View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0738_high_16 (Length: 278)

Name: NF0738_high_16
Description: NF0738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0738_high_16
NF0738_high_16
[»] scaffold0044 (2 HSPs)
scaffold0044 (158-201)||(81808-81851)
scaffold0044 (158-201)||(65560-65603)
[»] chr2 (20 HSPs)
chr2 (160-201)||(26903355-26903396)
chr2 (157-201)||(42249477-42249521)
chr2 (155-196)||(20917517-20917558)
chr2 (158-201)||(24285696-24285739)
chr2 (158-201)||(24292372-24292415)
chr2 (158-201)||(34070626-34070669)
chr2 (155-197)||(15953098-15953140)
chr2 (157-197)||(14582924-14582964)
chr2 (158-197)||(15944583-15944622)
chr2 (158-197)||(17687424-17687463)
chr2 (158-197)||(20621518-20621557)
chr2 (157-192)||(25483600-25483635)
chr2 (157-192)||(25491206-25491241)
chr2 (158-197)||(35138593-35138632)
chr2 (158-197)||(35146929-35146968)
chr2 (158-197)||(41233870-41233909)
chr2 (158-191)||(20372345-20372378)
chr2 (157-197)||(38168383-38168423)
chr2 (157-197)||(44372704-44372744)
chr2 (157-197)||(44388615-44388655)
[»] chr3 (14 HSPs)
chr3 (157-201)||(30498-30542)
chr3 (158-201)||(8197718-8197761)
chr3 (158-197)||(2211239-2211278)
chr3 (158-196)||(17919199-17919237)
chr3 (158-197)||(16816230-16816268)
chr3 (158-197)||(17628265-17628304)
chr3 (158-197)||(17933655-17933694)
chr3 (162-201)||(18349560-18349599)
chr3 (158-197)||(50824352-50824391)
chr3 (158-197)||(50851469-50851508)
chr3 (158-192)||(14538636-14538670)
chr3 (158-192)||(27341366-27341400)
chr3 (158-191)||(28470249-28470282)
chr3 (157-197)||(18039010-18039050)
[»] scaffold0991 (1 HSPs)
scaffold0991 (158-201)||(395-438)
[»] chr8 (9 HSPs)
chr8 (158-201)||(4582204-4582247)
chr8 (156-197)||(25579838-25579879)
chr8 (156-197)||(30938280-30938321)
chr8 (157-197)||(17973564-17973604)
chr8 (157-197)||(26876080-26876120)
chr8 (158-197)||(26873630-26873669)
chr8 (157-191)||(17683828-17683862)
chr8 (158-191)||(17664672-17664705)
chr8 (157-197)||(1407099-1407139)
[»] chr1 (8 HSPs)
chr1 (158-201)||(21498920-21498963)
chr1 (157-197)||(35104090-35104130)
chr1 (158-197)||(29221514-29221553)
chr1 (158-197)||(31539954-31539993)
chr1 (158-197)||(31548523-31548562)
chr1 (158-201)||(52100017-52100060)
chr1 (157-195)||(20314055-20314093)
chr1 (156-197)||(44320218-44320259)
[»] scaffold0083 (1 HSPs)
scaffold0083 (156-197)||(15811-15852)
[»] scaffold0015 (1 HSPs)
scaffold0015 (158-198)||(192528-192568)
[»] chr4 (8 HSPs)
chr4 (157-197)||(10638327-10638367)
chr4 (157-197)||(27343717-27343757)
chr4 (156-193)||(12428508-12428545)
chr4 (157-197)||(8103114-8103154)
chr4 (158-197)||(8094308-8094347)
chr4 (158-197)||(12996476-12996515)
chr4 (158-197)||(52295604-52295643)
chr4 (157-191)||(21532336-21532370)
[»] scaffold0863 (1 HSPs)
scaffold0863 (158-201)||(394-437)
[»] scaffold0389 (1 HSPs)
scaffold0389 (158-201)||(416-459)
[»] scaffold0170 (1 HSPs)
scaffold0170 (158-197)||(7216-7255)
[»] chr6 (12 HSPs)
chr6 (158-196)||(13490193-13490231)
chr6 (28-69)||(17725778-17725819)
chr6 (157-197)||(23925334-23925374)
chr6 (157-197)||(30824555-30824595)
chr6 (158-197)||(5004061-5004100)
chr6 (158-197)||(5489145-5489184)
chr6 (158-197)||(5994699-5994738)
chr6 (158-197)||(11053702-11053741)
chr6 (158-197)||(25550295-25550334)
chr6 (158-197)||(35091702-35091741)
chr6 (157-197)||(11279836-11279876)
chr6 (157-197)||(25506567-25506607)
[»] scaffold0497 (1 HSPs)
scaffold0497 (156-197)||(10991-11032)
[»] scaffold0431 (1 HSPs)
scaffold0431 (156-193)||(137-174)
[»] scaffold0027 (1 HSPs)
scaffold0027 (158-191)||(65710-65743)
[»] scaffold0111 (1 HSPs)
scaffold0111 (157-197)||(33034-33074)
[»] scaffold0002 (1 HSPs)
scaffold0002 (157-197)||(121227-121267)
[»] chr7 (8 HSPs)
chr7 (157-197)||(12978454-12978494)
chr7 (158-197)||(4941603-4941642)
chr7 (158-197)||(13831500-13831539)
chr7 (158-197)||(18304418-18304457)
chr7 (157-196)||(30244774-30244813)
chr7 (157-196)||(30245567-30245606)
chr7 (157-196)||(30255412-30255450)
chr7 (158-192)||(10439937-10439971)
[»] chr5 (9 HSPs)
chr5 (157-197)||(31421788-31421828)
chr5 (161-201)||(41099798-41099838)
chr5 (157-192)||(19223554-19223589)
chr5 (158-197)||(20372939-20372978)
chr5 (158-197)||(20398661-20398700)
chr5 (158-197)||(23350102-23350141)
chr5 (158-197)||(24956872-24956911)
chr5 (158-197)||(24965335-24965374)
chr5 (157-191)||(29186310-29186344)
[»] scaffold0156 (1 HSPs)
scaffold0156 (158-197)||(35382-35421)
[»] scaffold0048 (1 HSPs)
scaffold0048 (158-197)||(7655-7694)
[»] scaffold0039 (1 HSPs)
scaffold0039 (157-192)||(40864-40899)
[»] scaffold0016 (1 HSPs)
scaffold0016 (158-197)||(23464-23503)
[»] scaffold0209 (1 HSPs)
scaffold0209 (156-197)||(110-151)


Alignment Details
Target: scaffold0044 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 81851 - 81808
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  81851 tgtcataccctaaattttgaccacttttctctatttttacacat 81808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 65603 - 65560
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||||||| ||||||||  |||||||||||||||||||||||    
T  65603 tgtcataccccaaattttgtacacttttctctatttttacacat 65560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 26903396 - 26903355
Alignment:
Q  160 tcataccctaaattttgaccacttttctctatttttacacat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26903396 tcataccctaaattttgaccacttttctctatttttacacat 26903355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 42249521 - 42249477
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  42249521 ttgtcataccccaaattttgaccacttttctctatttttacacat 42249477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 20917517 - 20917558
Alignment:
Q  155 ggttgtcataccctaaattttgaccacttttctctattttta 196  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  20917517 ggttgtcatactctaaattttgaccacttttctctattttta 20917558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 24285696 - 24285739
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  24285696 tgtcataccccaaattttgaccacttttctttatttttacacat 24285739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 24292372 - 24292415
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  24292372 tgtcataccccaaattttgaccacttttctttatttttacacat 24292415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 34070669 - 34070626
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  34070669 tgtcataccccaaattttgatcacttttctctatttttacacat 34070626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 15953140 - 15953098
Alignment:
Q  155 ggttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  15953140 ggttgtcataccccaaattttgaccacttttctctattcttac 15953098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 14582924 - 14582964
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  14582924 ttgtcataccccaaattttgaccacttttctctattcttac 14582964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 15944622 - 15944583
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  15944622 tgtcataccccaaattttgaccacttttctctattcttac 15944583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 17687463 - 17687424
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  17687463 tgtcataccccaaattttgaccacttttctctattcttac 17687424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 20621518 - 20621557
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  20621518 tgtcataccccaaattttgaccacttttctctattcttac 20621557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 192
Target Start/End: Original strand, 25483600 - 25483635
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatt 192  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25483600 ttgtcataccccaaattttgaccacttttctctatt 25483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 192
Target Start/End: Original strand, 25491206 - 25491241
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatt 192  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25491206 ttgtcataccccaaattttgaccacttttctctatt 25491241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 35138593 - 35138632
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  35138593 tgtcataccccaaattttgaccacttttctctattcttac 35138632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 35146929 - 35146968
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  35146929 tgtcataccccaaattttgaccacttttctctattcttac 35146968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 41233909 - 41233870
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  41233909 tgtcataccccaaattttgaccacttttctctattcttac 41233870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 20372378 - 20372345
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctat 191  Q
    |||||||||| |||||||||||||||||||||||    
T  20372378 tgtcataccccaaattttgaccacttttctctat 20372345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 38168423 - 38168383
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||| | |||||||||||||||||||||||| ||||    
T  38168423 ttgtcatactccaaattttgaccacttttctctattcttac 38168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 44372704 - 44372744
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| ||||||||||||||||| ||||| |||||    
T  44372704 ttgtcataccccaaattttgaccacttttttctatctttac 44372744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 44388615 - 44388655
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| ||||||||||||||||| ||||| |||||    
T  44388615 ttgtcataccccaaattttgaccacttttttctatctttac 44388655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 30542 - 30498
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  30542 ttgtcataccccaaattttgaccacttttctctatttttacacat 30498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 8197761 - 8197718
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  8197761 tgtcataccccaaattttgaccacttttctctatttttacacat 8197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 2211239 - 2211278
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  2211239 tgtcataccctaaattttgaccacttttctctattcttac 2211278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 17919199 - 17919237
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctattttta 196  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  17919199 tgtcataccccaaattttgaccacttttctctattttta 17919237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 16816268 - 16816230
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  16816268 tgtcataccc-aaattttgaccacttttctctatttttac 16816230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 17628265 - 17628304
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  17628265 tgtcataccccaaattttgaccacttttctctattcttac 17628304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 17933655 - 17933694
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  17933655 tgtcataccccaaattttgaccaattttctctatttttac 17933694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 18349560 - 18349599
Alignment:
Q  162 ataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  18349560 ataccccaaattttgacaacttttctctatttttacacat 18349599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 50824352 - 50824391
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  50824352 tgtcataccccaaattttgaccacttttctctattcttac 50824391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 50851508 - 50851469
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  50851508 tgtcataccccaaattttgaccacttttctctattcttac 50851469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 14538670 - 14538636
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatt 192  Q
    |||||||||| ||||||||||||||||||||||||    
T  14538670 tgtcataccccaaattttgaccacttttctctatt 14538636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 27341400 - 27341366
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatt 192  Q
    |||||||||| ||||||||||||||||||||||||    
T  27341400 tgtcataccccaaattttgaccacttttctctatt 27341366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 28470282 - 28470249
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctat 191  Q
    |||||||||| |||||||||||||||||||||||    
T  28470282 tgtcataccccaaattttgaccacttttctctat 28470249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 18039010 - 18039050
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| ||||||||||||||||||||  |||||||    
T  18039010 ttgtcataccccaaattttgaccacttttctcgctttttac 18039050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 438 - 395
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  438 tgtcataccccaaattttgaccacttttctctatttttacacat 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 4582204 - 4582247
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  4582204 tgtcataccttaaattttgaccacttttctctatttttacacat 4582247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 25579879 - 25579838
Alignment:
Q  156 gttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  25579879 gttgtcataccctaaattttgaccacttttatctattcttac 25579838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 30938280 - 30938321
Alignment:
Q  156 gttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  30938280 gttgtcataccccaaattttgaccacttttctctattcttac 30938321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 17973564 - 17973604
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  17973564 ttgtcataccccaaattttgaccacttttctctattcttac 17973604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 26876120 - 26876080
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  26876120 ttgtcataccccaaattttgaccacttttctctattcttac 26876080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 26873669 - 26873630
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  26873669 tgtcataccccaaattttgaccacttttctctattcttac 26873630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 17683862 - 17683828
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctat 191  Q
    ||||||||||| |||||||||||||||||||||||    
T  17683862 ttgtcataccccaaattttgaccacttttctctat 17683828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 17664705 - 17664672
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctat 191  Q
    |||||||||| |||||||||||||||||||||||    
T  17664705 tgtcataccccaaattttgaccacttttctctat 17664672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 1407139 - 1407099
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||| ||||||| ||||    
T  1407139 ttgtcataccccaaattttgaccactttcctctattcttac 1407099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 21498963 - 21498920
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  21498963 tgtcataccccaaattttgaccacttttctctatttttacacat 21498920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 35104130 - 35104090
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  35104130 ttgtcataccccaaattttgaccacttttctctattcttac 35104090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 29221553 - 29221514
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  29221553 tgtcataccccaaattttgactacttttctctatttttac 29221514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 31539954 - 31539993
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  31539954 tgtcataccccaaattttgaccacttttctctattcttac 31539993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 31548523 - 31548562
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  31548523 tgtcataccccaaattttgaccacttttctctattcttac 31548562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 52100017 - 52100060
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||    
T  52100017 tgtcatatcctaaattttgaccatttttctctgtttttacacat 52100060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 20314093 - 20314055
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctattttt 195  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  20314093 ttgtcataccccaaattttgaccacttttttctattttt 20314055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 44320259 - 44320218
Alignment:
Q  156 gttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||||| ||||||||||||||||||||  |||||||    
T  44320259 gttgtcataccccaaattttgaccacttttctcgctttttac 44320218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 15811 - 15852
Alignment:
Q  156 gttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  15811 gttgtcataccccaaattttgaccacttttctctatttttac 15852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 192528 - 192568
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttaca 198  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  192528 tgtcataccccaaattttgaccacttttctctatttttaca 192568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 10638327 - 10638367
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  10638327 ttgtcataccccaaattttgaccacttttctctatttttac 10638367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 27343757 - 27343717
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  27343757 ttgtcataccccaaattttgaccacttttctctatttttac 27343717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 12428545 - 12428508
Alignment:
Q  156 gttgtcataccctaaattttgaccacttttctctattt 193  Q
    |||||||||||| |||||||||||||||||||||||||    
T  12428545 gttgtcataccccaaattttgaccacttttctctattt 12428508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 8103154 - 8103114
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  8103154 ttgtcataccccaaattttgaccacttttctctattcttac 8103114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 8094347 - 8094308
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  8094347 tgtcataccccaaattttgaccacttttctctattcttac 8094308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 12996476 - 12996515
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  12996476 tgtcataccccaaattttgaccacttttctctattcttac 12996515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 52295604 - 52295643
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  52295604 tgtcataccccaaattttgaccacttttctctattcttac 52295643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 21532370 - 21532336
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctat 191  Q
    ||||||||||| |||||||||||||||||||||||    
T  21532370 ttgtcataccccaaattttgaccacttttctctat 21532336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 437 - 394
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  437 tgtcataccccaaattttgaccacttttctttatttttacacat 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 416 - 459
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttacacat 201  Q
    |||||||||||||||||||||||||||||| || ||||||||||    
T  416 tgtcataccctaaattttgaccacttttctttaattttacacat 459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 7255 - 7216
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  7255 tgtcataccctaaattttgaccacttttctctgtttttac 7216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 13490193 - 13490231
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctattttta 196  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  13490193 tgtcataccccaaattttgaccacttttctctattttta 13490231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 17725778 - 17725819
Alignment:
Q  28 caacagaagccaagaagcatgctcaaccgaaaagaacatcaa 69  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  17725778 caacagaagccaagaagcatgcccaaccgaaaagagcatcaa 17725819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 23925334 - 23925374
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  23925334 ttgtcataccccaaattttgaccacttttctctattcttac 23925374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 30824595 - 30824555
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  30824595 ttgtcataccccaaattttgaccacttttctctattcttac 30824555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 5004061 - 5004100
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  5004061 tgtcataccccaaattttgaccacttttctctattcttac 5004100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 5489184 - 5489145
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  5489184 tgtcataccccaaattttgaccacttttctctattcttac 5489145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 5994699 - 5994738
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  5994699 tgtcataccccaaattttgaccacttttctctattcttac 5994738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 11053702 - 11053741
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  11053702 tgtcataccccaaattttgaccacttttttctatttttac 11053741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 25550295 - 25550334
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  25550295 tgtcataccccaaattttgaccacttttctctattcttac 25550334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 35091741 - 35091702
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  35091741 tgtcataccccaaattttgaccacttttctctattcttac 35091702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 11279836 - 11279876
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||| ||||||| ||||    
T  11279836 ttgtcataccccaaattttgaccactttcctctattcttac 11279876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 25506607 - 25506567
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| ||||||||| |||||||||||||| ||||    
T  25506607 ttgtcataccccaaattttgatcacttttctctattcttac 25506567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 10991 - 11032
Alignment:
Q  156 gttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  10991 gttgtcataccccaaattttgaccacttttctctattcttac 11032  T

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Target: scaffold0431 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 137 - 174
Alignment:
Q  156 gttgtcataccctaaattttgaccacttttctctattt 193  Q
    |||||||||||| |||||||||||||||||||||||||    
T  137 gttgtcataccccaaattttgaccacttttctctattt 174  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 65743 - 65710
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctat 191  Q
    ||||||||||||||||||||||||||||||||||    
T  65743 tgtcataccctaaattttgaccacttttctctat 65710  T

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Target: scaffold0111 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 33034 - 33074
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  33034 ttgtcataccccaaattttgaccacttttctctattcttac 33074  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 121227 - 121267
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  121227 ttgtcataccccaaattttgaccacttttctctattcttac 121267  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 12978454 - 12978494
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  12978454 ttgtcataccccaaattttgaccacttttctctattcttac 12978494  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 4941642 - 4941603
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  4941642 tgtcataccccaaattttgaccacttttctctattcttac 4941603  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 13831500 - 13831539
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  13831500 tgtcataccctaaattttgaccactttcctctattcttac 13831539  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 18304457 - 18304418
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  18304457 tgtcataccccaaattttgaccacttttctctattcttac 18304418  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 30244774 - 30244813
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctattttta 196  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  30244774 ttgtcatacctcaaattttgaccacttttctctattttta 30244813  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 30245567 - 30245606
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctattttta 196  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  30245567 ttgtcatacccaaatttttgaccacttttctctattttta 30245606  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 30255412 - 30255450
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctattttta 196  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  30255412 ttgtcataccc-aaattttgaccacttttctctattttta 30255450  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Original strand, 10439937 - 10439971
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatt 192  Q
    |||||||||| ||||||||||||||||||||||||    
T  10439937 tgtcataccccaaattttgaccacttttctctatt 10439971  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 31421788 - 31421828
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  31421788 ttgtcatacccaaaattttgaccacttttctctattcttac 31421828  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 41099838 - 41099798
Alignment:
Q  161 cataccctaaattttgaccacttttctctatttttacacat 201  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  41099838 cataccccaaattttgaccacttttatctatttttacacat 41099798  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 192
Target Start/End: Original strand, 19223554 - 19223589
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatt 192  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19223554 ttgtcataccccaaattttgaccacttttctctatt 19223589  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 20372978 - 20372939
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  20372978 tgtcataccccaaattttgaccacttttctctattcttac 20372939  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 20398700 - 20398661
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  20398700 tgtcataccccaaattttgaccacttttctctattcttac 20398661  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 23350141 - 23350102
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  23350141 tgtcataccccaaattttgaccatttttctctatttttac 23350102  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 24956911 - 24956872
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  24956911 tgtcataccccaaattttgaccacttttctctattcttac 24956872  T

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Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 24965374 - 24965335
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  24965374 tgtcataccccaaattttgaccacttttctctattcttac 24965335  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 29186344 - 29186310
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctat 191  Q
    ||||||||||| |||||||||||||||||||||||    
T  29186344 ttgtcataccccaaattttgaccacttttctctat 29186310  T

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Target: scaffold0156 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 35421 - 35382
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  35421 tgtcataccccaaattttgaccacttttctctattcttac 35382  T

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Target: scaffold0048 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 7694 - 7655
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  7694 tgtcataccccaaattttgaccacttttctctattcttac 7655  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 40899 - 40864
Alignment:
Q  157 ttgtcataccctaaattttgaccacttttctctatt 192  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40899 ttgtcataccccaaattttgaccacttttctctatt 40864  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 23464 - 23503
Alignment:
Q  158 tgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  23464 tgtcataccccaaattttgaccacttttctctattcttac 23503  T

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Target: scaffold0209 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 151 - 110
Alignment:
Q  156 gttgtcataccctaaattttgaccacttttctctatttttac 197  Q
    |||||||||||| |||||||||||||||| ||||||| ||||    
T  151 gttgtcataccccaaattttgaccactttcctctattcttac 110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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