View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0738_low_29 (Length: 317)

Name: NF0738_low_29
Description: NF0738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0738_low_29
NF0738_low_29
[»] scaffold0023 (2 HSPs)
scaffold0023 (90-175)||(156103-156188)
scaffold0023 (118-162)||(85923-85967)
[»] chr7 (24 HSPs)
chr7 (90-175)||(2192526-2192611)
chr7 (90-175)||(16480756-16480841)
chr7 (90-175)||(7286248-7286333)
chr7 (90-151)||(2024853-2024914)
chr7 (90-151)||(15952803-15952864)
chr7 (92-175)||(11285538-11285621)
chr7 (118-162)||(369335-369379)
chr7 (118-169)||(32496220-32496271)
chr7 (118-169)||(11582609-11582660)
chr7 (118-169)||(13038883-13038934)
chr7 (118-169)||(16210154-16210205)
chr7 (118-169)||(16416692-16416743)
chr7 (92-169)||(18305517-18305594)
chr7 (120-169)||(36051040-36051089)
chr7 (118-169)||(122950-123001)
chr7 (118-163)||(7286160-7286205)
chr7 (118-175)||(7286198-7286255)
chr7 (92-169)||(12545479-12545556)
chr7 (92-169)||(13867762-13867839)
chr7 (99-160)||(7291079-7291142)
chr7 (118-169)||(3055164-3055215)
chr7 (98-165)||(7291152-7291219)
chr7 (118-175)||(11285490-11285547)
chr7 (118-163)||(15762191-15762236)
[»] chr5 (40 HSPs)
chr5 (90-175)||(1221558-1221643)
chr5 (90-175)||(10495-10580)
chr5 (90-175)||(11340959-11341044)
chr5 (90-175)||(43445628-43445713)
chr5 (93-175)||(19498127-19498208)
chr5 (90-163)||(22368269-22368342)
chr5 (99-175)||(10780056-10780134)
chr5 (93-169)||(17473626-17473701)
chr5 (99-175)||(9732536-9732614)
chr5 (90-151)||(16534699-16534760)
chr5 (90-151)||(18779894-18779955)
chr5 (90-151)||(29192485-29192546)
chr5 (118-162)||(10779965-10780009)
chr5 (112-165)||(11582229-11582282)
chr5 (118-175)||(18779996-18780053)
chr5 (118-175)||(25944510-25944567)
chr5 (90-151)||(35792954-35793015)
chr5 (118-175)||(35793056-35793113)
chr5 (93-169)||(21653126-21653202)
chr5 (120-168)||(22368392-22368440)
chr5 (118-169)||(11340781-11340832)
chr5 (118-169)||(25424846-25424897)
chr5 (93-160)||(34937810-34937877)
chr5 (94-160)||(21653183-21653249)
chr5 (118-168)||(22368442-22368492)
chr5 (118-175)||(110935-110991)
chr5 (118-163)||(25944417-25944462)
chr5 (90-169)||(110814-110893)
chr5 (118-169)||(11340831-11340882)
chr5 (118-169)||(29192621-29192672)
chr5 (90-151)||(10701-10761)
chr5 (90-151)||(25424972-25425032)
chr5 (107-160)||(34937776-34937829)
chr5 (101-165)||(25211722-25211786)
chr5 (101-165)||(25275874-25275938)
chr5 (118-169)||(35793112-35793163)
chr5 (118-168)||(1171275-1171325)
chr5 (118-168)||(28257969-28258019)
chr5 (118-175)||(16534573-16534630)
chr5 (118-163)||(17908031-17908076)
[»] chr2 (26 HSPs)
chr2 (90-175)||(12643732-12643817)
chr2 (90-173)||(3800865-3800948)
chr2 (91-175)||(12637914-12637998)
chr2 (90-175)||(21276263-21276347)
chr2 (118-169)||(20629092-20629143)
chr2 (118-169)||(461110-461161)
chr2 (118-169)||(3801073-3801124)
chr2 (118-169)||(8941894-8941945)
chr2 (118-169)||(19888687-19888738)
chr2 (90-144)||(25211253-25211307)
chr2 (118-169)||(3801023-3801074)
chr2 (118-169)||(9654565-9654616)
chr2 (118-169)||(24966661-24966712)
chr2 (118-169)||(34822497-34822548)
chr2 (118-169)||(34822547-34822598)
chr2 (118-169)||(38706760-38706811)
chr2 (107-160)||(7513797-7513850)
chr2 (90-151)||(8941994-8942054)
chr2 (118-175)||(25211075-25211132)
chr2 (107-160)||(42180144-42180197)
chr2 (118-154)||(22273338-22273374)
chr2 (118-154)||(22282571-22282607)
chr2 (122-169)||(461064-461111)
chr2 (92-169)||(15631809-15631886)
chr2 (101-163)||(24966620-24966682)
chr2 (90-151)||(19888526-19888586)
[»] scaffold0028 (2 HSPs)
scaffold0028 (90-175)||(90722-90807)
scaffold0028 (118-175)||(128699-128756)
[»] chr4 (27 HSPs)
chr4 (90-175)||(8372795-8372880)
chr4 (90-175)||(26678365-26678450)
chr4 (93-173)||(7134184-7134264)
chr4 (90-160)||(7134245-7134315)
chr4 (93-175)||(19998852-19998933)
chr4 (90-163)||(22356356-22356429)
chr4 (95-151)||(16521122-16521178)
chr4 (118-175)||(15211731-15211788)
chr4 (118-162)||(15274427-15274471)
chr4 (118-169)||(16520984-16521035)
chr4 (99-175)||(18167045-18167123)
chr4 (118-175)||(19998749-19998806)
chr4 (118-169)||(109928-109979)
chr4 (118-169)||(18246360-18246411)
chr4 (118-169)||(19998699-19998750)
chr4 (118-163)||(9293895-9293940)
chr4 (118-175)||(34393579-34393636)
chr4 (118-169)||(53909505-53909556)
chr4 (90-151)||(18246538-18246598)
chr4 (107-160)||(19699348-19699401)
chr4 (107-160)||(19709933-19709986)
chr4 (118-163)||(55378466-55378511)
chr4 (93-165)||(22356282-22356354)
chr4 (118-169)||(10642557-10642608)
chr4 (118-153)||(15211697-15211732)
chr4 (118-160)||(22356335-22356377)
chr4 (141-175)||(47355697-47355731)
[»] chr3 (31 HSPs)
chr3 (90-175)||(16819229-16819314)
chr3 (90-175)||(11812989-11813074)
chr3 (90-175)||(7852030-7852115)
chr3 (92-160)||(9304543-9304611)
chr3 (90-151)||(16259436-16259497)
chr3 (118-175)||(18908861-18908918)
chr3 (90-151)||(49230604-49230665)
chr3 (118-169)||(2451209-2451260)
chr3 (118-169)||(2048506-2048557)
chr3 (93-175)||(8630234-8630317)
chr3 (118-169)||(10737004-10737055)
chr3 (118-169)||(19262676-19262727)
chr3 (118-169)||(22273216-22273267)
chr3 (98-165)||(30141256-30141323)
chr3 (118-169)||(33340288-33340339)
chr3 (118-169)||(45581281-45581332)
chr3 (118-164)||(11813148-11813194)
chr3 (90-160)||(19945019-19945091)
chr3 (125-169)||(17958071-17958115)
chr3 (118-169)||(11813278-11813329)
chr3 (118-169)||(19230498-19230549)
chr3 (118-169)||(23490951-23491002)
chr3 (118-169)||(49230428-49230479)
chr3 (118-169)||(49230478-49230529)
chr3 (90-151)||(18909039-18909099)
chr3 (90-151)||(22273394-22273454)
chr3 (107-163)||(54049606-54049662)
chr3 (118-169)||(25057218-25057269)
chr3 (93-163)||(30141227-30141297)
chr3 (90-151)||(2451074-2451134)
chr3 (118-175)||(7851930-7851987)
[»] chr8 (29 HSPs)
chr8 (90-175)||(13664470-13664555)
chr8 (90-175)||(13723745-13723830)
chr8 (90-175)||(23509256-23509341)
chr8 (99-173)||(3433328-3433403)
chr8 (118-175)||(22008299-22008356)
chr8 (118-169)||(3433485-3433536)
chr8 (118-169)||(22008214-22008265)
chr8 (118-169)||(29758739-29758790)
chr8 (118-169)||(43375260-43375311)
chr8 (93-163)||(22909226-22909296)
chr8 (93-169)||(24719151-24719227)
chr8 (118-169)||(3433435-3433486)
chr8 (118-169)||(13664371-13664422)
chr8 (118-169)||(13723646-13723697)
chr8 (118-169)||(28836162-28836213)
chr8 (93-163)||(24719205-24719275)
chr8 (107-160)||(18610633-18610686)
chr8 (118-163)||(41508883-41508928)
chr8 (93-165)||(24108371-24108443)
chr8 (118-153)||(24387378-24387413)
chr8 (118-160)||(22909277-22909319)
chr8 (107-160)||(16041312-16041365)
chr8 (107-160)||(16042988-16043041)
chr8 (90-163)||(24108397-24108470)
chr8 (93-161)||(16041263-16041331)
chr8 (93-161)||(16042939-16043007)
chr8 (99-152)||(22909309-22909364)
chr8 (99-160)||(24108424-24108487)
chr8 (118-154)||(24930792-24930828)
[»] chr6 (28 HSPs)
chr6 (90-175)||(23975897-23975982)
chr6 (90-163)||(18579022-18579095)
chr6 (90-175)||(33316331-33316418)
chr6 (99-175)||(18004801-18004879)
chr6 (92-175)||(18128529-18128612)
chr6 (93-163)||(18128700-18128770)
chr6 (118-169)||(4989170-4989221)
chr6 (118-169)||(16827767-16827818)
chr6 (118-175)||(16827711-16827768)
chr6 (90-169)||(4989270-4989349)
chr6 (118-169)||(19984865-19984916)
chr6 (118-169)||(25173700-25173751)
chr6 (92-169)||(16827589-16827666)
chr6 (101-169)||(13622858-13622926)
chr6 (93-165)||(18843614-18843686)
chr6 (93-163)||(18128628-18128698)
chr6 (118-163)||(18004716-18004761)
chr6 (118-159)||(18128605-18128646)
chr6 (107-160)||(19627703-19627756)
chr6 (107-160)||(35011058-35011111)
chr6 (93-165)||(18825553-18825625)
chr6 (118-169)||(16238817-16238868)
chr6 (93-163)||(18128676-18128746)
chr6 (93-160)||(18825606-18825675)
chr6 (118-163)||(1554139-1554184)
chr6 (90-151)||(25173910-25173970)
chr6 (92-169)||(35017377-35017454)
chr6 (147-175)||(14628362-14628390)
[»] scaffold0195 (2 HSPs)
scaffold0195 (90-175)||(19741-19826)
scaffold0195 (90-161)||(17711-17782)
[»] scaffold0483 (3 HSPs)
scaffold0483 (90-160)||(4573-4643)
scaffold0483 (93-160)||(4524-4592)
scaffold0483 (119-169)||(4413-4463)
[»] scaffold0109 (3 HSPs)
scaffold0109 (90-160)||(49413-49483)
scaffold0109 (93-160)||(49364-49432)
scaffold0109 (119-169)||(49253-49303)
[»] scaffold0125 (1 HSPs)
scaffold0125 (90-160)||(29851-29921)
[»] scaffold0077 (1 HSPs)
scaffold0077 (90-169)||(21559-21638)
[»] scaffold0315 (1 HSPs)
scaffold0315 (90-151)||(16982-17043)
[»] scaffold0269 (4 HSPs)
scaffold0269 (90-163)||(498-571)
scaffold0269 (92-163)||(3296-3367)
scaffold0269 (125-169)||(3400-3444)
scaffold0269 (118-163)||(3346-3391)
[»] scaffold0034 (4 HSPs)
scaffold0034 (90-163)||(77840-77913)
scaffold0034 (92-176)||(36087-36171)
scaffold0034 (118-169)||(36163-36214)
scaffold0034 (118-175)||(36039-36096)
[»] chr1 (21 HSPs)
chr1 (90-151)||(15863139-15863200)
chr1 (118-175)||(22352467-22352524)
chr1 (118-175)||(15863269-15863326)
chr1 (118-169)||(20444185-20444236)
chr1 (118-169)||(37846140-37846191)
chr1 (92-175)||(41217736-41217819)
chr1 (118-169)||(17147002-17147053)
chr1 (118-169)||(20529949-20530000)
chr1 (92-163)||(20589852-20589923)
chr1 (118-169)||(20895464-20895515)
chr1 (118-169)||(22352572-22352623)
chr1 (92-163)||(41217864-41217935)
chr1 (117-175)||(20589790-20589848)
chr1 (118-169)||(22365126-22365177)
chr1 (117-163)||(20252557-20252603)
chr1 (90-151)||(17147128-17147188)
chr1 (118-163)||(20529925-20529970)
chr1 (118-154)||(44036576-44036612)
chr1 (93-163)||(20252581-20252651)
chr1 (118-163)||(20589752-20589797)
chr1 (118-154)||(20929925-20929961)
[»] scaffold0384 (1 HSPs)
scaffold0384 (90-165)||(142-217)
[»] scaffold0383 (6 HSPs)
scaffold0383 (90-151)||(762-823)
scaffold0383 (92-175)||(5544-5627)
scaffold0383 (118-175)||(610-667)
scaffold0383 (118-169)||(5674-5725)
scaffold0383 (118-158)||(510-550)
scaffold0383 (118-169)||(560-611)
[»] scaffold0292 (2 HSPs)
scaffold0292 (92-163)||(17976-18047)
scaffold0292 (132-175)||(17942-17985)
[»] scaffold0044 (4 HSPs)
scaffold0044 (92-163)||(94544-94615)
scaffold0044 (118-163)||(94666-94711)
scaffold0044 (93-163)||(94593-94663)
scaffold0044 (101-163)||(94625-94687)
[»] scaffold0032 (2 HSPs)
scaffold0032 (90-151)||(109789-109850)
scaffold0032 (120-175)||(109945-110000)
[»] scaffold0597 (1 HSPs)
scaffold0597 (118-169)||(2849-2900)
[»] scaffold0447 (4 HSPs)
scaffold0447 (92-175)||(2680-2763)
scaffold0447 (92-175)||(2808-2891)
scaffold0447 (92-175)||(2936-3019)
scaffold0447 (118-169)||(3066-3117)
[»] scaffold0342 (1 HSPs)
scaffold0342 (98-160)||(2399-2462)
[»] scaffold0039 (2 HSPs)
scaffold0039 (92-175)||(21078-21161)
scaffold0039 (118-169)||(20980-21031)
[»] scaffold0009 (1 HSPs)
scaffold0009 (118-169)||(270514-270565)
[»] scaffold0049 (2 HSPs)
scaffold0049 (93-169)||(30940-31016)
scaffold0049 (92-163)||(30891-30962)
[»] scaffold0622 (2 HSPs)
scaffold0622 (92-175)||(7628-7711)
scaffold0622 (125-175)||(7765-7815)
[»] scaffold0335 (2 HSPs)
scaffold0335 (90-153)||(9872-9935)
scaffold0335 (93-143)||(9858-9908)
[»] scaffold0184 (5 HSPs)
scaffold0184 (98-165)||(33655-33722)
scaffold0184 (118-154)||(32863-32899)
scaffold0184 (118-160)||(33603-33645)
scaffold0184 (93-163)||(33626-33696)
scaffold0184 (99-152)||(33558-33613)
[»] scaffold0130 (1 HSPs)
scaffold0130 (118-169)||(31302-31353)
[»] scaffold0078 (5 HSPs)
scaffold0078 (98-165)||(39122-39189)
scaffold0078 (118-154)||(39945-39981)
scaffold0078 (93-163)||(39148-39218)
scaffold0078 (118-160)||(39199-39241)
scaffold0078 (99-152)||(39231-39286)
[»] scaffold0025 (2 HSPs)
scaffold0025 (118-169)||(144979-145030)
scaffold0025 (118-169)||(147238-147289)
[»] scaffold0011 (4 HSPs)
scaffold0011 (118-169)||(125067-125118)
scaffold0011 (118-169)||(72086-72137)
scaffold0011 (118-169)||(76467-76518)
scaffold0011 (118-169)||(192948-192999)
[»] scaffold0003 (2 HSPs)
scaffold0003 (118-169)||(5404-5455)
scaffold0003 (118-154)||(217420-217456)
[»] scaffold0434 (1 HSPs)
scaffold0434 (118-169)||(3100-3151)
[»] scaffold0218 (1 HSPs)
scaffold0218 (118-169)||(6884-6935)
[»] scaffold0191 (2 HSPs)
scaffold0191 (118-169)||(396-447)
scaffold0191 (101-163)||(426-488)
[»] scaffold0467 (1 HSPs)
scaffold0467 (118-163)||(11700-11745)
[»] scaffold0001 (1 HSPs)
scaffold0001 (92-160)||(166123-166191)
[»] scaffold0106 (1 HSPs)
scaffold0106 (118-169)||(39973-40024)
[»] scaffold0066 (1 HSPs)
scaffold0066 (118-169)||(52614-52665)
[»] scaffold0138 (1 HSPs)
scaffold0138 (93-163)||(26689-26759)
[»] scaffold0134 (1 HSPs)
scaffold0134 (141-175)||(25727-25761)
[»] scaffold0346 (1 HSPs)
scaffold0346 (118-163)||(15891-15936)
[»] scaffold0132 (1 HSPs)
scaffold0132 (118-154)||(41160-41196)
[»] scaffold0004 (1 HSPs)
scaffold0004 (118-154)||(197772-197808)


Alignment Details
Target: scaffold0023 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 156188 - 156103
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  156188 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 156103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 85967 - 85923
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcaca 162  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  85967 catgaataatcattaatcacatttcatgaacagtcaccaatcaca 85923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 2192611 - 2192526
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2192611 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 2192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 16480841 - 16480756
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| ||||||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  16480841 acatcatgaacaatcaccaatcataagtcataaacaatcattaatcatacttcaagaacaatcaccaatcacatgtatcaggaaca 16480756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 7286333 - 7286248
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||| ||||| |||||    
T  7286333 acatcatgaacaatcaccaatcataagtcatgaacaatcattaatcatatttcatgaataatcaccaaccacatttatcatgaaca 7286248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 2024853 - 2024914
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2024853 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaat 2024914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 15952864 - 15952803
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15952864 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaat 15952803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 11285538 - 11285621
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||| |||||||| ||||||||  ||||||| |||||||||||| |||||||||||||||||||| ||||| ||||| |||||    
T  11285538 atcatgaacaatcatcaatcatattccatgaacaatcattaatcacatttcatgaacaatcaccaaccacatttatcatgaaca 11285621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 369335 - 369379
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcaca 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  369335 catgaataatcattaatcatatttcatgaacaatcaccaatcaca 369379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 32496271 - 32496220
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  32496271 catgaataatcattaatcacatttcatgaacaatcaccaatcacatatatca 32496220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 11582660 - 11582609
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  11582660 catgaacaatcattaatcacatttcatgaacaatcaccaatcacatatatca 11582609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 13038934 - 13038883
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  13038934 catgaacaatcattaatcacatttcatgaacaatcaccaatcacatatatca 13038883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 16210154 - 16210205
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  16210154 catgaataatcattaatcacatttcatgaacaatcacaaatcacatatatca 16210205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 16416692 - 16416743
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  16416692 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 16416743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 18305594 - 18305517
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||| ||||||||||||| |||  ||||||| | |||||||||| ||||||| |||||||||||| ||||| |||||    
T  18305594 atcatgaacaatcaccaattatattccatgaacattcattaatcacatttcataaacaatcaccaaccacatatatca 18305517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 36051040 - 36051089
Alignment:
Q  120 tgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  36051040 tgaataatcattaatcacatttcatgaacagtcaccaatcacatatatca 36051089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 122950 - 123001
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||| |||||    
T  122950 catgaataatcattactcacatttcatgaacaatccccaatcacatatatca 123001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 7286205 - 7286160
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||    
T  7286205 catgaacaatcattaatcacatttcatgaacaatcaccaaccacat 7286160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 7286255 - 7286198
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||| |||||| ||||||||| |||||||||||||||| ||||| ||||| |||||    
T  7286255 catgaacaatcatcaatcatattccatgaacaatcaccaaccacatttatcatgaaca 7286198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 12545556 - 12545479
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||| |||||||  ||||||||   |||||| | |||||||||| |||||||||||||||||||| ||||| |||||    
T  12545556 atcatgaacaatcctcaatcatatttcatgaacagtcattaatcacatttcatgaacaatcaccaaccacatttatca 12545479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 13867839 - 13867762
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||| |||||||| ||||||||   |||||| |||||  ||||| |||||||||||||||||||| ||||| |||||    
T  13867839 atcatgaacaatcatcaatcatatttcatgaacaatcagcaatcacatttcatgaacaatcaccaaccacatatatca 13867762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 7291079 - 7291142
Alignment:
Q  99 acaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||||||||||  |  || ||| |||||||||||| |||||||||||||||||||||||    
T  7291079 acaatcaccaatcatatacatcaagaacaatcattaatcacatttcatgaacaatcaccaatca 7291142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 3055164 - 3055215
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||| ||| |||| ||||||||||||||||||||| |||||    
T  3055164 catgaatagtcattagtcacattttatgaacaatcaccaatcacatatatca 3055215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 7291152 - 7291219
Alignment:
Q  98 aacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    ||||| |||||||||||  ||||||| | || ||||||| |||||||| ||||||| |||||||||||    
T  7291152 aacaaccaccaatcatattccatgaacattcgttaatcacatttcatggacaatcatcaatcacatgt 7291219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 11285490 - 11285547
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||| |||| | ||||||||||||||||||||||  |||||||| ||||| |||||    
T  11285490 catgaacaatcctcaatcatatttcatgaacaatcattaatcacatttatcatgaaca 11285547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 15762236 - 15762191
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||||||||||||  |||||||||||||||| |||||    
T  15762236 catgaacaatcattaatcatatcccatgaacaatcaccaaccacat 15762191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 1221643 - 1221558
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1221643 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 1221558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 10495 - 10580
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10495 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcatgaaca 10580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 11340959 - 11341044
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11340959 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccattcacatgtatcaggaaca 11341044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 43445713 - 43445628
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43445713 acatcatgaacagtcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcgccaatcacatgtatcaggaaca 43445628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 19498127 - 19498208
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19498127 tcatgaacaatcacaaatcataagccatgaacaatcatta-tcatatttcatgaacaatcaccaatcacatgtatcaggaaca 19498208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 22368342 - 22368269
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22368342 acatcatgaacactcaccaatcctaagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacat 22368269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 10780134 - 10780056
Alignment:
Q  99 acaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||  |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10780134 acaatcaccaatcatatacatcatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 10780056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 17473701 - 17473626
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||| ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||    
T  17473701 tcatgaacaatcacaaatcataagccatgaacaatcatta-tcatatttcatgaacaatcaccaatcacatatatca 17473626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 9732614 - 9732536
Alignment:
Q  99 acaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||  |  |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9732614 acaatcaccaatcatatacatcatgaacagtcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 9732536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 16534699 - 16534760
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  16534699 acatcatgaacaatcaccaatcataagccatgcacaatcattaatcatatttcatgaacaat 16534760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 18779955 - 18779894
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18779955 acatcatgaacaatcaccaatcataagccatgcacaatcattaatcatatttcatgaacaat 18779894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 29192546 - 29192485
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||||||||    
T  29192546 acatcatgaacaatcaccaatcataagtcatgcacaatcattaatcatatttcatgaacaat 29192485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 10780009 - 10779965
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcaca 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10780009 catgaataatcattaatcatatttcatgaacaatcaccaatcaca 10779965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 11582229 - 11582282
Alignment:
Q  112 ataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  11582229 ataaaccatgaacaatcattaataatatttcatgaacaatcaccaatcacatgt 11582282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 18780053 - 18779996
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||||| ||||||||||||||||||||| || ||||||| |||||    
T  18780053 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatcatgaaca 18779996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 25944567 - 25944510
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||    
T  25944567 catgaataataattaatcacatttcatgaacaatcaccaattacatgtatcatgaaca 25944510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 35793015 - 35792954
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||| |||||||||| | ||||||||| |||||||||||||||||    
T  35793015 acatcatgaacaatcaccaatgataagccatgcacaatcattaagcatatttcatgaacaat 35792954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 35793113 - 35793056
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||    
T  35793113 catgaataataattaatcacatttcatgaacaatcaccaattacatgtatcatgaaca 35793056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 21653202 - 21653126
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||| |||||||||||||||||   |||||| |||||  ||||| |||||||||||||||||||||||||| |||||    
T  21653202 tcatgaacaatcaccaatcatatttcatgaacaatcaccaatcacatttcatgaacaatcaccaatcacatttatca 21653126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 22368440 - 22368392
Alignment:
Q  120 tgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatc 168  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  22368440 tgaataatcattaatcacatttcatgaacaatcaccaattacatgtatc 22368392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 11340781 - 11340832
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  11340781 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 11340832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 25424846 - 25424897
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  25424846 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 25424897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 34937810 - 34937877
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    |||| |||||||||||||||||||  ||||| |||||  ||||| |||||||||||||||||||||||    
T  34937810 tcatgaacaatcaccaatcataagttatgaacaatcaccaatcacatttcatgaacaatcaccaatca 34937877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 21653249 - 21653183
Alignment:
Q  94 catcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    |||||| |||||||||||| |   |||||| |||||||||||| |||||||||||||||||||||||    
T  21653249 catcaataatcaccaatcacatttcatgaacaatcattaatcacatttcatgaacaatcaccaatca 21653183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 22368492 - 22368442
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatc 168  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  22368492 catgaataatcattaatgacatttcatgaacaatcaccaattacatgtatc 22368442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 110991 - 110935
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||    
T  110991 catgaataatcattaatcacatttcatgaacaat-accaattacatgtatcatgaaca 110935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 25944462 - 25944417
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  25944462 catgaacaatcattaatcacatttcatgaacaatcaccaatcacat 25944417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 110893 - 110814
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||| |||||||||||||||||||||||||| | |||  ||| | ||||||||| ||| || || ||||||||||||    
T  110893 acatcatgaacaatcaccaatcataagccatgaacattcaccaattacatttcatgagcaaacatcattcacatgtatca 110814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 11340831 - 11340882
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |||||| |||||||||| |||||||||| ||||||||||    
T  11340831 catgaataatcactaatcacatttcatgaaaaatcaccaattacatgtatca 11340882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 29192672 - 29192621
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||||| |||| ||||||||||||||||||||| || |||||||    
T  29192672 catgaataatcattgatcacatttcatgaacaatcaccaattacttgtatca 29192621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 10701 - 10761
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||| |||||| ||||||||||||    
T  10701 acatcatgaacaatcaccaatcaaaagtcatgaacaatcatt-atcataattcatgaacaat 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 25424972 - 25425032
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||| |||||| ||||||||||||    
T  25424972 acatcatgaacaatcaccaatcaaaagtcatgaacaatcatt-atcataattcatgaacaat 25425032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 34937776 - 34937829
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  34937776 caatcatattccatgaacattcattaatcacatttcatgaacaatcaccaatca 34937829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 25211786 - 25211722
Alignment:
Q  101 aatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    ||||||||||||||  ||||||| | |||||||||| |||||||  ||||||| |||||||||||    
T  25211786 aatcaccaatcatattccatgaacattcattaatcacatttcatagacaatcatcaatcacatgt 25211722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 25275938 - 25275874
Alignment:
Q  101 aatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    ||||||||||||||  ||||||| | |||||||||| |||||||  ||||||| |||||||||||    
T  25275938 aatcaccaatcatattccatgaacattcattaatcacatttcatagacaatcatcaatcacatgt 25275874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 35793163 - 35793112
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||| |||||| | | ||||||||||    
T  35793163 catgaataatcattaatcacatttcatgaaaaatcacaatttacatgtatca 35793112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 1171325 - 1171275
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatc 168  Q
    ||||||||||||| ||||| ||||||| |||||||||||| ||||| ||||    
T  1171325 catgaataatcatcaatcacatttcataaacaatcaccaaccacatttatc 1171275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 28257969 - 28258019
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatc 168  Q
    |||||| |||| | |||||||||||||||||||||||||| ||||| ||||    
T  28257969 catgaacaatcctcaatcatatttcatgaacaatcaccaaccacatttatc 28258019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 16534573 - 16534630
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||||||||||||  ||||||| | |||||||||| | |||||||| |||||    
T  16534573 catgaataatcattaatcacgtttcatggaaaatcaccaattaaatgtatcatgaaca 16534630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 17908031 - 17908076
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||||||||||| | |||||||||||||||| |||||    
T  17908031 catgaacaatcattaatcatactccatgaacaatcaccaaccacat 17908076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 12643817 - 12643732
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12643817 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 12643732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 3800948 - 3800865
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaa 173  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3800948 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccattcacatgtatcaggaa 3800865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 12637998 - 12637914
Alignment:
Q  91 catcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12637998 catcatgaacagtcaccaatcttaagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 12637914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 21276347 - 21276263
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| ||||||||||| ||||||||||| || | || ||| |||||||||||||||||||||||||||||||||| |||||||    
T  21276347 acatcatgaacaatcaccactcataagccataaacattcgtta-tcatatttcatgaacaatcaccaatcacatgtattaggaaca 21276263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 20629143 - 20629092
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  20629143 catgaataatcattaatcacatttcatgaacaatcaccaatcacatatatca 20629092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 461110 - 461161
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  461110 catgaataatcattaatcacatctcatgaacaatcaccaatcacatatatca 461161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 3801124 - 3801073
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  3801124 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 3801073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 8941894 - 8941945
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  8941894 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 8941945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 19888738 - 19888687
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  19888738 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 19888687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 25211253 - 25211307
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcat 144  Q
    ||||||| ||||||||||||||| |||||||| | ||||||||||||||||||||    
T  25211253 acatcatgaacaatcaccaatcacaagccatgcacaatcattaatcatatttcat 25211307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 3801074 - 3801023
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |||||| |||||||||| |||||||||| ||||||||||    
T  3801074 catgaataatcactaatcacatttcatgaaaaatcaccaattacatgtatca 3801023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 9654616 - 9654565
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||| |||||    
T  9654616 catgaataatcattaataacatttcatgaacagtcaccaatcacatatatca 9654565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 24966661 - 24966712
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||| |||||    
T  24966661 catgaacaatcattaatcacatttcatgaataatcaccaatcacatatatca 24966712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 34822497 - 34822548
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || |||||||    
T  34822497 catgaataatcattaatcacatttcatgaacaatcacaaattacttgtatca 34822548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 34822547 - 34822598
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |||||| |||||||||| |||||||||| ||||||||||    
T  34822547 catgaataatcactaatcacatttcatgaaaaatcaccaattacatgtatca 34822598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 38706811 - 38706760
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||| |||||||||||||| || |||||||    
T  38706811 catgaataatcattaatcacatttcaggaacaatcaccaattacttgtatca 38706760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 7513850 - 7513797
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  7513850 caatcatattccatgaacattcattaatcacatttcatgaacaatcaccaatca 7513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 8941994 - 8942054
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||| |||||| ||||||||||||    
T  8941994 acatcatgaacaatcaccaatcaaaagtcatgaacaatcatt-atcataattcatgaacaat 8942054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 25211075 - 25211132
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||| |||||||| |||||||||||| |||||||| || ||||||| |||||    
T  25211075 catgaataattattaatcacatttcatgaacagtcaccaattacttgtatcatgaaca 25211132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 42180197 - 42180144
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  42180197 caatcatattccatgaacattcattaatcacatttcatgaacaatcaccaatca 42180144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 22273338 - 22273374
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22273338 catgaataatcattaatcacatttcatgaacaatcac 22273374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 22282571 - 22282607
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22282571 catgaataatcattaatcacatttcatgaacaatcac 22282607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 461064 - 461111
Alignment:
Q  122 aataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||| || ||||||| ||||||||||||||| |||||    
T  461064 aataatcattaatcacatctcatgaagaatcaccaatcacatttatca 461111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 15631809 - 15631886
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaa-tcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||| |||||||||||||||||  |||| | ||||||| || ||| |||| ||||||||||||||||||||| |||||    
T  15631809 atcatgaacaatcaccaatcatattccat-agtaatcatcaaatcacatttgatgaacaatcaccaatcacatttatca 15631886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 24966620 - 24966682
Alignment:
Q  101 aatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||||||||| |   ||||||||||||| ||||| ||||||||||||||||  ||||||||    
T  24966620 aatcaccaatcacatttcatgaataatcatcaatcacatttcatgaacaatcattaatcacat 24966682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 19888586 - 19888526
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||  ||| |||||| ||||||| |||||| ||||||||||||    
T  19888586 acatcatgaacaatcaccaatccaaagtcatgaacaatcatt-atcataattcatgaacaat 19888526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 90807 - 90722
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  90807 acatcatgaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtgtcatgaaca 90722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 128699 - 128756
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  128699 catgaataatcattaatcacatttcatgaacaatcaccaattacatgtatcatgaaca 128756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 6e-34; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 8372795 - 8372880
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8372795 acatcatgaacagtcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 8372880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 26678365 - 26678450
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26678365 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaattaccaatcacatgtatcaggaaca 26678450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 7134264 - 7134184
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaa 173  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7134264 tcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaa 7134184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 7134315 - 7134245
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7134315 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatca 7134245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 19998852 - 19998933
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||| ||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19998852 tcatgaacaatcgcaaatcataagccatgaacaatcatta-tcatatttcatgaacaatcaccaatcacatgtatcaggaaca 19998933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 22356429 - 22356356
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  22356429 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcattaatcacat 22356356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 16521122 - 16521178
Alignment:
Q  95 atcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16521122 atcaccaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaat 16521178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 15211731 - 15211788
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  15211731 catgaataatcattaatcacatttcatgaacaatcaccaattacatgtatcatgaaca 15211788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 15274471 - 15274427
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcaca 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15274471 catgaataatcattaatcatatttcatgaacaatcaccaatcaca 15274427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 16520984 - 16521035
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  16520984 catgaataatcattaatcacatttcatgaacaatcaccaattacatgtatca 16521035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 18167045 - 18167123
Alignment:
Q  99 acaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||  |  |||||| |||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  18167045 acaatcaccaatcatatacatcatgaacaatcaccaatcatatttcatgaacaatcaccaatcacatgtatcatgaaca 18167123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 19998749 - 19998806
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||||| |||||| |||||||||| |||||||||| ||||||||||||||||    
T  19998749 catgaataatcactaatcacatttcatgaaaaatcaccaattacatgtatcaggaaca 19998806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 109928 - 109979
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  109928 catgaatagtcattaatcacatttcatgaacaatcaccaatcacatatatca 109979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 18246360 - 18246411
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  18246360 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 18246411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 19998699 - 19998750
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  19998699 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 19998750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 9293895 - 9293940
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||    
T  9293895 catgaataatcattaatcacatttcacgaacaatcaccaatcacat 9293940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 34393579 - 34393636
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||| ||| |||||    
T  34393579 catgaacaatcctcaatcatatttcatgaacaatcaccaatcacatgtgtcatgaaca 34393636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 53909556 - 53909505
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||| |||||    
T  53909556 catgaacaatcattaatcacatttcatgaacattcaccaatcacatatatca 53909505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 18246538 - 18246598
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||| |||||| ||||||||||||    
T  18246538 acatcatgaacaatcaccaatcaaaagtcatgaacaatcatt-atcataattcatgaacaat 18246598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 19699401 - 19699348
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  19699401 caatcatattccatgaacattcattaatcacatttcatgaacaatcaccaatca 19699348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 19709986 - 19709933
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  19709986 caatcatattccatgaacattcattaatcacatttcatgaacaatcaccaatca 19709933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 55378511 - 55378466
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||    
T  55378511 catgaacaatcattaatcacatttcatgaacaatcaccaaccacat 55378466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 22356354 - 22356282
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    |||| |||||||||| |||||   ||||||| | |||||||||| |||||||| ||||||| |||||||||||    
T  22356354 tcatgaacaatcaccgatcatgttccatgaacattcattaatcacatttcatggacaatcatcaatcacatgt 22356282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 10642557 - 10642608
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||| | |||||| ||||||||||||||||||| |||||    
T  10642557 catgaatagtcattaattacatttcacgaacaatcaccaatcacatttatca 10642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 15211697 - 15211732
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatca 153  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15211697 catgaataatcattaatcacatttcatgaacaatca 15211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 22356377 - 22356335
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    |||||| |||||||||||| |||||||||||||||||| ||||    
T  22356377 catgaacaatcattaatcacatttcatgaacaatcaccgatca 22356335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 47355697 - 47355731
Alignment:
Q  141 tcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||||||||||||| ||||||||||||||    
T  47355697 tcatgaacaatcaccaatcatatgtatcaggaaca 47355731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 6e-34; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 16819229 - 16819314
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16819229 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaattaccaatcacatgtatcaggaaca 16819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 11812989 - 11813074
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  11812989 acatcatgaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaattacatgtttcatgaaca 11813074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 7852030 - 7852115
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | ||||| |||||    
T  7852030 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaaccacgtatatcatgaaca 7852115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 9304611 - 9304543
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||| | ||||||||||    
T  9304611 atcatgaacaatcaccaatcataagccatgaacaatcattaatcatttttcatgaaaattcaccaatca 9304543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 16259436 - 16259497
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  16259436 acatcatgaacaatcaccaatcataagccatgcacaatcattaagcatatttcatgaacaat 16259497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 18908861 - 18908918
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  18908861 catgaataatcattaatcacatttcatgaacaatcaccaattacatgtatcatgaaca 18908918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 49230604 - 49230665
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  49230604 acatcatgaacaatcaccaatcataagccatgcacgatcattaatcatatttcatgaacaat 49230665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 2451260 - 2451209
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  2451260 catgaataatcattaatcatatttcatgaacaatcaccaattacttgtatca 2451209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 2048506 - 2048557
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  2048506 catgaatagtcattaatcacatttcatgaacaatcaccaatcacatatatca 2048557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 8630234 - 8630317
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaa-tcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||| |||| ||||||||||||  |||||||||||||| || ||| |||||||||||||||||||| ||||| ||||| |||||    
T  8630234 tcatgaacactcaccaatcatattccatgaataatcatcaaatcacatttcatgaacaatcaccaaccacatttatcatgaaca 8630317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 10737004 - 10737055
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  10737004 catgaataatcaataatcacatttcatgaacaatcaccaatcacatatatca 10737055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 19262727 - 19262676
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  19262727 catgaatagtcattaatcacatttcatgaacaatcaccaatcacatatatca 19262676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 22273216 - 22273267
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  22273216 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 22273267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 30141256 - 30141323
Alignment:
Q  98 aacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    |||||||||||||||||  ||||||| | |||||||||| |||||||| ||||||| |||||||||||    
T  30141256 aacaatcaccaatcatattccatgaacattcattaatcacatttcatggacaatcatcaatcacatgt 30141323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 33340288 - 33340339
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||||||| || |||||||||||||||||||||||||| |||||    
T  33340288 catgaataatcattaaccacatttcatgaacaatcaccaatcacatatatca 33340339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 45581281 - 45581332
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  45581281 catgaatagtcattaatcacatttcatgaacaatcaccaatcacatatatca 45581332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 11813148 - 11813194
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatg 164  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||    
T  11813148 catgaatagtcattaatcacatttcatgaacaatcaccaatcacatg 11813194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 19945019 - 19945091
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatat--ttcatgaacaatcaccaatca 160  Q
    ||||||| |||||||||||||||||||||||||| |||||  ||||||||   ||||||||||||||| ||||    
T  19945019 acatcatgaacaatcaccaatcataagccatgaacaatcaccaatcatatacatcatgaacaatcaccgatca 19945091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 17958115 - 17958071
Alignment:
Q  125 aatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||    
T  17958115 aatcattaatcatatttcatgaacaatcatcaatcacatatatca 17958071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 11813278 - 11813329
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||| |||||    
T  11813278 catgaataattattaatcaaatttcatgaacaatcagcaatcacatttatca 11813329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 19230498 - 19230549
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||| |||||    
T  19230498 catgaataatcattaatcacatttcatgaatattcaccaatcacatttatca 19230549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 23490951 - 23491002
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||| |||||    
T  23490951 catgaatagtcattaatcacatttcacgaacaatcaccaatcacatttatca 23491002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 49230428 - 49230479
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |||||| ||||||||||||||||||||| || |||||||    
T  49230428 catgaataatcaataatcacatttcatgaacaatcaccaattacttgtatca 49230479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 49230478 - 49230529
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |||||| |||||||||| |||||||||| ||||||||||    
T  49230478 catgaataatcactaatcacatttcatgaaaaatcaccaattacatgtatca 49230529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 18909039 - 18909099
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||| |||||| ||||||||||||    
T  18909039 acatcatgaacaatcaccaatcaaaagtcatgaacaatcatt-atcataattcatgaacaat 18909099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 22273394 - 22273454
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||| |||||| ||||||||||||    
T  22273394 acatcatgaacaatcaccaatcaaaagtcatgaacaatcatt-atcataattcatgaacaat 22273454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 54049662 - 54049606
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||||  ||||||| | |||||||||| ||||||| ||||||||||||||||||    
T  54049662 caatcatattccatgaacattcattaatcacatttcataaacaatcaccaatcacat 54049606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 25057218 - 25057269
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||| ||| |||||| ||||||||||||||||||| |||||    
T  25057218 catgaatagtcattagtcacatttcacgaacaatcaccaatcacatttatca 25057269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 30141227 - 30141297
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| |||||||||||||||||  ||||||| |||||  ||||||||| |||||||| |||  ||||||||    
T  30141227 tcatgaacaatcaccaatcatattccatgaacaatcaccaatcatattccatgaacattcattaatcacat 30141297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 2451134 - 2451074
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||| ||| ||||||  |||||| |||||| ||||||||||||    
T  2451134 acatcatgaacaatcaccaatcaaaagtcatgaaccatcatt-atcataattcatgaacaat 2451074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 7851930 - 7851987
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||| |||| | ||||||||||||||||||||||  |||||||||| ||| |||||    
T  7851930 catgaacaatcctcaatcatatttcatgaacaatcattaatcacatgtgtcatgaaca 7851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 13664555 - 13664470
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13664555 acatcatgaacaatcaccactcataagccatgaacaatcattaatcatatttcacgaacaatcaccaatcacatgtatcaggaaca 13664470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 13723830 - 13723745
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13723830 acatcatgaacaatcaccactcataagccatgaacaatcattaatcatatttcacgaacaatcaccaatcacatgtatcaggaaca 13723745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 23509256 - 23509341
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| || | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23509256 acatcatgaatattcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 23509341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 3433403 - 3433328
Alignment:
Q  99 acaatcaccaatcataagccatgaataa-tcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaa 173  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3433403 acaatcaccaatcataagccatgaacaaatcattaatcatatttcatgaacaatcaccattcacatgtatcaggaa 3433328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 22008356 - 22008299
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22008356 catgaacaatcattaatcatatttcatgaacaatcaccaattacatgtatcaggaaca 22008299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 3433536 - 3433485
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  3433536 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 3433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 22008265 - 22008214
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  22008265 catgaatagtcattaatcacatttcatgaacaatcaccaatcacatatatca 22008214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 29758739 - 29758790
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  29758739 catgaataatcattactcacatttcatgaacaatcaccaatcacatatatca 29758790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 43375311 - 43375260
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  43375311 catgaataatcattaatcacatttcatgaacagtcaccaatcacatatatca 43375260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 22909296 - 22909226
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| |||||||||||||||||  ||||||| | |||||||||| |||||||| ||||||| |||||||||    
T  22909296 tcatgaacaatcaccaatcatattccatgaacattcattaatcacatttcatggacaatcatcaatcacat 22909226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 24719227 - 24719151
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||| ||||||||||||||| |   |||||| |||||||||||| |||||||||||| |||||||||| || |||||    
T  24719227 tcatgaacaatcaccaatcacatttcatgaacaatcattaatcacatttcatgaacattcaccaatcatatatatca 24719151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 3433486 - 3433435
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |||||| |||||||||| |||||||||| ||||||||||    
T  3433486 catgaataatcactaatcacatttcatgaaaaatcaccaattacatgtatca 3433435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 13664422 - 13664371
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||| |||||    
T  13664422 catgaatagtcattaatcacatttcacgaacaatcaccaatcacatttatca 13664371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 13723697 - 13723646
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||| |||||    
T  13723697 catgaatagtcattaatcacatttcacgaacaatcaccaatcacatttatca 13723646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 28836162 - 28836213
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||| ||||| || |||||||    
T  28836162 catgaataatcattaatcacatttcatgaacaatcgccaattacttgtatca 28836213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 24719275 - 24719205
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| ||||| || ||||||||  ||||||| | |||| ||||| ||||||||||||||||||||||||||    
T  24719275 tcatgaacaaccatcaatcatattccatgaacattcataaatcacatttcatgaacaatcaccaatcacat 24719205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 18610633 - 18610686
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  18610633 caatcatattccatgaacattcattaatcacatttcatgaacaatcaccaatca 18610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 41508928 - 41508883
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||    
T  41508928 catgaacaatcattaatcacatttcatgaacaatcaccaagcacat 41508883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 24108443 - 24108371
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    |||| |||||||||||||||||  ||||||| | |||| ||||| |||||||| ||||||| ||| |||||||    
T  24108443 tcatgaacaatcaccaatcatattccatgaacattcatcaatcacatttcatggacaatcatcaaacacatgt 24108371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 24387413 - 24387378
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatca 153  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24387413 catgaataatcattaatcacatttcatgaacaatca 24387378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 22909319 - 22909277
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    |||||| |||| ||||||| |||||||||||||||||||||||    
T  22909319 catgaacaatcgttaatcacatttcatgaacaatcaccaatca 22909277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 16041365 - 16041312
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| ||||||||||| |||||||||||    
T  16041365 caatcatattccatgaacattcattaatcacatttcatgaacgatcaccaatca 16041312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 16043041 - 16042988
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| ||||||||||| |||||||||||    
T  16043041 caatcatattccatgaacattcattaatcacatttcatgaacgatcaccaatca 16042988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 24108470 - 24108397
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||| ||||||||||||||| |   |||||| |||||  ||||||||| |||||||| ||| |||||||||    
T  24108470 acatcatgaacaatcaccaatcacatttcatgaacaatcaccaatcatattccatgaacattcatcaatcacat 24108397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 16041331 - 16041263
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcac 161  Q
    |||| ||| ||||||||||||||  |||||| |||||  ||||| |  |||||||||||||||||||||    
T  16041331 tcatgaacgatcaccaatcataactcatgaacaatcaccaatcacaagtcatgaacaatcaccaatcac 16041263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 16043007 - 16042939
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcac 161  Q
    |||| ||| ||||||||||||||  |||||| |||||  ||||| |  |||||||||||||||||||||    
T  16043007 tcatgaacgatcaccaatcataactcatgaacaatcaccaatcacaagtcatgaacaatcaccaatcac 16042939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 22909364 - 22909309
Alignment:
Q  99 acaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatc 152  Q
    ||||||||||||||||  |  |||||| |||||||||||| |||||||||||||||    
T  22909364 acaatcaccaatcatatacatcatgaacaatcattaatcacatttcatgaacaatc 22909309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 24108487 - 24108424
Alignment:
Q  99 acaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||||||||||  |  |||||| |||||  ||||| |||||||||||||||||||||||    
T  24108487 acaatcaccaatcatatacatcatgaacaatcaccaatcacatttcatgaacaatcaccaatca 24108424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 24930828 - 24930792
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  24930828 catgaataatcattaatcacattccatgaacaatcac 24930792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 23975897 - 23975982
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23975897 acatcatgaacactcaccaatcttaagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 23975982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 18579022 - 18579095
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18579022 acatcatgaagaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatcacat 18579095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 33316418 - 33316331
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttc--atgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||| ||||    
T  33316418 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatatgaacaattaccaatcacatgtatcagaaaca 33316331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 18004879 - 18004801
Alignment:
Q  99 acaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||  |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18004879 acaatcaccaatcatatacatcatgaacaatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 18004801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 18128529 - 18128612
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||| ||||||| |||||||||  ||||||| |||||| ||||| |||||||||||||||||||||||||| ||||| |||||    
T  18128529 atcatgaacaatccccaatcatattccatgaacaatcatcaatcacatttcatgaacaatcaccaatcacatttatcatgaaca 18128612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 18128700 - 18128770
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| |||||||||||||||||  ||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  18128700 tcatgaacaatcaccaatcatattccatgaacaatcatcaatcacatttcatgaacaatcaccaatcacat 18128770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 4989170 - 4989221
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  4989170 catgaataatcattaatcacatttcatgaacaatcaccaattacatgtatca 4989221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 16827818 - 16827767
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  16827818 catgaataatcattaatcacatttcatgaacaatcaccaattacatgtatca 16827767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 16827768 - 16827711
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||    
T  16827768 catgaataatcattaatcacatttcatgaacaattaccaattacatgtatcatgaaca 16827711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 4989270 - 4989349
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||| |||||||||||||||||||||||||| | |||  ||| | ||||||||||||| || || ||||||||||||    
T  4989270 acatcatgaacaatcaccaatcataagccatgaacattcaccaattacatttcatgaacaaacatcattcacatgtatca 4989349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 19984916 - 19984865
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  19984916 catgaataatcattaatctcatttcatgaacaatcaccaatcacatatatca 19984865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 25173700 - 25173751
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  25173700 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 25173751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 16827666 - 16827589
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||| |||||||||||||||||||||||||| | |||  ||| | ||||||||||||| || || ||||||||||||    
T  16827666 atcatgaacaatcaccaatcataagccatgaacattcaccaattacatttcatgaacaaacatcattcacatgtatca 16827589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 13622926 - 13622858
Alignment:
Q  101 aatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |   |||||| |||||||||||| |||||||||| ||||||||||||||| |||||    
T  13622926 aatcaccaatcacatttcatgaacaatcattaatcacatttcatgaataatcaccaatcacatatatca 13622858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 18843686 - 18843614
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    |||| ||||||||||| |||||  ||||||| | |||||||||| |||||||| ||||||| |||||||||||    
T  18843686 tcatgaacaatcaccagtcatattccatgaacattcattaatcacatttcatggacaatcatcaatcacatgt 18843614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 18128628 - 18128698
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| ||||||||||||||  |   |||||| |||||||||||| | ||||||||||||||||||||||||    
T  18128628 tcatgaacaatcaccaatctcatttcatgaacaatcattaatcacaattcatgaacaatcaccaatcacat 18128698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 18004761 - 18004716
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||||    
T  18004761 catgaataatcgttaatcacatttcacgaacaatcaccaatcacat 18004716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 18128605 - 18128646
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatc 159  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  18128605 catgaacaatcattaatcacatttcatgaacaatcaccaatc 18128646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 19627703 - 19627756
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  19627703 caatcatattccatgaacattcattaatcacatttcatgaacaatcaccaatca 19627756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 35011111 - 35011058
Alignment:
Q  107 caatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||||  ||||||| | |||||||||| |||||||||||||||||||||||    
T  35011111 caatcatattccatgaacattcattaatcacatttcatgaacaatcaccaatca 35011058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 18825625 - 18825553
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    |||| |||||||||||||||||  | ||||| | |||||||||| |||||||| |||||||  ||||||||||    
T  18825625 tcatgaacaatcaccaatcatattctatgaacattcattaatcacatttcatggacaatcattaatcacatgt 18825553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 16238817 - 16238868
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||| |||||||||| ||| ||||||||||||||| |||||    
T  16238817 catgaacaatcattagtcatatttcaggaataatcaccaatcacatatatca 16238868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 18128676 - 18128746
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| ||||||||||||||| |   |||||| |||||  ||||||||| |||||||||||| |||||||||    
T  18128676 tcatgaacaatcaccaatcacatttcatgaacaatcaccaatcatattccatgaacaatcatcaatcacat 18128746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 18825675 - 18825606
Alignment:
Q  93 tcatcaacaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    |||| |||||||||||||||||  |  |||||| |||||  ||||| |||||||||||||||||||||||    
T  18825675 tcatgaacaatcaccaatcatatacatcatgaacaatcaccaatcacatttcatgaacaatcaccaatca 18825606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 1554139 - 1554184
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||||||||||||  |||||||||||||||| |||||    
T  1554139 catgaacaatcattaatcatatcccatgaacaatcaccaaccacat 1554184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 25173910 - 25173970
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| || |||||||||||| ||| |||||| ||||||| |||||| ||||||||||||    
T  25173910 acatcatgaagaatcaccaatcaaaagtcatgaacaatcatt-atcataattcatgaacaat 25173970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 35017454 - 35017377
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| |||| |||||||| |||||| ||||| |||||    
T  35017454 atcatgaacaatcctcaatcatatttcatgaacaatcattaatcacattttatgaacaaccaccaaccacatttatca 35017377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 175
Target Start/End: Complemental strand, 14628390 - 14628362
Alignment:
Q  147 acaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||||||||||||||||||||||    
T  14628390 acaatcaccaatcacatgtatcaggaaca 14628362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 19741 - 19826
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  19741 acatcatgaacaatcaccaatcataagccatgaagaatcattaatcatatttcatgactaatcagcaatcacatgtatcaggaaca 19826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 17711 - 17782
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcac 161  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  17711 acatcatgaacaatcaccaatcataagccatgaacaatcatcaatcatatttcatgaacaatcaccaatcac 17782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 4643 - 4573
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4643 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatca 4573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 4592 - 4524
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcatt-aatcatatttcatgaacaatcaccaatca 160  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  4592 tcatgaacaatcaccaatcataagccatgaacaatcatttaatcatatttcatgaacaatcaccaatca 4524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 4463 - 4413
Alignment:
Q  119 atgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  4463 atgaataatcattaatcacatttcatgaacaatcaccaatcacatatatca 4413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 49483 - 49413
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49483 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaatcaccaatca 49413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 49432 - 49364
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcatt-aatcatatttcatgaacaatcaccaatca 160  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  49432 tcatgaacaatcaccaatcataagccatgaacaatcatttaatcatatttcatgaacaatcaccaatca 49364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 49303 - 49253
Alignment:
Q  119 atgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  49303 atgaataatcattaatcacatttcatgaacaatcaccaatcacatatatca 49253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 29851 - 29921
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  29851 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaaaaatcaccaatca 29921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 21638 - 21559
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||| ||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  21638 acatcatgaacaaacaccaatcgtaagccatgaacaatcgttaatcatatttcatgaacaatcgccaatcacatgtatca 21559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 16982 - 17043
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16982 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaat 17043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 54; Significance: 5e-22; HSPs: 4)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 498 - 571
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||    
T  498 acatcatgaacaatcaccaatcataagcgatgaacaatcattaatcatatttcatgaatgatcaccaatcacat 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 3296 - 3367
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||| ||||| || ||||||||  ||||||| | |||||||||| ||||||||||||||||||||||||||    
T  3296 atcatgaacaaccatcaatcatattccatgaacattcattaatcacatttcatgaacaatcaccaatcacat 3367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 3400 - 3444
Alignment:
Q  125 aatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |||||||||||| ||||||||||||| |||||    
T  3400 aatcattaatcacatttcatgaacattcaccaatcacatatatca 3444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 3346 - 3391
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||  ||||| ||||||||||||||||||||||||||    
T  3346 catgaacaatcaccaatcacatttcatgaacaatcaccaatcacat 3391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 5e-22; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 77840 - 77913
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||    
T  77840 acatcatgaacaatcaccaatcataagcaatgaacaatcattaatcatatttcatgaaagatcaccaatcacat 77913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 36087 - 36171
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaacag 176  Q
    ||||| |||||||| ||||||||  ||||||| |||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||    
T  36087 atcatgaacaatcatcaatcatattccatgaacaatcatcaatcacatttcatgaacaatcaccaaccacatttatcatgaacag 36171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 36163 - 36214
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| | |||||||||| |||||||||||||||||||| ||||| |||||    
T  36163 catgaacagtcattaatcacatttcatgaacaatcaccaaccacatttatca 36214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 36039 - 36096
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||| |||| | ||||||||||||||||||||||  |||||||| ||||| |||||    
T  36039 catgaacaatcctcaatcatatttcatgaacaatcattaatcacatttatcatgaaca 36096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 15863200 - 15863139
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15863200 acatcatgaacaatcaccaatcataagccatgaacaatcattaatcatatttcatgaacaat 15863139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 22352467 - 22352524
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22352467 catgaataatcatcaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 22352524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 15863326 - 15863269
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  15863326 catgaataatcattaatcacatttcatgaacaatcaccaattacatgtatcatgaaca 15863269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 20444185 - 20444236
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  20444185 catgaataatcattaatcacatttcatgaacaatcaccaatcacatatatca 20444236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 37846191 - 37846140
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  37846191 catgaataatcattaatcacatttcatgaacaatcaccaatcacatatatca 37846140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 41217736 - 41217819
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  41217736 atcatgaacaatcctcaatcatatttcatgaacaatcattaatcacatttcatgaacaatcaccaatcacatgtgtcatgaaca 41217819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 17147002 - 17147053
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  17147002 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 17147053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 20529949 - 20530000
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  20529949 catgaacaatcattaatcacatttcatgaacaatcaccaatcacatatatca 20530000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 20589923 - 20589852
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||| |||||||| ||||||||  ||||||| |||||| ||||| |||||||||||||||||||| |||||    
T  20589923 atcatgaacaatcatcaatcatattccatgaacaatcatcaatcacatttcatgaacaatcaccaaccacat 20589852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 20895515 - 20895464
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  20895515 catgaacaatcattaatcacatttcatgaacaatcaccaatcacatatatca 20895464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 22352572 - 22352623
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  22352572 catgaatagtcattaatcacatttcatgaacaatcaccaatcacatatatca 22352623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 41217864 - 41217935
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| ||||||||||||||||||||||||||    
T  41217864 atcatgaacaatcctcaatcatatttcatgaacaatcattaatcacatttcatgaacaatcaccaatcacat 41217935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 20589848 - 20589790
Alignment:
Q  117 ccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||| ||||| |||||    
T  20589848 ccatgaacaatcattaatcacatttcatgaacaatcaccaaccacatttatcatgaaca 20589790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 22365126 - 22365177
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||| |||||    
T  22365126 catgaatagtcattaatcacatttcacgaacaatcaccaatcacatttatca 22365177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 20252557 - 20252603
Alignment:
Q  117 ccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||| | |||||||||| ||||||||||||||||||||||||||    
T  20252557 ccatgaacattcattaatcacatttcatgaacaatcaccaatcacat 20252603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 17147128 - 17147188
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||| |||||| ||||||||||||    
T  17147128 acatcatgaacaatcaccaatcaaaagtcatgaacaatcatt-atcataattcatgaacaat 17147188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 20529925 - 20529970
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||||    
T  20529925 catgaataatcattaatcacatttcatgaacaatcattaatcacat 20529970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 44036612 - 44036576
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    ||||||||||||||||||| |||||||||||||||||    
T  44036612 catgaataatcattaatcacatttcatgaacaatcac 44036576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 20252581 - 20252651
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| ||||||||||||||| |   |||||| |||||  |||||||  |||||||||||||||||||||||    
T  20252581 tcatgaacaatcaccaatcacatttcatgaacaatcaccaatcataagtcatgaacaatcaccaatcacat 20252651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 20589797 - 20589752
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||||| ||| |||||||||||||||||||| |||||    
T  20589797 catgaacaatcattagtcacatttcatgaacaatcaccaaccacat 20589752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 20929925 - 20929961
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  20929925 catgaataatcattaatcacatttcatggacaatcac 20929961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 217 - 142
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    ||||||| |||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||| |||||||||||    
T  217 acatcatgaacaatcatcaatcataagccatgcacaatcattaatcatatttcatggacaatcatcaatcacatgt 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 50; Significance: 1e-19; HSPs: 6)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 762 - 823
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  762 acatcatgaacaatcaccaatcataagccatgcacaatcattaatcatatttcatgaacaat 823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 5544 - 5627
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  5544 atcatgaacaatcctcaatcatatttcatgaacaatcattaatcacatttcatgaacaatcaccaatcacatgtgtcatgaaca 5627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 610 - 667
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||    
T  610 catgaataataattaatcacatttcatgaacaatcaccaattacatgtatcatgaaca 667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 5674 - 5725
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  5674 catgaacaatcattaatcacatttcatgaacaatcaccaatcacatttatca 5725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 510 - 550
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaat 158  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  510 catgaataatcattaatcacatttcatgaacaatcaccaat 550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 560 - 611
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||||||||| |||||| |||| ||||| |||||||||| ||||||||||    
T  560 catgaataatcactaatcacatttaatgaaaaatcaccaattacatgtatca 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 17976 - 18047
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||| |||||||| ||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  17976 atcatgaacaatcatcaatcatattccatgaacaatcattaatcacatttcatgaacaatcaccaatcacat 18047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 17942 - 17985
Alignment:
Q  132 aatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||    
T  17942 aatcatatttcatgaacaatcatcaatcacatttatcatgaaca 17985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 94544 - 94615
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||| |||||||| ||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  94544 atcatgaacaatcatcaatcatattccatgaacaatcattaatcacatttcatgaacaatcaccaatcacat 94615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 94666 - 94711
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  94666 catgaacaatcattaatcacatttcatgaacaatcaccaatcacat 94711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 94593 - 94663
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| ||||||||||||||| |   ||||||||||||  ||||| ||||||||||||||||  ||||||||    
T  94593 tcatgaacaatcaccaatcacatttcatgaataatcaccaatcacatttcatgaacaatcattaatcacat 94663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 94625 - 94687
Alignment:
Q  101 aatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||||||||| |   |||||| |||||||||||| ||||||||||||||||  ||||||||    
T  94625 aatcaccaatcacatttcatgaacaatcattaatcacatttcatgaacaatcattaatcacat 94687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 109850 - 109789
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaat 151  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||||||| |||||||||||    
T  109850 acatcatgaacaatcaccaatcataagccatgcacaatcattaatcatatctcatgaacaat 109789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 110000 - 109945
Alignment:
Q  120 tgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| ||| |||||    
T  110000 tgaataatcatcaatcacatttcatgaacaatcaccaatcacatgtgtcatgaaca 109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 2900 - 2849
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  2900 catgaataatcattaatcacatttcatgaacaatcaccaattacatgtatca 2849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 2680 - 2763
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  2680 atcatgaacaatcctcaatcatatttcatgaacaatcattaatcacatttcatgaacaatcaccaatcacatgtgtcatgaaca 2763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 2808 - 2891
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  2808 atcatgaacaatcctcaatcatatttcatgaacaatcattaatcacatttcatgaacaatcaccaatcacatgtgtcatgaaca 2891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 2936 - 3019
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  2936 atcatgaacaatcctcaatcatatttcatgaacaatcattaatcacatttcatgaacaatcaccaatcacatgtgtcatgaaca 3019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 3066 - 3117
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  3066 catgaacaatcattaatcacatttcatgaacaatcaccaatcacatttatca 3117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 2462 - 2399
Alignment:
Q  98 aacaatcaccaatcataagccatgaataatcattaatcatatttcatgaac-aatcaccaatca 160  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  2462 aacaatcactaatcataagccatgaacaatcattaatcatatttcataaacaaatcaccaatca 2399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 21161 - 21078
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  21161 atcatgaacaatcctcaatcatatttcatgaacaatcattaatcacatttcatgaacaatcaccaatcacatgtgtcatgaaca 21078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 21031 - 20980
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  21031 catgaacaatcattaatcacatttcatgaacaatcaccaatcacatatatca 20980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 270514 - 270565
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  270514 catgaataatcattaatcacatttcatgaacaatcaccaattacatgtatca 270565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 30940 - 31016
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||| ||||||||||||||| |   |||||| |||||||||||| |||||||||||| ||||||||||||| |||||    
T  30940 tcatgaacaatcaccaatcacatttcatgaacaatcattaatcacatttcatgaacattcaccaatcacatatatca 31016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 30891 - 30962
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||| ||||| || ||||||||  ||||||| | |||| ||||| ||||||||||||||||||||||||||    
T  30891 atcatgaacaaccatcaatcatattccatgaacattcatcaatcacatttcatgaacaatcaccaatcacat 30962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 7628 - 7711
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| |||||||||| ||||||||||||||||| ||| |||||    
T  7628 atcatgaacaatcctcaatcatatttcatgaacaatcattaatcacatttcatgaataatcaccaatcacatgtgtcatgaaca 7711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 7765 - 7815
Alignment:
Q  125 aatcattaatcatatttcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||||| |||||||||||| ||||||| ||||| ||||| |||||    
T  7765 aatcattaatcacatttcatgaacattcaccaaccacatatatcatgaaca 7815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 9935 - 9872
Alignment:
Q  90 acatcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatca 153  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||||||||   ||||||||||||    
T  9935 acatcatgaacaatcaccaatcataagtcatgaacaatcattaatcataagccatgaacaatca 9872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 9908 - 9858
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttca 143  Q
    |||| ||||||||  |||||||||||||||| |||||||||||||||||||    
T  9908 tcatgaacaatcattaatcataagccatgaacaatcattaatcatatttca 9858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 5)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 33655 - 33722
Alignment:
Q  98 aacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    |||||||||||||||||  ||||||| | |||||||||| |||||||| ||||||| |||||||||||    
T  33655 aacaatcaccaatcatattccatgaacattcattaatcacatttcatggacaatcatcaatcacatgt 33722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 32899 - 32863
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    ||||||||||||||||||| |||||||||||||||||    
T  32899 catgaataatcattaatcacatttcatgaacaatcac 32863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 33603 - 33645
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    |||||| |||| ||||||| |||||||||||||||||||||||    
T  33603 catgaacaatcgttaatcacatttcatgaacaatcaccaatca 33645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 33626 - 33696
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| |||||||||||||||||  ||||||| |||||  ||||||||| |||||||| |||  ||||||||    
T  33626 tcatgaacaatcaccaatcatattccatgaacaatcaccaatcatattccatgaacattcattaatcacat 33696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 33558 - 33613
Alignment:
Q  99 acaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatc 152  Q
    ||||||||||||||||  |  |||||| |||||||||||| |||||||||||||||    
T  33558 acaatcaccaatcatatacatcatgaacaatcattaatcacatttcatgaacaatc 33613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 31302 - 31353
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  31302 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 31353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 5)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 39189 - 39122
Alignment:
Q  98 aacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacatgt 165  Q
    |||||||||||||||||  ||||||| | |||||||||| |||||||| ||||||| |||||||||||    
T  39189 aacaatcaccaatcatattccatgaacattcattaatcacatttcatggacaatcatcaatcacatgt 39122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 39945 - 39981
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39945 catgaataatcattaatcacatttcatgaacaatcac 39981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 39218 - 39148
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| |||||||||||||||||  ||||||| |||||  ||||||||| |||||||| |||  ||||||||    
T  39218 tcatgaacaatcaccaatcatattccatgaacaatcaccaatcatattccatgaacattcattaatcacat 39148  T

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Target: scaffold0078; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 39241 - 39199
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    |||||| |||| ||||||| |||||||||||||||||||||||    
T  39241 catgaacaatcgttaatcacatttcatgaacaatcaccaatca 39199  T

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Target: scaffold0078; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 39286 - 39231
Alignment:
Q  99 acaatcaccaatcataagc--catgaataatcattaatcatatttcatgaacaatc 152  Q
    ||||||||||||||||  |  |||||| |||||||||||| |||||||||||||||    
T  39286 acaatcaccaatcatatacatcatgaacaatcattaatcacatttcatgaacaatc 39231  T

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Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 144979 - 145030
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  144979 catgaataatcattaatcacatttcatgaacagtcaccaatcacatatatca 145030  T

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Target: scaffold0025; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 147238 - 147289
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  147238 catgaataatcattaatcacatttcatgaacagtcaccaatcacatatatca 147289  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 125118 - 125067
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  125118 catgaacaatcattaatcacatttcatgaacaatcaccaatcacatatatca 125067  T

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Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 72137 - 72086
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||| |||||    
T  72137 catgaacaatcattaatcacatttcatgaataatcaccaatcacatatatca 72086  T

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Target: scaffold0011; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 76518 - 76467
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||| |||||    
T  76518 catgaacaatcattaatcacatttcatgaataatcaccaatcacatatatca 76467  T

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Target: scaffold0011; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 192948 - 192999
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||| ||| ||||||||||| |||||    
T  192948 catgaacaatcattaatcacatttcatgaataataaccaatcacatatatca 192999  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 5404 - 5455
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  5404 catgaataatcattaatcacatttcatgaacaatcaccaattacttgtatca 5455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 217456 - 217420
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    ||||||||||||||||| | |||||||||||||||||    
T  217456 catgaataatcattaattacatttcatgaacaatcac 217420  T

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Target: scaffold0434 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 3100 - 3151
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||| |||||    
T  3100 catgaacaatcatcaatcatatttcatgaacaatcaccaaccacatttatca 3151  T

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Target: scaffold0218 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 6935 - 6884
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || |||||    
T  6935 catgaataatcattaatcacatttcatgaacagtcaccaatcatatatatca 6884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 447 - 396
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||| |||||    
T  447 catgaacaatcattaatcacatttcatgaataatcaccaatcacatatatca 396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 488 - 426
Alignment:
Q  101 aatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||||||||||   ||||||||||||| ||||| ||||||||||||||||  ||||||||    
T  488 aatcaccaatcatatttcatgaataatcatcaatcacatttcatgaacaatcattaatcacat 426  T

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Target: scaffold0467 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 11745 - 11700
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||    
T  11745 catgaataaccattaatcacctttcatgaacaatcaccaatcacat 11700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 166191 - 166123
Alignment:
Q  92 atcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatca 160  Q
    ||||| |||||||  ||||||||   |||||| |||||||||||| |||||||||||||||| ||||||    
T  166191 atcatgaacaatcctcaatcatacttcatgaacaatcattaatcacatttcatgaacaatcagcaatca 166123  T

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Target: scaffold0106 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 39973 - 40024
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    ||||||||||||||||| | | |||||||||| ||||||||||||| |||||    
T  39973 catgaataatcattaataacagttcatgaacagtcaccaatcacatatatca 40024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 52614 - 52665
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacatgtatca 169  Q
    |||||| |||||||||||||| | |||||||||||||||| ||||| |||||    
T  52614 catgaacaatcattaatcatactccatgaacaatcaccaaccacatatatca 52665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 26689 - 26759
Alignment:
Q  93 tcatcaacaatcaccaatcataagccatgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||| ||| |||||||||||||   |||||| |||||  |||||||  |||||||||||||||||||||||    
T  26689 tcatgaacgatcaccaatcatatttcatgaacaatcaccaatcataagtcatgaacaatcaccaatcacat 26759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 25727 - 25761
Alignment:
Q  141 tcatgaacaatcaccaatcacatgtatcaggaaca 175  Q
    |||||||||||||||||||| ||||||||||||||    
T  25727 tcatgaacaatcaccaatcatatgtatcaggaaca 25761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 15936 - 15891
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcaccaatcacat 163  Q
    |||||| |||| | |||||||||||||||||||||||||| |||||    
T  15936 catgaacaatcctcaatcatatttcatgaacaatcaccaaccacat 15891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 41160 - 41196
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    ||||||||||||||||| | |||||||||||||||||    
T  41160 catgaataatcattaatgacatttcatgaacaatcac 41196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 197808 - 197772
Alignment:
Q  118 catgaataatcattaatcatatttcatgaacaatcac 154  Q
    |||| |||||||||||||| |||||||||||||||||    
T  197808 catggataatcattaatcacatttcatgaacaatcac 197772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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