View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0739_low_42 (Length: 258)

Name: NF0739_low_42
Description: NF0739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0739_low_42
NF0739_low_42
[»] chr7 (71 HSPs)
chr7 (91-258)||(10607282-10607449)
chr7 (91-258)||(16582371-16582538)
chr7 (91-258)||(9752469-9752636)
chr7 (91-257)||(7520176-7520345)
chr7 (91-229)||(13891580-13891718)
chr7 (91-232)||(39268301-39268442)
chr7 (91-258)||(31675-31844)
chr7 (91-258)||(12706082-12706251)
chr7 (91-258)||(12713490-12713659)
chr7 (91-258)||(12722148-12722317)
chr7 (91-258)||(16908469-16908638)
chr7 (91-257)||(39721145-39721314)
chr7 (91-229)||(11660232-11660370)
chr7 (91-258)||(12717237-12717406)
chr7 (91-257)||(15083175-15083344)
chr7 (91-258)||(18277944-18278113)
chr7 (91-258)||(18281908-18282077)
chr7 (132-258)||(20486733-20486859)
chr7 (91-225)||(13891963-13892097)
chr7 (91-229)||(14420737-14420875)
chr7 (91-229)||(18871247-18871385)
chr7 (101-242)||(26291116-26291258)
chr7 (91-257)||(2833442-2833610)
chr7 (91-227)||(18424185-18424321)
chr7 (91-229)||(838123-838262)
chr7 (91-229)||(1203303-1203442)
chr7 (91-229)||(16109965-16110104)
chr7 (91-229)||(10897887-10898025)
chr7 (91-229)||(16004954-16005092)
chr7 (122-258)||(1859982-1860119)
chr7 (126-258)||(25928332-25928465)
chr7 (91-229)||(834035-834174)
chr7 (91-229)||(1199215-1199354)
chr7 (91-229)||(18606285-18606426)
chr7 (91-229)||(146450-146588)
chr7 (91-257)||(2531293-2531460)
chr7 (126-258)||(13919373-13919506)
chr7 (91-220)||(41283595-41283724)
chr7 (91-215)||(72376-72500)
chr7 (91-215)||(76485-76609)
chr7 (105-215)||(45171505-45171615)
chr7 (96-219)||(15213003-15213126)
chr7 (163-256)||(18301373-18301466)
chr7 (91-184)||(15166200-15166293)
chr7 (91-167)||(9752644-9752720)
chr7 (101-184)||(11302267-11302350)
chr7 (141-220)||(16185524-16185603)
chr7 (162-220)||(11394878-11394936)
chr7 (91-167)||(9752728-9752804)
chr7 (132-212)||(23666460-23666539)
chr7 (177-226)||(455893-455942)
chr7 (177-226)||(11393817-11393866)
chr7 (177-226)||(11972059-11972108)
chr7 (177-226)||(14949671-14949720)
chr7 (177-226)||(15377263-15377312)
chr7 (177-226)||(16232083-16232132)
chr7 (177-226)||(16409631-16409680)
chr7 (177-226)||(20385672-20385721)
chr7 (177-226)||(21190145-21190194)
chr7 (177-226)||(24701818-24701867)
chr7 (177-226)||(24704268-24704317)
chr7 (177-226)||(26356500-26356549)
chr7 (177-226)||(26358952-26359001)
chr7 (177-226)||(27216438-27216487)
chr7 (177-226)||(32125062-32125111)
chr7 (177-226)||(41522500-41522549)
chr7 (177-226)||(41524962-41525011)
chr7 (91-167)||(39268450-39268526)
chr7 (192-229)||(29795214-29795251)
chr7 (192-229)||(29799033-29799070)
chr7 (119-167)||(13891907-13891955)
[»] chr3 (75 HSPs)
chr3 (91-258)||(12853325-12853492)
chr3 (91-258)||(16795453-16795620)
chr3 (91-258)||(7108188-7108357)
chr3 (91-258)||(7112123-7112292)
chr3 (91-258)||(11068563-11068732)
chr3 (91-258)||(22320079-22320248)
chr3 (91-258)||(22335134-22335303)
chr3 (91-258)||(55021326-55021495)
chr3 (91-257)||(5219797-5219965)
chr3 (91-257)||(11301626-11301794)
chr3 (91-226)||(10834935-10835070)
chr3 (91-258)||(11167053-11167222)
chr3 (91-229)||(13435768-13435906)
chr3 (91-258)||(28948411-28948580)
chr3 (91-242)||(30064334-30064486)
chr3 (101-257)||(11853666-11853824)
chr3 (91-229)||(14764786-14764924)
chr3 (91-258)||(15616127-15616296)
chr3 (91-229)||(3801920-3802058)
chr3 (91-229)||(8928858-8928996)
chr3 (91-258)||(14497898-14498066)
chr3 (101-242)||(18933333-18933475)
chr3 (91-229)||(29545929-29546067)
chr3 (91-229)||(54519547-54519685)
chr3 (91-257)||(14664375-14664543)
chr3 (91-257)||(14667539-14667707)
chr3 (91-229)||(9532208-9532346)
chr3 (91-228)||(18899400-18899540)
chr3 (91-229)||(23372534-23372672)
chr3 (91-229)||(51299483-51299621)
chr3 (132-258)||(14670017-14670140)
chr3 (91-227)||(19774148-19774284)
chr3 (91-229)||(20249840-20249978)
chr3 (126-258)||(15463863-15463996)
chr3 (91-226)||(16751895-16752030)
chr3 (91-220)||(41084-41213)
chr3 (141-256)||(4590124-4590239)
chr3 (132-258)||(14681541-14681662)
chr3 (91-235)||(12337206-12337348)
chr3 (141-258)||(17318471-17318588)
chr3 (96-219)||(11912382-11912505)
chr3 (91-215)||(4108793-4108918)
chr3 (91-215)||(4112642-4112767)
chr3 (141-258)||(14068024-14068141)
chr3 (104-229)||(12304136-12304262)
chr3 (105-215)||(15963461-15963571)
chr3 (105-215)||(15967385-15967495)
chr3 (105-215)||(15971309-15971419)
chr3 (91-229)||(38312848-38312985)
chr3 (104-220)||(16326041-16326158)
chr3 (96-219)||(16840204-16840327)
chr3 (126-229)||(23173282-23173386)
chr3 (141-220)||(8491732-8491811)
chr3 (169-257)||(37440641-37440731)
chr3 (91-141)||(17348806-17348856)
chr3 (105-172)||(15555602-15555669)
chr3 (162-220)||(5841187-5841245)
chr3 (163-220)||(2249216-2249273)
chr3 (91-172)||(15564801-15564882)
chr3 (163-220)||(45220962-45221019)
chr3 (177-226)||(7781858-7781907)
chr3 (177-226)||(9708156-9708205)
chr3 (177-226)||(13152325-13152374)
chr3 (177-226)||(16454822-16454871)
chr3 (177-226)||(17462741-17462790)
chr3 (177-226)||(34158889-34158938)
chr3 (177-226)||(45607441-45607490)
chr3 (177-226)||(55476085-55476134)
chr3 (177-226)||(55500514-55500563)
chr3 (163-215)||(14648275-14648327)
chr3 (191-226)||(10248256-10248291)
chr3 (216-258)||(8490353-8490395)
chr3 (122-167)||(12853500-12853545)
chr3 (177-226)||(13154790-13154839)
chr3 (177-226)||(15555379-15555428)
[»] chr5 (42 HSPs)
chr5 (91-258)||(22120553-22120720)
chr5 (91-258)||(15238079-15238246)
chr5 (91-258)||(20912214-20912381)
chr5 (91-258)||(22108411-22108577)
chr5 (91-258)||(20294464-20294633)
chr5 (101-258)||(19474132-19474291)
chr5 (104-257)||(18354760-18354915)
chr5 (90-229)||(28372072-28372211)
chr5 (91-250)||(24768530-24768691)
chr5 (91-229)||(37599999-37600137)
chr5 (91-229)||(23113393-23113531)
chr5 (91-229)||(38146409-38146547)
chr5 (91-229)||(19510412-19510550)
chr5 (91-229)||(22338962-22339100)
chr5 (101-258)||(40727361-40727517)
chr5 (91-227)||(10751767-10751903)
chr5 (91-229)||(22335432-22335570)
chr5 (91-229)||(41878642-41878780)
chr5 (91-220)||(33473931-33474060)
chr5 (91-215)||(11219505-11219629)
chr5 (91-215)||(11224091-11224215)
chr5 (91-215)||(11227913-11228037)
chr5 (91-215)||(11226107-11226231)
chr5 (91-215)||(11229903-11230027)
chr5 (96-219)||(36459503-36459626)
chr5 (132-229)||(22749152-22749249)
chr5 (163-220)||(19075911-19075968)
chr5 (132-215)||(9774932-9775014)
chr5 (177-226)||(265311-265360)
chr5 (177-226)||(10733481-10733530)
chr5 (177-226)||(20908575-20908624)
chr5 (188-229)||(22335595-22335636)
chr5 (188-229)||(22339125-22339166)
chr5 (188-229)||(28372006-28372047)
chr5 (177-226)||(29345544-29345593)
chr5 (177-226)||(29348025-29348074)
chr5 (177-226)||(29350498-29350547)
chr5 (177-226)||(31143851-31143900)
chr5 (163-220)||(31253210-31253267)
chr5 (177-226)||(42245906-42245955)
chr5 (163-215)||(43243764-43243816)
chr5 (192-226)||(39362993-39363027)
[»] chr1 (26 HSPs)
chr1 (91-258)||(22132060-22132227)
chr1 (105-258)||(41801240-41801393)
chr1 (91-258)||(1009212-1009381)
chr1 (91-258)||(1926755-1926924)
chr1 (91-258)||(16376775-16376944)
chr1 (91-258)||(20925769-20925938)
chr1 (91-257)||(33795983-33796151)
chr1 (101-242)||(20230116-20230258)
chr1 (91-258)||(52634218-52634387)
chr1 (91-229)||(16370875-16371013)
chr1 (91-227)||(41389657-41389793)
chr1 (91-227)||(39245163-39245297)
chr1 (91-227)||(39248718-39248852)
chr1 (91-214)||(32649017-32649140)
chr1 (141-258)||(21406253-21406370)
chr1 (91-220)||(29533837-29533967)
chr1 (91-184)||(20439188-20439281)
chr1 (144-220)||(11809949-11810025)
chr1 (163-220)||(11945016-11945073)
chr1 (163-220)||(43630992-43631049)
chr1 (177-226)||(13988473-13988522)
chr1 (177-226)||(21475629-21475678)
chr1 (177-226)||(21923841-21923890)
chr1 (177-226)||(23594277-23594326)
chr1 (163-215)||(20032180-20032232)
chr1 (177-226)||(41372677-41372726)
[»] scaffold0142 (1 HSPs)
scaffold0142 (91-258)||(8701-8868)
[»] chr4 (51 HSPs)
chr4 (91-258)||(17052407-17052574)
chr4 (91-258)||(22634888-22635055)
chr4 (106-258)||(12422908-12423060)
chr4 (91-258)||(23996928-23997094)
chr4 (91-229)||(24048375-24048513)
chr4 (91-257)||(20158408-20158576)
chr4 (91-258)||(9555019-9555188)
chr4 (91-258)||(14758951-14759120)
chr4 (91-258)||(14955719-14955888)
chr4 (91-258)||(33740786-33740955)
chr4 (91-232)||(13813820-13813961)
chr4 (91-232)||(13818308-13818449)
chr4 (91-257)||(20163859-20164027)
chr4 (91-258)||(4562733-4562902)
chr4 (91-258)||(5758415-5758584)
chr4 (91-258)||(25688392-25688561)
chr4 (104-258)||(17807017-17807173)
chr4 (91-229)||(15533169-15533307)
chr4 (91-257)||(20161084-20161252)
chr4 (91-229)||(30145733-30145872)
chr4 (91-229)||(18211554-18211692)
chr4 (91-227)||(15223496-15223632)
chr4 (126-256)||(631711-631841)
chr4 (91-229)||(36036902-36037040)
chr4 (91-258)||(12486221-12486387)
chr4 (91-229)||(49549073-49549212)
chr4 (91-220)||(28384801-28384930)
chr4 (141-258)||(27532752-27532869)
chr4 (141-257)||(10711825-10711943)
chr4 (141-257)||(10925595-10925713)
chr4 (91-226)||(38106897-38107031)
chr4 (91-167)||(13818457-13818533)
chr4 (91-167)||(24048521-24048597)
chr4 (126-167)||(22635063-22635104)
chr4 (105-172)||(38106798-38106865)
chr4 (126-184)||(14047303-14047361)
chr4 (105-172)||(40906323-40906390)
chr4 (177-226)||(1838053-1838102)
chr4 (177-226)||(12033681-12033730)
chr4 (122-167)||(13813969-13814014)
chr4 (122-167)||(13818541-13818586)
chr4 (177-226)||(14739599-14739648)
chr4 (177-226)||(15118902-15118951)
chr4 (177-226)||(29267226-29267275)
chr4 (177-226)||(44614851-44614900)
chr4 (177-226)||(50222889-50222938)
chr4 (190-226)||(18239969-18240005)
chr4 (126-167)||(30145684-30145725)
chr4 (163-200)||(37839211-37839248)
chr4 (163-200)||(42597940-42597977)
chr4 (119-167)||(12422843-12422891)
[»] scaffold0124 (2 HSPs)
scaffold0124 (91-258)||(25529-25696)
scaffold0124 (91-184)||(37568-37661)
[»] chr8 (40 HSPs)
chr8 (91-258)||(23427776-23427943)
chr8 (106-258)||(44385795-44385947)
chr8 (91-258)||(21974143-21974312)
chr8 (126-258)||(23913250-23913382)
chr8 (91-257)||(21409850-21410019)
chr8 (91-257)||(21804342-21804511)
chr8 (91-258)||(21978253-21978422)
chr8 (91-258)||(43250152-43250321)
chr8 (91-257)||(14399053-14399221)
chr8 (91-229)||(27942675-27942814)
chr8 (91-220)||(11774246-11774375)
chr8 (141-258)||(21386159-21386276)
chr8 (91-220)||(8414976-8415105)
chr8 (91-215)||(21829465-21829589)
chr8 (91-215)||(22110551-22110675)
chr8 (105-215)||(18864109-18864219)
chr8 (105-215)||(30941569-30941679)
chr8 (91-200)||(363218-363327)
chr8 (102-219)||(21328527-21328644)
chr8 (91-184)||(8729645-8729738)
chr8 (96-219)||(42560882-42561005)
chr8 (141-220)||(21967992-21968071)
chr8 (141-220)||(21980832-21980911)
chr8 (141-220)||(21985815-21985894)
chr8 (141-220)||(22000778-22000857)
chr8 (141-220)||(22009196-22009275)
chr8 (163-220)||(44494223-44494280)
chr8 (179-220)||(34950124-34950165)
chr8 (163-215)||(11252087-11252138)
chr8 (177-226)||(1483965-1484014)
chr8 (177-226)||(4482875-4482924)
chr8 (177-226)||(4542922-4542971)
chr8 (177-226)||(5853841-5853890)
chr8 (177-226)||(14823338-14823387)
chr8 (177-226)||(18678574-18678623)
chr8 (177-226)||(18717763-18717812)
chr8 (177-226)||(20402790-20402839)
chr8 (177-226)||(22001324-22001373)
chr8 (192-229)||(44475750-44475787)
chr8 (192-229)||(44479012-44479049)
[»] scaffold0327 (1 HSPs)
scaffold0327 (91-258)||(18773-18940)
[»] scaffold0575 (1 HSPs)
scaffold0575 (126-258)||(6922-7054)
[»] scaffold0080 (2 HSPs)
scaffold0080 (91-229)||(33887-34025)
scaffold0080 (135-229)||(28466-28560)
[»] chr6 (49 HSPs)
chr6 (91-258)||(8242362-8242531)
chr6 (91-258)||(11565351-11565520)
chr6 (91-258)||(12620293-12620462)
chr6 (91-258)||(23400627-23400793)
chr6 (91-254)||(11716904-11717069)
chr6 (91-258)||(22861705-22861874)
chr6 (91-258)||(23988253-23988422)
chr6 (91-257)||(27555490-27555657)
chr6 (126-258)||(2076271-2076403)
chr6 (91-257)||(22075347-22075519)
chr6 (91-258)||(14470831-14470998)
chr6 (91-227)||(31479455-31479591)
chr6 (91-229)||(12941171-12941309)
chr6 (91-229)||(23537931-23538069)
chr6 (91-229)||(27222782-27222920)
chr6 (91-214)||(4475745-4475868)
chr6 (91-229)||(28290885-28291023)
chr6 (91-220)||(23955319-23955448)
chr6 (141-258)||(18918542-18918659)
chr6 (91-207)||(27416540-27416656)
chr6 (91-215)||(22947617-22947741)
chr6 (91-215)||(22951573-22951697)
chr6 (91-215)||(23870061-23870185)
chr6 (91-215)||(23874017-23874141)
chr6 (101-227)||(16622797-16622921)
chr6 (105-215)||(23393605-23393715)
chr6 (105-215)||(23413513-23413623)
chr6 (91-258)||(16758665-16758823)
chr6 (96-219)||(34297773-34297896)
chr6 (114-215)||(19869160-19869261)
chr6 (141-258)||(18953447-18953562)
chr6 (96-205)||(1254114-1254223)
chr6 (91-219)||(25737842-25737970)
chr6 (207-258)||(1643318-1643369)
chr6 (162-220)||(28707880-28707938)
chr6 (177-226)||(2291730-2291779)
chr6 (177-226)||(8054592-8054641)
chr6 (163-220)||(9622913-9622969)
chr6 (177-226)||(18335142-18335191)
chr6 (177-226)||(19004609-19004658)
chr6 (126-167)||(23537882-23537923)
chr6 (177-226)||(24422110-24422159)
chr6 (177-226)||(26925189-26925238)
chr6 (177-226)||(33861358-33861407)
chr6 (177-226)||(33863841-33863890)
chr6 (163-215)||(14594666-14594718)
chr6 (191-226)||(1541452-1541487)
chr6 (177-226)||(12741889-12741938)
chr6 (177-226)||(22781835-22781884)
[»] chr2 (40 HSPs)
chr2 (91-258)||(24630007-24630176)
chr2 (91-258)||(30346617-30346786)
chr2 (91-258)||(10103256-10103425)
chr2 (91-258)||(12902566-12902735)
chr2 (91-258)||(24645101-24645270)
chr2 (91-258)||(24647877-24648046)
chr2 (91-258)||(27600321-27600490)
chr2 (126-255)||(9783979-9784108)
chr2 (101-258)||(27380953-27381112)
chr2 (101-258)||(27384923-27385082)
chr2 (91-229)||(19663548-19663686)
chr2 (91-229)||(20260207-20260345)
chr2 (91-229)||(21074498-21074636)
chr2 (91-226)||(9240624-9240759)
chr2 (91-229)||(6481734-6481872)
chr2 (91-229)||(6485201-6485339)
chr2 (91-257)||(31343867-31344035)
chr2 (91-220)||(37378986-37379115)
chr2 (91-194)||(10686272-10686375)
chr2 (91-213)||(24647044-24647166)
chr2 (105-215)||(41532447-41532557)
chr2 (177-226)||(570968-571017)
chr2 (188-229)||(6262204-6262245)
chr2 (177-226)||(18808506-18808555)
chr2 (188-229)||(19663482-19663523)
chr2 (177-226)||(23130441-23130490)
chr2 (177-226)||(23132908-23132957)
chr2 (177-226)||(23135155-23135204)
chr2 (177-226)||(23710082-23710131)
chr2 (177-226)||(24898753-24898802)
chr2 (177-226)||(24901228-24901277)
chr2 (177-226)||(24903705-24903754)
chr2 (177-226)||(24906182-24906231)
chr2 (177-226)||(24908657-24908706)
chr2 (177-226)||(26504943-26504992)
chr2 (177-226)||(26507421-26507470)
chr2 (177-226)||(32040040-32040089)
chr2 (177-226)||(34403049-34403098)
chr2 (177-226)||(39681877-39681926)
chr2 (192-229)||(6262270-6262307)
[»] scaffold1852 (1 HSPs)
scaffold1852 (91-257)||(781-949)
[»] scaffold0028 (6 HSPs)
scaffold0028 (91-258)||(60284-60454)
scaffold0028 (177-226)||(133775-133824)
scaffold0028 (177-226)||(136244-136293)
scaffold0028 (177-226)||(138713-138762)
scaffold0028 (177-226)||(141182-141231)
scaffold0028 (177-226)||(143651-143700)
[»] scaffold0410 (1 HSPs)
scaffold0410 (101-257)||(14804-14962)
[»] scaffold0061 (1 HSPs)
scaffold0061 (91-258)||(68515-68684)
[»] scaffold0349 (1 HSPs)
scaffold0349 (91-258)||(11001-11169)
[»] scaffold0166 (1 HSPs)
scaffold0166 (91-250)||(11027-11188)
[»] scaffold0026 (1 HSPs)
scaffold0026 (91-229)||(109551-109689)
[»] scaffold0012 (1 HSPs)
scaffold0012 (91-229)||(224133-224271)
[»] scaffold0023 (2 HSPs)
scaffold0023 (91-257)||(11727-11895)
scaffold0023 (177-226)||(93974-94023)
[»] scaffold0013 (1 HSPs)
scaffold0013 (126-258)||(74293-74425)
[»] scaffold1427 (1 HSPs)
scaffold1427 (91-229)||(150-288)
[»] scaffold0337 (1 HSPs)
scaffold0337 (96-229)||(10812-10945)
[»] scaffold0544 (2 HSPs)
scaffold0544 (91-229)||(3507-3645)
scaffold0544 (91-151)||(1-61)
[»] scaffold0372 (1 HSPs)
scaffold0372 (91-258)||(6280-6448)
[»] scaffold0157 (1 HSPs)
scaffold0157 (91-258)||(34090-34256)
[»] scaffold0525 (1 HSPs)
scaffold0525 (91-258)||(5492-5659)
[»] scaffold0486 (1 HSPs)
scaffold0486 (104-235)||(8540-8671)
[»] scaffold0842 (1 HSPs)
scaffold0842 (91-229)||(5192-5330)
[»] scaffold0031 (1 HSPs)
scaffold0031 (132-258)||(37163-37290)
[»] scaffold0380 (2 HSPs)
scaffold0380 (141-258)||(3974-4091)
scaffold0380 (220-258)||(1-39)
[»] scaffold0003 (1 HSPs)
scaffold0003 (91-207)||(70705-70821)
[»] scaffold0299 (1 HSPs)
scaffold0299 (91-235)||(5775-5917)
[»] scaffold0599 (1 HSPs)
scaffold0599 (96-219)||(4076-4199)
[»] scaffold0141 (1 HSPs)
scaffold0141 (105-215)||(15579-15689)
[»] scaffold0029 (1 HSPs)
scaffold0029 (141-258)||(62803-62918)
[»] scaffold0293 (1 HSPs)
scaffold0293 (126-258)||(21300-21425)
[»] scaffold0109 (1 HSPs)
scaffold0109 (141-258)||(37161-37276)
[»] scaffold0139 (2 HSPs)
scaffold0139 (141-220)||(23937-24016)
scaffold0139 (217-258)||(22317-22358)
[»] scaffold0200 (1 HSPs)
scaffold0200 (126-215)||(10752-10841)
[»] scaffold0002 (1 HSPs)
scaffold0002 (91-172)||(115393-115473)
[»] scaffold1873 (3 HSPs)
scaffold1873 (91-150)||(641-700)
scaffold1873 (200-258)||(691-750)
scaffold1873 (126-167)||(592-633)
[»] scaffold0001 (2 HSPs)
scaffold0001 (96-199)||(163588-163691)
scaffold0001 (192-229)||(153803-153840)
[»] scaffold0815 (1 HSPs)
scaffold0815 (166-220)||(35-89)
[»] scaffold0679 (1 HSPs)
scaffold0679 (174-220)||(3265-3311)
[»] scaffold0444 (1 HSPs)
scaffold0444 (177-226)||(12955-13004)
[»] scaffold0254 (1 HSPs)
scaffold0254 (177-226)||(20310-20359)
[»] scaffold0230 (1 HSPs)
scaffold0230 (177-226)||(13518-13567)
[»] scaffold0160 (1 HSPs)
scaffold0160 (188-229)||(19084-19125)
[»] scaffold0145 (1 HSPs)
scaffold0145 (177-226)||(9312-9361)
[»] scaffold0134 (1 HSPs)
scaffold0134 (177-226)||(37385-37434)
[»] scaffold0044 (1 HSPs)
scaffold0044 (177-226)||(39964-40013)
[»] scaffold0016 (1 HSPs)
scaffold0016 (167-220)||(173225-173278)
[»] scaffold2015 (1 HSPs)
scaffold2015 (163-215)||(444-496)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 10607449 - 10607282
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  10607449 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgactaaaagacaacttatcaacttaacataaccatcatcaagtaca 10607350  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10607349 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 10607282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 16582371 - 16582538
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  16582371 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaaaaaaagacaacttatcaacttatcataaccatcatcaagtaca 16582470  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16582471 tttaacaactcataaataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 16582538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 9752636 - 9752469
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| ||||||||    
T  9752636 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaataaaaggcaacttatcaacttaacataaccatcaccaagtaca 9752537  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||    
T  9752536 tttaacaactcatagataacatcatgtaattatcatcactaataacttaaacaacacaatatgatcat 9752469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 7520345 - 7520176
Alignment:
Q  91 acatcatcatttcataataataatt-attcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtac 189  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  7520345 acatcatcatttcataataataatttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataatcatcatcaagtac 7520246  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||| ||||||    
T  7520245 atttaacaactcatagataacatcatgtaatcatcatcactgataactttaaaacaacacaatgtaatca 7520176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 13891580 - 13891718
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13891580 acatcatcaattcataataataattattcatcaaacatctcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 13891679  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13891680 tttaacaactcatagataacatcatgtaatcatcatcac 13891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 91 - 232
Target Start/End: Complemental strand, 39268442 - 39268301
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  39268442 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaataaaaggcaacttatcaacttaacataaccatcatcaagtaca 39268343  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaa 232  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39268342 tttaacaactcatagataacatcatgtaatcatcatcactaa 39268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 31675 - 31844
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  31675 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 31774  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  31775 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 31844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 12706251 - 12706082
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  12706251 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 12706152  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12706151 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 12706082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 12713490 - 12713659
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  12713490 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 12713589  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12713590 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 12713659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 12722148 - 12722317
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  12722148 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 12722247  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12722248 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 12722317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 16908638 - 16908469
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  16908638 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 16908539  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  16908538 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 16908469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 39721145 - 39721314
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaac-ttaacacaaccatcatcaagtac 189  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  39721145 acatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagtac 39721244  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| ||  |||||||||||| ||||||    
T  39721245 atttaacaactcatagatatcatcatgtaatcatcattactaataactttaaaacaacacaatgtaatca 39721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 11660232 - 11660370
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  11660232 acatcataatttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttaccaacttaacataaccatcatcaagtaca 11660331  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11660332 tttaacaactcatagataacatcatgtaatcatcatcac 11660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 12717237 - 12717406
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||| ||||||||    
T  12717237 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcagcaagtaca 12717336  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12717337 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 12717406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 15083175 - 15083344
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaa-cttaacacaaccatcatcaagtac 189  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  15083175 acatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaattttaacataaccatcatcaagtac 15083274  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
    | ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  15083275 acttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 15083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 18277944 - 18278113
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  18277944 acatcattaattcataataataattattcatcaaacatctcattatcaattcatcaataaaagacaacttatcaatttaacataaacatcatcaagtaca 18278043  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| ||||||| |||||||||||||||||| ||  ||||||||||||||||||||    
T  18278044 cttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatataatcat 18278113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 18281908 - 18282077
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  18281908 acatcattaattcataataataattattcatcaaacatctcattatcaattcatcaataaaagacaacttatcaatttaacataaacatcatcaagtaca 18282007  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| ||||||||||||||||||||||| || ||  ||||||||||||||||||||    
T  18282008 cttaacaactcatagatatcatcatgtaatcatcatcactaaaaactttaaaacaacacaatataatcat 18282077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 20486733 - 20486859
Alignment:
Q  132 attatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcacta 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20486733 attatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcacta 20486832  T
Q  232 ataaattaaacaacacaatataatcat 258  Q
    |||| ||||||||||||||||||||||    
T  20486833 ataacttaaacaacacaatataatcat 20486859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 225
Target Start/End: Original strand, 13891963 - 13892097
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  13891963 acatcatcaattcataataataattattcatcaaacatctcattagcaattcatgcaaaaaagacaacttatcaacttaacataaccatcatcaagtaca 13892062  T
Q  191 tttaacaactcatagataacatcatgtaatcatca 225  Q
    |||||||||||||||||||||||||||||||||||    
T  13892063 tttaacaactcatagataacatcatgtaatcatca 13892097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 14420737 - 14420875
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14420737 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 14420836  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  14420837 tttaacaactcatagataacatcacataatcatcatcac 14420875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 18871247 - 18871385
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18871247 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 18871346  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  18871347 tttaacaactcatagataacatcacataatcatcatcac 18871385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 101 - 242
Target Start/End: Original strand, 26291116 - 26291258
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaactt-aacacaaccatcatcaagtacatttaacaac 199  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  26291116 ttcataataataattattcgtcaaacatctcattattaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaac 26291215  T
Q  200 tcatagataacatcatgtaatcatcatcactaataaattaaac 242  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  26291216 tcatagataacatcatgtaatcatcatcactaataacttaaac 26291258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 2833610 - 2833442
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  2833610 acatcattaattcataataataattattcattgaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 2833511  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  2833510 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 2833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 91 - 227
Target Start/End: Original strand, 18424185 - 18424321
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  18424185 acatcattaattcataataataattattcatcaaccatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 18424284  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatc 227  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18424285 tttaacaactcatagataatatcatgtaatcatcatc 18424321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 838262 - 838123
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  838262 acatcatcaattcataataataattattcatcaaacattttattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 838163  T
Q  191 tttaacaactcatag-ataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  838162 tttaacaactcatagcttaacatcatgtaatcatcatcac 838123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 1203442 - 1203303
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1203442 acatcatcaattcataataataattattcatcaaacattttattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 1203343  T
Q  191 tttaacaactcatag-ataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  1203342 tttaacaactcatagcttaacatcatgtaatcatcatcac 1203303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 16110104 - 16109965
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  16110104 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagataacttatcaacttaacataaccatcatcaagtaca 16110005  T
Q  191 tttaacaactcatag-ataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  16110004 tttaacaactcatagcttaacatcatgtaatcatcatcac 16109965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 10898025 - 10897887
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10898025 acatcatcatttcataataataattattcataaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 10897926  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||| |||||||||||||||||  |||||||||||||    
T  10897925 tttaacgactcatagataacatcacataatcatcatcac 10897887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 16004954 - 16005092
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16004954 acatcatcatttcataataatagttattcatcgaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 16005053  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  16005054 tttaacaactcatagataacatcacataatcatcatcac 16005092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 1860119 - 1859982
Alignment:
Q  122 caaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| |||||||| |||||||    
T  1860119 caaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacgtcatcaagtacatttaacaactcatatataacatcctgtaatc 1860020  T
Q  222 atc-atcactaataaattaaacaacacaatataatcat 258  Q
    ||| ||||||||||| ||||||||||||||||||||||    
T  1860019 atcaatcactaataacttaaacaacacaatataatcat 1859982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 126 - 258
Target Start/End: Complemental strand, 25928465 - 25928332
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 225  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25928465 catctcattagcaattcatgaataaaaaacaacttatcaacttaacataaccatcataaagtacatttaacaactcatagataacatcatgtaatcatca 25928366  T
Q  226 tcactaataa-attaaacaacacaatataatcat 258  Q
    ||||||||||  ||||||||||||||||||||||    
T  25928365 tcactaataactttaaacaacacaatataatcat 25928332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 834174 - 834035
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  834174 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaga 834075  T
Q  191 tttaacaactcatag-ataacatcatgtaatcatcatcac 229  Q
     ||||||||||||||  |||||||||||||||||||||||    
T  834074 attaacaactcatagcttaacatcatgtaatcatcatcac 834035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 1199354 - 1199215
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  1199354 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaga 1199255  T
Q  191 tttaacaactcatag-ataacatcatgtaatcatcatcac 229  Q
     ||||||||||||||  |||||||||||||||||||||||    
T  1199254 attaacaactcatagcttaacatcatgtaatcatcatcac 1199215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 18606285 - 18606426
Alignment:
Q  91 acatcatcatttcataa---taataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagt 187  Q
    |||||||||||||||||   |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18606285 acatcatcatttcataataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 18606384  T
Q  188 acatttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  18606385 acatttaacaactcatagataacatcacataatcatcatcac 18606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 146450 - 146588
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| || |||||||||||||||||||||| |||||||||||||||||    
T  146450 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgagtagaagacaacttatcaacttaacataaccatcatcaagtaca 146549  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||   |||||||||||||    
T  146550 tttaacaactcatagataacatcgcataatcatcatcac 146588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 2531460 - 2531293
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  2531460 acatcattaattcataataataattattcataaaacatctctttatcaattcatgaataaaagacaacttatcaacttaacataa-catcatcaagtaca 2531362  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
      |||||||||||||||| | |||| ||||||||||||||||||| ||  |||||||||||| ||||||    
T  2531361 cctaacaactcatagatatcttcatataatcatcatcactaataactttaaaacaacacaatgtaatca 2531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 126 - 258
Target Start/End: Complemental strand, 13919506 - 13919373
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatc- 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| |||||||| ||||||||||     
T  13919506 catctcattatcaattcatgaataaaagacaacttatcaacttaacataaacgtcatcaagtacatttaacaactcatatataacatcctgtaatcatca 13919407  T
Q  225 atcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||| ||||||||||||||||||||||    
T  13919406 atcactaataacttaaacaacacaatataatcat 13919373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 41283595 - 41283724
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  41283595 acatcatcatttcataataataatttttcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagtaca 41283694  T
Q  191 tttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||||||| |||| |||||||||    
T  41283695 tttaacaactcataggtaacctcatgtaat 41283724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 72500 - 72376
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  72500 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 72401  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||| ||||||||| ||||||    
T  72400 cttaacaattcatagatatcatcat 72376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 76609 - 76485
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  76609 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 76510  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||| ||||||||| ||||||    
T  76509 cttaacaattcatagatatcatcat 76485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 45171615 - 45171505
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||    
T  45171615 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcata 45171516  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  45171515 gatatcatcat 45171505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 15213003 - 15213126
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||| ||||||| |||||||||||||||| |||||||||| |||| |||||||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  15213003 atcaattcataacaataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagtacatttaa 15213102  T
Q  196 caactcatagataacatcatgtaa 219  Q
    |||||||| |||||||||||||||    
T  15213103 caactcatggataacatcatgtaa 15213126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 18301373 - 18301466
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatc 256  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18301373 caacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatc 18301466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 15166200 - 15166293
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatca 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  15166200 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 15166293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 9752720 - 9752644
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  9752720 acatcatcaattcataataataattattcatcaaacatctcattataaattcatggataaaagacaacttatcaact 9752644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 11302267 - 11302350
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatca 184  Q
    ||||||||||||||||||||||||||||  ||||| || | ||||||||||||||||||||||||||||||| |||||||||||    
T  11302267 ttcataataataattattcatcaaacattccattagcattacatgaataaaagacaacttatcaacttaacataaccatcatca 11302350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 16185524 - 16185603
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||| ||||| ||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  16185524 tcatgaatagaagacgacttatcaacttaacatgaccctcatcaagtacatttaacaactcataggtaacatcatgtaat 16185603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 11394936 - 11394878
Alignment:
Q  162 tcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||    
T  11394936 tcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaat 11394878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 9752804 - 9752728
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    ||||||| | ||| |||||||| || | || ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  9752804 acatcattaattcgtaataatatttctccaccaagcatctcattatcaattcatgaataaaagataacttatcaact 9752728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 23666539 - 23666460
Alignment:
Q  132 attatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacat 212  Q
    |||| ||| ||||||||| | ||||||||| |||||  ||  ||| |||||||||||||||||||||||||||||||||||    
T  23666539 attaacaactcatgaatagaggacaacttagcaactatacgtaac-atcatcaagtacatttaacaactcatagataacat 23666460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 455893 - 455942
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  455893 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 455942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 11393866 - 11393817
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  11393866 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 11393817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 11972059 - 11972108
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  11972059 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 11972108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 14949720 - 14949671
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  14949720 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 14949671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 15377312 - 15377263
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  15377312 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 15377263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 16232083 - 16232132
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  16232083 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 16232132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 16409631 - 16409680
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  16409631 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 16409680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 20385721 - 20385672
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  20385721 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 20385672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 21190194 - 21190145
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  21190194 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 21190145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 24701818 - 24701867
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  24701818 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 24701867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 24704268 - 24704317
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  24704268 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 24704317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 26356549 - 26356500
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  26356549 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 26356500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 26359001 - 26358952
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  26359001 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 26358952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 27216438 - 27216487
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  27216438 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 27216487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 32125062 - 32125111
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  32125062 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 32125111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 41522500 - 41522549
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  41522500 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 41522549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 41524962 - 41525011
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  41524962 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 41525011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 39268526 - 39268450
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    ||||||| ||||| ||| || |||| | || ||| |||||||||| ||| ||||||||| |||||||||||||||||    
T  39268526 acatcattatttcgtaacaacaattctccaccaagcatctcattagcaactcatgaatagaagacaacttatcaact 39268450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 29795214 - 29795251
Alignment:
Q  192 ttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||  |||||||||||||    
T  29795214 ttaacaactcatagataacatcacataatcatcatcac 29795251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 29799033 - 29799070
Alignment:
Q  192 ttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||  |||||||||||||    
T  29799033 ttaacaactcatagataacatcacataatcatcatcac 29799070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 13891907 - 13891955
Alignment:
Q  119 catcaaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    |||||| |||||||||| ||| ||||||||| ||||||||||| |||||    
T  13891907 catcaagcatctcattagcaactcatgaatagaagacaacttagcaact 13891955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 12853492 - 12853325
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12853492 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 12853393  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12853392 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 12853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 16795453 - 16795620
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16795453 acatcatcaattcataataataattattcatcaaacgtctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 16795552  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16795553 tttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcat 16795620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 7108188 - 7108357
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  7108188 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 7108287  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  7108288 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 7108357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 7112123 - 7112292
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  7112123 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 7112222  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  7112223 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 7112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 11068563 - 11068732
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  11068563 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 11068662  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  11068663 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 11068732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 22320079 - 22320248
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  22320079 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 22320178  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  22320179 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 22320248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 22335134 - 22335303
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  22335134 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 22335233  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  22335234 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 22335303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 55021326 - 55021495
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  55021326 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 55021425  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  55021426 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 55021495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 5219797 - 5219965
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  5219797 acatcattaattcataataataattattcatcaaacgtctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 5219896  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  5219897 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 5219965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 11301794 - 11301626
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  11301794 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 11301695  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| ||||||| |||||||||||||||||| ||  |||||||||||| ||||||    
T  11301694 cttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 11301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 91 - 226
Target Start/End: Complemental strand, 10835070 - 10834935
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10835070 acatcatcatttcataataataattattcatcaaacatttcattagaaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 10834971  T
Q  191 tttaacaactcatagataacatcatgtaatcatcat 226  Q
    ||||||||||||||||||||||||||||||||||||    
T  10834970 tttaacaactcatagataacatcatgtaatcatcat 10834935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 11167222 - 11167053
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||| |    
T  11167222 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaaa 11167123  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  11167122 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 11167053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 13435768 - 13435906
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13435768 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 13435867  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  13435868 tttaacaactcatatataacatcatgtaatcatcatcac 13435906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 28948411 - 28948580
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  28948411 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 28948510  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||| ||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  28948511 cttaacaacttatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 28948580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 30064334 - 30064486
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaactt-aacacaaccatcatcaagtac 189  Q
    ||||||| | ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  30064334 acatcattaattcataataataattattcgtcaaacatctcattattaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagtac 30064433  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcactaataaattaaac 242  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30064434 acttaacaactcatagataacatcatgtaatcatcatcactaataacttaaac 30064486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 101 - 257
Target Start/End: Original strand, 11853666 - 11853824
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaact 200  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  11853666 ttcataataatacttattcatcaaacatctcattatcaattcgtgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaact 11853765  T
Q  201 catagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
    |||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  11853766 catagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 11853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 14764924 - 14764786
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14764924 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 14764825  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  14764824 tttaacaactcatagataacatcacataatcatcatcac 14764786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 15616127 - 15616296
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||| |||||||||    
T  15616127 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcttcaagtaca 15616226  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||| |||||||||    
T  15616227 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacattataatcat 15616296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 3801920 - 3802058
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3801920 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 3802019  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  3802020 tttaacaactcatagataacatcacataatcatcatcac 3802058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 8928996 - 8928858
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  8928996 acatcatcaattcataataataattattcatcaaacatctcattagcagtccatgaataaaagacaacttatcaacttaacataaccaccatcaagtaca 8928897  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  8928896 tttaacaactcatagataacatcatgcaatcatcatcac 8928858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 14497898 - 14498066
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  14497898 acatcattaattcataataataattattcatcaa-catctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 14497996  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  14497997 cttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcat 14498066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 101 - 242
Target Start/End: Complemental strand, 18933475 - 18933333
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaactt-aacacaaccatcatcaagtacatttaacaac 199  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  18933475 ttcataataataattattcgtcaaacatctcattattaattcatgaataaaatacaacttatcaactttaacataaccatcatcaagtacacttaacaac 18933376  T
Q  200 tcatagataacatcatgtaatcatcatcactaataaattaaac 242  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  18933375 tcatagataacatcatgtaatcatcatcactaataacttaaac 18933333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 29546067 - 29545929
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||||||||||||||||| |  ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29546067 acatcatcatttcataataataattattcatcaaaccttccattagcaattcatgactaaaagacaacttatcaacttaacacaaccatcatcaagtaca 29545968  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  29545967 tttaacaactcatagataacatcacataatcatcatcac 29545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 54519547 - 54519685
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  54519547 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 54519646  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  54519647 tttaacaactcatagataacatcacataatcatcatcac 54519685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 14664375 - 14664543
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||    
T  14664375 acatcattaattcataaatataattattcatcaaacatctcattatcaattcatgaatagaagacaacttatcaacttaacataaacatcatcaagtaca 14664474  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| ||| |||||||||||||||||||||| ||  |||||||||||| ||||||    
T  14664475 cttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 14667539 - 14667707
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||    
T  14667539 acatcattaattcataaatataattattcatcaaacatctcattatcaattcatgaatagaagacaacttatcaacttaacataaacatcatcaagtaca 14667638  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||  |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  14667639 cttaacaactcatagatctcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14667707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 9532208 - 9532346
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  9532208 acatcatcatttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaactcaacataaccatcatcaagtaca 9532307  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||   |||||||||||||    
T  9532308 tttaacaactcatagataacatctcataatcatcatcac 9532346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 228
Target Start/End: Original strand, 18899400 - 18899540
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattat---caattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagt 187  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18899400 acatcatcatttcataataataattattcatcaaacattccattattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 18899499  T
Q  188 acatttaacaactcatagataacatcatgtaatcatcatca 228  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  18899500 acatttaacaactcatagataacatcacataatcatcatca 18899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 23372672 - 23372534
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  23372672 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagtaca 23372573  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||| |||||||||  |||||||||||||    
T  23372572 tttaacaactcataaataacatcacataatcatcatcac 23372534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 51299483 - 51299621
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  51299483 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagtaca 51299582  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||| |||||||||  |||||||||||||    
T  51299583 tttaacaactcataaataacatcacataatcatcatcac 51299621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 14670017 - 14670140
Alignment:
Q  132 attatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcacta 231  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  14670017 attatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgta---atcatcacta 14670113  T
Q  232 ataaattaaacaacacaatataatcat 258  Q
    |||| ||||||||||||||||||||||    
T  14670114 ataacttaaacaacacaatataatcat 14670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 91 - 227
Target Start/End: Original strand, 19774148 - 19774284
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  19774148 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 19774247  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatc 227  Q
    |||||||||||| ||| || |||||||||||||||||    
T  19774248 tttaacaactcacagacaatatcatgtaatcatcatc 19774284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 20249978 - 20249840
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||| ||||||||| || ||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20249978 acatcatcatttcataataatagttattcatcgaatattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 20249879  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  20249878 tttaacaactcatagataacatcacataatcatcatcac 20249840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 126 - 258
Target Start/End: Original strand, 15463863 - 15463996
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatc- 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| |||||||| ||||||||||     
T  15463863 catctcattatcaattcatgaataaaagacaacttatcaacttaacataaacgtcatcaagtacatttaacaactcatatataacatcctgtaatcatca 15463962  T
Q  225 atcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||| ||||||||||||||||||||||    
T  15463963 atcactaataacttaaacaacacaatataatcat 15463996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 91 - 226
Target Start/End: Complemental strand, 16752030 - 16751895
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||||||||||||||| || ||||||||||||||    
T  16752030 acatcattaattcataataataattattcatcaaccatctcattatcatttgatgaataaaagataacttatcaacttaacataaacatcatcaagtaca 16751931  T
Q  191 tttaacaactcatagataacatcatgtaatcatcat 226  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16751930 tttaacaactcatagataatatcatgtaatcatcat 16751895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 41084 - 41213
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  41084 acatcatcatttcataataataattattcctcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagtaca 41183  T
Q  191 tttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||||||| |||| |||||||||    
T  41184 tttaacaactcataggtaacctcatgtaat 41213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 4590239 - 4590124
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  4590239 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaa 4590140  T
Q  241 acaacacaatataatc 256  Q
    || |||||||||||||    
T  4590139 actacacaatataatc 4590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 14681541 - 14681662
Alignment:
Q  132 attatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcacta 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||   ||||||||||    
T  14681541 attatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactc--agataacatcatgta---atcatcacta 14681635  T
Q  232 ataaattaaacaacacaatataatcat 258  Q
    |||| ||||||||||||||||||||||    
T  14681636 ataacttaaacaacacaatataatcat 14681662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 12337206 - 12337348
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctc-attatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtac 189  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| || |||||||||||||    
T  12337206 acatcatcaattcataataatacttattcatcaaacatctcaattatcaattcatgaataaaagacaac-tatcaatttaacataaacatcatcaagtac 12337304  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcactaataa 235  Q
    | ||||||||||||  ||| ||||||||||||||||||||||||||    
T  12337305 acttaacaactcat--atatcatcatgtaatcatcatcactaataa 12337348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 17318588 - 17318471
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||    
T  17318588 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacttcatgtattcatcatcactaataacttaa 17318489  T
Q  241 acaacacaatataatcat 258  Q
    || |||||||||||||||    
T  17318488 actacacaatataatcat 17318471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 11912382 - 11912505
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||| ||||||| |||||||||||||||| |||||||||| |||| |||||||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  11912382 atcaattcataacaataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagtacatttaa 11912481  T
Q  196 caactcatagataacatcatgtaa 219  Q
    ||||||||||||||||||||||||    
T  11912482 caactcatagataacatcatgtaa 11912505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 4108918 - 4108793
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  4108918 acatcattaattcataataataattattcatcaaatatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 4108819  T
Q  191 -tttaacaactcatagataacatcat 215  Q
     |||||||||||||||||| ||||||    
T  4108818 ctttaacaactcatagatatcatcat 4108793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 4112767 - 4112642
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  4112767 acatcattaattcataataataattattcatcaaatatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 4112668  T
Q  191 -tttaacaactcatagataacatcat 215  Q
     |||||||||||||||||| ||||||    
T  4112667 ctttaacaactcatagatatcatcat 4112642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 14068141 - 14068024
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| ||||    
T  14068141 tcatgaatagaagacaacttatcgacttaacataaccatcatcaaatacatttagcaactcctagataacatcatgtaatcatcatcactaataacttaa 14068042  T
Q  241 acaacacaatataatcat 258  Q
    || |||||||||||||||    
T  14068041 actacacaatataatcat 14068024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 12304136 - 12304262
Alignment:
Q  104 ataataata-attattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactca 202  Q
    ||||||||| || |||||||||||||  ||| | |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12304136 ataataatatataattcatcaaacattccatcagcaattcatgaataaaatacaacttatcaacttaacataaccatcatcaagtacatttaacaactca 12304235  T
Q  203 tagataacatcatgtaatcatcatcac 229  Q
    |||||||||||   |||||||||||||    
T  12304236 tagataacatctcataatcatcatcac 12304262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 15963461 - 15963571
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || |||||||||||||| |||| ||||||||    
T  15963461 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttattaatttaacataaacatcatcaagtacacttaataactcata 15963560  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  15963561 gatatcatcat 15963571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 15967385 - 15967495
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || |||||||||||||| |||| ||||||||    
T  15967385 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttattaatttaacataaacatcatcaagtacacttaataactcata 15967484  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  15967485 gatatcatcat 15967495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 15971309 - 15971419
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || |||||||||||||| |||| ||||||||    
T  15971309 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttattaatttaacataaacatcatcaagtacacttaataactcata 15971408  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  15971409 gatatcatcat 15971419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 38312985 - 38312848
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacat-ctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtac 189  Q
    |||||||||||||||||||||||| ||||||| ||||| | ||||| || ||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  38312985 acatcatcatttcataataataat-attcatcgaacattcccattagca-ttcatgaataaaagacaacttataaacttaacataaccatcatcaagtac 38312888  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||| |||||||||||||| ||  ||||||| |||||    
T  38312887 atttaaccactcatagataacaccacataatcattatcac 38312848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 16326158 - 16326041
Alignment:
Q  104 ataataata-attattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactca 202  Q
    ||||||||| || |||||||||||||  ||||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  16326158 ataataatatataattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttgacataaccctcatcaagtacatttaacaactca 16326059  T
Q  203 tagataacatcatgtaat 220  Q
    ||| |||| |||||||||    
T  16326058 taggtaacctcatgtaat 16326041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 16840327 - 16840204
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||| ||||||| |||||||||||| |||  ||||||||| |||| |||||||||   ||||||||||||||||||| |||||||||||| |||||||||    
T  16840327 atcaattcataacaataattattcagcaagaatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaaatacatttaa 16840228  T
Q  196 caactcatagataacatcatgtaa 219  Q
    |||||||||||||| |||||||||    
T  16840227 caactcatagataaaatcatgtaa 16840204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 23173282 - 23173386
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatag-ataacatcatgtaatcatc 224  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  23173282 catctcattaacaactcatgaatagaagacaacttatcaacttaacataactatcatcaagtatatttaacaactcatagcttaacatcatgtaatcatc 23173381  T
Q  225 atcac 229  Q
    |||||    
T  23173382 atcac 23173386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 8491811 - 8491732
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  8491811 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 8491732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 37440731 - 37440641
Alignment:
Q  169 aacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  37440731 aacataaccatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 37440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 17348856 - 17348806
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaatt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17348856 acatcatcatttcataataataattattcatcaaacatctcattatcaatt 17348806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 15555602 - 15555669
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaaca 172  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||    
T  15555602 taataataattcttcatcaaacatctcattagcaactcatgaatataagacaacttaacaacttaaca 15555669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 5841187 - 5841245
Alignment:
Q  162 tcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||    
T  5841187 tcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaat 5841245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 2249273 - 2249216
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  2249273 caacttaacataaccctcatcaagtacatttaataactcataggtaacatcatgtaat 2249216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 15564801 - 15564882
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaaca 172  Q
    ||||||||| ||||||||||||||| ||||| |||||| |||||| ||| ||||||| | ||||||||  ||||||||||||    
T  15564801 acatcatcaattcataataataattcttcataaaacatttcattagcaactcatgaacagaagacaacacatcaacttaaca 15564882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 45221019 - 45220962
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||    
T  45221019 caacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaat 45220962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 7781907 - 7781858
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  7781907 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 7781858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 9708205 - 9708156
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  9708205 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 9708156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 13152374 - 13152325
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  13152374 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 13152325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 16454871 - 16454822
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  16454871 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 16454822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 17462741 - 17462790
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  17462741 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 17462790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 34158889 - 34158938
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  34158889 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 34158938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 45607490 - 45607441
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  45607490 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 45607441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 55476085 - 55476134
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  55476085 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 55476134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 55500514 - 55500563
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  55500514 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 55500563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 14648327 - 14648275
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcat 215  Q
    |||||||||| |||| || || ||||||||||||||||||||| |||||||||    
T  14648327 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 14648275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 10248291 - 10248256
Alignment:
Q  191 tttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||||||||| |||||||||||||||||||    
T  10248291 tttaacaactcatagacaacatcatgtaatcatcat 10248256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 8490395 - 8490353
Alignment:
Q  216 gtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  8490395 gtaatcaccatcactaataacttaaactacacaatataatcat 8490353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 12853545 - 12853500
Alignment:
Q  122 caaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    |||||||||||||| ||| ||||||||| ||||||||||| |||||    
T  12853545 caaacatctcattagcaactcatgaatagaagacaacttaacaact 12853500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 13154839 - 13154790
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | |||||||||||||||||  ||||||||||||||||||    
T  13154839 catcatcaatcatatttaacaactcatagactacatcatgtaatcatcat 13154790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 15555379 - 15555428
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||| ||||||| |||||||||||||||||||    
T  15555379 catcatcaatcatatttaacaattcatagacaacatcatgtaatcatcat 15555428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 6e-83; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 22120720 - 22120553
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22120720 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 22120621  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  22120620 tttaacaactcatagataacatcatataatcatcatcactaataaattaaataacacaatataatcat 22120553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 15238246 - 15238079
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  15238246 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 15238147  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  15238146 tttaacaactcatagataacatcatgtaatcatcatcactaataacttaaactacacaatataatcat 15238079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 20912381 - 20912214
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  20912381 acatcattaattcataacaataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacatacacatcatcaagtaca 20912282  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  20912281 cttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaatacaatataatcat 20912214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 22108577 - 22108411
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||  ||| |||||||||||||    
T  22108577 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaattatacgtaac-atcatcaagtaca 22108479  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  22108478 tttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatagaatcat 22108411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 20294464 - 20294633
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  20294464 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 20294563  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  20294564 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 20294633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 101 - 258
Target Start/End: Complemental strand, 19474291 - 19474132
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaact 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||| |||||||||    
T  19474291 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaact 19474192  T
Q  201 catagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
    |||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  19474191 catagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 19474132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 18354760 - 18354915
Alignment:
Q  104 ataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcat 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||||||    
T  18354760 ataataataattattcatcaaacatctcattatcaattcatgaataaaagacaatttatcaacttaacataaacatcatcaagtacacttaacaactcat 18354859  T
Q  204 agataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
    ||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  18354860 agatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 18354915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 90 - 229
Target Start/End: Complemental strand, 28372211 - 28372072
Alignment:
Q  90 gacatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtac 189  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28372211 gacatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtac 28372112  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  28372111 atttaacaactcatagataacatcacataatcatcatcac 28372072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 250
Target Start/End: Complemental strand, 24768691 - 24768530
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  24768691 acatcattaattcataatattaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaggtaca 24768592  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaat 250  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  24768591 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 24768530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 37600137 - 37599999
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37600137 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 37600038  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  37600037 tttaacaactcatagataacatcacataatcatcatcac 37599999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 23113531 - 23113393
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23113531 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacacaatcatcatcaagtaca 23113432  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  23113431 tttaacaactcatagataacatcacataatcatcatcac 23113393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 38146547 - 38146409
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  38146547 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataatcatcatcaagtaca 38146448  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  38146447 tttaacaactcatagataacatcacataatcatcatcac 38146409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 19510412 - 19510550
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||||||||||||||||| |  ||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  19510412 acatcatcatttcataataataattattcatcaaacgttccattagcaattcatgaataaaagacaacctatcaacttaacataaccatcatcaagtaca 19510511  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  19510512 tttaacaactcatagataacatcacataatcatcatcac 19510550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 22338962 - 22339100
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  22338962 acatcattatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacgtaacataaccatcatcaagtaca 22339061  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  22339062 tttaacaactcatagataacatcacataatcatcatcac 22339100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 101 - 258
Target Start/End: Complemental strand, 40727517 - 40727361
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaact 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||   |||||||    
T  40727517 ttcataataataattattcatcaaacatctctttatcaattcatgaataaaagataacttatcaacttaacataa-catcatcaagtacaccaaacaact 40727419  T
Q  201 catagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
     ||||||| | |||||||||||||||||||||||| |||||| |||||||||||||||    
T  40727418 tatagatatcttcatgtaatcatcatcactaataacttaaactacacaatataatcat 40727361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 91 - 227
Target Start/End: Original strand, 10751767 - 10751903
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  10751767 acatcattaattcataataataattattcatcaaccatctcattatcatttcttgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 10751866  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatc 227  Q
    ||||||||||||||||||| |||||||||||||||||    
T  10751867 tttaacaactcatagataatatcatgtaatcatcatc 10751903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 22335432 - 22335570
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  22335432 acatcattatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacgtaacataaccatcatcaaataca 22335531  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  22335532 tttaacaactcatagataacatcacataatcatcatcac 22335570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 41878780 - 41878642
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  41878780 acatcatcattccataataataattattcatcaaacattccattagcaattcataaataaaagacaacttatcaacttaacataactatcatcaagtaca 41878681  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  41878680 tttaacaactcatagataacatcacataatcatcatcac 41878642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 33474060 - 33473931
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  33474060 acatcatcatttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagtaca 33473961  T
Q  191 tttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||||| | |||| |||||||||    
T  33473960 tttaacaactcatgggtaacctcatgtaat 33473931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 11219505 - 11219629
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  11219505 acatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagtaca 11219604  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  11219605 cttaacaactcatagatatcatcat 11219629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 11224091 - 11224215
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| || ||||||||||||||    
T  11224091 acatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagtaca 11224190  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  11224191 cttaacaactcatagatatcatcat 11224215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 11227913 - 11228037
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| || ||||||||||||||    
T  11227913 acatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagtaca 11228012  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  11228013 cttaacaactcatagatatcatcat 11228037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 11226107 - 11226231
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||| ||||| || |||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| || ||||||||||||||    
T  11226107 acatcattaattcgtaatagtacttattcatcaaacatctcatgatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagtaca 11226206  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  11226207 cttaacaactcatagatatcatcat 11226231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 11229903 - 11230027
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||| ||||| || |||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| || ||||||||||||||    
T  11229903 acatcattaattcgtaatagtacttattcatcaaacatctcatgatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagtaca 11230002  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  11230003 cttaacaactcatagatatcatcat 11230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 36459503 - 36459626
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||| ||||||| |||||||||||||||| |||||||||| |||  |||||||||   ||||||||||||||||||| || |||||| ||||||||||||    
T  36459503 atcaattcataacaataattattcatcaaccatctcattagcaaaacatgaataaggaacaacttatcaacttaacataatcatcattaagtacatttaa 36459602  T
Q  196 caactcatagataacatcatgtaa 219  Q
    ||||||||||||||||||||||||    
T  36459603 caactcatagataacatcatgtaa 36459626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 22749152 - 22749249
Alignment:
Q  132 attatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||| ||| ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  22749152 attaacaactcatgaatataggacaacttatcaacttaacataaccatcatcaagtacatttaaccactcatagataacatcacataatcatcatcac 22749249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 19075911 - 19075968
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||    
T  19075911 caacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaat 19075968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 9774932 - 9775014
Alignment:
Q  132 attatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcat 215  Q
    |||| ||| ||||||||| | ||||||||| |||||  ||  ||| ||||||||||||||||||||||||||||||||||||||    
T  9774932 attaacaactcatgaatagaggacaacttagcaactatacgtaac-atcatcaagtacatttaacaactcatagataacatcat 9775014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 265360 - 265311
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  265360 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 265311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 10733530 - 10733481
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  10733530 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 10733481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 20908575 - 20908624
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  20908575 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 20908624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 22335595 - 22335636
Alignment:
Q  188 acatttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  22335595 acatttaacaactcatagataacatcacataatcatcatcac 22335636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 22339125 - 22339166
Alignment:
Q  188 acatttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  22339125 acatttaacaactcatagataacatcacataatcatcatcac 22339166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 28372047 - 28372006
Alignment:
Q  188 acatttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  28372047 acatttaacaactcatagataacatcacataatcatcatcac 28372006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 29345544 - 29345593
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  29345544 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 29345593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 29348025 - 29348074
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  29348025 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 29348074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 29350498 - 29350547
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  29350498 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 29350547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 31143851 - 31143900
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  31143851 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 31143900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 31253267 - 31253210
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||||||| |||| ||||||||||||||||||||||  ||| |||| |||||||||    
T  31253267 caacttaacataaccctcatcaagtacatttaacaacttgtaggtaacctcatgtaat 31253210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 42245955 - 42245906
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  42245955 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 42245906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 43243816 - 43243764
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcat 215  Q
    |||||||||| |||| || || ||||||||||||||||||||| |||||||||    
T  43243816 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 43243764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 39362993 - 39363027
Alignment:
Q  192 ttaacaactcatagataacatcatgtaatcatcat 226  Q
    ||||||||||||||| |||||||||||||||||||    
T  39362993 ttaacaactcatagacaacatcatgtaatcatcat 39363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 6e-83; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 22132227 - 22132060
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22132227 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 22132128  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22132127 tttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcat 22132060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 105 - 258
Target Start/End: Complemental strand, 41801393 - 41801240
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| || | || ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41801393 taataatatttctccaccaagcatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcata 41801294  T
Q  205 gataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41801293 gataatatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 41801240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 1009212 - 1009381
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  1009212 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 1009311  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  1009312 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 1009381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 1926924 - 1926755
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  1926924 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 1926825  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  1926824 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 1926755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 16376944 - 16376775
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  16376944 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 16376845  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  16376844 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 16376775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 20925938 - 20925769
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  20925938 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 20925839  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  20925838 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 20925769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 33795983 - 33796151
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  33795983 acatcattaattcataataataattattcatcaaacatatcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 33796082  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  33796083 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 33796151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 101 - 242
Target Start/End: Complemental strand, 20230258 - 20230116
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaactt-aacacaaccatcatcaagtacatttaacaac 199  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  20230258 ttcataataataattattcatcaaacatctcattattaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagtacacttaacaac 20230159  T
Q  200 tcatagataacatcatgtaatcatcatcactaataaattaaac 242  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  20230158 tcatagataacatcatgtaatcatcatcactaataacttaaac 20230116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 52634218 - 52634387
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||| || ||||||||||||||    
T  52634218 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaaaataacttatcaatttaacataaacatcatcaagtaca 52634317  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  52634318 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 52634387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 16370875 - 16371013
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16370875 acatcatcatttcataataatagttattcatcgaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 16370974  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  16370975 tttaacaactcatagataacatcacataatcatcatcac 16371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 91 - 227
Target Start/End: Complemental strand, 41389793 - 41389657
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  41389793 acatcattaattcataataataattattcatcaaccatctcattatcatttcatgaataaaaaacaacttatcaacttaacataaacatcatcaagtaca 41389694  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatc 227  Q
    ||||||||||||||||||| |||||||||||||||||    
T  41389693 tttaacaactcatagataatatcatgtaatcatcatc 41389657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 227
Target Start/End: Complemental strand, 39245297 - 39245163
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||| || ||||||||||||||    
T  39245297 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaaga--acttatcaacttaacataaacatcatcaagtaca 39245200  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatc 227  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39245199 tttaacaactcatagataatatcatgtaatcatcatc 39245163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 227
Target Start/End: Complemental strand, 39248852 - 39248718
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||| || ||||||||||||||    
T  39248852 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaaga--acttatcaacttaacataaacatcatcaagtaca 39248755  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatc 227  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39248754 tttaacaactcatagataatatcatgtaatcatcatc 39248718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 32649017 - 32649140
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  32649017 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagtaca 32649116  T
Q  191 tttaacaactcatagataacatca 214  Q
    |||||||||||||| |||||||||    
T  32649117 tttaacaactcataaataacatca 32649140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 21406253 - 21406370
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  21406253 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaa 21406352  T
Q  241 acaacacaatataatcat 258  Q
    || |||||||||||||||    
T  21406353 actacacaatataatcat 21406370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 29533837 - 29533967
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||  |||    
T  29533837 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaaacaca 29533936  T
Q  191 tttaacaactcatag-ataacatcatgtaat 220  Q
    |||||||||||||||  ||||||||||||||    
T  29533937 tttaacaactcatagcttaacatcatgtaat 29533967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 20439281 - 20439188
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatca 184  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20439281 acatcatcattccataataataattattcatcaaacattccattagcaatacatgaataaaagacaacttatcaacttaacataaccatcatca 20439188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 11810025 - 11809949
Alignment:
Q  144 tgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||| ||||| ||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  11810025 tgaatagaagacgacttatcaacttaacatgaccctcatcaagtacatttaacaactcataggtaacatcatgtaat 11809949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 11945016 - 11945073
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||||||| |||| ||||||||||||||||||||||| ||| |||| |||||||||    
T  11945016 caacttaacataaccctcatcaagtacatttaacaactcgtaggtaacctcatgtaat 11945073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 43631049 - 43630992
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||||||| |||| ||||||||||||||||||||||| ||| |||| |||||||||    
T  43631049 caacttaacataaccctcatcaagtacatttaacaactcgtaggtaacctcatgtaat 43630992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 13988473 - 13988522
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  13988473 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 13988522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 21475678 - 21475629
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  21475678 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 21475629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 21923890 - 21923841
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  21923890 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 21923841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 23594326 - 23594277
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  23594326 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 23594277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 20032232 - 20032180
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcat 215  Q
    |||||||||| |||| || || ||||||||||||||||||||| |||||||||    
T  20032232 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 20032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 41372677 - 41372726
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||| ||||||||||||    
T  41372677 catcatcaatcatatttaacaactcatagacaacatcttgtaatcatcat 41372726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 8868 - 8701
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  8868 acatcatcattttataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcatgtaca 8769  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8768 tttaacaactcgtagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 8701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 17052574 - 17052407
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  17052574 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataatcatcatcaagtaca 17052475  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17052474 tttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcat 17052407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 22635055 - 22634888
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22635055 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 22634956  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  22634955 tttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatatgatcat 22634888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 106 - 258
Target Start/End: Original strand, 12422908 - 12423060
Alignment:
Q  106 aataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatag 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  12422908 aataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataactatcatcaagtacatttaacaactcatag 12423007  T
Q  206 ataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12423008 ataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcat 12423060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 23997094 - 23996928
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||    
T  23997094 acatcattaattcataataatgattattcatcaaacatctcattatcaattcatgaataaaagagaacttatcaactta-cataaccatcatcaagtaca 23996996  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23996995 tttaacaactcatagataacatcatgtaatcatcatcactaataacttaaacaacacaatataatcat 23996928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 24048513 - 24048375
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24048513 acatcatcatttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 24048414  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24048413 tttaacaactcatagataacatcatgtaatcatcatcac 24048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 20158576 - 20158408
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  20158576 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataagcatcatcaagtaca 20158477  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  20158476 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 20158408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 9555019 - 9555188
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  9555019 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 9555118  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  9555119 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 9555188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 14759120 - 14758951
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  14759120 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 14759021  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  14759020 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 14758951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 14955888 - 14955719
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  14955888 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 14955789  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  14955788 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 14955719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 33740786 - 33740955
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  33740786 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 33740885  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  33740886 cttaacaactcatagatatcatcatgtaatcatcatcactaataattttaaaacaacacaatataatcat 33740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 232
Target Start/End: Complemental strand, 13813961 - 13813820
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  13813961 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaacaaaaggcaacttatcaacttaacataaccatcatcaagtaca 13813862  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaa 232  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13813861 tttaacaactcatagataacatcatgtaatcatcatcactaa 13813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 232
Target Start/End: Complemental strand, 13818449 - 13818308
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  13818449 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaataaaatgcaacttatcaacttaacataaccatcatcaagtaca 13818350  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaa 232  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13818349 tttaacaactcatagataacatcatgtaatcatcatcactaa 13818308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 20164027 - 20163859
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  20164027 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 20163928  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||||||||| ||||||    
T  20163927 cttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20163859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 4562902 - 4562733
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  4562902 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 4562803  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||| ||||||||||||    
T  4562802 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacccaatataatcat 4562733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 5758584 - 5758415
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  5758584 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 5758485  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  5758484 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatagaatcat 5758415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 25688392 - 25688561
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| || ||||||||||||||    
T  25688392 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagtaca 25688491  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  25688492 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 25688561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 104 - 258
Target Start/End: Original strand, 17807017 - 17807173
Alignment:
Q  104 ataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcat 203  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||    
T  17807017 ataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcat 17807116  T
Q  204 agataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
    ||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  17807117 agatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 17807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 15533169 - 15533307
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15533169 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 15533268  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  15533269 tttaacaactcatagataacatcacataatcatcatcac 15533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 20161252 - 20161084
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| ||||||||||    
T  20161252 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcttgaataaaagacaacttatcaacttaacataaacattatcaagtaca 20161153  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||||||||| ||||||    
T  20161152 cttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 30145733 - 30145872
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30145733 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 30145832  T
Q  191 tttaacaactcatag-ataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  30145833 tttaacaactcatagcttaacatcatgtaatcatcatcac 30145872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 18211554 - 18211692
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  18211554 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaactcaacataaccatcatcaagtaca 18211653  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  18211654 tttaacaactcatagataacatcacataatcatcatcac 18211692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 91 - 227
Target Start/End: Original strand, 15223496 - 15223632
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  15223496 acatcattaattcataataataattattcatcaaccatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 15223595  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatc 227  Q
    ||||||||||||||||||| |||||||||||||||||    
T  15223596 tttaacaactcatagataatatcatgtaatcatcatc 15223632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 631841 - 631711
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 225  Q
    |||||||||| ||| ||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  631841 catctcattagcaactcatgaatagaatacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 631742  T
Q  226 tcactaataaattaaacaacacaatataatc 256  Q
    |||||||||| ||||||||||||||||||||    
T  631741 tcactaataacttaaacaacacaatataatc 631711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 36036902 - 36037040
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36036902 acatcatcatttcataataataattattcatgaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 36037001  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||   |||||||||||||    
T  36037002 tttaacaactcatagataacatctcataatcatcatcac 36037040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 12486221 - 12486387
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  12486221 acatcattaattcataataataattattcatcaaacatctcatcatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 12486320  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||   |||||||||||||| ||  ||||||||||||||||||||    
T  12486321 cttaacaactcatagatatcatcatgta---atcatcactaataactttaaaacaacacaatataatcat 12486387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 49549212 - 49549073
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaact-tatcaacttaacacaaccatcatcaagtac 189  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  49549212 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacggtatcaacttaacataaccatcatcaagtac 49549113  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  49549112 atttaacaactcatagataacatcacataatcatcatcac 49549073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 28384801 - 28384930
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  28384801 acatcatcatttcataataataattattcctcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagtaca 28384900  T
Q  191 tttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||||||| |||| |||||||||    
T  28384901 tttaacaactcataggtaacctcatgtaat 28384930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 27532752 - 27532869
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  27532752 tcatgaatagaaggcaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaa 27532851  T
Q  241 acaacacaatataatcat 258  Q
    || |||||||||||||||    
T  27532852 actacacaatataatcat 27532869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 10711825 - 10711943
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt-- 238  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||      
T  10711825 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttta 10711924  T
Q  239 aaacaacacaatataatca 257  Q
    |||||||||||| ||||||    
T  10711925 aaacaacacaatgtaatca 10711943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 10925595 - 10925713
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt-- 238  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||      
T  10925595 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttta 10925694  T
Q  239 aaacaacacaatataatca 257  Q
    |||||||||||| ||||||    
T  10925695 aaacaacacaatgtaatca 10925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 38106897 - 38107031
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||| |||||||||||| |||||| ||| |||||||| |||||||| |||||||||||||| || |||||||||  | |    
T  38106897 acatcattaattcataataataattcttcatcaaacat-tcattagcaactcatgaatgaaagacaatttatcaacttaacataaacatcatcaatcata 38106995  T
Q  191 tttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||||||||| |||||||||||||||||||    
T  38106996 tttaacaactcatagacaacatcatgtaatcatcat 38107031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 13818533 - 13818457
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  13818533 acatcatcaattcataataataattattcatcaaacatctcattataaattcatggataaaagacaacttatcaact 13818457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 24048597 - 24048521
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  24048597 acatcatcatttcataataataattattcatcaaacatttcattaacaattcatgaataaaagacaacttagcaact 24048521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 22635104 - 22635063
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22635104 catctcattatcaattcatgaataaaagacaacttatcaact 22635063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 38106798 - 38106865
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaaca 172  Q
    ||||||||||| ||||| ||||||||||||| ||| |||| |||| ||||||||||| ||||||||||    
T  38106798 taataataattcttcataaaacatctcattagcaactcataaatagaagacaacttaacaacttaaca 38106865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 14047303 - 14047361
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatca 184  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||| || ||||||||    
T  14047303 catctcattaacaactcatgaataaaatacaacttatcaacttaacataatcatcatca 14047361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 40906323 - 40906390
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaaca 172  Q
    ||||||||||| ||||| |||||| |||||| ||| | ||||||| ||||||||||| ||||||||||    
T  40906323 taataataattcttcataaaacatttcattagcaacttatgaatagaagacaacttaacaacttaaca 40906390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 1838102 - 1838053
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  1838102 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 12033730 - 12033681
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  12033730 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 12033681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 13814014 - 13813969
Alignment:
Q  122 caaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  13814014 caaacatctcattagcaactcatgaatagaagacaacttatcaact 13813969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 13818586 - 13818541
Alignment:
Q  122 caaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  13818586 caaacatctcattagcaactcatgaatagaagacaacttatcaact 13818541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 14739648 - 14739599
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  14739648 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 14739599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 15118951 - 15118902
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  15118951 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 15118902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 29267226 - 29267275
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  29267226 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 29267275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 44614851 - 44614900
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  44614851 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 44614900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 50222938 - 50222889
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  50222938 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 50222889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 18240005 - 18239969
Alignment:
Q  190 atttaacaactcatagataacatcatgtaatcatcat 226  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18240005 atttaacaactcatagacaacatcatgtaatcatcat 18239969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 30145684 - 30145725
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    |||||||||| ||| ||||||||| |||||||||||||||||    
T  30145684 catctcattaacaactcatgaatagaagacaacttatcaact 30145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 37839248 - 37839211
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaact 200  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  37839248 caacttaacataaccctcatcaagtacatttaacaact 37839211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 42597977 - 42597940
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaact 200  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  42597977 caacttaacataaccctcatcaagtacatttaacaact 42597940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 12422843 - 12422891
Alignment:
Q  119 catcaaacatctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    |||||| |||||||||| ||| ||||||||| ||||||||||| |||||    
T  12422843 catcaagcatctcattagcaactcatgaatagaagacaacttagcaact 12422891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 25696 - 25529
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25696 acatcatcaattcataataataattattcatcaaacatcacattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 25597  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  25596 tttaacaactcatagataacatcatgtattcatcatcactaataacttaaacaacacaatataatcat 25529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 37661 - 37568
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatca 184  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||| |||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  37661 acatcatcaattcataataataattattcatcaaacattccattagcaatacatgaataaaagacaacgtatcaacttaacataaccatcatca 37568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 23427776 - 23427943
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  23427776 acatcatcaatttataataataattattcatcaaacatttcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcattaagtaca 23427875  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  23427876 tttaacaactcatagataacatcatgtaatcatcatcactaataacttagacaacacaatataatcat 23427943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 106 - 258
Target Start/End: Complemental strand, 44385947 - 44385795
Alignment:
Q  106 aataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatag 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  44385947 aataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaagttaacataatcatcatcaagtacatttaacaactcatag 44385848  T
Q  206 ataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  44385847 ataacatcatgtaatcatcatcactaacaacttaaacaacacaatataatcat 44385795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 21974312 - 21974143
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  21974312 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 21974213  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  21974212 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 21974143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 126 - 258
Target Start/End: Original strand, 23913250 - 23913382
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23913250 catctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaacttatagataacatcatgtaatcatca 23913349  T
Q  226 tcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||| ||||||||||||||||||||||    
T  23913350 tcactaataacttaaacaacacaatataatcat 23913382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 21409850 - 21410019
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaac-ttaacacaaccatcatcaagtac 189  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||    
T  21409850 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaactttaacataaccatcatcaagtac 21409949  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
    | ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  21409950 acttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21410019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 21804342 - 21804511
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaac-ttaacacaaccatcatcaagtac 189  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||    
T  21804342 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaactttaacataaccatcatcaagtac 21804441  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
    | ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  21804442 acttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 21978422 - 21978253
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| || ||||||||||||||    
T  21978422 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatataacataaacatcatcaagtaca 21978323  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  21978322 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 21978253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 43250152 - 43250321
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  43250152 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 43250251  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| ||||||||||||||||||| |||||| ||  ||||||||||||||||||||    
T  43250252 cttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataatcat 43250321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 14399221 - 14399053
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  14399221 acatcattaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 14399122  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  14399121 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 27942814 - 27942675
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| || |||||||||||||||||    
T  27942814 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttattaacttatcataaccatcatcaagtaca 27942715  T
Q  191 tttaacaactcatag-ataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  27942714 tttaacaactcatagcttaacatcatgtaatcatcatcac 27942675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 11774246 - 11774375
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  11774246 acatcatcatttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagtaca 11774345  T
Q  191 tttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||||| | |||| |||||||||    
T  11774346 tttaacaactcatgggtaacctcatgtaat 11774375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 21386159 - 21386276
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  21386159 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaa 21386258  T
Q  241 acaacacaatataatcat 258  Q
    || |||||||||||||||    
T  21386259 actacacaatataatcat 21386276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 8415105 - 8414976
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| | |||| | ||||||||||    
T  8415105 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaaaataaccctaatcaagtaca 8415006  T
Q  191 tttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||||||| |||| |||||||||    
T  8415005 tttaacaactcataggtaacctcatgtaat 8414976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 21829589 - 21829465
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  21829589 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 21829490  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  21829489 cttaacaactcatagatatcatcat 21829465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 22110551 - 22110675
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||  |||||||||||||    
T  22110551 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaaaatcatcaagtaca 22110650  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  22110651 cttaacaactcatagatatcatcat 22110675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 18864219 - 18864109
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||    
T  18864219 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcata 18864120  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  18864119 gatatcatcat 18864109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 30941679 - 30941569
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||    
T  30941679 taataatacttattcatcaaacatctcattatcaatttatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcata 30941580  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  30941579 gatatcatcat 30941569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 363218 - 363327
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  363218 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcatcttaacataaccatcaacaagtaca 363317  T
Q  191 tttaacaact 200  Q
    ||||||||||    
T  363318 tttaacaact 363327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 21328527 - 21328644
Alignment:
Q  102 tcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactc 201  Q
    |||||| |||||||||||| ||| |||||||||| |||| |||||||||   ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21328527 tcataacaataattattcaacaagcatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagtacatttaacaactc 21328626  T
Q  202 atagataacatcatgtaa 219  Q
    ||||||||||||||||||    
T  21328627 atagataacatcatgtaa 21328644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 8729738 - 8729645
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatca 184  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  8729738 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 8729645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 42561005 - 42560882
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||| ||||||| |||||||||||||||| |||||||||| |||| |||||||||   ||||||| ||||||||||| ||||| ||||| ||||||||||    
T  42561005 atcaattcataacaataattattcatcaaccatctcattagcaatgcatgaataaggaacaacttgtcaacttaacataaccaccatcacgtacatttaa 42560906  T
Q  196 caactcatagataacatcatgtaa 219  Q
    ||||||||||||||||||||||||    
T  42560905 caactcatagataacatcatgtaa 42560882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 21968071 - 21967992
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  21968071 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacatcatgtaat 21967992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 21980911 - 21980832
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  21980911 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacatcatgtaat 21980832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 21985894 - 21985815
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  21985894 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacatcatgtaat 21985815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 22000857 - 22000778
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  22000857 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacatcatgtaat 22000778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 22009275 - 22009196
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||| || ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  22009275 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagtacatttaacaactcataggtaacatcatgtaat 22009196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 44494280 - 44494223
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  44494280 caacttaacataaccatcatcaagtacatttaacaattcataggtaacatcatgtaat 44494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 34950124 - 34950165
Alignment:
Q  179 tcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  34950124 tcatcaagtacatttaacaactcataggtaacatcatgtaat 34950165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 11252138 - 11252087
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcat 215  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  11252138 caacttaacataacc-tcatcaagtacatttaacaactcataggtaacatcat 11252087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 1483965 - 1484014
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  1483965 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 1484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 4482875 - 4482924
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  4482875 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 4482924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 4542971 - 4542922
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  4542971 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 4542922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 5853890 - 5853841
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  5853890 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 5853841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 14823338 - 14823387
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  14823338 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 14823387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 18678623 - 18678574
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  18678623 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 18678574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 18717812 - 18717763
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  18717812 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 18717763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 20402790 - 20402839
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  20402790 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 20402839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 22001324 - 22001373
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  22001324 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 22001373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 44475750 - 44475787
Alignment:
Q  192 ttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||  |||||||||||||    
T  44475750 ttaacaactcatagataacatcacataatcatcatcac 44475787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 44479012 - 44479049
Alignment:
Q  192 ttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||  |||||||||||||    
T  44479012 ttaacaactcatagataacatcacataatcatcatcac 44479049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 18773 - 18940
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  18773 acatcatcaatttataataacaattattcatcaaacatctcattatcaattcatgaataaatgacaacttatcaacttaacataaccatcatcaagtaca 18872  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||| |||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||    
T  18873 tttaacaacttatagataacatcacataatcatcatcactaataactgaaacaacacaatataatcat 18940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 258
Target Start/End: Complemental strand, 7054 - 6922
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7054 catctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 6955  T
Q  226 tcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||| ||||||||||||||||||||||    
T  6954 tcactaataacttaaacaacacaatataatcat 6922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 33887 - 34025
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  33887 acatcatcaattcataataataattattcatcaaacatctcattagcaattcatgaataaaagacaacttatcaacttaacataacgatcatcaagtaca 33986  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33987 tttaacaactcatagataacatcatgtaatcatcatcac 34025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 28466 - 28560
Alignment:
Q  135 atcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28466 atcaattcatgaataaaagacaacttatcaacttaacataacgatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 28560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 8242362 - 8242531
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  8242362 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 8242461  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  8242462 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 8242531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 11565351 - 11565520
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  11565351 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 11565450  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  11565451 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 11565520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 12620462 - 12620293
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  12620462 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 12620363  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12620362 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 12620293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 23400627 - 23400793
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaactt-aacacaaccatcatcaagtac 189  Q
    ||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||    
T  23400627 acatcattactttataataataattattcatcaaacatctcattatcaattcatgaataaaggacaacttatcaactttaacataaccatcatcaagtac 23400726  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||||||||||    
T  23400727 atttaacaactcatagataacatcatgtaatcatcatcactaataacttaaac--tacaatataatcat 23400793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 254
Target Start/End: Complemental strand, 11717069 - 11716904
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  11717069 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 11716970  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataa 254  Q
     ||||||||||||||||| ||||||||||||||||||| |||||| ||  ||||||||||||||||    
T  11716969 cttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataa 11716904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 22861705 - 22861874
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||| ||||||||    
T  22861705 acatcattaattcataatcataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcaccaagtaca 22861804  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  22861805 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 22861874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 23988253 - 23988422
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| | || ||||||||||||||    
T  23988253 acatcattaattcataataataattattcatcaaacatttcattatcaattcattaataaaagacaacttatcaatttaatataaacatcatcaagtaca 23988352  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  23988353 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 23988422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 27555490 - 27555657
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  27555490 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaac-tatcaacttaacataaacatcatcaagtaca 27555588  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||| |||| ||||||    
T  27555589 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaactcaatgtaatca 27555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 126 - 258
Target Start/End: Original strand, 2076271 - 2076403
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 225  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2076271 catctcattatcaattcatgaataaaaaacaacttatcaacttaacataatcatcatcaaatacatttaacaactcatagataacatcatgtaatcatca 2076370  T
Q  226 tcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||| ||||||||||||||||||||||    
T  2076371 tcactaataacttaaacaacacaatataatcat 2076403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 22075519 - 22075347
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  22075519 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 22075420  T
Q  191 tttaacaactcatag----ataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||    ||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  22075419 cttaacaactcatagatatatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 22075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 14470831 - 14470998
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  14470831 acatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacctaacataaacatcatcaagtaca 14470930  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
      |||||||||||| ||| | |||| ||||| ||||||||||||| |||||| |||||||||||||||    
T  14470931 cctaacaactcataaatatcttcatataatcttcatcactaataacttaaactacacaatataatcat 14470998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 91 - 227
Target Start/End: Complemental strand, 31479591 - 31479455
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||| ||||    
T  31479591 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaaataca 31479492  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatc 227  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31479491 tttaacaactcatagataatatcatgtaatcatcatc 31479455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 12941171 - 12941309
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12941171 acatcatcatttcataataataattattcatcaaacattccatcagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 12941270  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||   |||||||||||||    
T  12941271 tttaacaactcatagataacatctcataatcatcatcac 12941309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 23537931 - 23538069
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||  |||||||||||||||||||| |||||||||||||||||    
T  23537931 acatcatcaattcataataataattattcatcaaacatctcattaacaattcacgaataagggacaacttatcaacttaacataaccatcatcaagtaca 23538030  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  23538031 tttaacaactcatagacaacatcatgtaatcattatcac 23538069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 27222782 - 27222920
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27222782 acatcatcatttcataataatagttattcatcgaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 27222881  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  27222882 tttaacaactcatagataacatcacataatcatcatcac 27222920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 4475745 - 4475868
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  4475745 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagtaca 4475844  T
Q  191 tttaacaactcatagataacatca 214  Q
    |||||||||||||| |||||||||    
T  4475845 tttaacaactcataaataacatca 4475868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 28291023 - 28290885
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||   |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  28291023 acatcatcatttcataataataattattcatcaaacattcaattagcaatttatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 28290924  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||| ||||||||||||   |||||||||||||    
T  28290923 tttaacaacttatagataacatctcataatcatcatcac 28290885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 23955319 - 23955448
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  23955319 acatcatcatttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagtaca 23955418  T
Q  191 tttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||||| | |||| |||||||||    
T  23955419 tttaacaactcatgggtaacctcatgtaat 23955448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 18918659 - 18918542
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  18918659 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaa 18918560  T
Q  241 acaacacaatataatcat 258  Q
    || | |||||||||||||    
T  18918559 actatacaatataatcat 18918542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 91 - 207
Target Start/End: Complemental strand, 27416656 - 27416540
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  27416656 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacctatcaacttaacataaacatcatcaagtaca 27416557  T
Q  191 tttaacaactcatagat 207  Q
     ||||||||||||||||    
T  27416556 cttaacaactcatagat 27416540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 22947617 - 22947741
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| || ||||||||||||||    
T  22947617 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagtaca 22947716  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  22947717 cttaacaactcatagatatcatcat 22947741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 22951573 - 22951697
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| || ||||||||||||||    
T  22951573 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagtaca 22951672  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  22951673 cttaacaactcatagatatcatcat 22951697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 23870061 - 23870185
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| || ||||||||||||||    
T  23870061 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagtaca 23870160  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  23870161 cttaacaactcatagatatcatcat 23870185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 23874017 - 23874141
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| || ||||||||||||||    
T  23874017 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagtaca 23874116  T
Q  191 tttaacaactcatagataacatcat 215  Q
     ||||||||||||||||| ||||||    
T  23874117 cttaacaactcatagatatcatcat 23874141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 16622797 - 16622921
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaact 200  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||| || |||||||||||||||||||||| |    
T  16622797 ttcataatgataatcattcatcaaacatctcattatcatttcatgaataaaaga--acttatcaacttaacataaacatcatcaagtacatttaacaatt 16622894  T
Q  201 catagataacatcatgtaatcatcatc 227  Q
    ||||||||| |||||||||||||||||    
T  16622895 catagataatatcatgtaatcatcatc 16622921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 23393605 - 23393715
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||    
T  23393605 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcata 23393704  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  23393705 gatatcatcat 23393715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 23413513 - 23413623
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||    
T  23413513 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcata 23413612  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  23413613 gatatcatcat 23413623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 16758665 - 16758823
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  16758665 acatcattaattcataataataattattcatcaaacatctcactatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 16758764  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     |||| ||||||||||||           |||||||||||||||||||  ||||||||||||||||||||    
T  16758765 cttaataactcatagata-----------tcatcatcactaataaatttaaaacaacacaatataatcat 16758823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 34297896 - 34297773
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||| ||||||| |||||||||||||||| |||||||||| |||| |||||||||   ||||||||||||||||||| |||||||| |||||||||||||    
T  34297896 atcaattcataacaataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcagcaagtacatttaa 34297797  T
Q  196 caactcatagataacatcatgtaa 219  Q
    ||||||||||||||||||||||||    
T  34297796 caactcatagataacatcatgtaa 34297773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 19869160 - 19869261
Alignment:
Q  114 ttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatc 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||||||| ||||    
T  19869160 ttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcatagatatcatc 19869259  T
Q  214 at 215  Q
    ||    
T  19869260 at 19869261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 18953562 - 18953447
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| ||||||||||||| |||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  18953562 tcatgaatagaagacaacttatcgacttaacataatcatcatcaagtacatttaacaactcctagatgacatcatgtaatcatcatcactaataacttaa 18953463  T
Q  241 acaacacaatataatcat 258  Q
    ||   |||||||||||||    
T  18953462 ac--tacaatataatcat 18953447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 1254114 - 1254223
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||| ||||||| |||||||||||||||| |||||||||| |||| |||||||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  1254114 atcaattcataacaataattattcatcaaccatctcattaacaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagtacatttaa 1254213  T
Q  196 caactcatag 205  Q
    ||||||||||    
T  1254214 caactcatag 1254223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 219
Target Start/End: Original strand, 25737842 - 25737970
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||| |||| ||||||| | |||||||||| ||| |||||||||| |||| |||||||||  ||||||||||||||||| || || ||||||||||||||    
T  25737842 acattatcaattcataacagtaattattcagcaagcatctcattagcaatacatgaataagggacaacttatcaacttagcataatcatcatcaagtaca 25737941  T
Q  191 tttaacaactcatagataacatcatgtaa 219  Q
    |||| ||||||||||||||||||||||||    
T  25737942 tttaccaactcatagataacatcatgtaa 25737970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 1643318 - 1643369
Alignment:
Q  207 taacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  1643318 taacatcatgtaatcatcatcactaataacttaaactacacaatataatcat 1643369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 28707880 - 28707938
Alignment:
Q  162 tcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||    
T  28707880 tcaacttaacataaccctcatcaagtacatttaacaactcataggtaacctcatgtaat 28707938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 2291779 - 2291730
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  2291779 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 2291730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 8054592 - 8054641
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  8054592 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 8054641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 9622969 - 9622913
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||| ||| |||| |||||||||||||| |||||||||||| ||||||||||||||    
T  9622969 caactttacataaccctcatcaagtacatt-aacaactcataggtaacatcatgtaat 9622913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 18335191 - 18335142
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  18335191 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 18335142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 19004609 - 19004658
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  19004609 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 19004658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 23537882 - 23537923
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  23537882 catctcattagcaattcatgaataaaagacaacttagcaact 23537923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 24422110 - 24422159
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  24422110 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 24422159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 26925238 - 26925189
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  26925238 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 26925189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 33861358 - 33861407
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  33861358 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 33861407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 33863841 - 33863890
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  33863841 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 33863890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 14594718 - 14594666
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcat 215  Q
    |||||||||| |||| || || ||||||||||||||||||||| |||||||||    
T  14594718 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 14594666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 1541487 - 1541452
Alignment:
Q  191 tttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||||||||| |||||||||||||||||||    
T  1541487 tttaacaactcatagacaacatcatgtaatcatcat 1541452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 12741889 - 12741938
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| || ||||||||||||||||    
T  12741889 catcatcaatcatatttaacaactcatagacaatatcatgtaatcatcat 12741938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 22781835 - 22781884
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||| ||||||||||    
T  22781835 catcatcaatcatatttaacaactcatagacaacatcatataatcatcat 22781884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 24630176 - 24630007
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  24630176 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 24630077  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  24630076 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 24630007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 30346786 - 30346617
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  30346786 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 30346687  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  30346686 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 30346617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 10103425 - 10103256
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  10103425 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 10103326  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| || ||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  10103325 cttaacaactcatagatatcaacatgtaatcatcatcactaataactttaaaacaacacaatataatcat 10103256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 12902735 - 12902566
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  12902735 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 12902636  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| ||| |||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12902635 cttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatataatcat 12902566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 24645101 - 24645270
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  24645101 acatcattaattcataataataattattcatcaaacatctcattaccaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 24645200  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  24645201 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 24645270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 24647877 - 24648046
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  24647877 acatcattaattcataataataattattcatcaaacatctcattaccaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 24647976  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  24647977 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 24648046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 27600321 - 27600490
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  27600321 acatcattaattcataacaataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 27600420  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  27600421 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 27600490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 126 - 255
Target Start/End: Original strand, 9783979 - 9784108
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9783979 catctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacattaaacaactcatagataacatcatgtaatcatca 9784078  T
Q  226 tcactaataaattaaacaacacaatataat 255  Q
    |||||||||| |||||||||||||||||||    
T  9784079 tcactaataacttaaacaacacaatataat 9784108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 101 - 258
Target Start/End: Complemental strand, 27381112 - 27380953
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaact 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||| |||||||||    
T  27381112 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaact 27381013  T
Q  201 catagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
    |||||||| |||||||||||||||||||||||||| ||  ||||||||| ||||||||||    
T  27381012 catagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcat 27380953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 101 - 258
Target Start/End: Complemental strand, 27385082 - 27384923
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaact 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||| |||||||||    
T  27385082 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaact 27384983  T
Q  201 catagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
    |||||||| |||||||||||||||||||||||||| ||  ||||||||| ||||||||||    
T  27384982 catagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcat 27384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 19663686 - 19663548
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19663686 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 19663587  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  19663586 tttaacaactcatagataacatcacataatcatcatcac 19663548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 20260207 - 20260345
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20260207 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 20260306  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  20260307 tttaacaactcatagataacatcacataatcatcatcac 20260345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 21074636 - 21074498
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21074636 acatcatcatttcataataataattattcatcaaacatttttttagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 21074537  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  21074536 tttaacaactcatagataacatcatgttgtcatcatcac 21074498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 9240624 - 9240759
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  9240624 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaatagaagacaacttatcaacttaacataaccatcatcaagtaca 9240723  T
Q  191 tttaacaactcatagataacatcatgtaatcatcat 226  Q
    ||||||||||||||||||||||||  ||||||||||    
T  9240724 tttaacaactcatagataacatcacataatcatcat 9240759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 6481734 - 6481872
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||||||||||||||||| |  ||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  6481734 acatcatcatttcataataataattattcatcaaacgttccattagcaattcatgaataaaagacaacctatcaacttaacataaccatcatcaagtaca 6481833  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  6481834 tttaacaactcatagataacatcacataatcatcatcac 6481872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 6485201 - 6485339
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    |||||||||||||||||||||||||||||||||||| |  ||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  6485201 acatcatcatttcataataataattattcatcaaacgttccattagcaattcatgaataaaagacaacctatcaacttaacataaccatcatcaagtaca 6485300  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  6485301 tttaacaactcatagataacatcacataatcatcatcac 6485339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 31343867 - 31344035
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||    
T  31343867 acatcattaattcataataataattattcatcaaacatctctttatcaattcatgaataaaagacagcttatcaacttaacatatacatcatcaagtaca 31343966  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
      |||||||||||||||| | |||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  31343967 cctaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 31344035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 37378986 - 37379115
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  37378986 acatcatcatttcataataataatttttcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagtaca 37379085  T
Q  191 tttaacaactcatagataacatcatgtaat 220  Q
    ||||||||||||||| |||| |||||||||    
T  37379086 tttaacaactcataggtaacctcatgtaat 37379115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 10686375 - 10686272
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10686375 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 10686276  T
Q  191 ttta 194  Q
    ||||    
T  10686275 ttta 10686272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 24647044 - 24647166
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  24647044 acatcattaattcataataataattattcatcaaacatctcattaccaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 24647143  T
Q  191 tttaacaactcatagataacatc 213  Q
     ||||||||||||||||| ||||    
T  24647144 cttaacaactcatagatatcatc 24647166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 41532557 - 41532447
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||    
T  41532557 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcata 41532458  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  41532457 gatatcatcat 41532447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 570968 - 571017
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  570968 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 571017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 6262245 - 6262204
Alignment:
Q  188 acatttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  6262245 acatttaacaactcatagataacatcacataatcatcatcac 6262204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 18808506 - 18808555
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  18808506 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 18808555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 19663523 - 19663482
Alignment:
Q  188 acatttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  19663523 acatttaacaactcatagataacatcacataatcatcatcac 19663482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 23130441 - 23130490
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  23130441 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 23130490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 23132908 - 23132957
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  23132908 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 23132957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 23135155 - 23135204
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  23135155 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 23135204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 23710131 - 23710082
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  23710131 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 23710082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 24898802 - 24898753
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  24898802 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 24898753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 24901277 - 24901228
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  24901277 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 24901228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 24903754 - 24903705
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  24903754 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 24903705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 24906231 - 24906182
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  24906231 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 24906182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 24908706 - 24908657
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  24908706 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 24908657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 26504943 - 26504992
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  26504943 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 26504992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 26507421 - 26507470
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  26507421 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 26507470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 32040089 - 32040040
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  32040089 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 32040040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 34403098 - 34403049
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  34403098 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 34403049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 39681877 - 39681926
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  39681877 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 39681926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 6262307 - 6262270
Alignment:
Q  192 ttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||  |||||||||||||    
T  6262307 ttaacaactcatagataacatcacataatcatcatcac 6262270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 949 - 781
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  949 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 850  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||| ||||||| |||||||||||||||||| ||  |||||||||||| ||||||    
T  849 cttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 121; Significance: 4e-62; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 60454 - 60284
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  60454 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 60355  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt---aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||   ||||||||||||||||||||    
T  60354 cttaacaactcatagatatcatcatgtaatcatcatcactaataacttttaaaacaacacaatataatcat 60284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 133775 - 133824
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  133775 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 133824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 136244 - 136293
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  136244 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 136293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 138713 - 138762
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  138713 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 141182 - 141231
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  141182 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 141231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 143651 - 143700
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  143651 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 143700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 101 - 257
Target Start/End: Original strand, 14804 - 14962
Alignment:
Q  101 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaact 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  14804 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagtacacttaacaact 14903  T
Q  201 catagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
    |||||||| | |||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  14904 catagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 68684 - 68515
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || || |||||||||||    
T  68684 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacaccatcaagtaca 68585  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  68584 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 68515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 11001 - 11169
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  11001 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 11100  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||| ||||||||    
T  11101 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaa-ataatcat 11169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 250
Target Start/End: Complemental strand, 11188 - 11027
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  11188 acatcattaattcataatattaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaggtaca 11089  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaat 250  Q
     ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  11088 cttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 11027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 109551 - 109689
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  109551 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 109650  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  109651 tttaacaactcatagataacatcacataatcatcatcac 109689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 224271 - 224133
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  224271 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 224172  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  224171 tttaacaactcatagataacatcacataatcatcatcac 224133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 11727 - 11895
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| || ||||||||||||||    
T  11727 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgtataaaagacaacatatcaacttaacataagcatcatcaagtaca 11826  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 257  Q
     ||||||||||||||||  |||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  11827 cttaacaactcatagatttcatcatgtaatcatcatcactaataattttaaaacaacacaatgtaatca 11895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 93974 - 94023
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  93974 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 94023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 126 - 258
Target Start/End: Complemental strand, 74425 - 74293
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 225  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  74425 catctcattagcaactcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatct 74326  T
Q  226 tcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||||||||||||||| ||||||||||    
T  74325 tcactaataaattaaacaacaccatataatcat 74293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 150 - 288
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  150 acatcatcattacataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtaca 249  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  250 tttaacaactcatagataacatcacataatcatcatcac 288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 10945 - 10812
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10945 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaa 10846  T
Q  196 caactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||  |||||||||||||    
T  10845 caactcatagataacatcacataatcatcatcac 10812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 3645 - 3507
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  3645 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagtaca 3546  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||| |||||||||  |||||||||||||    
T  3545 tttaacaactcataaataacatcacataatcatcatcac 3507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 61 - 1
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaa 151  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  61 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 6448 - 6280
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  6448 acatcattaattcataataatagttattcatcaa-catctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 6350  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| |||||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  6349 cttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcat 6280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 34256 - 34090
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  34256 acatcattaattcataataataattattcatcaaacatctcatcatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagtaca 34157  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 258  Q
     ||||||||||||||||| ||||||||||||   ||||||||||| ||  ||||||||||||||||||||    
T  34156 cttaacaactcatagatatcatcatgtaatc---atcactaataactttaaaacaacacaatataatcat 34090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 5659 - 5492
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  5659 acatcattaattcataataacaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagtaca 5560  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcactaataaattaaacaacacaatataatcat 258  Q
      ||| |||||||| ||| | |||| ||||||||||||||||||| ||  || |||||||||||||||    
T  5559 cctaagaactcataaatatcttcatataatcatcatcactaataacttggactacacaatataatcat 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 8540 - 8671
Alignment:
Q  104 ataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcat 203  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||    
T  8540 ataataataatcattcatcaaacatctcattatcatttcatgaataaaagacaacttattaacttaacataaacatcatcaagtacacttaacaactcat 8639  T
Q  204 agataacatcatgtaatcatcatcactaataa 235  Q
    ||||| ||||||||||||||||||||||||||    
T  8640 agatatcatcatgtaatcatcatcactaataa 8671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 5192 - 5330
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| ||||| ||||||||||||||||||||||  ||||| || ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  5192 acatcatcaattcatcataataattattcatcaaacattccattagcatttcatgaataatagacaacttatcaacttaacataaccatcatcaagtaca 5291  T
Q  191 tttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  5292 tttaacaactcatagataacatcacataatcatcatcac 5330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 37290 - 37163
Alignment:
Q  132 attatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac-t 230  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  37290 attatcatttcatgaataaaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatctcat 37191  T
Q  231 aataaattaaacaacacaatataatcat 258  Q
    ||||| ||| || |||||||||||||||    
T  37190 aataacttagaccacacaatataatcat 37163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 3974 - 4091
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||    
T  3974 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcataatcactaataacttaa 4073  T
Q  241 acaacacaatataatcat 258  Q
    || |||||||||||||||    
T  4074 actacacaatataatcat 4091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 1 - 39
Alignment:
Q  220 tcatcatcactaataaattaaacaacacaatataatcat 258  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  1 tcatcatcactaataacttaaactacacaatataatcat 39  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 91 - 207
Target Start/End: Original strand, 70705 - 70821
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtaca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  70705 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacctatcaacttaacataaacatcatcaagtaca 70804  T
Q  191 tttaacaactcatagat 207  Q
     ||||||||||||||||    
T  70805 cttaacaactcatagat 70821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 5775 - 5917
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctca-ttatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtac 189  Q
    ||||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  5775 acatcatcaattcataataatacttattcatcaaacgtctcaattatcaattcatgaataaaagacaact-atcaacttaacataaacatcatcaagtac 5873  T
Q  190 atttaacaactcatagataacatcatgtaatcatcatcactaataa 235  Q
    | ||||||||||||  ||| ||||||||||||||||||||||||||    
T  5874 acttaacaactcat--atatcatcatgtaatcatcatcactaataa 5917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 4076 - 4199
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||| ||||||| |||||||||||||||| |||||||||| |||| |||||||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  4076 atcaattcataacaataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagtacatttaa 4175  T
Q  196 caactcatagataacatcatgtaa 219  Q
    ||||||||||||||||||||||||    
T  4176 caactcatagataacatcatgtaa 4199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 15689 - 15579
Alignment:
Q  105 taataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcata 204  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||    
T  15689 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagtacacttaacaactcata 15590  T
Q  205 gataacatcat 215  Q
    |||| ||||||    
T  15589 gatatcatcat 15579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 62918 - 62803
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  62918 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaa 62819  T
Q  241 acaacacaatataatcat 258  Q
    ||   |||||||||||||    
T  62818 ac--tacaatataatcat 62803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 126 - 258
Target Start/End: Complemental strand, 21425 - 21300
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 225  Q
    |||||||||| |||||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21425 catctcattagcaattcatgaataaaagacaactta--------acataaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatca 21334  T
Q  226 tcactaataa-attaaacaacacaatataatcat 258  Q
    ||||||||||  ||||||||||||||||||||||    
T  21333 tcactaataactttaaacaacacaatataatcat 21300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 37276 - 37161
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaattaa 240  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  37276 tcatgaatagaagacaacttatcgacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataacttaa 37177  T
Q  241 acaacacaatataatcat 258  Q
    ||   |||||||||||||    
T  37176 ac--tacaatataatcat 37161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 24016 - 23937
Alignment:
Q  141 tcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  24016 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagtacatttaacaactcctagataacatcatgtaat 23937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 22358 - 22317
Alignment:
Q  217 taatcatcatcactaataaattaaacaacacaatataatcat 258  Q
    ||||||||||||||||||| | |||| |||||||||||||||    
T  22358 taatcatcatcactaataactcaaactacacaatataatcat 22317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 10752 - 10841
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaacaactcatagataacatcat 215  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||    
T  10752 catctcattatctattcatgaataaaatacaacttatcaacttaacataaccatcatcaagtacacttaacaactcttagatatcatcat 10841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 115473 - 115393
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaaca 172  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  115473 acatcatcaattcataaaaatacttattcatcaaacatctcattatcaattcatgaataaaagacaac-tatcaacttaaca 115393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 641 - 700
Alignment:
Q  91 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataa 150  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  641 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatggataa 700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 691 - 750
Alignment:
Q  200 tcatagataacatcatgtaatcatca-tcactaataaattaaacaacacaatataatcat 258  Q
    |||| |||||||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  691 tcatggataacatcatgtaatcaccaatcactaataacttaaacaacacaatataatcat 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 592 - 633
Alignment:
Q  126 catctcattatcaattcatgaataaaagacaacttatcaact 167  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  592 catctcattatcgattcatgaataaaagacaacttatcaact 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 163691 - 163588
Alignment:
Q  96 atcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacacaaccatcatcaagtacatttaa 195  Q
    |||| ||||||| |||||||||||| ||| |||||||||| |||  |||||||||   |||| |||||||||||||| |||| |||||||||||||||||    
T  163691 atcaattcataacaataattattcagcaagcatctcattaccaaaacatgaataaggaacaagttatcaacttaacataaccctcatcaagtacatttaa 163592  T
Q  196 caac 199  Q
    ||||    
T  163591 caac 163588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 153840 - 153803
Alignment:
Q  192 ttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||| |||||||||||||||||||||    
T  153840 ttaacaactcatagatgacatcatgtaatcatcatcac 153803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 35 - 89
Alignment:
Q  166 cttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    ||||||| |||| |||||||||||||||||||||||| || |||| |||||||||    
T  35 cttaacataaccctcatcaagtacatttaacaactcaaaggtaacctcatgtaat 89  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 3311 - 3265
Alignment:
Q  174 aaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||||    
T  3311 aaccctcatcaagtacatttaacaactcataggtaacctcatgtaat 3265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 12955 - 13004
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  12955 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 13004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 20310 - 20359
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  20310 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 20359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 13518 - 13567
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  13518 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 13567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 19084 - 19125
Alignment:
Q  188 acatttaacaactcatagataacatcatgtaatcatcatcac 229  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  19084 acatttaacaactcatagataacatcacataatcatcatcac 19125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 9312 - 9361
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  9312 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 9361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 37385 - 37434
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  37385 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 37434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 39964 - 40013
Alignment:
Q  177 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 226  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  39964 catcatcaatcatatttaacaactcatagacaacatcatgtaatcatcat 40013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 173278 - 173225
Alignment:
Q  167 ttaacacaaccatcatcaagtacatttaacaactcatagataacatcatgtaat 220  Q
    |||||| |||| |||||||||||||||||||||| |||| ||||||||| ||||    
T  173278 ttaacataaccctcatcaagtacatttaacaactaataggtaacatcatataat 173225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 496 - 444
Alignment:
Q  163 caacttaacacaaccatcatcaagtacatttaacaactcatagataacatcat 215  Q
    |||||||||| |||| || || ||||||||||||||||||||| |||||||||    
T  496 caacttaacataaccctcctcgagtacatttaacaactcataggtaacatcat 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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