctgaaacaagggtttagaaag 2818598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 448 - 700
Target Start/End: Complemental strand, 12556442 - 12556190
Alignment:
Q  448 ttgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactag 547  Q
    ||||||||||||| ||||||| | ||| || ||||||||||||| | | |  |||||||||| ||| |||||| |||| |||| ||| | |||| ||| |    
T  12556442 ttgtgagagttaatttaaaatcaggttctgcagaaatcgtggcataatggctgggcaacgtggcacaattggaggtttcagttttgaggcaagtcactgg 12556343  T
Q  548 aaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatat 647  Q
    |    | |||| |||||| |||| |||  ||||| |||||||| ||||||||  ||  ||||||||| |||| |||||||||||||||||| ||||||||    
T  12556342 atttttcgtggcacgatgatgcgctggcagcgaataacagaaatgtatttttgtgtacagatttgtttcaaaatttaagcgatacttttactataaatat 12556243  T
Q  648 agaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  12556242 agaccttgtatcagagtaaactttgagatagagggggctgaaataagggttta 12556190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 16776024 - 16776175
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgat-aaatatagacct 653  Q
    |||| ||||||||||| |||   |||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||    
T  16776024 gtggcacgatggtgcgctggcatcgaaaaacagaaacatatttttgagtgaagatttgttccaaattttaagcgatacttttactataaaatatagacct 16776123  T
Q  654 tgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| ||||    
T  16776124 tgtatctgagcaaactttgagatagagggggctgaaacaagggtttacaaag 16776175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 36402739 - 36402595
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| |||||||||||||||   |||| |||||||||||||||||  ||| |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  36402739 gtggcacgatggtgcgttggcaacgaataacagaaacgtatttttgggtgcagatttgttc-aaattttaagcgatacttttactataaatatagacctt 36402641  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
     ||||||||||||| | |||||||||||||||||||||||||||||    
T  36402640 atatcagagtaaacgttgagatagagggggctgaaacaagggttta 36402595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 577 - 705
Target Start/End: Original strand, 21947916 - 21948043
Alignment:
Q  577 gcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagat 676  Q
    ||||| ||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  21947916 gcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaattttgagat 21948015  T
Q  677 agagggggctgaaacaagggtttataaag 705  Q
    ||| |||||||||||||||||||| ||||    
T  21948016 aga-ggggctgaaacaagggtttagaaag 21948043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 577 - 705
Target Start/End: Complemental strand, 20507852 - 20507724
Alignment:
Q  577 gcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagat 676  Q
    ||||| ||||||||| |||||||  | | |||||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  20507852 gcgaataacagaaacatatttttgggagcagatttgttccaagatttaagcgatacttttactataaatatagatcttgtatcagagtaaactttgagat 20507753  T
Q  677 agagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||||||||| ||||    
T  20507752 agagggggctgaaacaagggtttagaaag 20507724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 6756361 - 6756511
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |||||||||||||||||  ||| |||||| ||||||||||||||  |||||||||| || |||||||| |||    
T  6756361 gtggcacgatggtgcgctggcagcgaataacagaaacgtattttttggtgcagatttattccaaattttaagttatacttttactattaatatagatctt 6756460  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| | ||||||| ||||||||||| |||||||||| |||||| ||||    
T  6756461 gtatcatattaaactttgagatagagggagctgaaacaatggtttagaaag 6756511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 547 - 677
Target Start/End: Original strand, 39797947 - 39798077
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaata 646  Q
    |||||||  ||| ||||||||||| |||  ||||| ||||||||| |||||||  ||| |||||||||||||||||||||| | |||||||| |||||||    
T  39797947 gaaaaatcatggcacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcaaaacttttactataaata 39798046  T
Q  647 tagaccttgtatcagagtaaacttggagata 677  Q
    |||||||||||| |||||||||||| |||||    
T  39798047 tagaccttgtattagagtaaacttgaagata 39798077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 555 - 680
Target Start/End: Complemental strand, 21684873 - 21684748
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||| |||||||||||| | |||||||| |||||||||||||||    
T  21684873 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaattttaagcaaaacttttactataaatatagacctt 21684774  T
Q  655 gtatcagagtaaacttggagatagag 680  Q
    |||||||  ||||||| |||| ||||    
T  21684773 gtatcaggctaaactttgagagagag 21684748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 606 - 705
Target Start/End: Original strand, 31542653 - 31542752
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| ||||    
T  31542653 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaaag 31542752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 606 - 705
Target Start/End: Original strand, 31544998 - 31545097
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||||||||| || |||||| |||||| |||||||||||||||||||||| ||||    
T  31544998 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagataaagggggctgaaacaagggtttagaaag 31545097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 26098589 - 26098518
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  26098589 atacttttactataaatatagaccttgaatcagagtaaacctggagatagagggggctgaaataagggttta 26098518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 26097674 - 26097745
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| || ||||||    
T  26097674 atacttttactataaatatagaccttgaatcagagtaaactttgagatagagggggctgaaataaaggttta 26097745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 17072827 - 17072900
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  17072827 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 17072900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 25904047 - 25904120
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  25904047 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 25904120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 632 - 700
Target Start/End: Original strand, 36208524 - 36208593
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctg-aaacaagggttta 700  Q
    ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  36208524 cttttactataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaaacaagggttta 36208593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 629 - 697
Target Start/End: Original strand, 18596588 - 18596656
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggt 697  Q
    |||||||||| |||||||||||||||| |||||||||||| | | ||||||||||||||||||||||||    
T  18596588 atacttttactataaatatagaccttgaatcagagtaaaccttgggatagagggggctgaaacaagggt 18596656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 10529436 - 10529361
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||| ||||||||| ||| ||||||||||||||| ||||    
T  10529436 tactttcactataaatatagaccttgtatcagagcaaactttgagatagagtgggttgaaacaagggtttagaaag 10529361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 606 - 705
Target Start/End: Complemental strand, 31179732 - 31179633
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||  | |||||||||   |||||||| |||||||||||| |||||||| || |||||| ||||||||||| ||||||||||||||||| ||||    
T  31179732 agatttgttatagattttaagcaggacttttactataaatatagacattgtatcaaagcaaactttgagatagagggagctgaaacaagggtttagaaag 31179633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 39854426 - 39854500
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||    
T  39854426 tactttcactataaatatagaccttgtatcagagcaaactttgagataga-ggggctgaaacaagggtttagaaag 39854500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 630 - 700
Target Start/End: Original strand, 40221464 - 40221534
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| |||||||||||| |||  ||||||||||| | |||||||||||||||||||||||||||||    
T  40221464 tacttttactataaatatagacattgactcagagtaaaccttgagatagagggggctgaaacaagggttta 40221534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 640 - 700
Target Start/End: Complemental strand, 6661509 - 6661449
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||||||||    
T  6661509 ataaatatagaccttgtatcagagtaaaccttgagatagagagggttgaaacaagggttta 6661449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 640 - 700
Target Start/End: Complemental strand, 18511541 - 18511479
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggaga--tagagggggctgaaacaagggttta 700  Q
    ||||||||||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||    
T  18511541 ataaatatagaccttgtatcagactaaactttgagagatagagggggctgaaacaagggttta 18511479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 41586044 - 41585973
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| ||||||||||   |||||||||||||||| | |||||| ||||||||||||||||||||||    
T  41586044 atacttttactataaatataggttttgtatcagagtaaaccttgagataaagggggctgaaacaagggttta 41585973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 4409999 - 4410078
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| ||||||     ||||||||||||||||||||||||||||| ||||    
T  4409999 tactttcactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaaag 4410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 18466599 - 18466701
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  ||| |||||| ||||||||||||||||||||||  |||||||     ||||||||||||||||||||||||||||| |    
T  18466599 atttgttccaaatttatgagttatatttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttaga 18466698  T
Q  703 aag 705  Q
    |||    
T  18466699 aag 18466701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 18468926 - 18469028
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||||||||||||   |||||||     ||||||||||||||||||||||||||||| |    
T  18468926 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcatgataaactttgagagagatagagggggctgaaacaagggtttaga 18469025  T
Q  703 aag 705  Q
    |||    
T  18469026 aag 18469028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 632 - 700
Target Start/End: Original strand, 20044954 - 20045022
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| |||||||||| | ||||||||||| |||| | |||| ||||||||||||||||||||||||    
T  20044954 cttttactataaatataggctttgtatcagagcaaaccttgagacagagggggctgaaacaagggttta 20045022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 607 - 670
Target Start/End: Original strand, 29748260 - 29748324
Alignment:
Q  607 gatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga-gtaaactt 670  Q
    ||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||| ||||||||    
T  29748260 gatttgttccaaattttgagggatgcttttactataaatatagaccttgtatcagatgtaaactt 29748324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 632 - 700
Target Start/End: Complemental strand, 34531001 - 34530933
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||  ||||||||||| ||| |||||||||||| | ||||||||||||||||||||||| |||||    
T  34531001 cttttactgtaaatatagactttgaatcagagtaaaccttgagatagagggggctgaaacaagtgttta 34530933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 447 - 570
Target Start/End: Original strand, 659711 - 659833
Alignment:
Q  447 attgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaacta 546  Q
    |||||||||||||||||||||| | ||| || ||||||||||||||  | |   ||||||||| |||||||||| |||| |||| ||| | |||| |||     
T  659711 attgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctaggcaacgtggcacgattggaggtttcagtt-tgaggcaagtcactg 659809  T
Q  547 gaaaaattgtggtacgatggtgcg 570  Q
    ||||||| |||| |||||||||||    
T  659810 gaaaaatcgtggcacgatggtgcg 659833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 634 - 700
Target Start/End: Complemental strand, 18509652 - 18509585
Alignment:
Q  634 tttacgataaatatagaccttgtatcagagtaaacttggagatagag-ggggctgaaacaagggttta 700  Q
    ||||| ||||||||||||||||||||||| ||||||| |||| | || ||||||||||||||||||||    
T  18509652 tttactataaatatagaccttgtatcagactaaactttgagagatagaggggctgaaacaagggttta 18509585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 447 - 530
Target Start/End: Complemental strand, 20504454 - 20504371
Alignment:
Q  447 attgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagtt 530  Q
    |||||||||||||||||||||| | ||| || ||||||||||||||  | |  |||||||||| |||||||||| |||||||||    
T  20504454 attgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatagctgggcaacgtggcacgattggaggttttagtt 20504371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 37706117 - 37706042
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| | |||||||||||| ||||||||| |||||| | ||||||||||||||||||| || |||||| ||||    
T  37706117 tacttttgctataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaataaaggtttagaaag 37706042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 635 - 705
Target Start/End: Complemental strand, 10474655 - 10474585
Alignment:
Q  635 ttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||| |||||||||||| ||||||||| |||||| | || ||||||||||||||||||||| |||| ||||    
T  10474655 ttactataaatatagacattgtatcagtgtaaaccttgaaatagagggggctgaaacaaggatttagaaag 10474585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 700
Target Start/End: Original strand, 10586758 - 10586854
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagataga---gggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  ||||||| |||| |||    ||||||||||||||||||||    
T  10586758 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaagggttta 10586854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 20042994 - 20043067
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||| | |||||||| || |||| | ||||||||||||||||||||||| ||||| ||||    
T  20042994 cttttactataaatataggctttgtatcatagcaaaccttgagatagagggggctgaaacaagtgtttagaaag 20043067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 449 - 530
Target Start/End: Complemental strand, 20508001 - 20507920
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagtt 530  Q
    |||||||||||||||||||| | ||| || ||||||||||||||  | || |||||||||  |||||||||| |||||||||    
T  20508001 tgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatagttgggcaacgtagcacgattggaggttttagtt 20507920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 24126800 - 24126873
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| || |||||| |||||| | |||||||| |||||||||||||| ||||| ||||    
T  24126800 cttttactataaatatagacattatatcagtgtaaaccttgagatagatggggctgaaacaagagtttagaaag 24126873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 705
Target Start/End: Original strand, 27912449 - 27912553
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt------ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||       ||||||||||| |||||||||||||||||    
T  27912449 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggtgctgaaacaagggttta 27912548  T
Q  701 taaag 705  Q
     ||||    
T  27912549 gaaag 27912553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 31472948 - 31472875
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||| ||| |||||| || |||||| | ||||||||||||||| ||||||||||||| ||||    
T  31472948 cttttactataaatatggacattgtattagtgtaaaccttgagatagagggggctaaaacaagggtttagaaag 31472875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 1189949 - 1189871
Alignment:
Q  632 cttttacgataaatatagaccttgtatcaga-gtaaa-cttg---gagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||   ||||||||||||||||||||||| ||||| ||||    
T  1189949 cttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggctgaaacaagagtttagaaag 1189871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 637 - 705
Target Start/End: Original strand, 2954365 - 2954433
Alignment:
Q  637 acgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||| | ||||||||| |||||||| |||||||||| |  ||||||||||||||| ||||    
T  2954365 acgataaatataggctttgtatcagtgtaaactttgagatagaggagtatgaaacaagggtttagaaag 2954433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 640 - 700
Target Start/End: Original strand, 21288716 - 21288776
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||||| || ||||||||| | ||||||||||||| ||||| |||||||||    
T  21288716 ataaatatagaccttgaattagagtaaaccttgagatagagggggttgaaataagggttta 21288776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 661
Target Start/End: Complemental strand, 34477433 - 34477378
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcag 661  Q
    ||||||||| || ||||||||||| |||||||| ||||| ||||||||||||||||    
T  34477433 agatttgttacagattttaagcgagacttttactataaaaatagaccttgtatcag 34477378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 699
Target Start/End: Original strand, 42770691 - 42770785
Alignment:
Q  606 agatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctg-aaacaagggttt 699  Q
    ||||||||||||| ||| | || ||||||||||| ||||||||| || ||||||| |||||||| | |||||||||||| ||| ||||||||||||    
T  42770691 agatttgttccaattttatgagggatacttttactataaatataaactttgtatc-gagtaaaccttgagatagaggggactgaaaacaagggttt 42770785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 662
Target Start/End: Complemental strand, 2144955 - 2144897
Alignment:
Q  605 gagatttgttccaaat-tttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    |||||||||||||| | ||| || ||||||||||| |||||||||||||||||||||||    
T  2144955 gagatttgttccaattatttgagggatacttttactataaatatagaccttgtatcaga 2144897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 695833 - 695906
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| || ||||||||| |||||| || |||||| | |||||| |||||| ||||||||||||||| ||||    
T  695833 cttttactatgaatatagacattgtatgagtgtaaaccttgagataaagggggatgaaacaagggtttagaaag 695906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 676
Target Start/End: Complemental strand, 3373401 - 3373332
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagat 676  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||| || |||||| |||||    
T  3373401 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaaagcaaactttgagat 3373332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 680
Target Start/End: Original strand, 15552154 - 15552227
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  15552154 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagag 15552227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 705
Target Start/End: Complemental strand, 16092529 - 16092462
Alignment:
Q  642 aaatatagaccttgtatcaga-gtaaacttg---gagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| |||||||||| |||||||||   ||||||||||||| ||||||||||||||| ||||    
T  16092529 aaatatagactttgtatcagatgtaaacttgtgagagatagagggggttgaaacaagggtttagaaag 16092462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 680
Target Start/End: Original strand, 27910364 - 27910437
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  27910364 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggttaaactttgagagagag 27910437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 675
Target Start/End: Complemental strand, 38960403 - 38960334
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||||||||    
T  38960403 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaacttggaga 38960334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 530
Target Start/End: Original strand, 21947768 - 21947851
Alignment:
Q  447 attgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagtt 530  Q
    |||||||||||||||||||||| | ||| || ||||||||||||||  | |   ||||||||| |||||||||| |||| ||||    
T  21947768 attgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctaggcaacgtgacacgattggaggtttcagtt 21947851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 661
Target Start/End: Complemental strand, 34479794 - 34479739
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcag 661  Q
    ||||||||| || ||||||||||| || ||||| ||||| ||||||||||||||||    
T  34479794 agatttgttacagattttaagcgagacctttactataaaaatagaccttgtatcag 34479739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 632 - 682
Target Start/End: Original strand, 2723911 - 2723961
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagaggg 682  Q
    ||||||| |||||||||||| ||||||||| |||||| | |||||||||||    
T  2723911 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaggg 2723961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 608 - 661
Target Start/End: Original strand, 25803935 - 25803989
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcag 661  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||    
T  25803935 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcag 25803989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 17818816 - 17818752
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||| ||||||||| |||||| | |||| ||| |||||||||||||| ||||| ||||    
T  17818816 ataaatatagacattgtatcagtgtaaaccttgagaaaga-ggggctgaaacaagagtttagaaag 17818752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 705
Target Start/End: Complemental strand, 21684746 - 21684713
Alignment:
Q  672 gagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||||||||||||||| ||||    
T  21684746 gagatagagggggctgaaacaagggtttaaaaag 21684713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 675
Target Start/End: Original strand, 23665056 - 23665125
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||| ||||    
T  23665056 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgaga 23665125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 675
Target Start/End: Complemental strand, 23793531 - 23793462
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||| ||||    
T  23793531 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgaga 23793462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 705
Target Start/End: Complemental strand, 34477349 - 34477316
Alignment:
Q  672 gagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||||||||||||||| ||||    
T  34477349 gagatagagggggctgaaacaagggtttagaaag 34477316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 705
Target Start/End: Complemental strand, 34479714 - 34479681
Alignment:
Q  672 gagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||||||||||||||| ||||    
T  34479714 gagatagagggggctgaaacaagggtttagaaag 34479681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 39398327 - 39398255
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| ||||||||| || ||||| | | |||||| | |||||||||||| |||||||||||||||| ||||    
T  39398327 cttttactataaatataaacattgtaccggtgtaaaccttgagatagagggg-ctgaaacaagggtttagaaag 39398255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 7e-51; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 51749906 - 51750056
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||| ||||| ||| |||||| |||||||||||||||||  ||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  51749906 gtggcacgatagtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 51750005  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  51750006 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaag 51750056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 555 - 705
Target Start/End: Complemental strand, 28207480 - 28207330
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| |||| |||||| |||||  ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28207480 gtggcacgatggtgcgctggcggcgaataacataaacgtttttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 28207381  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  28207380 gtatcagactaaactttgagatagagggggctgaaacaagggtttagaaag 28207330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 51752232 - 51752382
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| |||| ||||||||||||  ||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  51752232 gtggcacgatggtgcgctggcggcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 51752331  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  51752332 gtatcagagcaaacttggagatagagggggctgaaacaagagtttagaaag 51752382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 560 - 705
Target Start/End: Original strand, 13761709 - 13761854
Alignment:
Q  560 acgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatc 659  Q
    ||||||||| | ||| |||||| |||||||||||||||||  ||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  13761709 acgatggtgtgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatc 13761808  T
Q  660 agagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||    
T  13761809 agagcaaacttggagatagagagggctgaaacaagggtttagaaag 13761854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 554 - 690
Target Start/End: Complemental strand, 30790809 - 30790673
Alignment:
Q  554 tgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacct 653  Q
    ||||| ||||||||||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |    
T  30790809 tgtggcacgatggtgcgctggaggggaaaaacataaacgtatttttcagtgcagatttgttccaaattttaagcgatacttttactataaatatagacat 30790710  T
Q  654 tgtatcagagtaaacttggagatagagggggctgaaa 690  Q
    ||||||||||||||| | ||||||||||| |||||||    
T  30790709 tgtatcagagtaaaccttgagatagagggagctgaaa 30790673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 451 - 694
Target Start/End: Complemental strand, 38925996 - 38925753
Alignment:
Q  451 tgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactagaaa 550  Q
    |||||||||||||||||| | |||  | ||||||||||| ||  | |  |||||||||| |||||||||| |||| |||| |||   |||| ||| ||      
T  38925996 tgagagttaacttaaaatcaggttccgcagaaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagttttgagacaagttactggatt 38925897  T
Q  551 aattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatataga 650  Q
      |||||| ||||||| |||||||  ||||| |||||||  ||||||||  ||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  38925896 ttttgtggcacgatggggcgttggcagcgaacaacagaagtgtatttttgggtgcagatttattccaaattttaagcgatacttttactataaatataga 38925797  T
Q  651 ccttgtatcagagtaaacttggagatagagggggctgaaacaag 694  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  38925796 ccttgtatcagagtaaactttgagatagagggggctgaaacaag 38925753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 13214948 - 13215098
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||| |||||  || || |||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13214948 gtggcacgatggtgtgttggcagcaaataacaaaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 13215047  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  13215048 gtatcagagtaaattttgagatagagggggctgaaacaagggtttagaaag 13215098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 555 - 699
Target Start/End: Original strand, 47451515 - 47451659
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||   ||||| |||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  47451515 gtggcacgatggtgcgctgacagcgaataacagaaacgtattttttggtgcagatttgttccaaatattaagcgatacttttactataaatatagacctt 47451614  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggttt 699  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  47451615 gtatcagagtaaactttgagatagagggggcttaaacaagggttt 47451659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 547 - 705
Target Start/End: Original strand, 6822874 - 6823032
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaata 646  Q
    ||||||| |||| ||||||||||| ||| |||||| || ||||| ||||||||  ||| |||||||||||||||||||||||| |||||||| ||  |||    
T  6822874 gaaaaatcgtggcacgatggtgcgctggcggcgaataatagaaatgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactatttata 6822973  T
Q  647 tagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  6822974 tagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 6823032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 41646787 - 41646937
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||  |||  ||||| ||||||||| |||||||   || ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41646787 gtggcacgatggtgcactggcagcgaataacagaaacatatttttggatgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 41646886  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  41646887 gtatcagagtaaactttgagatagagggggctgaaataagggtttagaaag 41646937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 20302326 - 20302476
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| ||||||||| |||||||  ||| | ||||||||||||||||||| || |||||||  |||||||||||||||    
T  20302326 gtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcatatttgttccaaattttaagtgaaacttttattataaatatagacctt 20302425  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  20302426 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 20302476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 555 - 710
Target Start/End: Original strand, 28840545 - 28840702
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||| | |||  ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28840545 gtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 28840644  T
Q  655 gtatcagagtaaactt--ggagatagagggggctgaaacaagggtttataaagcaaac 710  Q
    ||||||||| ||||||   |||||| |||||| ||||||||||||||| |||| ||||    
T  28840645 gtatcagagcaaactttgagagatacagggggatgaaacaagggtttagaaaggaaac 28840702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 555 - 700
Target Start/End: Complemental strand, 10400242 - 10400097
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  || || |||| ||||||||||||  ||| |||||||||||||||||||||||| |||||| | |||||||||||||||    
T  10400242 gtggcacgatggtgcgctggcagcaaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgaaactttttctataaatatagacctt 10400143  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  10400142 gtatcagagcaaactgggagatagagggggctgaaacaagggttta 10400097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 6823751 - 6823902
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| |||| ||||||||||||  ||| |||||||||||||||||||||||| |||||||| ||  |||||||||||    
T  6823751 gtggcacgatggtgcgctggcggcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactatttatatagacctt 6823850  T
Q  655 gtatcagagtaaacttggagataga-gggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||| ||||    
T  6823851 gtatcagagcaaactttgagatagaggggggctgaaacaagggtttagaaag 6823902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 577 - 705
Target Start/End: Original strand, 28842382 - 28842512
Alignment:
Q  577 gcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaactt--ggag 674  Q
    ||||||||||||||| ||||||| |||| | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||   |||    
T  28842382 gcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaagcgatacttttactataaatataaaccttgtatcagagcaaactttgagag 28842481  T
Q  675 atagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||||||||||| ||||    
T  28842482 atagagggggctgaaacaagggtttagaaag 28842512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 583 - 705
Target Start/End: Original strand, 15823441 - 15823563
Alignment:
Q  583 aacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagaggg 682  Q
    ||||||||| |||||||   || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| ||||    
T  15823441 aacagaaacatatttttggatgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcaaagtaaacttagagataaaggg 15823540  T
Q  683 ggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||| ||||    
T  15823541 ggctgaaacaagggtttagaaag 15823563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 555 - 698
Target Start/End: Complemental strand, 3580032 - 3579887
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| ||| |||||| | || |||||||||||  |||| | |||||||||||||||||||||||||||||||  ||||||||||||||    
T  3580032 gtggcacgatggtgcgctggcggcgaatatcataaacgtattttagagtgcaaatttgttccaaattttaagcgatacttttactttaaatatagacctt 3579933  T
Q  655 gtatcagagtaaacttggagatagag--ggggctgaaacaagggtt 698  Q
    ||||||| ||||| || |||||||||  ||||||||||||||||||    
T  3579932 gtatcagcgtaaaatttgagatagagggggggctgaaacaagggtt 3579887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 628 - 719
Target Start/End: Complemental strand, 49495540 - 49495449
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaagcaaactagggtttg 719  Q
    ||||||||||| |||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49495540 gatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttataaatcaaactagggtttg 49495449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 554 - 700
Target Start/End: Original strand, 39462384 - 39462531
Alignment:
Q  554 tgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcag-tggagatttgttccaaattttaagcgatacttttacgataaatatagacc 652  Q
    ||||| ||||||||||| | |  | ||| |||||||||||||||||  | || |||||||||||||||||||||  ||||||| || |||||||||||||    
T  39462384 tgtggcacgatggtgcgcttgcagtgaataacagaaacgtattttttgggtgcagatttgttccaaattttaagtaatactttcactataaatatagacc 39462483  T
Q  653 ttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||||||| |||||||||  ||||||||||| ||||||    
T  39462484 ttgtatcagagtaaactttgagatagagaaggctgaaacaaaggttta 39462531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 560 - 705
Target Start/End: Complemental strand, 14098378 - 14098234
Alignment:
Q  560 acgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatc 659  Q
    ||||||||||| |||  ||||| |||| ||||||||||||  ||| ||||| |||||||||||||||  ||||||| || ||||||||||||||||||||    
T  14098378 acgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatt-gttccaaattttaagtaatactttcactataaatatagaccttgtatc 14098280  T
Q  660 agagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    | | ||||||| |||||||||||| ||||||||| |||||| ||||    
T  14098279 aaactaaactttgagatagaggggactgaaacaatggtttaaaaag 14098234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 18190579 - 18190659
Alignment:
Q  232 gtatcatgaagtgggtttccaagcttgta-tgaagcagtttatgaagaagttgaatgctttcatattgtaatggaattgtg 311  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  18190579 gtatcatgaagtgggtttgcaagcttgtagtgaaggagtttatgaagaagttgaatgctttcatattgtgatggaattgtg 18190659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 606 - 697
Target Start/End: Original strand, 16231519 - 16231610
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggt 697  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  16231519 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggt 16231610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 449 - 644
Target Start/End: Original strand, 49687301 - 49687496
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactaga 548  Q
    |||||||||||||||||||| | |||||| |||||||||||||   | |  |||||||||| ||| |||||| |||| |||| ||| | |||| ||| ||    
T  49687301 tgtgagagttaacttaaaatcaggttatgtagaaatcgtggcatgatggctgggcaacgtggcacaattggaggtttcagttttgaggcaagtcactgga 49687400  T
Q  549 aaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaa 644  Q
        | |||| ||||||||||| ||   ||||| |||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||    
T  49687401 tttttcgtggcacgatggtgcgctgacagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaa 49687496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 606 - 700
Target Start/End: Original strand, 16226085 - 16226179
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| || ||||||||| | |||||||| ||||||||||||||||||||| || |||||| |||||||||||| || |||||||||||||    
T  16226085 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagatagaggggtctaaaacaagggttta 16226179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 28998593 - 28998522
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  28998593 atacttttactataaatatagactttgaatcagagtaaactttgagatagaggaggctgaaacaagggttta 28998522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 29004309 - 29004238
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  29004309 atacttttactataaatatagactttgaatcagagtaaactttgagatagaggaggctgaaacaagggttta 29004238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 2510690 - 2510588
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     |||||||||||||||||||||||||||||||    
T  2510690 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttata 2510591  T
Q  703 aag 705  Q
    |||    
T  2510590 aag 2510588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 640 - 705
Target Start/End: Original strand, 2617468 - 2617533
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||| ||||    
T  2617468 ataaatatagaccttgtatcagagcaaactttgagatagaggaggctgaaacaagggtttagaaag 2617533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 632 - 700
Target Start/End: Complemental strand, 14183923 - 14183855
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| ||||||||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||    
T  14183923 cttttactataaatatagaccatgtatcagagtaaaccttgagatagagagggctgaaacaagggttta 14183855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 628 - 700
Target Start/End: Complemental strand, 18800910 - 18800838
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||| ||||||||||||||||||||||||||||| | |||||| | ||||||||||||| ||||||    
T  18800910 gatacttttactataaatatagaccttgtatcagagtaaaccttgagatacaaggggctgaaacaaaggttta 18800838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 621 - 705
Target Start/End: Original strand, 20291390 - 20291474
Alignment:
Q  621 tttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| ||| || ||||||||||| | ||||||||||||||| ||||    
T  20291390 tttaagcgaaacttttactataaatatagaccttgtattagagcaaattttgagatagagggagatgaaacaagggtttagaaag 20291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 633 - 705
Target Start/End: Complemental strand, 25251611 - 25251539
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| |||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||||| ||||    
T  25251611 ttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaaaggtttagaaag 25251539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 605 - 700
Target Start/End: Original strand, 42922150 - 42922246
Alignment:
Q  605 gagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||||||| | || ||||||||||| |||||||||||  |||||||||||||||| |  |||||||||||| ||||| |||||||||    
T  42922150 gagatttgttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagatagagggggttgaaataagggttta 42922246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 642 - 705
Target Start/End: Complemental strand, 25248841 - 25248778
Alignment:
Q  642 aaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  25248841 aaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaag 25248778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 11457812 - 11457739
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | |||||||||||||||||||||| |||||| ||||    
T  11457812 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaatggtttagaaag 11457739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 640 - 705
Target Start/End: Original strand, 18307061 - 18307126
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  18307061 ataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 18307126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 628 - 705
Target Start/End: Complemental strand, 31423215 - 31423138
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||||| |||||||||  | ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  31423215 gatacttttactataaatataagcattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 31423138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 606 - 700
Target Start/End: Original strand, 47177276 - 47177374
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| || |||||||||   |||||||| ||||||||||||||||||||| || ||||||     |||||||||||||||||||||||||||||    
T  47177276 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggttta 47177374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 606 - 700
Target Start/End: Original strand, 47179627 - 47179725
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| || |||||||||   |||||||| ||||||||||||||||||||| || ||||||     |||||||||||||||||||||||||||||    
T  47179627 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggttta 47179725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 50079158 - 50079085
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||| || |||||| | ||||||||||||||||||||||||||||| ||||    
T  50079158 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 50079085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 17324976 - 17324905
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||||||| | |||||||||| || ||||| |||||||| |||||||||||||    
T  17324976 atacttttactataaatatagaccttgaaccagagtaaacctgaagatacagggggctaaaacaagggttta 17324905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 605 - 700
Target Start/End: Complemental strand, 26613604 - 26613506
Alignment:
Q  605 gagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga-gtaaacttg-gagatagagggggctg-aaacaagggttta 700  Q
    |||||||||||||| |||| || ||| ||||| | ||||||||||||||||||||||| | || |||| |||||||||||||||| |||||||||||||    
T  26613604 gagatttgttccaatttttgagggattcttttgctataaatatagaccttgtatcagatgaaaccttgagagatagagggggctgaaaacaagggttta 26613506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 9459785 - 9459681
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt------ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||       |||||||||||||||||||||||||||||    
T  9459785 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggttta 9459686  T
Q  701 taaag 705  Q
     ||||    
T  9459685 gaaag 9459681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 9463612 - 9463508
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt------ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||       |||||||||||||||||||||||||||||    
T  9463612 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggttta 9463513  T
Q  701 taaag 705  Q
     ||||    
T  9463512 gaaag 9463508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 630 - 700
Target Start/End: Complemental strand, 12302849 - 12302774
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcaga-gtaaa-cttg---gagatagagggggctgaaacaagggttta 700  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||   |||||||||||||||||||||||||||||    
T  12302849 tacttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggctgaaacaagggttta 12302774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 31489859 - 31489932
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| |||||| || |||||| | ||||||||||||| ||||||||||||||| ||||    
T  31489859 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggttgaaacaagggtttagaaag 31489932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 31735887 - 31735785
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||     ||||||||||||||| ||||||||||||| |    
T  31735887 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgaatgagatagagggggctaaaacaagggtttaga 31735788  T
Q  703 aag 705  Q
    |||    
T  31735787 aag 31735785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 50248909 - 50248836
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||||| |||||||||| |||||| ||||    
T  50248909 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaaaggtttaaaaag 50248836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 587 - 662
Target Start/End: Complemental strand, 2401568 - 2401492
Alignment:
Q  587 gaaacgtatttttcagtggagatttgttccaaattttaagcgatacttt-tacgataaatatagaccttgtatcaga 662  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||||  || |||||||||  ||||||||||||    
T  2401568 gaaacgtatttttcagtgaagatttgttccatattttaagggatactttccactataaatataagccttgtatcaga 2401492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 629 - 705
Target Start/End: Complemental strand, 6996040 - 6995964
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||  |||||||||||||||| |||||||||||  | |||||||||||||| ||||||| |||||| ||||    
T  6996040 atacttttattataaatatagaccttgaatcagagtaaatcttgagatagagggggccgaaacaacggtttagaaag 6995964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 606 - 700
Target Start/End: Complemental strand, 8347633 - 8347538
Alignment:
Q  606 agatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcaga-gtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||| ||| | || | ||||||||| ||||| ||||||||||||||||| |||||| | ||||||||||||| |||||||||||||||    
T  8347633 agatttgttccaattttatgaggggtacttttactataaa-atagaccttgtatcagatgtaaaccttgagatagagggggttgaaacaagggttta 8347538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 633 - 705
Target Start/End: Original strand, 17318838 - 17318910
Alignment:
Q  633 ttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| ||||||||||   |||||||| ||||||| | ||||||||||||||||||||||||||||| ||||    
T  17318838 ttttactataaatataggttttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaaag 17318910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 448 - 552
Target Start/End: Complemental strand, 30790936 - 30790832
Alignment:
Q  448 ttgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatgaagaaagtaactag 547  Q
    ||||||||| ||||||||||  | ||| ||||||||||||| ||| ||||  | |||| ||| ||||||||||||||| |||||||||| |||| ||| |    
T  30790936 ttgtgagagctaacttaaaaccaggttctggagaaatcgtgacacgtttgcagagcaatgtggcacgattggatgtttcagttatgaagcaagtcactgg 30790837  T
Q  548 aaaaa 552  Q
    |||||    
T  30790836 aaaaa 30790832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 608 - 700
Target Start/End: Original strand, 47906183 - 47906282
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt------ggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  |||||||       |||||||||||||||||||||||||||||    
T  47906183 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggttta 47906282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 700
Target Start/End: Complemental strand, 2949571 - 2949500
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| |||||||||||  ||| ||| ||| |||| | |||||||||||||||||||||||||||||    
T  2949571 atacttttacaataaatatagatattgaatccgagaaaaccttgagatagagggggctgaaacaagggttta 2949500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 447 - 534
Target Start/End: Complemental strand, 3580161 - 3580074
Alignment:
Q  447 attgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagttatga 534  Q
    |||||| ||||||||||||||| | |||||| || |||||||||||  |||  |||||||||| ||| ||||||||||| ||||||||    
T  3580161 attgtgggagttaacttaaaatcaggttatgcaggaatcgtggcacgattgcagggcaacgtgacacaattggatgtttcagttatga 3580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 705
Target Start/End: Complemental strand, 27337282 - 27337202
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| ||||||||||||||||||| ||  |||||||     ||||||||||||||||||||||||||||| ||||    
T  27337282 atacttttactataaatatagaccttgtattaggctaaactttgagagagatagagggggctgaaacaagggtttagaaag 27337202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 705
Target Start/End: Complemental strand, 21948526 - 21948451
Alignment:
Q  634 tttacgataaatatagaccttgtatcagagtaaacttggaga----tagagggggctgaaacaagggtttataaag 705  Q
    ||||| ||||||||||||||||||||| | ||||||| ||||    ||||||||||||||||||||||||| ||||    
T  21948526 tttactataaatatagaccttgtatcatactaaactttgagagagatagagggggctgaaacaagggtttagaaag 21948451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 698
Target Start/End: Original strand, 24325575 - 24325674
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt--------ggagatagagggggctgaaacaagggtt 698  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||||||||||||||| ||||||         |||||||||||||||||||||||||||    
T  24325575 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcagagcaaactttgagagagagagatagagggggctgaaacaagggtt 24325674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 705
Target Start/End: Original strand, 39932017 - 39932090
Alignment:
Q  634 tttacgataaatatagaccttgtatcagagtaaacttggaga--tagagggggctgaaacaagggtttataaag 705  Q
    ||||| ||||||||||||||||||| |||  |||||| ||||  ||||||||||||||||||||||||| ||||    
T  39932017 tttactataaatatagaccttgtatgagacaaaactttgagagatagagggggctgaaacaagggtttagaaag 39932090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 17186457 - 17186392
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||||  ||||||||||| |||| | ||||||||||||||||||| ||||||||| ||||    
T  17186457 ataaatatagattttgtatcagagcaaaccttgagatagagggggctgaaataagggtttagaaag 17186392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 705
Target Start/End: Complemental strand, 27339496 - 27339394
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttata 702  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||| ||  |||||||     ||||||||||||||||||||||||| ||| |    
T  27339496 atttgttccaaatttatgagttatacttttactataaatatagaccttgtattaggctaaactttgagagagatagagggggctgaaacaagggcttaga 27339397  T
Q  703 aag 705  Q
    |||    
T  27339396 aag 27339394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 684
Target Start/End: Original strand, 48665090 - 48665167
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagaggggg 684  Q
    ||||||||||||||| | ||  |||||||||| |||||||||||||||| |||||||||||| |  ||||||||||||    
T  48665090 atttgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaaccttaagatagaggggg 48665167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Complemental strand, 50077009 - 50076936
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| |||||||||||| ||||||||| |||||| | ||||||||  |||||||||||||| |||| ||||    
T  50077009 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaaagggctgaaacaaggatttagaaag 50076936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 587 - 662
Target Start/End: Complemental strand, 2393654 - 2393578
Alignment:
Q  587 gaaacgtatttttcagtggagatttgttccaaattttaagcgatacttt-tacgataaatatagaccttgtatcaga 662  Q
    |||||||||||||||||| |||||||||||| |||||||| |||| |||  || |||||||||  ||||||||||||    
T  2393654 gaaacgtatttttcagtgaagatttgttccatattttaagggatattttccactataaatataagccttgtatcaga 2393578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 720
Target Start/End: Complemental strand, 6115376 - 6115328
Alignment:
Q  672 gagatagagggggctgaaacaagggtttataaagcaaactagggtttgt 720  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  6115376 gagatagagggggctgaaacaagggtttagaaatcaaattagggtttgt 6115328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 705
Target Start/End: Original strand, 16428570 - 16428670
Alignment:
Q  606 agatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaa 704  Q
    |||||||||| || ||| |||| ||||||||||| ||||||||||   || |||||||| ||||    |||||||||||||||||||||||||||| |||    
T  16428570 agatttgttcgaattttataagggatacttttactataaatataggttttatatcagagcaaaccattagatagagggggctgaaacaagggtttagaaa 16428669  T
Q  705 g 705  Q
    |    
T  16428670 g 16428670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 700
Target Start/End: Original strand, 18839531 - 18839599
Alignment:
Q  632 cttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||| |||||||||||| |||||| |  ||||||   |||||||||||||||||||||||||||||    
T  18839531 cttttactataaatatagacattgtattattgtaaaccatgagatagagggggctgaaacaagggttta 18839599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 668
Target Start/End: Original strand, 43104099 - 43104139
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcagagtaaac 668  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  43104099 gatacttttactataaatatagaccttgtatcagagtaaac 43104139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 695
Target Start/End: Complemental strand, 9241425 - 9241359
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagag-ggggctgaaacaagg 695  Q
    ||||||||| |||||||||| | |||||||||||||||| |  |||||||| |||||||||||||||    
T  9241425 tacttttactataaatataggctttgtatcagagtaaaccttaagatagaggggggctgaaacaagg 9241359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 640 - 698
Target Start/End: Original strand, 17324017 - 17324075
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtt 698  Q
    |||||||||||| |||||| ||||||||| | ||||||||| ||||| |||||||||||    
T  17324017 ataaatatagactttgtattagagtaaaccttgagatagagagggctaaaacaagggtt 17324075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 530
Target Start/End: Original strand, 39462258 - 39462339
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcacatttgtcgggcaacgtgtcacgattggatgttttagtt 530  Q
    |||||||||||||||||||| | ||| || |||||||||| |||| | || |||||||||| ||||||| || |||| ||||    
T  39462258 tgtgagagttaacttaaaatcaggttctgcagaaatcgtgacacaatggttgggcaacgtggcacgattagaggtttcagtt 39462339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 680
Target Start/End: Complemental strand, 46432090 - 46432017
Alignment:
Q  608 atttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||||||||||||| | ||  |||||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  46432090 atttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagag 46432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 700
Target Start/End: Complemental strand, 8349413 - 8349317
Alignment:
Q  606 agatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcaga-gtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||||||| ||| | || |||| |||||  ||||||||||| ||||||| ||| | |||| | ||||||||| |||||||||||||||||||    
T  8349413 agatttgttccaattttatgagggataattttattataaatatagatcttgtattagatgcaaaccttgagatagagagggctgaaacaagggttta 8349317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 640 - 684
Target Start/End: Complemental strand, 26520447 - 26520403
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagaggggg 684  Q
    |||||||||||| |||||||||||||||| | |||||||||||||    
T  26520447 ataaatatagactttgtatcagagtaaaccttgagatagaggggg 26520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 662
Target Start/End: Original strand, 46782939 - 46783029
Alignment:
Q  575 aggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgata---aatatagaccttgtatcaga 662  Q
    |||| ||||||||||| | | |||| |||| | ||||||||||||||||||| | ||||||||| |||   |||||| |||||||||||||    
T  46782939 aggcaaaaaacagaaatgcacttttaagtgcatatttgttccaaattttaagggttacttttactataaataatataaaccttgtatcaga 46783029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 705
Target Start/End: Original strand, 6756469 - 6756544
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||| | |||||||||||| ||||||| | |||||| | || ||||||||| |||||||||||| ||| ||||    
T  6756469 tacttttgctataaatatagacattgtatcggtgtaaaccttgaaatagaggggactgaaacaagggcttagaaag 6756544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 690
Target Start/End: Complemental strand, 15669732 - 15669669
Alignment:
Q  628 gatacttttacgataaatatagaccttgtatcaga-gtaaacttggagatagagggggctgaaa 690  Q
    ||||||||||| ||||||| |||||||||| |||| |||||| | | |||||||||||||||||    
T  15669732 gatacttttactataaatacagaccttgtagcagatgtaaacattgggatagagggggctgaaa 15669669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 492
Target Start/End: Original strand, 41646681 - 41646724
Alignment:
Q  449 tgtgagagttaacttaaaattatgttatggagaaatcgtggcac 492  Q
    |||||||||||||||||||| ||||| || ||||||||||||||    
T  41646681 tgtgagagttaacttaaaatcatgttctgcagaaatcgtggcac 41646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 49958963 - 49959018
Alignment:
Q  607 gatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcaga 662  Q
    |||||||||||||||||  | ||| ||||| | |||||||||||||||||||||||    
T  49958963 gatttgttccaaattttgtgggatgcttttgctataaatatagaccttgtatcaga 49959018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 640 - 698
Target Start/End: Complemental strand, 13125785 - 13125727
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtt 698  Q
    ||||||| | ||||||||||||||||||  | |||| | ||||||||||||||||||||    
T  13125785 ataaatagaaaccttgtatcagagtaaaacttgagagaaagggggctgaaacaagggtt 13125727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 680
Target Start/End: Complemental strand, 15295183 - 15295137
Alignment:
Q  634 tttacgataaatatagaccttgtatcagagtaaacttggagatagag 680  Q
    ||||| |||||||||||||||||||||||| |||||| |||| ||||    
T  15295183 tttactataaatatagaccttgtatcagagcaaactttgagagagag 15295137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 683
Target Start/End: Original strand, 16431018 - 16431096
Alignment:
Q  606 agatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggg 683  Q
    ||||||||||||| ||| | || ||||||||||| ||||||||||   ||||||||||| |||| | ||||||||||||    
T  16431018 agatttgttccaattttatgagggatacttttactataaatataggttttgtatcagagcaaaccttgagatagagggg 16431096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 27916415 - 27916469
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatca 660  Q
    ||||||||||||| |||  || ||||||||||| |||||||||||| ||||||||    
T  27916415 agatttgttccaattttggagggatacttttactataaatatagacattgtatca 27916469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 3873 - 4023
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |||| ||||||||||||  ||| ||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  3873 gtggcacgatggtgcgatggcagcgaataacataaacgtatttttgggtgcagatttgtttcaaattttaagcaatacttttactataaatatagacctt 3972  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  3973 gtatcagactaaactttgagatagagggggctgaaacaagggtttagaaag 4023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 2756 - 2906
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||| |||| ||||||||||||  ||| |||||||||||||||||||||||| |||||||| ||||||||||| |||    
T  2756 gtggcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagaactt 2855  T
Q  655 gtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  2856 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 2906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 560 - 693
Target Start/End: Original strand, 14900 - 15033
Alignment:
Q  560 acgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatc 659  Q
    ||||||||||| |||  ||||| ||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14900 acgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatc 14999  T
Q  660 agagtaaacttggagatagagggggctgaaacaa 693  Q
    |||| |||||| ||||||||||||||||||||||    
T  15000 agagcaaactttgagatagagggggctgaaacaa 15033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 547 - 705
Target Start/End: Complemental strand, 73446 - 73285
Alignment:
Q  547 gaaaaattgtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaata 646  Q
    |||||||||||| ||||||||| | |||  ||||||||||||||| ||||||   ||| ||||||||||||||||||||| ||||||||||| |||||||    
T  73446 gaaaaattgtggcacgatggtgtgctggcagcgaaaaacagaaacatattttgg-gtgcagatttgttccaaattttaagagatacttttactataaata 73348  T
Q  647 tagaccttgtatcagagtaaactt----ggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| ||||||| || ||||||     ||||||||||||||||||||||||||||| ||||    
T  73347 tagaccgtgtatcaaaggaaactttgagagagatagagggggctgaaacaagggtttagaaag 73285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 560 - 705
Target Start/End: Complemental strand, 69701 - 69553
Alignment:
Q  560 acgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatc 659  Q
    ||||||||| | |||  ||||||||||||||| ||||||   ||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  69701 acgatggtgtgctggcagcgaaaaacagaaacatattttgg-gtgcagatttgttccaaattttaagcgatacttttacaataaatatagaccttatatc 69603  T
Q  660 agagtaaactt----ggagatagagggggctgaaacaagggtttataaag 705  Q
    |||| ||||||     ||||||||||||||||||||||||||||| ||||    
T  69602 agagcaaactttgagagagatagagggggctgaaacaagggtttagaaag 69553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 555 - 705
Target Start/End: Original strand, 29037 - 29197
Alignment:
Q  555 gtggtacgatggtgcgttggaggcgaaaaacagaaacgtatttttcagtggagatttgttccaaattttaagcgatacttttacgataaatatagacctt 654  Q
    |||| ||||||||||| |||  ||||||||||||||| ||||||| |||| ||||||||| |||||||||||| | |||||||| |||||||||||||||    
T  29037 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaattttaagcaaaacttttactataaatatagacctt 29136  T
Q  655 gtatcagagtaaacttggaga----------tagagggggctgaaacaagggtttataaag 705  Q
    |||||||  ||||||| ||||          ||||||||||||||||||||||||| ||||    
T  29137 gtatcaggctaaactttgagagagagagagatagagggggctgaaacaagggtttaaaaag 29197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 41820 - 41745
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  41820 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaaag 41745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 606 - 700
Target Start/End: Original strand, 6126 - 6220
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    ||||||||| ||  ||||||||   |||||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  6126 agatttgttacagtttttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggttta 6220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 1168 - 1093
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||    
T  1168 tactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaaag 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 692
Target Start/End: Complemental strand, 11811 - 11748
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaaca 692  Q
    |||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  11811 atacttttactataaatatagaccttgaatcagagtaaacctggagatagagggggctgaaaca 11748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 605 - 700
Target Start/End: Complemental strand, 16181 - 16085
Alignment:
Q  605 gagatttgttccaaattt-taagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||||||| | || ||||||||||| |||||||||||  |||||||||||||||| |  |||||||||||| ||||| |||||||||    
T  16181 gagatttgttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagatagagggggttgaaataagggttta 16085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 51959 - 52032
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaactt--ggagatagagggggctgaaacaagggttta 700  Q
    |||||||||| ||||||||||||||||||||| | |||||||   |||||||||||||||||||||||||||||    
T  51959 atacttttactataaatatagaccttgtatcatactaaactttgagagatagagggggctgaaacaagggttta 52032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 630 - 705
Target Start/End: Complemental strand, 183976 - 183902
Alignment:
Q  630 tacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||| || ||||||||||||||||||||||||||||||| ||||||||  |||||||||||| |||||| ||||    
T  183976 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaaag 183902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 629 - 705
Target Start/End: Original strand, 79135 - 79211
Alignment:
Q  629 atacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||| ||||| |||||||||||||||| |||||||||||  | ||||||||||||||| ||||||||||||| ||||    
T  79135 atacctttactataaatatagaccttgaatcagagtaaaacttgagatagagggggctaaaacaagggtttagaaag 79211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 609 - 705
Target Start/End: Original strand, 79789 - 79885
Alignment:
Q  609 tttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttataaag 705  Q
    |||||||||| || | || ||| ||||||| ||||||||||   ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||    
T  79789 tttgttccaatttatgagggattcttttactataaatatagtttttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaag 79885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 641 - 700
Target Start/End: Complemental strand, 1958 - 1898
Alignment:
Q  641 taaatatagaccttgtatcaga-gtaaacttggagatagagggggctgaaacaagggttta 700  Q
    |||||||||||||||||||||| |||||| | |||||||||| ||||||||||||||||||    
T  1958 taaatatagaccttgtatcagatgtaaacctagagatagaggtggctgaaacaagggttta 1898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 640 - 690
Target Start/End: Original strand, 4775 - 4825
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaa 690  Q
    ||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  4775 ataaatatagaccttgtatcagagtaaaccttgagatagaggggtctgaaa 4825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 640 - 699
Target Start/End: Complemental strand, 16974 - 16914
Alignment:
Q  640 ataaatatagaccttgtatcagagtaaacttggagatagagggggctg-aaacaagggttt 699  Q
    ||||||||| ||||||||||||||||||| | |||||||||| ||||| ||||||||||||    
T  16974 ataaatataaaccttgtatcagagtaaaccttgagatagaggaggctgaaaacaagggttt 16914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 675
Target Start/End: Original strand, 22137 - 22206
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||||||||    
T  22137 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaacttggaga 22206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 675
Target Start/End: Original strand, 24412 - 24481
Alignment:
Q  606 agatttgttccaaattttaagcgatacttttacgataaatatagaccttgtatcagagtaaacttggaga 675  Q
    |||||||||  | |||||||||   |||||||| ||||||||||||||||||||| || |||||||||||    
T  24412 agatttgttatagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaacttggaga 24481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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