View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0737_low_34 (Length: 236)
Name: NF0737_low_34
Description: NF0737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0737_low_34 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 40968793 - 40968561
Alignment:
| Q |
4 |
gcttcaattggttaacatgtccaaggaaggtaacaactttgattgagtgaagtcatataagattaagaggacatatttgatttttgctcctaatgtttgt |
103 |
Q |
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| T |
40968793 |
gcttcaattggttaacatgtccaaggaaggtaacaactttgattgagtgaagtcatataagattaagaggacatatttgatttttgctcctaatgtttgt |
40968694 |
T |
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| Q |
104 |
tgataatctatggtgcaataaattcaggatttatcaactggttggcttgagtgtgaccctgacccaatttttaagccagagtacattccaatgccaggat |
203 |
Q |
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| T |
40968693 |
tgataatctatggtgcaataaattcaggatttatcaactggttggcttgagtgtgaccctgacccaatttttaagccagagtacattccaatgccaggat |
40968594 |
T |
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| Q |
204 |
ttgtttctcattgggtaagtgatgaatctttct |
236 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
40968593 |
ttgtttctcattgggtaagtgatgaatctttct |
40968561 |
T |
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