View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0740_high_1 (Length: 1021)

Name: NF0740_high_1
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0740_high_1
NF0740_high_1
[»] chr8 (37 HSPs)
chr8 (7-992)||(45547723-45548718)
chr8 (601-824)||(45540318-45540534)
chr8 (601-681)||(45540695-45540776)
chr8 (478-625)||(32924167-32924313)
chr8 (504-650)||(32975698-32975845)
chr8 (726-823)||(24504057-24504154)
chr8 (726-806)||(13089766-13089850)
chr8 (504-650)||(34286492-34286638)
chr8 (726-822)||(8444263-8444356)
chr8 (515-650)||(38895681-38895817)
chr8 (504-650)||(24350447-24350594)
chr8 (726-813)||(24581449-24581536)
chr8 (480-653)||(14942411-14942585)
chr8 (547-644)||(25465781-25465878)
chr8 (478-650)||(32131425-32131598)
chr8 (504-650)||(41145324-41145473)
chr8 (726-813)||(10230104-10230191)
chr8 (515-626)||(14724918-14725029)
chr8 (481-650)||(16972284-16972455)
chr8 (570-625)||(25333655-25333710)
chr8 (504-647)||(28879069-28879210)
chr8 (537-653)||(2563402-2563519)
chr8 (578-642)||(24087256-24087321)
chr8 (726-790)||(4034301-4034365)
chr8 (527-650)||(10298855-10298978)
chr8 (478-557)||(26046978-26047057)
chr8 (547-653)||(30974043-30974150)
chr8 (504-653)||(2669659-2669809)
chr8 (570-647)||(9131059-9131137)
chr8 (593-650)||(10213795-10213853)
chr8 (478-524)||(11988308-11988354)
chr8 (726-799)||(25582581-25582654)
chr8 (479-524)||(29713289-29713334)
chr8 (570-650)||(35055499-35055579)
chr8 (537-626)||(36907597-36907686)
chr8 (570-650)||(37410841-37410922)
chr8 (570-650)||(42102183-42102264)
[»] chr2 (32 HSPs)
chr2 (478-653)||(21788442-21788618)
chr2 (726-824)||(2702258-2702356)
chr2 (726-823)||(12410790-12410887)
chr2 (726-823)||(12422850-12422947)
chr2 (726-808)||(27271658-27271740)
chr2 (726-823)||(6764423-6764520)
chr2 (726-823)||(37647968-37648065)
chr2 (726-815)||(11031809-11031898)
chr2 (733-813)||(34394492-34394572)
chr2 (546-647)||(8832510-8832612)
chr2 (495-650)||(4004821-4004977)
chr2 (478-647)||(4026911-4027080)
chr2 (473-567)||(34913402-34913496)
chr2 (482-650)||(15155802-15155971)
chr2 (478-650)||(33321240-33321413)
chr2 (525-626)||(42064883-42064984)
chr2 (516-650)||(36501443-36501578)
chr2 (570-647)||(38216096-38216174)
chr2 (506-653)||(11776997-11777145)
chr2 (504-650)||(25836641-25836787)
chr2 (726-803)||(7900954-7901031)
chr2 (481-626)||(29774733-29774878)
chr2 (478-650)||(37409628-37409801)
chr2 (473-521)||(21788572-21788620)
chr2 (560-628)||(35731203-35731271)
chr2 (480-651)||(38471718-38471890)
chr2 (478-557)||(755764-755843)
chr2 (548-650)||(30382197-30382300)
chr2 (560-626)||(7480852-7480918)
chr2 (560-653)||(12950040-12950134)
chr2 (577-650)||(22898285-22898359)
chr2 (569-626)||(23956217-23956274)
[»] chr7 (34 HSPs)
chr7 (473-653)||(44613398-44613579)
chr7 (726-823)||(28782015-28782112)
chr7 (726-824)||(1032222-1032320)
chr7 (726-823)||(9948933-9949030)
chr7 (726-810)||(11621380-11621464)
chr7 (726-823)||(9942602-9942699)
chr7 (726-806)||(40871302-40871382)
chr7 (478-622)||(48021605-48021748)
chr7 (525-650)||(39279461-39279588)
chr7 (473-626)||(28759790-28759946)
chr7 (478-650)||(29390479-29390651)
chr7 (480-650)||(22032749-22032920)
chr7 (504-650)||(29378656-29378803)
chr7 (533-653)||(47654339-47654460)
chr7 (515-653)||(37465811-37465951)
chr7 (504-626)||(47648549-47648670)
chr7 (478-650)||(38372543-38372716)
chr7 (514-626)||(14691252-14691364)
chr7 (480-647)||(22575573-22575741)
chr7 (593-647)||(33204934-33204989)
chr7 (728-806)||(12622906-12622984)
chr7 (570-650)||(16932858-16932939)
chr7 (570-650)||(16938241-16938322)
chr7 (570-650)||(16958892-16958973)
chr7 (570-650)||(33288003-33288084)
chr7 (733-813)||(17193893-17193972)
chr7 (733-803)||(15669718-15669787)
chr7 (488-650)||(34922926-34923091)
chr7 (504-653)||(35809101-35809251)
chr7 (517-626)||(8180544-8180653)
chr7 (726-803)||(18299447-18299523)
chr7 (726-803)||(29626953-29627029)
chr7 (489-651)||(43391717-43391880)
chr7 (593-653)||(43818803-43818864)
[»] chr4 (43 HSPs)
chr4 (473-653)||(41228883-41229064)
chr4 (726-823)||(43499300-43499397)
chr4 (726-824)||(39059723-39059821)
chr4 (729-806)||(37870649-37870726)
chr4 (727-822)||(36651742-36651837)
chr4 (473-647)||(46704201-46704375)
chr4 (726-824)||(9896508-9896606)
chr4 (514-650)||(18630823-18630960)
chr4 (478-645)||(29877624-29877792)
chr4 (478-650)||(23297423-23297593)
chr4 (504-650)||(48591352-48591499)
chr4 (729-823)||(7743575-7743669)
chr4 (506-626)||(36298344-36298465)
chr4 (478-625)||(18424232-18424378)
chr4 (729-823)||(42718574-42718669)
chr4 (473-567)||(212960-213053)
chr4 (726-815)||(23106753-23106842)
chr4 (504-650)||(2547975-2548122)
chr4 (516-650)||(17222852-17222987)
chr4 (504-626)||(896981-897103)
chr4 (481-647)||(42611799-42611966)
chr4 (478-587)||(7206578-7206687)
chr4 (473-649)||(8057017-8057194)
chr4 (504-647)||(36740915-36741059)
chr4 (478-625)||(38345776-38345922)
chr4 (504-626)||(7148783-7148905)
chr4 (481-650)||(12495572-12495744)
chr4 (473-650)||(11298573-11298740)
chr4 (726-798)||(48640764-48640836)
chr4 (733-813)||(54898895-54898975)
chr4 (504-599)||(43983362-43983457)
chr4 (570-628)||(48721897-48721955)
chr4 (481-557)||(948060-948136)
chr4 (478-557)||(3564205-3564284)
chr4 (577-647)||(8130563-8130634)
chr4 (478-557)||(43699505-43699584)
chr4 (473-524)||(46175902-46175953)
chr4 (577-650)||(14987528-14987602)
chr4 (591-647)||(30956782-30956839)
chr4 (550-650)||(31022457-31022558)
chr4 (547-647)||(35405738-35405838)
chr4 (578-650)||(42617158-42617231)
chr4 (570-650)||(47202902-47202983)
[»] chr1 (46 HSPs)
chr1 (473-653)||(9572709-9572891)
chr1 (726-815)||(19227887-19227976)
chr1 (726-823)||(33766359-33766456)
chr1 (726-823)||(51534478-51534575)
chr1 (726-814)||(4532087-4532175)
chr1 (473-653)||(46689475-46689656)
chr1 (726-806)||(34549383-34549463)
chr1 (726-806)||(45432374-45432454)
chr1 (478-626)||(46473079-46473227)
chr1 (478-650)||(13038932-13039105)
chr1 (733-809)||(33936450-33936526)
chr1 (504-650)||(26988159-26988306)
chr1 (504-650)||(28122627-28122776)
chr1 (481-626)||(4068103-4068248)
chr1 (726-823)||(13182647-13182744)
chr1 (504-653)||(36422906-36423056)
chr1 (505-649)||(15515276-15515421)
chr1 (526-650)||(37712100-37712225)
chr1 (487-626)||(35282547-35282686)
chr1 (504-650)||(37329340-37329487)
chr1 (480-626)||(51162256-51162402)
chr1 (480-628)||(12256594-12256741)
chr1 (478-625)||(26946058-26946206)
chr1 (504-647)||(48819310-48819454)
chr1 (481-647)||(10365159-10365325)
chr1 (504-650)||(16888897-16889040)
chr1 (480-587)||(49971238-49971345)
chr1 (504-626)||(6337709-6337831)
chr1 (577-645)||(10849999-10850068)
chr1 (516-626)||(12828145-12828257)
chr1 (473-626)||(25485728-25485881)
chr1 (546-626)||(36259244-36259324)
chr1 (608-650)||(1565303-1565345)
chr1 (484-650)||(35897547-35897718)
chr1 (570-650)||(15791460-15791541)
chr1 (490-626)||(26542970-26543106)
chr1 (504-624)||(3069809-3069929)
chr1 (570-653)||(19395851-19395935)
chr1 (570-626)||(50919564-50919620)
chr1 (726-801)||(26676905-26676980)
chr1 (732-799)||(31911555-31911622)
chr1 (516-650)||(41196638-41196773)
chr1 (577-650)||(5347238-5347312)
chr1 (593-627)||(10082351-10082385)
chr1 (570-650)||(3115990-3116071)
chr1 (726-803)||(28756478-28756555)
[»] chr3 (30 HSPs)
chr3 (485-653)||(32901073-32901242)
chr3 (504-650)||(43971775-43971922)
chr3 (473-650)||(3876191-3876369)
chr3 (478-653)||(33946475-33946643)
chr3 (478-646)||(34707645-34707814)
chr3 (504-648)||(43079864-43080009)
chr3 (478-650)||(51409378-51409550)
chr3 (504-650)||(40240505-40240652)
chr3 (478-650)||(22809121-22809295)
chr3 (478-642)||(40581012-40581178)
chr3 (481-621)||(53217998-53218138)
chr3 (569-653)||(36266307-36266392)
chr3 (504-650)||(585031-585177)
chr3 (577-653)||(38524172-38524249)
chr3 (733-798)||(50642392-50642457)
chr3 (478-589)||(29270346-29270457)
chr3 (570-651)||(25341347-25341429)
chr3 (504-626)||(42956132-42956254)
chr3 (504-626)||(45331248-45331370)
chr3 (589-653)||(4974407-4974472)
chr3 (480-557)||(10448761-10448838)
chr3 (570-650)||(17752059-17752140)
chr3 (570-650)||(19053379-19053460)
chr3 (546-650)||(20174868-20174973)
chr3 (577-653)||(43376779-43376856)
chr3 (733-803)||(20406403-20406473)
chr3 (580-626)||(27769736-27769782)
chr3 (546-650)||(48597794-48597900)
chr3 (726-787)||(15030106-15030167)
chr3 (533-626)||(53787705-53787798)
[»] chr5 (36 HSPs)
chr5 (726-819)||(19021396-19021489)
chr5 (726-822)||(22639563-22639659)
chr5 (726-823)||(39143220-39143317)
chr5 (504-642)||(13625456-13625596)
chr5 (482-622)||(42852011-42852150)
chr5 (504-650)||(40152804-40152951)
chr5 (726-823)||(6537080-6537176)
chr5 (478-626)||(7364262-7364410)
chr5 (504-647)||(28625491-28625635)
chr5 (504-647)||(24030226-24030369)
chr5 (484-626)||(13060555-13060697)
chr5 (533-650)||(35536885-35537002)
chr5 (478-650)||(29922117-29922290)
chr5 (570-650)||(40697083-40697164)
chr5 (505-648)||(11912032-11912176)
chr5 (733-792)||(926759-926818)
chr5 (480-622)||(43318990-43319132)
chr5 (478-625)||(2878631-2878777)
chr5 (495-626)||(17657244-17657375)
chr5 (505-587)||(1868858-1868940)
chr5 (478-556)||(22201959-22202037)
chr5 (569-630)||(11163231-11163292)
chr5 (478-563)||(17128263-17128348)
chr5 (533-626)||(28357181-28357274)
chr5 (478-653)||(1371921-1372094)
chr5 (477-557)||(10537241-10537321)
chr5 (525-625)||(41419533-41419633)
chr5 (596-650)||(6125389-6125444)
chr5 (504-650)||(6144749-6144896)
chr5 (482-557)||(11991294-11991369)
chr5 (733-800)||(22580397-22580464)
chr5 (546-624)||(38498623-38498699)
chr5 (525-650)||(40452405-40452532)
chr5 (508-650)||(41059717-41059860)
chr5 (516-622)||(23087736-23087842)
chr5 (726-799)||(26368935-26369008)
[»] chr6 (28 HSPs)
chr6 (473-647)||(6758607-6758783)
chr6 (478-653)||(23239232-23239408)
chr6 (726-806)||(12912248-12912328)
chr6 (727-815)||(24393921-24394009)
chr6 (476-650)||(29623406-29623580)
chr6 (495-649)||(32675818-32675973)
chr6 (473-652)||(2040107-2040292)
chr6 (478-646)||(21891270-21891439)
chr6 (727-806)||(165531-165610)
chr6 (478-613)||(3829885-3830020)
chr6 (733-815)||(18972621-18972703)
chr6 (504-648)||(2034159-2034304)
chr6 (478-626)||(10873971-10874117)
chr6 (477-625)||(2255718-2255866)
chr6 (546-653)||(10184255-10184363)
chr6 (726-799)||(6029356-6029429)
chr6 (596-652)||(6752915-6752972)
chr6 (504-647)||(2027107-2027251)
chr6 (525-628)||(7576812-7576915)
chr6 (577-650)||(10755211-10755285)
chr6 (570-650)||(9764319-9764400)
chr6 (504-557)||(24625862-24625915)
chr6 (577-644)||(10730142-10730210)
chr6 (480-567)||(6632646-6632733)
chr6 (608-650)||(23239232-23239275)
chr6 (593-647)||(35071359-35071414)
chr6 (726-803)||(7734077-7734153)
chr6 (478-626)||(10687292-10687443)
[»] scaffold0300 (1 HSPs)
scaffold0300 (726-822)||(9581-9677)
[»] scaffold0041 (1 HSPs)
scaffold0041 (726-806)||(94900-94980)
[»] scaffold0037 (1 HSPs)
scaffold0037 (726-806)||(997-1077)
[»] scaffold1367 (1 HSPs)
scaffold1367 (473-647)||(1038-1213)
[»] scaffold0074 (1 HSPs)
scaffold0074 (726-811)||(23809-23894)
[»] scaffold0157 (1 HSPs)
scaffold0157 (481-650)||(24733-24905)
[»] scaffold0057 (1 HSPs)
scaffold0057 (478-650)||(24317-24489)


Alignment Details
Target: chr8 (Bit Score: 814; Significance: 0; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 814; E-Value: 0
Query Start/End: Original strand, 7 - 992
Target Start/End: Complemental strand, 45548718 - 45547723
Alignment:
Q  7 tcgaataatatgatgttataagggatacagaaaagcatatccttagtatacttctggatgagatcgccaaagaatattgcacattcaaggagcgctgatt 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548718 tcgaaaaatatgatgttataagggatacagaaaagcatatccttagtatacttctggatgagatcgccaaagaatattgcacattcaaggagcgctgatt 45548619  T
Q  107 gaatatgacaaccatactatggaagttttttatgt-atttgcaatacaattttgttggttgtaagtttgtaactggtgaggagttctgaacagcaagttt 205  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548618 gaatatgacaaccatactatgaaagttttttatgttatttgcaatacaattttgttggttgtaagtttgtaactggtgaggagttctgaacagcaagttt 45548519  T
Q  206 tcattagaaagaagagtttcctcctttattaagttactataaaactttaacatggagtaaaatcttttaaattgagtacatttcttataaaatgatttat 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548518 tcattagaaagaagagtttcctcctttattaagttactataaaactttaacatggagtaaaatcttttaaattgagtacatttcttataaaatgatttat 45548419  T
Q  306 cgacattactttctcatatttgagttatccaaagacaatttcaaatagacaaaactacgcccgcaggtggcgttacatgcacctcccagtcccagacttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45548418 cgacattactttctcatatttgagttatccaaagacaatttcaaatagacaaaactacgcccgcaggtggcgttacatgcatctcccagtcccagacttg 45548319  T
Q  406 aagtcggatctcaaagccatccatgaaagaaatagcgtgtaaataccagagaaagccttttggccgattggattgagcttatgcaaaataactaatgaaa 505  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548318 aagtcggatctcaaagccatccatgaaagaaatagcgtggaaataccggagaaagccttttggccgattggattgagcttatgcaaaataactaatgaaa 45548219  T
Q  506 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtta 605  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  45548218 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaaatacaacttaggaagataaaattttcattaataaaaacttatgagtta 45548119  T
Q  606 atataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaatttttttatttgtctacca 705  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45548118 atataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaatttttttatttttctacca 45548019  T
Q  706 aaagtagtttgnnnnnnnnnaagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtca 805  Q
    ||| ||||||          ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45548018 aaaatagttt--ttttttttaagaaactaaaatggattaaattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtca 45547921  T
Q  806 attacaagaatgccaaaacaggaataaaaaagaaagctacc------cgtaaatattcccaagcatggtaaagggatattatcggagatttagttgaaca 899  Q
    |||||||||||||||||||||||| ||||||||||||||||      |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45547920 attacaagaatgccaaaacaggaacaaaaaagaaagctaccctgttacgtaaatattcccaagcaaggtaaagggatattatcggagatttagttgaaca 45547821  T
Q  900 aaatataacatcagatttcccatggccaaaaccgg-----aacnnnnnnnnnnctaccctgttacgtaatatttcccaagcaacgcagatgattgata 992  Q
    ||||||||||||||||||||||||||||||||  |     ||           |||||||||||||||||||||||||||||||||||||||||||||    
T  45547820 aaatataacatcagatttcccatggccaaaacatgaagaaaaaaaaaagaaagctaccctgttacgtaatatttcccaagcaacgcagatgattgata 45547723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 601 - 824
Target Start/End: Complemental strand, 45540534 - 45540318
Alignment:
Q  601 agttaatataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaatttttttatttgtc 700  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  45540534 agttaatataaaagtttatttatttgtaaaaatatttttcataagttcaatcccaatcagggcctatgtggttgtggtaaatttaatttttttatttttc 45540435  T
Q  701 taccaaaagtagtttgnnnnnnnnnaagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaag 800  Q
    ||   ||| ||||||          |||||||||||| |||||||||||||||||| |   ||||||||||||||||| ||||||||||||| || ||||    
T  45540434 tattcaaaatagttt----ttttttaagaaactaaaacggattaaattactgaaagcc---agatttcagcacaaggaatgccaaaaccccaactaaaag 45540342  T
Q  801 agtcaattacaagaatgccaaaac 824  Q
    |||||||| ||||||||| |||||    
T  45540341 agtcaattgcaagaatgctaaaac 45540318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 601 - 681
Target Start/End: Complemental strand, 45540776 - 45540695
Alignment:
Q  601 agttaatataaaagcttatttatttgtaaagatattttt-cataagctcaatcccaatcagggcccatgtggttgtggtaaa 681  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  45540776 agttaatataaaagcttatttatttgtaaagatattttttcataagttcaatcccaatcagggcctatgtggttgtggtaaa 45540695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 478 - 625
Target Start/End: Complemental strand, 32924313 - 32924167
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| | || |||  |||||||| |||||||||| ||||| | ||||||||| |  ||||||||||||  ||||||||  ||||||||    
T  32924313 ttgagcttatgcaaaacagcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagataaa 32924214  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 625  Q
    |||||| ||| | ||||||||||| |||||||||||||||||||||||    
T  32924213 attttc-ttagtgaaaacttatgaattaatataaaagcttatttattt 32924167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 504 - 650
Target Start/End: Original strand, 32975698 - 32975845
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |||||| |||  | | ||||||||| |    
T  32975698 aaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaacttatgaat 32975797  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  32975798 taatataaaagcttatttatttgcataagctatttttcataagctcaa 32975845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 24504154 - 24504057
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    |||||||||||||||||||||  ||||||||  | |||||||||||||||||| |||||||||| ||||| |||||||||||||||||  ||||||||    
T  24504154 aagaaactaaaatggattaaaaaactgaaagcatagagatttcagcacaaggaatgccaaaacctcagctaaaagagtcaattacaagtgtgccaaaa 24504057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 726 - 806
Target Start/End: Original strand, 13089766 - 13089850
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggat----tgccaaaaccccagctgaaagagtcaa 806  Q
    ||||| ||||||||||||| |||||| |||| |||||||||||||||||||||     |||||||||||||||||||||||||||    
T  13089766 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggaaggagtgccaaaaccccagctgaaagagtcaa 13089850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 34286638 - 34286492
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  |||||| |||||  ||| ||||  |||||| |||||||||||   | ||||||||| |    
T  34286638 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtgaaaa-acagcttatgaagatacaattttcgttagggagaacttatgaat 34286540  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||||    
T  34286539 taatataaaagcttatttatttgcataacctatttttcataagctcaa 34286492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 726 - 822
Target Start/End: Original strand, 8444263 - 8444356
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 822  Q
    ||||||||||||||||||||| || |   || || ||||||||||||||| || |||||||||||||| | |||||||||||||||||| |||||||    
T  8444263 aagaaactaaaatggattaaaataat---agcctagagatttcagcacaaagagtgccaaaaccccagttaaaagagtcaattacaagagtgccaaa 8444356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 515 - 650
Target Start/End: Original strand, 38895681 - 38895817
Alignment:
Q  515 cttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaag 614  Q
    ||||||||| ||||||| |||||||||||  ||||||||||||  | || |||  |||||| ||| || |||| | ||||||||| | |||||||||||     
T  38895681 cttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtgaaaacttataaattaatataaaaa 38895780  T
Q  615 cttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||||||||||| ||  || |||||||||||||||    
T  38895781 cttatttatttgtataaactaattttcataagctcaa 38895817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 24350594 - 24350447
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    |||||| || |||||||| | ||||||| |||||||| ||  || |||||||||  | | ||||  |||||| ||||||||||| ||| ||||||||| |    
T  24350594 aaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagtaagaacttatgaat 24350495  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  24350494 taacataaaatcttatttatttgcataagctagttttcataagctcaa 24350447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 726 - 813
Target Start/End: Original strand, 24581449 - 24581536
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 813  Q
    ||||| |||||||| |||| |||| |||||| ||| | ||||||| | ||||| || ||||||||||||||||||| |||||||||||    
T  24581449 aagaagctaaaatgaattatattattgaaagtctgaatatttcagtataaggagtgtcaaaaccccagctgaaagaatcaattacaag 24581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 480 - 653
Target Start/End: Original strand, 14942411 - 14942585
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    ||||||||| |||| |||| ||| | ||||||| |||||| | | ||||| | |||||||||||  ||||||||||||  || |||||  |||||  |||    
T  14942411 gagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgacttatgaagatgcaat 14942510  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagctcaatcc 653  Q
    ||| ||||  || ||||||| | |||| |||||| ||||||||||||  |||| |||||| ||||||||| ||||    
T  14942511 ttttgttagcaagaacttataaattaacataaaaccttatttatttgcaaaagctattttccataagctccatcc 14942585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 547 - 644
Target Start/End: Complemental strand, 25465878 - 25465781
Alignment:
Q  547 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 644  Q
    |||||||||||  ||||||||  |||||| |||||| |||| | ||||||||||| |||| ||||||||||||||||||| | ||| ||||||||||||    
T  25465878 agtttatgaaaa-acaacttatgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 25465781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 478 - 650
Target Start/End: Original strand, 32131425 - 32131598
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| | || ||| ||||||||| ||||||||   ||||||  ||| |||| ||  |||||||||||   ||||| ||  |||||| |    
T  32131425 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaacctatgaagataca 32131524  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||  || | | ||||||||| |||| |||||||||||| |||||| | ||  ||||||||||||||||||    
T  32131525 attttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataaactatttttcataagctcaa 32131598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 41145473 - 41145324
Alignment:
Q  504 aaataaatacgcttttattttttatt---cacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatg 600  Q
    ||||||||| |||||||||| |||||   || ||| |||||||  ||||||||||||  |||||||  |||||||  |||||| ||| | | ||||||||    
T  41145473 aaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaacaacttt-aaagatacgattttcattagtgagaacttatg 41145375  T
Q  601 agttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    | |||||||| || |||||||||||| | ||  ||||||||||||||||||    
T  41145374 aattaatatataaacttatttatttgcataaactatttttcataagctcaa 41145324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 726 - 813
Target Start/End: Original strand, 10230104 - 10230191
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 813  Q
    ||||||||||||| |||||||| | |||||| ||||||||||||||| ||| | || |||| |  || || |||||||||||||||||    
T  10230104 aagaaactaaaattgattaaatcaatgaaagtctggagatttcagcataagaagtgtcaaagcttcaactaaaagagtcaattacaag 10230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 515 - 626
Target Start/End: Complemental strand, 14725029 - 14724918
Alignment:
Q  515 cttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaag 614  Q
    ||||||| | ||||| | ||| |||||||  || |||||||||  ||||||||   || || ||||||||||||||| ||||||||| |||| ||||||     
T  14725029 cttttatatattatttataagattgttaatgtaatttatgaaaaaacaacttatgtaggtataattttcgttaataagaacttatgaattaagataaaaa 14724930  T
Q  615 cttatttatttg 626  Q
    ||||||||||||    
T  14724929 cttatttatttg 14724918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 481 - 650
Target Start/End: Complemental strand, 16972455 - 16972284
Alignment:
Q  481 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgt-taaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    ||||||||||||| || |  || ||||||||| |||| ||| | ||||||| ||| |||| |||  ||||| ||||||  ||| ||||  |||||| |||    
T  16972455 agcttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaat 16972356  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||||| | | ||||||||| | |||||||||| ||||||||||| | ||| ||||||  ||||||||||    
T  16972355 tttcgttagtgataacttatgaatcaatataaaagtttatttatttgcataagctattttgaataagctcaa 16972284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 570 - 625
Target Start/End: Complemental strand, 25333710 - 25333655
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 625  Q
    |||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||    
T  25333710 aagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttattt 25333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 504 - 647
Target Start/End: Original strand, 28879069 - 28879210
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaa--acttatga 601  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||     ||| |||| | |||  ||||||||    
T  28879069 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat-----ttttgttagtgaaagaacttatga 28879163  T
Q  602 gttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
     |||| ||||||||||||||||||| | ||| |||||||||||||||    
T  28879164 attaacataaaagcttatttatttgcataagctatttttcataagct 28879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 537 - 653
Target Start/End: Original strand, 2563402 - 2563519
Alignment:
Q  537 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatat 635  Q
    |||||||| ||||||||||||  |||||||   || ||| ||||||  ||| ||| | ||||||| |||| |||||||| || ||||||||| ||| | |    
T  2563402 ttgttaaagtagtttatgaaaaaacaacttttgaatatacaatttttattagtaagatcttatgaattaacataaaagcataattatttgtataagctct 2563501  T
Q  636 ttttcataagctcaatcc 653  Q
    ||||||||||||||||||    
T  2563502 ttttcataagctcaatcc 2563519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 578 - 642
Target Start/End: Original strand, 24087256 - 24087321
Alignment:
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcat 642  Q
    |||||||||||| ||||||||| | |||| ||||||||||||||||||| | ||| ||||||||||    
T  24087256 attttcgttaatgaaaacttataaattaaaataaaagcttatttatttgcataagctatttttcat 24087321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 726 - 790
Target Start/End: Original strand, 4034301 - 4034365
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccc 790  Q
    ||||| |||||||| |||| |||||| |||| ||| |||||| |||||||||| |||||||||||    
T  4034301 aagaagctaaaatgaattatattactaaaagtctgaagattttagcacaaggagtgccaaaaccc 4034365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 527 - 650
Target Start/End: Complemental strand, 10298978 - 10298855
Alignment:
Q  527 attcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    ||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| |||||| | ||||||||| |||| |||||||| ||| ||||||    
T  10298978 attcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaacttatgaattaacataaaagc-tatctatttg 10298880  T
Q  627 ta-aagatatttttcataagctcaa 650  Q
     | ||| |||| |||||||||||||    
T  10298879 cataagctattattcataagctcaa 10298855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 26047057 - 26046978
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 557  Q
    ||||||||||| |||| |||| ||| ||| || || |||||||||| ||||| ||||||||||| |  ||||||||||||    
T  26047057 ttgagcttatgtaaaacaacttatgcaaaaaagtaagcttttatttattattaacaagcttgttgaggtagtttatgaaa 26046978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 653
Target Start/End: Original strand, 30974043 - 30974150
Alignment:
Q  547 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 645  Q
    |||||||||||  ||||||||  ||  || ||||||||||| ||| | ||||||| |||  ||||||||||||||||||| | ||| | |||||||||||    
T  30974043 agtttatgaaaaaacaacttatgaatttacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataag 30974142  T
Q  646 ctcaatcc 653  Q
    | ||||||    
T  30974143 cacaatcc 30974150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 504 - 653
Target Start/End: Original strand, 2669659 - 2669809
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| ||| | || | ||||| | ||| |||||||  ||||||||||||  ||||||||  || ||| | ||||| ||| ||  | ||||||| |    
T  2669659 aaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcattagtaggatcttatgaat 2669758  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||| ||||||||||||||||||  | ||| | |||||||||||||||||||    
T  2669759 taacataaaagcttatttattttcataagctctttttcataagctcaatcc 2669809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 570 - 647
Target Start/End: Complemental strand, 9131137 - 9131059
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    |||||| ||||||||||| |   ||||||||| |||| ||||||| ||||||||||| | ||| |||||||||||||||    
T  9131137 aagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagctatttttcataagct 9131059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 593 - 650
Target Start/End: Original strand, 10213795 - 10213853
Alignment:
Q  593 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||| |||| ||| ||||||||||||||| | ||| ||||||||||||||||||    
T  10213795 aacttatgaattaacatacaagcttatttatttgcataagctatttttcataagctcaa 10213853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 524
Target Start/End: Complemental strand, 11988354 - 11988308
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 524  Q
    ||||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  11988354 ttgagcttatgaaaaataacttatgtaaataaatatgcttttatttt 11988308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 799
Target Start/End: Original strand, 25582581 - 25582654
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 799  Q
    |||||||||||||||| || ||||||||| | ||| | ||||||||||||| | ||| ||||  ||||||||||    
T  25582581 aagaaactaaaatggaatatattactgaacgcctgaatatttcagcacaagaagtgctaaaaatccagctgaaa 25582654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 479 - 524
Target Start/End: Complemental strand, 29713334 - 29713289
Alignment:
Q  479 tgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 524  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  29713334 tgagcttatgaaaaataacttatgtaaataaataagcttttatttt 29713289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 650
Target Start/End: Original strand, 35055499 - 35055579
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||| | | | ||||||| |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  35055499 aagatacaattttcgttagtgagagcttatgaattaa-ataaaagcttatttatttacataagctatttttcataagctcaa 35055579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 537 - 626
Target Start/End: Complemental strand, 36907686 - 36907597
Alignment:
Q  537 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    |||||||  ||||||||||||  |||||||   || ||| ||||||||||| ||| | ||||||| |||  |||||||||||||||||||    
T  36907686 ttgttaaggtagtttatgaaaaaacaacttgtgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttg 36907597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 650
Target Start/End: Complemental strand, 37410922 - 37410841
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||| || |||||||||||  | ||| ||||||||||||||||||    
T  37410922 aagatacaattttcgttagtaagaacttataaattaaaatataaacttatttatttacataagctatttttcataagctcaa 37410841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 650
Target Start/End: Original strand, 42102183 - 42102264
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||||| | |  |||| | |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  42102183 aagatacaattttcgttaatgagaggttataaattaaaataaaagcttatttatttacataagctatttttcataagctcaa 42102264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 478 - 653
Target Start/End: Original strand, 21788442 - 21788618
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||| |||||||||| | || ||| ||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||  ||||||||  ||||||||    
T  21788442 ttgagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaa 21788541  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    |||||||||| | | | ||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  21788542 attttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataagttatttttcataagctcaatcc 21788618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 726 - 824
Target Start/End: Original strand, 2702258 - 2702356
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 824  Q
    ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2702258 aagaaactaaaatggattaaaatactgaaagcctcaagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 2702356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 12410887 - 12410790
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||| || || ||||||||||||| |||||||||||||||||| ||||||||    
T  12410887 aagaaactaaaatggattaaaatactgaaagcctggagatttcatcacaaagagtgacaaaaccccagctaaaagagtcaattacaagagtgccaaaa 12410790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 12422947 - 12422850
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||| || || ||||||||||||| |||||||||||||||||| ||||||||    
T  12422947 aagaaactaaaatggattaaaatactgaaagcctggagatttcatcacaaagagtgacaaaaccccagctaaaagagtcaattacaagagtgccaaaa 12422850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 726 - 808
Target Start/End: Complemental strand, 27271740 - 27271658
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaatt 808  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||    
T  27271740 aagaaactaaaatagattaaattactgaaagcctggagatttcagcacaaggagtgtcaaaactccagctgaaagagtcaatt 27271658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 6764520 - 6764423
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| |||||||||   ||||||||||||| ||||| || ||||||||||||| |||||||||||||||||| ||||||||    
T  6764520 aagaaactaaaatggattaaaatactgaaagctcggagatttcagcataaggagtgtcaaaaccccagctaaaagagtcaattacaagagtgccaaaa 6764423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 37648065 - 37647968
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    |||||| |||||||||||||| |||||||||  |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| || |||||    
T  37648065 aagaaattaaaatggattaaaatactgaaagtttggagatttcagcacaaggagtgccaaaacctcagctaaaagagtcaattacaagagtgtcaaaa 37647968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 726 - 815
Target Start/End: Complemental strand, 11031898 - 11031809
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 815  Q
    ||||| |||||||| || | |||| |||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  11031898 aagaagctaaaatgaatgatattattgaaagtctggagatttcagcataaggagtgccaaaaccccagctgaaagagtcaaatacaagaa 11031809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 733 - 813
Target Start/End: Original strand, 34394492 - 34394572
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 813  Q
    ||||||| |||| ||||||||||| ||  |||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34394492 taaaatgaattatattactgaaagcctaaagatttcaacacaaggagtgccaaaaccccagctgaaagagtcaattacaag 34394572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 546 - 647
Target Start/End: Original strand, 8832510 - 8832612
Alignment:
Q  546 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 644  Q
    ||||||||||||  |||  ||||||||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||| | ||| ||||||||||||    
T  8832510 tagtttatgaaaacacaggttagaaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 8832609  T
Q  645 gct 647  Q
    |||    
T  8832610 gct 8832612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 495 - 650
Target Start/End: Original strand, 4004821 - 4004977
Alignment:
Q  495 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 594  Q
    |||| ||| |||||||||  ||||||| |  |||||| |||||| ||||| |||||||||||| |||||||||  ||| || ||||||||||| | | ||    
T  4004821 aacttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgagaa 4004920  T
Q  595 cttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||| ||| ||||||||||| ||||| || | ||| |||||||||||| |||||    
T  4004921 cttatgaattactataaaagcttttttatctgcataagctatttttcataaactcaa 4004977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 478 - 647
Target Start/End: Original strand, 4026911 - 4027080
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||||||||||||||   || ||| ||||||||| |||||||| | |||| || |||||||| ||  ||||||||||||  ||| ||||  |||||| |    
T  4026911 ttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataca 4027009  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||||| |||| | | ||||||||| |||| |||| |||||||||||||| | ||| |||||||||||||||    
T  4027010 atttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagctatttttcataagct 4027080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 473 - 567
Target Start/End: Complemental strand, 34913496 - 34913402
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 567  Q
    ||||||||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| ||| ||||||| |||||||||||||  ||||||||    
T  34913496 ttggattgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaactta 34913402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 482 - 650
Target Start/End: Original strand, 15155802 - 15155971
Alignment:
Q  482 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 581  Q
    ||||||| |||| |||| ||||||||||||| |||||||| | ||||| | || ||||||||   |||||||||||  |||| |||  ||| || |||||    
T  15155802 gcttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaacaatttaagaaggtacaattt 15155901  T
Q  582 tcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
     ||||||| | ||||||||| |||| |||||| |||||||||||  | ||| | ||||||||||||||||    
T  15155902 ccgttaatgagaacttatgaattaagataaaaacttatttattttcataagctctttttcataagctcaa 15155971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 478 - 650
Target Start/End: Complemental strand, 33321413 - 33321240
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| ||||  || ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |    
T  33321413 ttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataca 33321314  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||| |||| | | | ||| ||| |||| ||||| | ||||||||||| | ||| |||||| |||||||||||    
T  33321313 atttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagctattttacataagctcaa 33321240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 525 - 626
Target Start/End: Original strand, 42064883 - 42064984
Alignment:
Q  525 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 624  Q
    ||||||| |||||||||||  |||||||| |||  | ||||||  ||||||  |||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  42064883 ttattcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaacttatgaattaatataaaagcttatttatt 42064982  T
Q  625 tg 626  Q
    ||    
T  42064983 tg 42064984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 516 - 650
Target Start/End: Complemental strand, 36501578 - 36501443
Alignment:
Q  516 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 615  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||||||||| ||||| | | |||| |||| |||| ||||||||    
T  36501578 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacataaaagc 36501479  T
Q  616 ttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||| | ||| ||||||||| ||||||||    
T  36501478 ttatttatttgcataagctatttttcacaagctcaa 36501443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 570 - 647
Target Start/End: Original strand, 38216096 - 38216174
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    |||||| ||||||||||| | | |||||||||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  38216096 aagatacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataagctatttttcgtaagct 38216174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 653
Target Start/End: Original strand, 11776997 - 11777145
Alignment:
Q  506 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtta 605  Q
    ||||||| |||||||| | ||||| | |||||||||||  ||||||||||||  ||| ||||  |||||| | |||| |||| | | ||||||| |  ||    
T  11776997 ataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagtgagaacttataaacta 11777096  T
Q  606 atataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    | |||||| |||||||||||| | ||| ||||||| |||||||||||||    
T  11777097 acataaaaccttatttatttgcagaagctatttttaataagctcaatcc 11777145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 25836787 - 25836641
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||  ||||  |||| | |||| |||||| | | |||||||||      
T  25836787 aaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgttagtgagaacttatga-a 25836689  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||| ||||||||||||||||||| | ||| |||| |||||||||||||    
T  25836688 taacataaaagcttatttatttgcataaggtattcttcataagctcaa 25836641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 7900954 - 7901031
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 803  Q
    ||||| |||||||| | || ||||||||||| ||| ||||||||||| ||||  |||| ||| |||||||||||||||    
T  7900954 aagaagctaaaatgaaatatattactgaaagcctgaagatttcagcataaggtgtgccgaaaacccagctgaaagagt 7901031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 481 - 626
Target Start/End: Original strand, 29774733 - 29774878
Alignment:
Q  481 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 580  Q
    |||||||||| || |||| ||| |||||||||  |||||||   |||||||  || |||||||  ||||||||||||  ||  ||||  || ||| ||||    
T  29774733 agcttatgcataacaacttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaatt 29774832  T
Q  581 ttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    ||||||| | | ||||||||| ||||  ||||||||||||||||||    
T  29774833 ttcgttagtgagaacttatgaattaacgtaaaagcttatttatttg 29774878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 478 - 650
Target Start/End: Original strand, 37409628 - 37409801
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||| ||||||||| |||| ||| ||||||||| |||||||  | |||||| | || |||| ||  ||||||||||||  |||| |||  || ||| |    
T  37409628 ttgagcgtatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaataca 37409727  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||| |||| | |||||||   | |||| |||||| |||| ||| ||||| ||| ||||||||||||||||||    
T  37409728 atttttgttattgaaaacttcgaaattaacataaaatcttagttacttgtataagctatttttcataagctcaa 37409801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 473 - 521
Target Start/End: Complemental strand, 21788620 - 21788572
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 521  Q
    |||||||||||||||| ||||||||| ||| ||||||||| ||||||||    
T  21788620 ttggattgagcttatgaaaaataacttatgcaaataaataagcttttat 21788572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 560 - 628
Target Start/End: Original strand, 35731203 - 35731271
Alignment:
Q  560 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 628  Q
    |||||||| ||| ||||||||||| ||||| ||| ||||||| ||||  ||||| ||||||||||||||    
T  35731203 acaacttataaaaataaaattttcattaatgaaatcttatgaattaacgtaaaatcttatttatttgta 35731271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 480 - 651
Target Start/End: Complemental strand, 38471890 - 38471718
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    |||||||||||||| | || ||| ||||||||| |||||||| | ||||  | |||||| || |  ||||||||||||  |||  |||  ||| || |||    
T  38471890 gagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaat 38471791  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaat 651  Q
    |||||||| | | ||||||||| |||| |||| |  ||||||||||||| ||| | ||||||||||| |||||    
T  38471790 tttcgttagtgagaacttatgaattaagataacaatttatttatttgtataagttctttttcataagttcaat 38471718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 755843 - 755764
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 557  Q
    |||||||||||||||| |||| | | |||||| || |||||||| | ||||||| ||||||||||   ||||||||||||    
T  755843 ttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagtttatgaaa 755764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 650
Target Start/End: Complemental strand, 30382300 - 30382197
Alignment:
Q  548 gtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagc 646  Q
    ||||| ||||| |||| |||| |||||| ||||||||||| | ||| ||||| | |||| | ||||||||||||||||  | ||  ||||||||||||||    
T  30382300 gtttacgaaagaacaatttaggaagatacaattttcgttagtgaaagcttataaattaaaacaaaagcttatttatttacataatctatttttcataagc 30382201  T
Q  647 tcaa 650  Q
    ||||    
T  30382200 tcaa 30382197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 560 - 626
Target Start/End: Complemental strand, 7480918 - 7480852
Alignment:
Q  560 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    ||||||||| |||||| ||||||| ||| | | ||||||||| |||| |||||| ||||||||||||    
T  7480918 acaacttaggaagatacaattttcattagtcagaacttatgaattaacataaaaacttatttatttg 7480852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 560 - 653
Target Start/End: Complemental strand, 12950134 - 12950040
Alignment:
Q  560 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||||||||  || ||| ||||||||||| ||| | ||||||| |||| ||||||||||| ||||||| | | | | |||||||||||||||||||    
T  12950134 acaacttatgaatatagaattttcgttagtaagatcttatgaattaacataaaagcttaattatttgcatatgctctttttcataagctcaatcc 12950040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 577 - 650
Target Start/End: Complemental strand, 22898359 - 22898285
Alignment:
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||| | |||||||||   |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  22898359 aattttcgttagtcaaaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctcaa 22898285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 569 - 626
Target Start/End: Complemental strand, 23956274 - 23956217
Alignment:
Q  569 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    ||||||| ||||||||||||| | ||||||| | |||| |||||| ||||||||||||    
T  23956274 aaagatacaattttcgttaatgagaacttataaattaacataaaaacttatttatttg 23956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 1e-40; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 473 - 653
Target Start/End: Complemental strand, 44613579 - 44613398
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    ||||||||||||||||||||| | || ||| ||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||  ||||||||  | |    
T  44613579 ttggattgagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacg 44613480  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||| ||||||  ||||| | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  44613479 atacaatttttattaattagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 44613398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 726 - 823
Target Start/End: Original strand, 28782015 - 28782112
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  28782015 aagaaactaaaatggattaaaatactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 28782112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 726 - 824
Target Start/End: Complemental strand, 1032320 - 1032222
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 824  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  1032320 aagaaactaaattggactaaattactgaaagcctggagatttcagcacagggaatgctaaaaccccagctgaaagagtcaattacaagaatgccaaaac 1032222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 9949030 - 9948933
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||| ||||||||    
T  9949030 aagaaactaaaatggattaaaatactgaaagcctgaagatttcagcacaaggagtaccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 9948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 726 - 810
Target Start/End: Complemental strand, 11621464 - 11621380
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattac 810  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11621464 aagaagctaaaatggattatattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaattac 11621380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 726 - 823
Target Start/End: Original strand, 9942602 - 9942699
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||| || || ||| |||||||||||||| ||||||||    
T  9942602 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgtcaaaacctcaactaaaatagtcaattacaagagtgccaaaa 9942699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 726 - 806
Target Start/End: Original strand, 40871302 - 40871382
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 806  Q
    ||||| ||||||||||||| |||| | |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  40871302 aagaagctaaaatggattatattattaaaagcctggagatttcagcacaaggagtgccaaaatcccagctgaaagagtcaa 40871382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 478 - 622
Target Start/End: Complemental strand, 48021748 - 48021605
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||| ||||| || | ||| ||||||||| ||| |||||| ||||||| |||||||||||| ||||||||||||  | |||| |  |||||| |    
T  48021748 ttgagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatgaaa-aataactaatgaagataca 48021650  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttattta 622  Q
    |||||| ||| | ||||||||||| |||||||||||  |||||||    
T  48021649 attttcattagtgaaaacttatgaattaatataaaaaattattta 48021605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 525 - 650
Target Start/End: Original strand, 39279461 - 39279588
Alignment:
Q  525 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaa-taaaaacttatgagttaatataaaagcttatttat 623  Q
    ||||||| |||||||||||  | ||||||||||   || ||||| |||||| |||||||||||| | | ||| ||||| |||| ||||||||||||||||    
T  39279461 ttattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgttaattgagaacctatgaattaacataaaagcttatttat 39279560  T
Q  624 ttgta-aagatatttttcataagctcaa 650  Q
    ||||| ||| ||||||||||||||||||    
T  39279561 ttgtataagctatttttcataagctcaa 39279588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 473 - 626
Target Start/End: Complemental strand, 28759946 - 28759790
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    |||||||||| ||||| |||| |||| ||||||| ||| | | |||||||| ||||||| |||||||||||  |||||||| |||  | |||||| ||||    
T  28759946 ttggattgagtttatgtaaaacaacttatgaaaaaaaaaaagtttttatttattattcataagcttgttaaggtagtttataaaaaaataacttataaag 28759847  T
Q  573 ataa---aattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    ||||   ||| || |||| ||| ||||||||| || |||||||||||||||| ||||    
T  28759846 ataatataatatttgttagtaagaacttatgaattgatataaaagcttatttgtttg 28759790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 478 - 650
Target Start/End: Complemental strand, 29390651 - 29390479
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||| ||||| |||| |||| ||| |||||||||  |||| || | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |    
T  29390651 ttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaa-aacaacttatgaagataca 29390553  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||   | || |||||| |||| ||||||||||||||||||| | ||  ||||||||||||||||||    
T  29390552 attttcgttagctagaatttatgaattaacataaaagcttatttatttgcataaactatttttcataagctcaa 29390479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 480 - 650
Target Start/End: Original strand, 22032749 - 22032920
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    ||||||||| |||| |||| ||| ||||||||| | |||||| | ||||| | |||| ||||||  ||||||||||||  |||| |||  ||| || |||    
T  22032749 gagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaat 22032848  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||||| | | ||||||| | |||| |||||| |||||||||||| | ||| | ||||||||||||||||    
T  22032849 tttcgttagtgagaacttataaattaagataaaaacttatttatttgcataagctttttttcataagctcaa 22032920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 504 - 650
Target Start/End: Original strand, 29378656 - 29378803
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||| |  || |||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| ||| ||||||||| |    
T  29378656 aaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaat 29378755  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||  |||||||||||||||||| | ||| |||||||||||| |||||    
T  29378756 taacgtaaaagcttatttatttgcataagctatttttcataaactcaa 29378803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 533 - 653
Target Start/End: Complemental strand, 47654460 - 47654339
Alignment:
Q  533 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aag 631  Q
    |||||||||||  ||||||||||||  |||  |||  ||| || ||||||||||| | | ||||||||| |||| |||||| |||||||||||| | |||    
T  47654460 aagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataag 47654361  T
Q  632 atatttttcataagctcaatcc 653  Q
    || |||||||||||||||||||    
T  47654360 atctttttcataagctcaatcc 47654339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 515 - 653
Target Start/End: Complemental strand, 37465951 - 37465811
Alignment:
Q  515 cttttattttttattcacaagcttgttaaaatagtttat-gaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 613  Q
    ||||||||| ||||||| || |||||||| ||||||||| ||||  ||||||||  |||||| ||| || |||    | ||||||||| |||||||||||    
T  37465951 cttttatttattattcataaacttgttaagatagtttatagaaaaaacaacttattaagatacaatatttgttggcgagaacttatgaattaatataaaa 37465852  T
Q  614 gcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||||||||||||| | ||| || ||||||||||||| ||||    
T  37465851 gcttatttatttgcataagctaattttcataagctcgatcc 37465811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 504 - 626
Target Start/End: Original strand, 47648549 - 47648670
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    |||||||||  ||||||||| |||||||| | |||||||| |||||||||||||  ||||  ||  ||||| || ||||||||| | ||||||||||| |    
T  47648549 aaataaataaacttttatttattattcacgaacttgttaagatagtttatgaaaaaacaatctattaagat-aatttttcgttagtgaaaacttatgaat 47648647  T
Q  604 taatataaaagcttatttatttg 626  Q
    ||||||||||   ||||||||||    
T  47648648 taatataaaaatatatttatttg 47648670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 478 - 650
Target Start/End: Original strand, 38372543 - 38372716
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| | || ||| ||||||||| ||| |||| | ||||||| ||| |||| ||  ||||||| ||||   || || |  |||| | |    
T  38372543 ttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaaca 38372642  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||||||| | | ||||||||| |||| ||||||||| ||||||||| |  || ||||||||||||||||||    
T  38372643 attttcgttagtgagaacttatgaattaacataaaagctgatttatttgcattagctatttttcataagctcaa 38372716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 626
Target Start/End: Complemental strand, 14691364 - 14691252
Alignment:
Q  514 gcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 613  Q
    |||||||| | ||||||| |||||||| ||  || |||||||||  |||| |||  |||||| ||||||||||| | | ||||||||| |||| ||||||    
T  14691364 gcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaacttatgaattaacataaaa 14691265  T
Q  614 gcttatttatttg 626  Q
    | |||||||||||    
T  14691264 ggttatttatttg 14691252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 647
Target Start/End: Original strand, 22575573 - 22575741
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    ||||||||| |||| | || ||| ||||||||||| |||||| | ||||| | ||| ||||||| ||| |||||||||  |||  |||  |||||| |||    
T  22575573 gagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaagatacaat 22575672  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    |||||||| ||| | ||||| | |||| |||||| ||||||||| |  | ||| |||||||||||||||    
T  22575673 tttcgttagtaagagcttataaattaaaataaaaacttatttatctacataagctatttttcataagct 22575741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 593 - 647
Target Start/End: Original strand, 33204934 - 33204989
Alignment:
Q  593 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||||||||| |||| ||||||||||||||||||| | |||||||||||||||||||    
T  33204934 aacttatgaattaacataaaagcttatttatttgcataagatatttttcataagct 33204989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 728 - 806
Target Start/End: Original strand, 12622906 - 12622984
Alignment:
Q  728 gaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 806  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||| || || || |||||| |||  ||| ||||||||    
T  12622906 gaaactaaaatggattatattactgaaagcctggagattttagcataaagagtgtcaaaactccaattgatagagtcaa 12622984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 650
Target Start/End: Complemental strand, 16932939 - 16932858
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16932939 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16932858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 650
Target Start/End: Complemental strand, 16938322 - 16938241
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16938322 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16938241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 650
Target Start/End: Original strand, 16958892 - 16958973
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16958892 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16958973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 650
Target Start/End: Complemental strand, 33288084 - 33288003
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| | ||||||||| | ||||||||||| |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  33288084 aagatacagttttcgttagtgaaaacttatgaattaacataaaaacttatttatttggataagctagttttcataagctcaa 33288003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 733 - 813
Target Start/End: Original strand, 17193893 - 17193972
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 813  Q
    ||||||| |||||| ||||||||| | ||||||||||| | ||||| || | ||| ||||||||||| |||||||||||||    
T  17193893 taaaatgtattaaaatactgaaagccgggagatttcagtataaggagtgtc-aaatcccagctgaaacagtcaattacaag 17193972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 733 - 803
Target Start/End: Complemental strand, 15669787 - 15669718
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 803  Q
    ||||||||| || ||||||||| | ||||| ||||||||| ||| | ||| ||||||||||||||||||||    
T  15669787 taaaatggaatatattactgaa-gcctggaaatttcagcataagaagtgcaaaaaccccagctgaaagagt 15669718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 488 - 650
Target Start/End: Original strand, 34922926 - 34923091
Alignment:
Q  488 gcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagta--caacttagaaagataaaattttcgt 585  Q
    |||||| |||| ||| ||||||||| |||||||| | ||||||| ||| |||| ||  |||||||| |||  |  || |||   |||||| | |||||||    
T  34922926 gcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaaaacagcttgtgaagatacacttttcgt 34923025  T
Q  586 taataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    || | | |||||||||  ||| ||||||||||||||||||| | ||| ||||||| ||||||||||    
T  34923026 tagtgagaacttatgaactaacataaaagcttatttatttgcataagctattttttataagctcaa 34923091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 504 - 653
Target Start/End: Original strand, 35809101 - 35809251
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| || || || | ||||| | |||||||||||  ||||||||||||  ||||||||  || ||| ||||||||  | ||| |  |||||| |    
T  35809101 aaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaacttaagaatatacaattttcgccagtaagattttatgaat 35809200  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||| ||||||||||| ||||||  | ||| | |||||||||||||||||||    
T  35809201 taacataaaagcttaattatttacataagctctttttcataagctcaatcc 35809251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 517 - 626
Target Start/End: Complemental strand, 8180653 - 8180544
Alignment:
Q  517 tttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagct 616  Q
    ||||||| ||||| | |||||||||||  |||||||| |||    |||||| ||| ||| ||| ||  ||| | ||||||||||| |||||||||||| |    
T  8180653 tttatttattatttataagcttgttaaggtagtttataaaaaattaacttataaaaatataatatttattagtgaaaacttatgaattaatataaaagtt 8180554  T
Q  617 tatttatttg 626  Q
    ||||||||||    
T  8180553 tatttatttg 8180544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 18299447 - 18299523
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 803  Q
    ||||| |||||||||| || ||||||||| | ||||| | ||||||||||| | ||| ||||||||| ||||||||||    
T  18299447 aagaagctaaaatggaatatattactgaa-gcctggaaagttcagcacaagaagtgcaaaaaccccatctgaaagagt 18299523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 803
Target Start/End: Complemental strand, 29627029 - 29626953
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 803  Q
    ||||| |||||||||| || | ||||||| | ||||| |||| |||||||| | ||| ||||||||||||||||||||    
T  29627029 aagaagctaaaatggagtataatactgaa-gcctggaaattttagcacaagaagtgcaaaaaccccagctgaaagagt 29626953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 489 - 651
Target Start/End: Original strand, 43391717 - 43391880
Alignment:
Q  489 caaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaa 588  Q
    ||||| |||| ||| |||||||||  ||| | ||| ||||||| ||| |||||||  ||||||||||||  | || |||  |||||| |||||| |||      
T  43391717 caaaacaacttatgtaaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttttgtttg 43391816  T
Q  589 taaaaacttatgagttaatataaaagcttatttattt--gtaaagatatttttcataagctcaat 651  Q
    | ||||||||| | | ||||||||| |||||||||||  |||||  |||||||||||| ||||||    
T  43391817 tgaaaacttataaataaatataaaaacttatttatttacgtaaa-ctatttttcataaactcaat 43391880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 43818864 - 43818803
Alignment:
Q  593 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||||||||| |||| |||||| |||||||||||| | ||| | |||||||||||||||||||    
T  43818864 aacttatgaattaagataaaaacttatttatttgcataagctctttttcataagctcaatcc 43818803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 2e-33; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 473 - 653
Target Start/End: Original strand, 41228883 - 41229064
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    ||||||||||||||||||||| | || ||| |  |||||| |||||||||| ||||||| |||||||||||  ||||||||||||  |||||| |  |||    
T  41228883 ttggattgagcttatgcaaaacagcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaag 41228982  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||| ||||||| ||| | | ||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  41228983 atacaattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagctatttttcataagctcaatcc 41229064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 43499397 - 43499300
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  43499397 aagaaactaaaatggattaaaatactgaaagcttggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 43499300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 726 - 824
Target Start/End: Original strand, 39059723 - 39059821
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 824  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||| | ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  39059723 aagaaactaaaatggattaaattactgaaagtctgaagaattcagcacaagcagtgccaaaacccaagctgaaagagttaattacaagaatgtcaaaac 39059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 729 - 806
Target Start/End: Original strand, 37870649 - 37870726
Alignment:
Q  729 aaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 806  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37870649 aaactaaaatggattatattactcaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 37870726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 727 - 822
Target Start/End: Original strand, 36651742 - 36651837
Alignment:
Q  727 agaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 822  Q
    |||||||||||||||||||| ||  |||||  |||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||||    
T  36651742 agaaactaaaatggattaaaatatcgaaagtttggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcagttacaagagtgccaaa 36651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 473 - 647
Target Start/End: Complemental strand, 46704375 - 46704201
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    |||||||||||||||| |||| |||| ||| |||||| || |||||||||| |||||||  ||||||||||  ||||||||||||  ||| ||||  |||    
T  46704375 ttggattgagcttatgtaaaacaacttatgcaaataa-taagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaag 46704277  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||||||||||| ||| | | ||||||||| |||||||||||  ||| ||||||| | ||| |||||||||||||||    
T  46704276 ataaaattttcattagtgagaacttatgaattaatataaaaagttacttatttgcataagttatttttcataagct 46704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 726 - 824
Target Start/End: Original strand, 9896508 - 9896606
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 824  Q
    ||||||||||||||||| |||||| ||||||  |||| |||| |||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||    
T  9896508 aagaaactaaaatggataaaattagtgaaagcttggaaatttaagcacaaggagtgccaaaaccccagatgaaaaagtcaattgcaagaatgccaaaac 9896606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 514 - 650
Target Start/End: Complemental strand, 18630960 - 18630823
Alignment:
Q  514 gcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 613  Q
    |||||||||| |||| ||  ||||||||||  ||||||||||||  ||| ||||  |||||||| ||||||||| | | ||||||||| |||||||||||    
T  18630960 gcttttatttattatccatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaacttatgaattaatataaaa 18630861  T
Q  614 gcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||||| | ||| ||||||||||||||||||    
T  18630860 gcttatttatttgcataagctatttttcataagctcaa 18630823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 478 - 645
Target Start/End: Original strand, 29877624 - 29877792
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| || | ||| ||||||||| |||||||| | ||||||| ||||||| |||  ||||||||||||   || ||||  |||||| |    
T  29877624 ttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagataca 29877723  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 645  Q
    ||||| |||| | | ||||||||| |||| |||||||||||| |||||| | ||| |||||||||||||    
T  29877724 atttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagctatttttcataag 29877792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 478 - 650
Target Start/End: Original strand, 23297423 - 23297593
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||||| || ||| ||||||||| |||||||| | ||||||| ||| |||| ||  |||||||||||   ||| ||||  |||||| |    
T  23297423 ttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatgaa---acagcttatgaagataca 23297519  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||| ||||   | ||||||||| |||  ||||||||||||||||||| | ||| ||||||||||||||||||    
T  23297520 atttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataagctatttttcataagctcaa 23297593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 48591499 - 48591352
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| | |||||| | ||||||| | |||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||||| | ||||||||| |    
T  48591499 aaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaacttatgaat 48591400  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||  |||||||||||||||||| | ||| ||||||||||||||||||    
T  48591399 taacgtaaaagcttatttatttgcataagctatttttcataagctcaa 48591352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 729 - 823
Target Start/End: Complemental strand, 7743669 - 7743575
Alignment:
Q  729 aaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||  ||||||||  |||||||||||||||||||| |||||||||   |||| |||||||||||||||||| || |||||    
T  7743669 aaactaaaatggattaaaaaactgaaagcatggagatttcagcacaaggagtgccaaaacttaagctaaaagagtcaattacaagagtgtcaaaa 7743575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 506 - 626
Target Start/End: Original strand, 36298344 - 36298465
Alignment:
Q  506 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-aaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 604  Q
    ||||||| |||||||||| ||||| | ||  |||||||||||||||||| |||  |||| |||  |||||||| |||| |||||| ||||||||||| ||    
T  36298344 ataaatatgcttttatttgttatttataactttgttaaaatagtttatggaaaaaacaatttatgaagataaattttttgttaatgaaaacttatgaatt 36298443  T
Q  605 aatataaaagcttatttatttg 626  Q
    |||||||||| |||||||||||    
T  36298444 aatataaaagtttatttatttg 36298465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 478 - 625
Target Start/End: Complemental strand, 18424378 - 18424232
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| || | ||  ||||||||| |||||||| | ||||||| || ||||| ||  ||||||||||||  |||| |||  |||||| |    
T  18424378 ttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatgaaaa-acaatttatgaagataca 18424280  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 625  Q
    ||||| |||| | ||||||||||| |||| ||||||||||||||||||    
T  18424279 atttttgttattgaaaacttatgaattaacataaaagcttatttattt 18424232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 729 - 823
Target Start/End: Complemental strand, 42718669 - 42718574
Alignment:
Q  729 aaactaaaatggattaaattactgaaaggctggagatttcagca-caaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| |||||| ||| |||||||| ||| ||||||| ||||| |||| ||||||||    
T  42718669 aaactaaaatggattaaaaaactgaaagcctggagatttcagcaccaaggagtgctaaaaccccggctaaaagagttaattataagagtgccaaaa 42718574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 473 - 567
Target Start/End: Complemental strand, 213053 - 212960
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 567  Q
    ||||||||||||||||||||| |||| ||| ||||||||| | |||||||| ||||||| |||||||||||  ||||||||||||  ||||||||    
T  213053 ttggattgagcttatgcaaaacaacttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactta 212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 726 - 815
Target Start/End: Original strand, 23106753 - 23106842
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 815  Q
    ||||| |||||||  |||| |||||||||||  |||||||||||||| ||||| |||||||||||||  |||||||||||| ||||||||    
T  23106753 aagaagctaaaataaattatattactgaaagtatggagatttcagcataaggagtgccaaaaccccatttgaaagagtcaaatacaagaa 23106842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 2548122 - 2547975
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| | |||||||| |||||||  ||| | ||||  ||||||||||||  |||| |||  ||||||||||||||| |||| | ||||||| | |    
T  2548122 aaataaataagtttttatttgttattcatgagcctattaagttagtttatgaaaaaacaatttatgaagataaaattttcgctaatgagaacttataaat 2548023  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||||||| |||||||||||| | ||| | ||| ||||||||||||    
T  2548022 taatataaaaacttatttatttgcataagctctttctcataagctcaa 2547975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 516 - 650
Target Start/End: Original strand, 17222852 - 17222987
Alignment:
Q  516 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 615  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  |||  |||  |||||| ||||||||||| | | ||||||||| |||| |||||| |    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataaaaac 17222951  T
Q  616 ttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||| | ||| ||||||||||||||||||    
T  17222952 ttatttatttgaataagctatttttcataagctcaa 17222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 504 - 626
Target Start/End: Original strand, 896981 - 897103
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    |||||||||  ||||||| | ||||||| |||||||| ||  ||||||||||||  |||| |||   |||||  |||||||||| | ||||||||| | |    
T  896981 aaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaacttataaat 897080  T
Q  604 taatataaaagcttatttatttg 626  Q
    |||||||||||||||||||||||    
T  897081 taatataaaagcttatttatttg 897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 481 - 647
Target Start/End: Complemental strand, 42611966 - 42611799
Alignment:
Q  481 agcttatgcaaaataactaatgaaaataaatacgcttt-tattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    ||||||||||||| |||| ||| ||||||||| ||||| ||| | ||||||| ||||||||  |  ||||||||||||  ||||||||  |||||| | |    
T  42611966 agcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tagtttatgaaaaaacaacttatgaagatacagt 42611868  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg--taaagatatttttcataagct 647  Q
    |||||| | | | ||||||||| |||| |||||||||||||||||||  ||||  |||||||||||||||    
T  42611867 tttcgt-agtgacaacttatgaattaacataaaagcttatttatttgcataaatctatttttcataagct 42611799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 478 - 587
Target Start/End: Complemental strand, 7206687 - 7206578
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||||||||||| || | || ||| |||| |||| |||||||||| |||||||| ||| ||||||  ||||||||||||  ||||||||  ||||||||    
T  7206687 ttgagcttatgcagaacagcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaacaacttatgaagataaa 7206588  T
Q  578 attttcgtta 587  Q
     |||||||||    
T  7206587 gttttcgtta 7206578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 473 - 649
Target Start/End: Complemental strand, 8057194 - 8057017
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    |||||||||||||||| ||||||||||||| ||| ||||| | |||||||| ||||||| |||||||| ||  ||| ||| ||||  || | |||  |||    
T  8057194 ttggattgagcttatgaaaaataactaatgcaaaaaaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaag 8057095  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgtaaaga-tatttttcataagctca 649  Q
    ||| ||| || |||  | | ||||||| | ||||||||||| ||||||| |||| | ||| || ||||||||||||||    
T  8057094 atacaatatttgttcgtgagaacttataaattaatataaaaacttatttgtttggatagactaattttcataagctca 8057017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 504 - 647
Target Start/End: Original strand, 36740915 - 36741059
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | |||| || |||||||| ||| |||||||||||| ||||  | |  |||||| ||||||| ||| | | ||||||||| |    
T  36740915 aaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaacttatgaat 36741014  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
     || | ||||||||||||||||| | ||| |||||||||||||||    
T  36741015 caacacaaaagcttatttatttgcataagctatttttcataagct 36741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 478 - 625
Target Start/End: Complemental strand, 38345922 - 38345776
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| | || ||  ||||||||| |||||||| |  |||||| ||| |||| ||| ||||||||||||  ||||||||  |||||| |    
T  38345922 ttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagataca 38345824  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 625  Q
    |||||  |||   | ||||||||| |||| ||||||||||||||||||    
T  38345823 atttttattagccagaacttatgaattaacataaaagcttatttattt 38345776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 504 - 626
Target Start/End: Original strand, 7148783 - 7148905
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  |||||| |||||  ||| |||| ||| ||| ||||||| ||| | | ||||||||| |    
T  7148783 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaacttatgaat 7148882  T
Q  604 taatataaaagcttatttatttg 626  Q
    ||  |||||||||||||||||||    
T  7148883 tagcataaaagcttatttatttg 7148905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 481 - 650
Target Start/End: Complemental strand, 12495744 - 12495572
Alignment:
Q  481 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaa--tagtttatgaaagtacaacttagaaagataaaa 578  Q
    |||||| |||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||||  ||||||||||||  ||| || |  |||||| ||    
T  12495744 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 12495645  T
Q  579 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    | ||| ||| | | ||||||| | |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  12495644 tattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaa 12495572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 650
Target Start/End: Original strand, 11298573 - 11298740
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    ||||||||||||||||||||| | || ||| || ||| || |||||||||| |||||||  ||||| ||||  ||||||||||| |           |||    
T  11298573 ttggattgagcttatgcaaaacagcttatgcaagtaattaagcttttatttattattcatgagcttcttaaggtagtttatgaatg-----------aag 11298661  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||| ||||||||| | | |||||| || ||| |||||||| ||||||||||| | ||| ||||||||||||||||||    
T  11298662 ataaagttttcgttagtgagaacttaagaattattataaaagtttatttatttgcataagctatttttcataagctcaa 11298740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 726 - 798
Target Start/End: Complemental strand, 48640836 - 48640764
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaa 798  Q
    |||||||||||||||| || ||||||||| | ||| ||||||||||||||||| ||| |||| ||||| ||||    
T  48640836 aagaaactaaaatggaatatattactgaacgcctgaagatttcagcacaaggagtgctaaaaacccagttgaa 48640764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 733 - 813
Target Start/End: Original strand, 54898895 - 54898975
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 813  Q
    ||||||| | || |||||||||||  ||||||||| || | ||||| || ||||||| |||||||||||||||||||||||    
T  54898895 taaaatgaaatatattactgaaagtttggagattttagtataaggagtgtcaaaacctcagctgaaagagtcaattacaag 54898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 504 - 599
Target Start/End: Complemental strand, 43983457 - 43983362
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttat 599  Q
    ||||||||| || || || | ||||| | ||||||||||| ||||||||| |||  |||||||| ||| ||| ||||||||||||||||| |||||    
T  43983457 aaataaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaacaacttataaacatacaattttcgttaataaaatcttat 43983362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 570 - 628
Target Start/End: Original strand, 48721897 - 48721955
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 628  Q
    |||||| |||||| |||| | | ||||||||| ||||||||||||||||||||||||||    
T  48721897 aagatataatttttgttagtgagaacttatgaattaatataaaagcttatttatttgta 48721955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 481 - 557
Target Start/End: Original strand, 948060 - 948136
Alignment:
Q  481 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 557  Q
    ||||||||||||||| || ||||||||||||| |||||||| | ||||||| ||  |||| ||  ||||||||||||    
T  948060 agcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaa 948136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Original strand, 3564205 - 3564284
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 557  Q
    |||||||||||||||| | || |||||||||||||  ||||||| | ||||||| ||| |||| ||  ||||||||||||    
T  3564205 ttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaa 3564284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 647
Target Start/End: Original strand, 8130563 - 8130634
Alignment:
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    |||||| |||| | ||||||||||| |||| |||||| |||||||||||| | ||| |||||||||||||||    
T  8130563 aatttttgttagtgaaaacttatgaattaacataaaaacttatttatttgcacaagctatttttcataagct 8130634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 43699584 - 43699505
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 557  Q
    ||||||||||| |||| |||| ||  ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||    
T  43699584 ttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaa 43699505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 46175902 - 46175953
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 524  Q
    |||||||||||||||| ||||||||| ||| ||||||||| || ||||||||    
T  46175902 ttggattgagcttatgaaaaataacttatgtaaataaataagcatttatttt 46175953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 577 - 650
Target Start/End: Complemental strand, 14987602 - 14987528
Alignment:
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||| | | ||||||||| ||||||||||| ||||||||||| || ||| | |||||||||| |||||    
T  14987602 aattttcgttagtgagaacttatgaattaatataaaaacttatttatttatataagctgtttttcataaactcaa 14987528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 591 - 647
Target Start/End: Original strand, 30956782 - 30956839
Alignment:
Q  591 aaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||||||||||| ||||| ||||| |||||||||||| | ||| |||||||||||||||    
T  30956782 aaaacttatgaattaatgtaaaaacttatttatttgcataagctatttttcataagct 30956839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 550 - 650
Target Start/End: Original strand, 31022457 - 31022558
Alignment:
Q  550 ttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctc 648  Q
    ||||||||  ||| |||| ||||||| ||||||||| | | ||||||||||| ||||  |||| ||||||||||||| | ||| | |||||||||| |||    
T  31022457 ttatgaaaaaacagcttataaagatacaattttcgtcagtgaaaacttatgaattaaggtaaatgcttatttatttgcataagttgtttttcataatctc 31022556  T
Q  649 aa 650  Q
    ||    
T  31022557 aa 31022558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 547 - 647
Target Start/End: Original strand, 35405738 - 35405838
Alignment:
Q  547 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 645  Q
    |||||||||||  ||| ||||  |||||| ||||||||||| ||| | || || | |||| ||||||||||||||||||| | ||| |||||||||||||    
T  35405738 agtttatgaaaaaacagcttatgaagatagaattttcgttagtaagacct-attaattaacataaaagcttatttatttgcataagctatttttcataag 35405836  T
Q  646 ct 647  Q
    ||    
T  35405837 ct 35405838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 578 - 650
Target Start/End: Complemental strand, 42617231 - 42617158
Alignment:
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||||||| | ||||||||| | |||| |||||| |||||||||||  | ||| ||||||||||||||||||    
T  42617231 attttcgttagtgaaaacttataaattaaaataaaaacttatttatttacataagctatttttcataagctcaa 42617158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 650
Target Start/End: Original strand, 47202902 - 47202983
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||| | | | ||||| | |||| ||||||||||| |||||| || ||| ||||||||||||||||||    
T  47202902 aagatacaattttcgttagtgagatcttataaattaaaataaaagcttacttatttatataagttatttttcataagctcaa 47202983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 1e-31; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 473 - 653
Target Start/End: Complemental strand, 9572891 - 9572709
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaa 571  Q
    ||||||||||||||||||||| | ||  || ||||||||| |||||| |||| ||||||| ||| |||||||  ||||||||||||  |||| |||  ||    
T  9572891 ttggattgagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaa 9572792  T
Q  572 gataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    |||||| |||| |||| | | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  9572791 gataaagtttttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 9572709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 726 - 815
Target Start/End: Original strand, 19227887 - 19227976
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 815  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  19227887 aagaagctaaaatggattatattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaaatacaagaa 19227976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 33766456 - 33766359
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||||||||| || |||||    
T  33766456 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgccaaaaccccagttaaaagagtcaattacaagagtgtcaaaa 33766359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 726 - 823
Target Start/End: Original strand, 51534478 - 51534575
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||    
T  51534478 aagaaactaaaatggattaaaataccgaaagcctggagatttcagcacaaggagtgccaaaacccctgctaaaagagtcaattacaagagtgccaaaa 51534575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 726 - 814
Target Start/End: Original strand, 4532087 - 4532175
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaaga 814  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  4532087 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgccaaaaccccaggtaaaagagtcaattacaaga 4532175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 473 - 653
Target Start/End: Complemental strand, 46689656 - 46689475
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    ||||||||||||||||||||| |  | ||| ||||||| | |||||||||| |||||||  ||||||||||  || ||||| | |  ||||||||  ||     
T  46689656 ttggattgagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaa 46689557  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||||||||||||||| | | ||||||||| ||||||||| || ||||||||||| | ||| |||||||||||||||||||||    
T  46689556 ataaaattttcgttagtgagaacttatgaattaatataatagtttatttatttgcataagttatttttcataagctcaatcc 46689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 726 - 806
Target Start/End: Complemental strand, 34549463 - 34549383
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 806  Q
    ||||| ||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34549463 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 34549383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 726 - 806
Target Start/End: Original strand, 45432374 - 45432454
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 806  Q
    ||||| ||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45432374 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 45432454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 478 - 626
Target Start/End: Original strand, 46473079 - 46473227
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| | ||  || ||||||||| |||||||||| |||||||  || || ||||  |||| |||||||  ||||||||  ||||||||    
T  46473079 ttgagcttatgcaaaacagcttgtgtaaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaacaacttatgaagataaa 46473178  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
     ||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  46473179 gttttcgttaataagaacttatgaattaatataaaatcttatttatttg 46473227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 478 - 650
Target Start/End: Original strand, 13038932 - 13039105
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||| ||||||||||   || ||| ||||||||| |||||||| | |||||||  ||||||||||  ||||||||||||  ||||||||  ||||||||    
T  13038932 ttgaggttatgcaaaacggctgatgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaa 13039031  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
     ||||||||| | | || |||||| |||||||||||| ||||||||||| | ||| ||||||||||||| ||||    
T  13039032 gttttcgttagtgagaagttatgaattaatataaaagtttatttatttgcataagctatttttcataagttcaa 13039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 733 - 809
Target Start/End: Complemental strand, 33936526 - 33936450
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaatta 809  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  33936526 taaaatggattatattactgaaagtctggagatttcaggacaaggagtgccaaaatcccagctgaaagagtcaatta 33936450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 504 - 650
Target Start/End: Original strand, 26988159 - 26988306
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||| |||||| ||||||||||||| |    
T  26988159 aaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatgaat 26988258  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||| ||||||||| ||||||||| | ||  ||||||||||||||||||    
T  26988259 taacataaaagctaatttatttgcataaactatttttcataagctcaa 26988306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 504 - 650
Target Start/End: Original strand, 28122627 - 28122776
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaata--aaaacttatga 601  Q
    ||||||||  |||||||||| |||||||  ||||| ||||  ||||||||||||  | |||||| ||||||||||||||||||| ||  ||||||| |||    
T  28122627 aaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgttagtaagaaaacttctga 28122726  T
Q  602 gttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
     |||||||||||||||||||||||  | ||  ||||||||||||||||||    
T  28122727 attaatataaaagcttatttattttcataaactatttttcataagctcaa 28122776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 481 - 626
Target Start/End: Original strand, 4068103 - 4068248
Alignment:
Q  481 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 580  Q
    ||||| ||||||||| ||  || ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  ||||||  |||    
T  4068103 agcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactatt 4068202  T
Q  581 ttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  4068203 ttcgttagtgagaacttatgaattaatataaaagtttatttatttg 4068248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 13182744 - 13182647
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    |||||| |||||| ||||||| ||||||||| ||||| ||||||| | ||||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  13182744 aagaaattaaaatagattaaaatactgaaagcctggaaatttcagtataaggagtgccaaaaccccaactaaaagagtcaattacaagaattccaaaa 13182647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 504 - 653
Target Start/End: Complemental strand, 36423056 - 36422906
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||||| ||||||| ||| |||||||  |||||||||||   ||||||||  ||||||||| |||||||| | | || |||| |      
T  36423056 aaataaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgagaagttataaaa 36422957  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||||||||||| ||||||||||| | ||| |||| |||||||| |||||||    
T  36422956 taatataaaagtttatttatttgcataagttattcttcataagatcaatcc 36422906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 505 - 649
Target Start/End: Complemental strand, 15515421 - 15515276
Alignment:
Q  505 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 604  Q
    |||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  | | ||||  |||||| ||||||||||| | | ||||||||| ||    
T  15515421 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaacttatgaatt 15515322  T
Q  605 aatataaaagcttatttattt-gtaaagatatttttcataagctca 649  Q
    || || |||||||||||||||  | ||| |||||||||||||||||    
T  15515321 aacatgaaagcttatttatttacttaagctatttttcataagctca 15515276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 526 - 650
Target Start/End: Original strand, 37712100 - 37712225
Alignment:
Q  526 tattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 625  Q
    |||||| |||||||| ||  ||||||||||||  ||||||||  |||||| || |||||||| ||| ||||||||| |||| ||||||| ||||||||||    
T  37712100 tattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttattt 37712199  T
Q  626 gta-aagatatttttcataagctcaa 650  Q
    | | ||| |||||||| |||||||||    
T  37712200 gcataagctatttttcgtaagctcaa 37712225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 626
Target Start/End: Complemental strand, 35282686 - 35282547
Alignment:
Q  487 tgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgtt 586  Q
    ||||||| | || ||| ||||||||| || ||||||| ||||| | || | ||||||  ||||||||||||  ||||||||  |||||||||||||  ||    
T  35282686 tgcaaaacagcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagataaaattttaatt 35282587  T
Q  587 aataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    | | ||||||||||| ||||||||||||  ||||||||||    
T  35282586 agtgaaaacttatgaattaatataaaagtctatttatttg 35282547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 37329487 - 37329340
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||  |||||||| | ||||||| || ||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||  | | ||||||| | |    
T  37329487 aaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaacttataaat 37329388  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  37329387 taacataaaagcttatttatttgcataagttatttttcataagctcaa 37329340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 480 - 626
Target Start/End: Original strand, 51162256 - 51162402
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    ||||||||||||| || || ||| ||||||||| || || || | ||||| ||||| |||||||  ||||||||||||  ||||||||  || ||| |||    
T  51162256 gagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaat 51162355  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    |||||||||||| | ||||| | |||| ||||||| ||| |||||||    
T  51162356 tttcgttaataagatcttataaattaacataaaagtttaattatttg 51162402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 480 - 628
Target Start/End: Original strand, 12256594 - 12256741
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    |||||||||||||| |||| ||| |||||| || |||||||| | ||||| | ||| ||||| |  ||||||||||||  |||| |||  ||| || |||    
T  12256594 gagcttatgcaaaacaacttatgtaaataattatgcttttatatattatttataagattgttgatgtagtttatgaaaa-acaatttatgaaggtacaat 12256692  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 628  Q
    |||||||| ||| ||||||||| |||| ||||||  |||||||||||||    
T  12256693 tttcgttagtaagaacttatgaattaaaataaaaatttatttatttgta 12256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 478 - 625
Target Start/End: Complemental strand, 26946206 - 26946058
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 576  Q
    ||||||||||||||||   || ||| ||||||||| |||||| || | ||||||| |||||||||||  ||||||||||||  ||||||||  ||||||     
T  26946206 ttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatac 26946107  T
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttattt 625  Q
    ||||||| ||| | | ||||| ||| ||| || |||||||| |||||||    
T  26946106 aattttccttagtgacaacttgtgaattagtacaaaagcttgtttattt 26946058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 504 - 647
Target Start/End: Original strand, 48819310 - 48819454
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||  ||||| || | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| | |||| |||| | | ||||||||| |    
T  48819310 aaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaacttatgaat 48819409  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||| ||||||||||||||||||| | ||| |||||||||||||||    
T  48819410 taacataaaagcttatttatttgcataagctatttttcataagct 48819454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 481 - 647
Target Start/End: Original strand, 10365159 - 10365325
Alignment:
Q  481 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 580  Q
    |||||||| ||||||| | ||| |||| ||||  ||||||| | ||||| | |||||||| ||| ||||||||||||  |||||  |  || ||| ||||    
T  10365159 agcttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatgaaaa-acaaccgatgaatatacaatt 10365257  T
Q  581 ttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||||||| ||||||||| | | |||| ||||||||||||| ||||| | ||| |||||||||||||||    
T  10365258 ttcgttagtaaaaacttttaaattaacataaaagcttattcatttgcataagctatttttcataagct 10365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 16889040 - 16888897
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||| ||| | | || |||||| |    
T  16889040 aaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatgact 16888942  T
Q  604 taatataaaagcttatttatttgtaaagatatttttcataagctcaa 650  Q
    ||| |||||||||||||||||||   | | |||||||||||||||||    
T  16888941 taacataaaagcttatttatttg--cataaatttttcataagctcaa 16888897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 480 - 587
Target Start/End: Original strand, 49971238 - 49971345
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    |||||||||||||| |||| ||| |||||||||  | ||||||| ||||| | |||||||||||  ||||||||||||  ||| ||||  |||||| |||    
T  49971238 gagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaat 49971337  T
Q  580 tttcgtta 587  Q
    ||||||||    
T  49971338 tttcgtta 49971345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 504 - 626
Target Start/End: Complemental strand, 6337831 - 6337709
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| ||||   | ||||||||| |    
T  6337831 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaacttatgaat 6337732  T
Q  604 taatataaaagcttatttatttg 626  Q
    ||| |||||||||||||| ||||    
T  6337731 taacataaaagcttatttgtttg 6337709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 577 - 645
Target Start/End: Complemental strand, 10850068 - 10849999
Alignment:
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 645  Q
    ||||||||||||| ||||||||| | |||| || |||||||||||||||||| ||| |||||||||||||    
T  10850068 aattttcgttaatgaaaacttataaattaacatgaaagcttatttatttgtataagttatttttcataag 10849999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 516 - 626
Target Start/End: Original strand, 12828145 - 12828257
Alignment:
Q  516 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaa--gataaaattttcgttaataaaaacttatgagttaatataaaa 613  Q
    |||||||| ||||||| ||  || ||||  ||||||||||||  |||||||| |||  |||||||||||||||||| |||||||||   |||||||||||    
T  12828145 ttttatttgttattcataaaatttttaaggtagtttatgaaaaaacaacttataaaaagataaaattttcgttaatgaaaacttatagattaatataaaa 12828244  T
Q  614 gcttatttatttg 626  Q
    | |||| ||||||    
T  12828245 gtttatctatttg 12828257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 473 - 626
Target Start/End: Original strand, 25485728 - 25485881
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    ||||||||| ||||| ||||| | || ||| |||||||||   |||||||| |||||||  | ||| ||||  ||||||||||||  |||| |||  |||    
T  25485728 ttggattgaacttatacaaaagagcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaag 25485827  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    |||||||||||| || | |||| |||| | |||||||||||  |||||||||||    
T  25485828 ataaaattttcgctagtgaaaatttataaattaatataaaaatttatttatttg 25485881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 626
Target Start/End: Complemental strand, 36259324 - 36259244
Alignment:
Q  546 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    ||||||||||||  |||  ||| ||| ||| ||||||||||||| || |||||| | ||||||||||||||||||||||||    
T  36259324 tagtttatgaaaaaacagtttataaacatacaattttcgttaatgaagacttataaattaatataaaagcttatttatttg 36259244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 608 - 650
Target Start/End: Complemental strand, 1565345 - 1565303
Alignment:
Q  608 ataaaagcttatttatttgtaaagatatttttcataagctcaa 650  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1565345 ataaaagcttatttatttgcaaagctatttttcataagctcaa 1565303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 484 - 650
Target Start/End: Complemental strand, 35897718 - 35897547
Alignment:
Q  484 ttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttat----gaaagtacaacttagaaagataaaat 579  Q
    |||||||||| |||| ||| ||||||||| | |||||||| ||||||| |||||| | ||| ||||||||    ||||  | |||||| || |||| |||    
T  35897718 ttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaaggaaaaaaaaacttataacgatacaat 35897619  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||| ||| | |||| |||| | |||| ||||||| ||||||||||  | ||| ||||||||||||| ||||    
T  35897618 tttcattagtgaaaatttataaattaacataaaagtttatttatttacataagctatttttcataagttcaa 35897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 650
Target Start/End: Original strand, 15791460 - 15791541
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||||| | | ||||| | |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  15791460 aagatacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagctatttttcataagctcaa 15791541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 490 - 626
Target Start/End: Original strand, 26542970 - 26543106
Alignment:
Q  490 aaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactt-agaaagataaaattttcgttaa 588  Q
    |||| |||| ||| ||||||||| |||||||| | ||||  | ||| |||||||  ||||||||||||  ||||||| |||||| || |||||||||||     
T  26542970 aaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaaag-tacaattttcgttag 26543068  T
Q  589 taaaaacttatgagttaatataaaagcttatttatttg 626  Q
    | ||||||||| |||||| || |||  |||||||||||    
T  26543069 tgaaaacttataagttaagattaaaatttatttatttg 26543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 504 - 624
Target Start/End: Complemental strand, 3069929 - 3069809
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    |||||| || ||||| || | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||||  || | | ||||||||| |    
T  3069929 aaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaacttatgaat 3069830  T
Q  604 taatataaaagcttatttatt 624  Q
    ||| |||||||||||||||||    
T  3069829 taacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 570 - 653
Target Start/End: Original strand, 19395851 - 19395935
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    |||||| ||||||||||| | ||| ||||| | |||| |||||| ||||||||| | || ||| |||||||||||||||||||||    
T  19395851 aagatacaattttcgttagtgaaagcttataaattaaaataaaaacttatttatatatataagctatttttcataagctcaatcc 19395935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 570 - 626
Target Start/End: Original strand, 50919564 - 50919620
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    |||||| |||||||||||||||||||| || | |||| || ||||||||||||||||    
T  50919564 aagatacaattttcgttaataaaaactaataaattaacatgaaagcttatttatttg 50919620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 801
Target Start/End: Complemental strand, 26676980 - 26676905
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaaga 801  Q
    |||||||||||||||| || ||||||||| |  || | ||||||||||||| | ||| |||| |||||||||||||    
T  26676980 aagaaactaaaatggaatatattactgaacgcatgaatatttcagcacaagaagtgctaaaaacccagctgaaaga 26676905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 732 - 799
Target Start/End: Original strand, 31911555 - 31911622
Alignment:
Q  732 ctaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 799  Q
    ||||||| || || ||||||||||| ||| ||||||||| ||||||| || |||||| ||||||||||    
T  31911555 ctaaaattgaatatattactgaaagcctgaagatttcagtacaaggagtgtcaaaacgccagctgaaa 31911622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 650
Target Start/End: Complemental strand, 41196773 - 41196638
Alignment:
Q  516 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 615  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| |||| | | | ||| ||| |||| ||||| ||    
T  41196773 ttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggc 41196674  T
Q  616 ttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||| | ||| |||||| |||||||||||    
T  41196673 ttatttatttgcataagctattttacataagctcaa 41196638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 577 - 650
Target Start/End: Original strand, 5347238 - 5347312
Alignment:
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||||| | |||||||   |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  5347238 aattttcgttaatcagaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctcaa 5347312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 593 - 627
Target Start/End: Original strand, 10082351 - 10082385
Alignment:
Q  593 aacttatgagttaatataaaagcttatttatttgt 627  Q
    ||||||||| |||||||||||||||||||||||||    
T  10082351 aacttatgaattaatataaaagcttatttatttgt 10082385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 650
Target Start/End: Complemental strand, 3116071 - 3115990
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||| ||| | ||||| | |||| ||||||||||| ||||||  | ||| ||||||||||||||||||    
T  3116071 aagatacaattttcgttagtaagatcttataaattaaaataaaagcttacttatttacataagttatttttcataagctcaa 3115990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 28756478 - 28756555
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 803  Q
    ||||| |||||||| | || ||||||||| | ||| ||||||||||||||||| ||| |||| | || ||||||||||    
T  28756478 aagaagctaaaatgaaatatattactgaatgcctgaagatttcagcacaaggagtgctaaaaactcaactgaaagagt 28756555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 1e-28; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 485 - 653
Target Start/End: Complemental strand, 32901242 - 32901073
Alignment:
Q  485 tatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcg 584  Q
    ||||||||| |||| ||| ||||||||| |||||||||| ||||||||||  ||||||| ||||||||| | |  ||||||||  |||||||||||||||    
T  32901242 tatgcaaaacaacttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcg 32901143  T
Q  585 ttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||| | | |||||||   ||||||||||| | |||||||||| | ||| |||||||||||||||||||||    
T  32901142 ttagtgagaacttatattttaatataaaaacatatttatttgcataagctatttttcataagctcaatcc 32901073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 43971922 - 43971775
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |  |||| |||  |||||||||||||||||| | | |||||||   |    
T  43971922 aaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaacttatattt 43971823  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||| ||||| | |||||||||| | ||| ||||||||||||||||||    
T  43971822 taatttaaaaacatatttatttgcataagttatttttcataagctcaa 43971775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 473 - 650
Target Start/End: Complemental strand, 3876369 - 3876191
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    ||||||||||||||| ||||| | || ||| ||||||||  |||||||||| ||||||| || || |||||  ||||||||||||  ||||||||  |||    
T  3876369 ttggattgagcttatacaaaacagcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaacaacttaagaag 3876270  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
     |||| |||| |||| |   ||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||    
T  3876269 gtaaagtttttgttagttctaacttatgaattaatataaaaacttatttatttgcataagctatttttcataagctcaa 3876191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 478 - 653
Target Start/End: Complemental strand, 33946643 - 33946475
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||||| || ||| ||||||||| |||||||||| |||||         |||||  || |||||||||   |||||||   |||||||    
T  33946643 ttgagcttatgcaaaatagcttatgcaaataaataagcttttatttattatta--------gttaaggtaatttatgaaaaaccaacttatgtagataaa 33946552  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    |||||||||||| | ||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  33946551 attttcgttaatgagaacttatgaattaatataaaagctcatttatttgcataagctatttttcataagctcaatcc 33946475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 478 - 646
Target Start/End: Complemental strand, 34707814 - 34707645
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| |||| | | ||||| ||| |||||||| | ||||||| |||||||||||  ||||||||||||  ||| || |  |||||| |    
T  34707814 ttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagataca 34707715  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagc 646  Q
    ||||||||||   | |||||| || |||| |||||| |||||||||||| | ||| ||||||||||||||    
T  34707714 attttcgttagcgagaacttacgaattaacataaaaacttatttatttgcttaagttatttttcataagc 34707645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 504 - 648
Target Start/End: Complemental strand, 43080009 - 43079864
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||| | | | ||||||||| |    
T  43080009 aaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaacttatgaat 43079910  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctc 648  Q
    |||  |||||||||||||||||| | ||| ||||||||||||||||    
T  43079909 taacttaaaagcttatttatttgaataagctatttttcataagctc 43079864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 478 - 650
Target Start/End: Original strand, 51409378 - 51409550
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||||||||| |||||| || ||| |||||||||  ||||||||| |||||||  || |||| ||  ||||||||||||  ||||||||  ||||||||    
T  51409378 ttgagcttatggaaaatagcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagataaa 51409477  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||| |  || | |||| |||||| ||||||||||| |||||||||||||| ||| || ||||||||| |||||    
T  51409478 atttccaatactgaaaaattatgaattaatataaaa-cttatttatttgtataagctacttttcataatctcaa 51409550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 40240652 - 40240505
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||| | |||||||| | ||||||| |||| |||  |  ||||||||||||  ||||||||  |||||| ||||||||||| | | | ||||||| |    
T  40240652 aaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgagagcttatgaat 40240553  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  40240552 taagataaaagcttatttatttgcataagctatttttcataagctcaa 40240505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 478 - 650
Target Start/End: Complemental strand, 22809295 - 22809121
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 576  Q
    ||||| |||||||||| | || ||| ||||||||| |||||| || | ||||||| |||||||| ||  ||||||||||||  ||  ||||  ||||||     
T  22809295 ttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatac 22809196  T
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||||||||| || ||||||||| |||| |||||| |||||||||||| | ||| | | ||||||||||||||    
T  22809195 aattttcgttaagaagaacttatgaattaacataaaaacttatttatttgcacaagctttatttcataagctcaa 22809121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 478 - 642
Target Start/End: Complemental strand, 40581178 - 40581012
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-aaagtacaacttagaaagataa 576  Q
    |||||||||||||||| |||| ||| ||||||||| |||||||| | ||||| | |||||||| ||  ||||||||| |||  ||| | ||  |||| |     
T  40581178 ttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaac 40581079  T
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcat 642  Q
    ||||||||||| | | ||||||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  40581078 aattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataagatatttttcat 40581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 481 - 621
Target Start/End: Complemental strand, 53218138 - 53217998
Alignment:
Q  481 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 580  Q
    ||||||||||||| |||| |||  |||||||| | |||||| | ||||||| |||||||| ||  ||||||||||||  |||||||   |||||| ||||    
T  53218138 agcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaatt 53218039  T
Q  581 ttcgttaataaaaacttatgagttaatataaaagcttattt 621  Q
    ||||||| | | ||||||| | |||| ||||||||||||||    
T  53218038 ttcgttagtgagaacttataaattaaaataaaagcttattt 53217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 569 - 653
Target Start/End: Original strand, 36266307 - 36266392
Alignment:
Q  569 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    |||||||  |||||||||||||||||||||| | |||| |||||| |||||||||||| | ||  |||||||||||||||||||||    
T  36266307 aaagatatgattttcgttaataaaaacttataaattaaaataaaaacttatttatttgcataaattatttttcataagctcaatcc 36266392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 504 - 650
Target Start/End: Original strand, 585031 - 585177
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| ||||||||   ||||||| |||||| || |  ||||||||||||  ||||||||  |||||| ||||||||||| |   |||||| || |    
T  585031 aaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtttgaacttaagaat 585130  T
Q  604 taatataaaagcttatttatttgtaaagatatttttcataagctcaa 650  Q
    ||| ||| ||||||||| ||||| | |  ||||||||||||||||||    
T  585131 taacatataagcttattgatttgaataactatttttcataagctcaa 585177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 577 - 653
Target Start/End: Original strand, 38524172 - 38524249
Alignment:
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||||||||||| ||| | ||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||    
T  38524172 aattttcgttagtaagatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagctcaatcc 38524249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 798
Target Start/End: Original strand, 50642392 - 50642457
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaa 798  Q
    ||||||| |||| ||||||||||  ||||||||||||||| ||||| |||| ||||||||||||||    
T  50642392 taaaatgaattatattactgaaaacctggagatttcagcataaggagtgccgaaaccccagctgaa 50642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 478 - 589
Target Start/End: Original strand, 29270346 - 29270457
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| |||| ||   |||||||| |||||||| | ||||||| |||||| | || ||| |||||||||  ||| ||||  |||||| |    
T  29270346 ttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagataca 29270445  T
Q  578 attttcgttaat 589  Q
    ||||||||||||    
T  29270446 attttcgttaat 29270457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 570 - 651
Target Start/End: Original strand, 25341347 - 25341429
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaat 651  Q
    ||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||  | ||| | |||||||||||||||||    
T  25341347 aagataaaattttcgttagggaaaacttgtgaattaatataaaaacttatttatttacataagctctttttcataagctcaat 25341429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 504 - 626
Target Start/End: Complemental strand, 42956254 - 42956132
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| | |||||| | ||||||| || |||||  || |||||||||| |  ||| |||| ||||||| ||||||||||| | | ||||||| | |    
T  42956254 aaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaacttataaat 42956155  T
Q  604 taatataaaagcttatttatttg 626  Q
    ||| |||||| ||||||||||||    
T  42956154 taacataaaaacttatttatttg 42956132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 504 - 626
Target Start/End: Complemental strand, 45331370 - 45331248
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    |||||||||  ||||||| | |||| || ||||||||||| | |||||||||||  ||| ||||  |||||| |||||||| ||  || ||| ||||| |    
T  45331370 aaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcgctagcaagaacatatgaat 45331271  T
Q  604 taatataaaagcttatttatttg 626  Q
    ||| ||||||| |||||||||||    
T  45331270 taacataaaagtttatttatttg 45331248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 589 - 653
Target Start/End: Original strand, 4974407 - 4974472
Alignment:
Q  589 taaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||||| ||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||    
T  4974407 taaaatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagctcaatcc 4974472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 480 - 557
Target Start/End: Original strand, 10448761 - 10448838
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 557  Q
    |||||||||||||| |||| ||| ||||||||| || ||||| | ||||| | |||||||||||  ||||||||||||    
T  10448761 gagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaa 10448838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 650
Target Start/End: Complemental strand, 17752140 - 17752059
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||||||| ||||||||||  | ||| ||||||||||||||||||    
T  17752140 aagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctcaa 17752059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 650
Target Start/End: Complemental strand, 19053460 - 19053379
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||||||| ||||||||||  | ||| ||||||||||||||||||    
T  19053460 aagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctcaa 19053379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 546 - 650
Target Start/End: Complemental strand, 20174973 - 20174868
Alignment:
Q  546 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 644  Q
    ||||||||||||  ||||||||  || ||| ||||||||||| ||| | ||||||| |||  ||||||||||||||||||| | ||| | ||||||||||    
T  20174973 tagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataa 20174874  T
Q  645 gctcaa 650  Q
     |||||    
T  20174873 cctcaa 20174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 577 - 653
Target Start/End: Original strand, 43376779 - 43376856
Alignment:
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    ||||||||  ||| ||||||||||| ||||||||||| |||||||| ||| | ||| | |||||||||||||||||||    
T  43376779 aattttcgcaaatgaaaacttatgaattaatataaaaacttatttagttgcataagctctttttcataagctcaatcc 43376856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 733 - 803
Target Start/End: Complemental strand, 20406473 - 20406403
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 803  Q
    ||||||| | || ||||||||| | ||| ||||||||||||||||| ||||||||  ||||||| ||||||    
T  20406473 taaaatgaaatatattactgaacgcctgaagatttcagcacaaggagtgccaaaaatccagctggaagagt 20406403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 580 - 626
Target Start/End: Original strand, 27769736 - 27769782
Alignment:
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    |||||||||| ||||||||| | |||| |||||||||||||||||||    
T  27769736 tttcgttaatgaaaacttataaattaacataaaagcttatttatttg 27769782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 546 - 650
Target Start/End: Complemental strand, 48597900 - 48597794
Alignment:
Q  546 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaactta-tgagttaatataaaagcttatttatttgtaaaga-tatttttcata 643  Q
    |||| |||||||  ||||||||  |||||| ||||||||| | | | |||||| ||| |||| ||||||||||||||||||| ||| | |||||||| ||    
T  48597900 tagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttgcaaacactatttttcgta 48597801  T
Q  644 agctcaa 650  Q
    |||||||    
T  48597800 agctcaa 48597794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 787
Target Start/End: Complemental strand, 15030167 - 15030106
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaa 787  Q
    |||| |||||||| || || ||||||||||| ||| |||||||||||||| || ||||||||    
T  15030167 aagagactaaaatagaatatattactgaaagcctgaagatttcagcacaaagagtgccaaaa 15030106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 533 - 626
Target Start/End: Complemental strand, 53787798 - 53787705
Alignment:
Q  533 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    |||||| |||| |||||||| ||||  |||  ||| ||||||| |||||| |||| | | ||||||||| |||| |||||| ||||||||||||    
T  53787798 aagctttttaatatagtttacgaaaaaacagtttataaagatataatttttgttattgagaacttatgaattaagataaaaacttatttatttg 53787705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 3e-26; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 726 - 819
Target Start/End: Complemental strand, 19021489 - 19021396
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgcc 819  Q
    |||||||||||||||||||||||| ||||||  |||||||||||| | ||||| |||||||||||||||| |||||||||||||||||| ||||    
T  19021489 aagaaactaaaatggattaaattattgaaagcttggagatttcagtataaggagtgccaaaaccccagctaaaagagtcaattacaagagtgcc 19021396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 726 - 822
Target Start/End: Complemental strand, 22639659 - 22639563
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 822  Q
    ||||||||||||||||||||| |||||||||  ||||||||||| |||||||| |||||||||||||| | ||||||||| |||||||| |||||||    
T  22639659 aagaaactaaaatggattaaaatactgaaagtttggagatttcatcacaaggagtgccaaaaccccagttaaaagagtcagttacaagagtgccaaa 22639563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 726 - 823
Target Start/End: Original strand, 39143220 - 39143317
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||| |||||||| |  |||| |||||||||||||||||| ||||||||    
T  39143220 aagaaactaaaatggattaaaataccgaaagcctggagatttcagcataaggagtgccaaaatcatagctaaaagagtcaattacaagagtgccaaaa 39143317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 504 - 642
Target Start/End: Complemental strand, 13625596 - 13625456
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatga-aagtacaacttagaaagataaaattttcgttaataaaaacttatgag 602  Q
    ||||||||| |||||||||| ||||||| ||||||||| |  |||||||||| ||  ||| |||| ||||||||||||||||||| | ||||||||| |     
T  13625596 aaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtgaaaacttataaa 13625497  T
Q  603 ttaatataaaagcttatttatttgta-aagatatttttcat 642  Q
    |||||||||||| ||||||||||| | ||| ||||||||||    
T  13625496 ttaatataaaagtttatttatttgcataagctatttttcat 13625456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 482 - 622
Target Start/End: Original strand, 42852011 - 42852150
Alignment:
Q  482 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 581  Q
    |||||||||||| | || ||  ||||||||| |||||||| | ||||||| |||||||| || |||||||||||||  |||||||| ||| ||| |||||    
T  42852011 gcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaacttataaa-atacaattt 42852109  T
Q  582 tcgttaataaaaacttatgagttaatataaaagcttattta 622  Q
    |||||| | | ||||||||| |||| |||||||||||||||    
T  42852110 tcgttagtgagaacttatgaattaacataaaagcttattta 42852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 504 - 650
Target Start/End: Complemental strand, 40152951 - 40152804
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| | |||||||| |||| || ||  ||||||| |||||||||||||  |||| |||  |||||||||||||||||  | | ||||||||| |    
T  40152951 aaataaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagataaaattttcgttcttgagaacttatgaat 40152852  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||| ||||    
T  40152851 taatataaaagattatttatttgcataagatgtttttcataagttcaa 40152804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 6537176 - 6537080
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 823  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||| ||||| |||||||| |  |||| |||||||||||||||| |||| |||||    
T  6537176 aagaaactaaaatggatgaaattactgaaactctggagatttcagcataaggagtgccaaaatctaagct-aaagagtcaattacaaaaatgtcaaaa 6537080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 478 - 626
Target Start/End: Complemental strand, 7364410 - 7364262
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||||||||| |||| | || ||| ||| ||||| |||| ||||| ||||||| |||||||||||  |||||||| ||   ||||||||  |||||| |    
T  7364410 ttgagcttatgtaaaacagctgatgcaaaaaaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagataca 7364311  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    || || |||| | | ||||||||| ||||||||||||||||||||||||    
T  7364310 atatttgttagtgagaacttatgaattaatataaaagcttatttatttg 7364262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 504 - 647
Target Start/End: Original strand, 28625491 - 28625635
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||  | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| | | ||| ||||| |    
T  28625491 aaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacctatgaat 28625590  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||| ||||||||||||||||||| | ||| |||||||||||||||    
T  28625591 taacataaaagcttatttatttgcataagttatttttcataagct 28625635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 504 - 647
Target Start/End: Original strand, 24030226 - 24030369
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||||| |||||||| ||| ||||||||||||  ||| |||   | |||| ||||||||||| | | ||||||||| |    
T  24030226 aaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaaca-cttgcgaggatacaattttcgttagtgagaacttatgaat 24030324  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||| ||||||||||||||||||| | ||| ||||||| |||||||    
T  24030325 taacataaaagcttatttatttgcataagctatttttaataagct 24030369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 484 - 626
Target Start/End: Complemental strand, 13060697 - 13060555
Alignment:
Q  484 ttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttc 583  Q
    ||||| |||| |||| ||| ||||||||| |||||||| | || |||| |||||||| ||  ||||||||||||  ||| ||||  ||| ||  ||||||    
T  13060697 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttc 13060598  T
Q  584 gttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    |||| | | ||||||||| |||| |||||||||||||||||||    
T  13060597 gttagtgagaacttatgaattaacataaaagcttatttatttg 13060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 533 - 650
Target Start/End: Original strand, 35536885 - 35537002
Alignment:
Q  533 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aag 631  Q
    |||||||| || |||||||||||||  ||| ||||  |||||| ||||||||||| | | |||||||||  ||||||||||||||||||||||| | |||    
T  35536885 aagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgagaacttatga-ataatataaaagcttatttatttgcataag 35536983  T
Q  632 atatttttcataagctcaa 650  Q
     |||||||||||| |||||    
T  35536984 ctatttttcataatctcaa 35537002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 478 - 650
Target Start/End: Complemental strand, 29922290 - 29922117
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| |  | ||| ||||||||| | |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||   | ||| |    
T  29922290 ttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgcatataca 29922191  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||  ||| | | | ||||||| |||||||||||||||||||||||| | ||| |||||||||||| |||||    
T  29922190 attttttttagtgagagcttatgaattaatataaaagcttatttatttgcataagctatttttcataaactcaa 29922117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 570 - 650
Target Start/End: Original strand, 40697083 - 40697164
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| |||||| |||  | ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  40697083 aagatacaatttttgttcctgaaaacttatgaattaacataaaagcttatttatttgtataagctatttttcataagctcaa 40697164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 505 - 648
Target Start/End: Complemental strand, 11912176 - 11912032
Alignment:
Q  505 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 604  Q
    |||||||| |||||||| | || |||| || ||||| ||| |||||| |||||  | | ||||  |||||| |||||| |||| | | ||||||||| ||    
T  11912176 aataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaacttatgaatt 11912077  T
Q  605 aatataaaagcttatttatttg-taaagatatttttcataagctc 648  Q
    || || |||||||||||||||| | ||||||||||||||||||||    
T  11912076 aacatgaaagcttatttatttgctcaagatatttttcataagctc 11912032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 733 - 792
Target Start/End: Complemental strand, 926818 - 926759
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaacccca 792  Q
    |||||||||||| ||||||||||   |||||||||||||||||||| |||||||||||||    
T  926818 taaaatggattatattactgaaaatttggagatttcagcacaaggagtgccaaaacccca 926759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 480 - 622
Target Start/End: Original strand, 43318990 - 43319132
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 579  Q
    |||||||||||||| |||| ||| ||||||||| |  ||||| | ||||| | |||||||||||  ||||||||||||  |||  |||  ||| || |||    
T  43318990 gagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataat 43319089  T
Q  580 tttcgttaataaaaacttatgagttaatataaaagcttattta 622  Q
    |||||||| | | ||||||||| |||| |||||| ||||||||    
T  43319090 tttcgttagtgagaacttatgaattaagataaaaacttattta 43319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 478 - 625
Target Start/End: Complemental strand, 2878777 - 2878631
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||| ||| | || ||| ||||||||| |||||||| | ||||||| ||| |||| ||  | ||||||||||  |||  |||||| |||| |    
T  2878777 ttgagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagtttagaa-gataca 2878679  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 625  Q
    ||||| |||| | ||||||| | | |||| ||||||||||||||||||    
T  2878678 atttttgttagtgaaaacttttaaattaacataaaagcttatttattt 2878631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 495 - 626
Target Start/End: Original strand, 17657244 - 17657375
Alignment:
Q  495 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 594  Q
    |||| ||| ||||||||| |||||||| | ||||||| |||||||  |   ||||||||||||  ||| ||||  ||||||  |||||||||| | | ||    
T  17657244 aacttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaa 17657343  T
Q  595 cttatgagttaatataaaagcttatttatttg 626  Q
    ||||||| |||| ||||||| |||||||||||    
T  17657344 cttatgaattaacataaaaggttatttatttg 17657375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 505 - 587
Target Start/End: Original strand, 1868858 - 1868940
Alignment:
Q  505 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgtta 587  Q
    |||||||| |||||||| | |||||||||||||||| ||  ||||||||||||   |||||||  |||||| |||||||||||    
T  1868858 aataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgtta 1868940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 478 - 556
Target Start/End: Complemental strand, 22202037 - 22201959
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaa 556  Q
    |||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||  |||||||||||    
T  22202037 ttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 22201959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 569 - 630
Target Start/End: Complemental strand, 11163292 - 11163231
Alignment:
Q  569 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgtaaa 630  Q
    ||||||| ||||||||||| |   ||||||||| |||| |||||||||||||||||||||||    
T  11163292 aaagatacaattttcgttagtgcgaacttatgaattaacataaaagcttatttatttgtaaa 11163231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 478 - 563
Target Start/End: Original strand, 17128263 - 17128348
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaa 563  Q
    |||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| || ||| | ||| |||||||||||| |||||    
T  17128263 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaatacaa 17128348  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 533 - 626
Target Start/End: Original strand, 28357181 - 28357274
Alignment:
Q  533 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    |||||||| ||  ||||||||||||  |||  |||  |||||| ||||||||||||  ||||||||| | |||| |||||||||||||||||||    
T  28357181 aagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttatttg 28357274  T

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Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 478 - 653
Target Start/End: Complemental strand, 1372094 - 1371921
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||||||||||| |  | ||| |||||||||| ||||||| | ||||| | |||||||| ||  | ||||||||||  |||  | |  |||||  |    
T  1372094 ttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttatgaaaa-acagttgatgaagattta 1371996  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    |||||||||||| | | ||||| | |||| |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  1371995 attttcgttaatgaga-cttataaattaacataaaa-cttatttatttgtataagttatttttcataagctcaatcc 1371921  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 477 - 557
Target Start/End: Complemental strand, 10537321 - 10537241
Alignment:
Q  477 attgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 557  Q
    |||||||||||| |||| | || ||| ||||||||| |||||||| | ||||| | |||||||| || |||||||||||||    
T  10537321 attgagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaa 10537241  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 525 - 625
Target Start/End: Original strand, 41419533 - 41419633
Alignment:
Q  525 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 624  Q
    ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| | | ||||||| | |||| |||||| ||||||||||    
T  41419533 ttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttatttatt 41419632  T
Q  625 t 625  Q
    |    
T  41419633 t 41419633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 596 - 650
Target Start/End: Original strand, 6125389 - 6125444
Alignment:
Q  596 ttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| |||||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  6125389 ttatgaattaatataaaagcttatttatttgcataagctatttttcataagttcaa 6125444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 650
Target Start/End: Original strand, 6144749 - 6144896
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||| ||| |||||||| ||  || |||||||||  | | ||||  || ||| |||||| ||||   | ||||||||| |    
T  6144749 aaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaacttatgaat 6144848  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||||||||||| |||||||| | ||  ||||||||||||||||||    
T  6144849 taatataaaagcttgtttatttgcataaactatttttcataagctcaa 6144896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 557
Target Start/End: Original strand, 11991294 - 11991369
Alignment:
Q  482 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 557  Q
    |||||||||||| |||| ||| ||||||||| |||||||| | ||||| | |||||||| || || ||||||||||    
T  11991294 gcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaa 11991369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 800
Target Start/End: Original strand, 22580397 - 22580464
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaag 800  Q
    ||||||||| || ||||||||||| ||  ||||||||| ||||| | || ||||||||||||||||||    
T  22580397 taaaatggaatatattactgaaagcctaaagatttcagtacaagaagtgtcaaaaccccagctgaaag 22580464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 624
Target Start/End: Original strand, 38498623 - 38498699
Alignment:
Q  546 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 624  Q
    ||||||||||||  |||| ||| ||||||| |||||| |||| | ||||||||| | |||| |||||||||||||||||    
T  38498623 tagtttatgaaa--acaatttataaagatataatttttgttagtgaaaacttataaattaaaataaaagcttatttatt 38498699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 650
Target Start/End: Complemental strand, 40452532 - 40452405
Alignment:
Q  525 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatttt-cgttaataaaaacttatgagttaatataaaagcttatttat 623  Q
    ||||||| |||||||| ||  |||||||||||   ||| ||||  |||||| |||||| ||||| | | ||||||||| | || |||| |||||||||||    
T  40452532 ttattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgagaacttatgaataaacataatagcttatttat 40452433  T
Q  624 ttgta-aagatatttttcataagctcaa 650  Q
    ||| | ||| ||||||||||||||||||    
T  40452432 ttgcataagctatttttcataagctcaa 40452405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 650
Target Start/End: Complemental strand, 41059860 - 41059717
Alignment:
Q  508 aaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaat 607  Q
    ||||| |||||||| | ||||||| |||||| | ||  | ||||||||||   || ||||  |||||  ||||||||||| | | ||||||||| ||||     
T  41059860 aaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaacttatgaattaac 41059761  T
Q  608 ataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||||||||||| | ||  | ||||||||||||||||    
T  41059760 ataaaagcttatttatttgcataaactgtttttcataagctcaa 41059717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 516 - 622
Target Start/End: Complemental strand, 23087842 - 23087736
Alignment:
Q  516 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 615  Q
    |||||| | ||||| | ||||||||||| |||||||||||||  |||||| |  ||| || |||||| |||| | | ||||||||| ||||||||||| |    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgagaacttatgaattaatataaaaac 23087743  T
Q  616 ttattta 622  Q
    | |||||    
T  23087742 taattta 23087736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 799
Target Start/End: Original strand, 26368935 - 26369008
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 799  Q
    ||||| |||||||||| || ||||||||| | ||| | ||||||||||||| | ||| |||| |||||||||||    
T  26368935 aagaagctaaaatggaatatattactgaacgcctgaatatttcagcacaagaagtgctaaaaacccagctgaaa 26369008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 1e-25; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 473 - 647
Target Start/End: Original strand, 6758607 - 6758783
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    ||||||||||||||||||||| |||| ||| ||||||||| |||||| ||| |||| || |||||||||||  ||||||||||||    ||||||  |||    
T  6758607 ttggattgagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaag 6758706  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatat-aaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||| || |||||||| | | ||||||||| ||||||| ||||||||||||||||| | ||| ||||||||| |||||    
T  6758707 atacaaatttcgttagtgagaacttatgaattaatataaaaagcttatttatttgcataagctatttttcagaagct 6758783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 478 - 653
Target Start/End: Original strand, 23239232 - 23239408
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||||||||| ||||||||| ||  ||||||||| |||||||||| ||||||| |||||||||||  | |||||| |||   ||| |||  | |||| |    
T  23239232 ttgagcttatgaaaaataacttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatgacgataca 23239331  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 653  Q
    | |||| ||| | | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  23239332 actttccttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 23239408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 726 - 806
Target Start/End: Original strand, 12912248 - 12912328
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 806  Q
    ||||| ||||||||||||| |||||| |||| ||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  12912248 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgtcaaaaccccagatgaaagagtcaa 12912328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 727 - 815
Target Start/End: Complemental strand, 24394009 - 24393921
Alignment:
Q  727 agaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 815  Q
    |||| ||||||| ||||| |||||| |||| || |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  24394009 agaagctaaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccttagctgaaagagtcaattacaagaa 24393921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 476 - 650
Target Start/End: Complemental strand, 29623580 - 29623406
Alignment:
Q  476 gattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagata 575  Q
    |||||||||||||||||| |||| ||| |||||||||  ||||||||| ||||| |  || |||||||  ||||||||||||  ||||||||  || |||    
T  29623580 gattgagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaata 29623481  T
Q  576 aaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    || ||||||||| | | ||||||||| |||| || ||| |||||||||||| | ||| |||||||||||| |||||    
T  29623480 aagttttcgttagtgagaacttatgaattaacat-aaatcttatttatttgcataagctatttttcataaactcaa 29623406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 495 - 649
Target Start/End: Complemental strand, 32675973 - 32675818
Alignment:
Q  495 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 594  Q
    |||| ||| ||||||||| |||||||||| ||||||| ||||||  |||  | ||||||||||  | ||||||  |||||| ||||||| ||| | | ||    
T  32675973 aacttatgcaaataaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaa 32675874  T
Q  595 cttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctca 649  Q
    ||||||| ||||||||||| |||||||||||| | ||| |||||||||||||||||    
T  32675873 cttatgaattaatataaaaacttatttatttgcataagttatttttcataagctca 32675818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 473 - 652
Target Start/End: Complemental strand, 2040292 - 2040107
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-----aaagtacaactta 567  Q
    ||||||||||||||||||||| |||| ||  ||||||||| |||||||||| ||||||| ||| |||||||  || ||||||     |||  |||| |||    
T  2040292 ttggattgagcttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgttaaggtaatttatgaagaaaaaaaacaattta 2040193  T
Q  568 gaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatc 652  Q
     |||| || ||||||| ||| | | ||||||| | ||||||||||| |||||||||||| | ||| |||||||||| |||||||||    
T  2040192 taaagttacaattttcattagttagaacttataaattaatataaaaacttatttatttgcataagttatttttcatgagctcaatc 2040107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 478 - 646
Target Start/End: Complemental strand, 21891439 - 21891270
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||||||||||| |||| || ||| ||||||||| | ||| || | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |    
T  21891439 ttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaagataga 21891340  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagc 646  Q
    |||||||||   || ||||||||| |||| ||||||||||||| ||| | | ||| ||||||||||||||    
T  21891339 attttcgttcgcaagaacttatgaattaacataaaagcttattcattcgcataagctatttttcataagc 21891270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 727 - 806
Target Start/End: Complemental strand, 165610 - 165531
Alignment:
Q  727 agaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 806  Q
    |||||||||||||||||| |||| | |||| || |||||||||||||||| | || ||||||||||||||||||||||||    
T  165610 agaaactaaaatggattatattattaaaagtcttgagatttcagcacaagaagtgtcaaaaccccagctgaaagagtcaa 165531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 478 - 613
Target Start/End: Complemental strand, 3830020 - 3829885
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||||||||| ||||   || ||| |||||||||||||||||||| ||||||| ||  || |||   ||||||||||||  ||||||||  ||||||||    
T  3830020 ttgagcttatgaaaaacggcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataaa 3829921  T
Q  578 attttcgttaataaaaacttatgagttaatataaaa 613  Q
    ||||| |||||||| ||||||||| |||| ||||||    
T  3829920 atttttgttaataagaacttatgaattaacataaaa 3829885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 815
Target Start/End: Original strand, 18972621 - 18972703
Alignment:
Q  733 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 815  Q
    |||||| ||||| |||||| |||| || |||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||    
T  18972621 taaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccttagctgaaagagacaattacaagaa 18972703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 504 - 648
Target Start/End: Complemental strand, 2034304 - 2034159
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| |||||||| | ||||| | ||| |||| ||  ||||||||||||  ||||||||  |||||| ||||||||| | ||| ||||||||| |    
T  2034304 aaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgtaagtaataacttatgatt 2034205  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagctc 648  Q
     || ||||||||||||||||||| | ||| ||||| ||||||||||    
T  2034204 caacataaaagcttatttatttgcataagctatttatcataagctc 2034159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 478 - 626
Target Start/End: Original strand, 10873971 - 10874117
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    ||||| |||||||||||| || ||| | ||||||| |||||||| ||  ||| | |||||||||||  |||||||||| |  ||| ||||  |||||| |    
T  10873971 ttgagattatgcaaaatagcttatgcatataaataagcttttatatt--attaataagcttgttaaggtagtttatgagaaaacagcttatgaagataca 10874068  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    ||||| |||  | ||||||||||| |||| |||||||||||||||||||    
T  10874069 attttagttggtgaaaacttatgaattaacataaaagcttatttatttg 10874117  T

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Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 477 - 625
Target Start/End: Original strand, 2255718 - 2255866
Alignment:
Q  477 attgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 576  Q
    |||||||||||||||||  ||| ||| ||||||||  |||||||| | | ||||| |||||||||||  || |||||||||  ||| ||||  ||||||     
T  2255718 attgagcttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatac 2255817  T
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttattt 625  Q
    |||||| | || | | ||| ||||| |||| ||||||||||||||||||    
T  2255818 aatttttggtagtgagaacatatgaattaacataaaagcttatttattt 2255866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 546 - 653
Target Start/End: Complemental strand, 10184363 - 10184255
Alignment:
Q  546 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 644  Q
    ||||||||||||  |||| |||  |||| | ||||||||||| ||| | ||||| | |||| |||||||||||||||||| || ||| ||||||||||||    
T  10184363 tagtttatgaaaaaacaatttatgaagaaacaattttcgttagtaagagcttataaattaaaataaaagcttatttatttatataagctatttttcataa 10184264  T
Q  645 gctcaatcc 653  Q
    |||||||||    
T  10184263 gctcaatcc 10184255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 726 - 799
Target Start/End: Complemental strand, 6029429 - 6029356
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 799  Q
    ||||| |||||||||| || ||||||||||  ||| ||||||||||||||||| |||||||| ||||| |||||    
T  6029429 aagaagctaaaatggaatatattactgaaaatctgaagatttcagcacaaggagtgccaaaatcccagttgaaa 6029356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 596 - 652
Target Start/End: Original strand, 6752915 - 6752972
Alignment:
Q  596 ttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatc 652  Q
    |||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  6752915 ttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatc 6752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 647
Target Start/End: Complemental strand, 2027251 - 2027107
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 603  Q
    ||||||||| ||||||||   ||||||| ||| |||| || | |||||||||||  ||| ||||  |||||| || ||| |||| ||| ||||||||| |    
T  2027251 aaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagtaagaacttatgaat 2027152  T
Q  604 taatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||| ||||||| |||| |||||| | ||| |||||||||||||||    
T  2027151 taacataaaagtttatctatttgcataagctatttttcataagct 2027107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 525 - 628
Target Start/End: Complemental strand, 7576915 - 7576812
Alignment:
Q  525 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 624  Q
    ||||||| ||||||||||| ||| ||||| |||  |||  |||  |||||| |||||||||| |||| ||||||| | |||| |||||| ||||||||||    
T  7576915 ttattcataagcttgttaacataatttataaaaaaacagtttatgaagatataattttcgttgataagaacttattaattaacataaaaacttatttatt 7576816  T
Q  625 tgta 628  Q
    ||||    
T  7576815 tgta 7576812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 577 - 650
Target Start/End: Complemental strand, 10755285 - 10755211
Alignment:
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||| ||| ||||||||| |||| ||||||||||||||||||| | ||  ||||||||| ||||||||    
T  10755285 aattttcgttagtaagaacttatgaattaacataaaagcttatttatttgcataaactatttttcagaagctcaa 10755211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 650
Target Start/End: Complemental strand, 9764400 - 9764319
Alignment:
Q  570 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||| ||||||||||||| || |||||| | |||| ||||||||||||||||||| | ||  ||||||||||||| ||||    
T  9764400 aagatacaattttcgttaatgaacacttataaattaacataaaagcttatttatttgcataaattatttttcataagttcaa 9764319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 504 - 557
Target Start/End: Original strand, 24625862 - 24625915
Alignment:
Q  504 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 557  Q
    |||||||||||||||||| | ||||||| |||||||||||  ||||||||||||    
T  24625862 aaataaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaa 24625915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 577 - 644
Target Start/End: Complemental strand, 10730210 - 10730142
Alignment:
Q  577 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 644  Q
    |||||| |||||||| ||||||||| |||| |||||| |||||||||||||| |||  |||||||||||    
T  10730210 aatttttgttaataagaacttatgaattaagataaaaacttatttatttgtataagtcatttttcataa 10730142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 567
Target Start/End: Original strand, 6632646 - 6632733
Alignment:
Q  480 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 567  Q
    |||||||| ||||| |||| ||| ||||||||| |||||||| | ||||| | || ||||||||  ||||||||||||  ||||||||    
T  6632646 gagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaactta 6632733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 650
Target Start/End: Complemental strand, 23239275 - 23239232
Alignment:
Q  608 ataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  23239275 ataaaagcttatttatttgtataagttatttttcataagctcaa 23239232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 647
Target Start/End: Complemental strand, 35071414 - 35071359
Alignment:
Q  593 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||||||||| |||| ||||||||||||||||||| | ||| |||||||||||||||    
T  35071414 aacttatgaattaacataaaagcttatttatttgcataagctatttttcataagct 35071359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 7734077 - 7734153
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 803  Q
    |||||||||||||| | || ||||||| | | ||| | ||||||||||||| | ||| ||||||||||||||||||||    
T  7734077 aagaaactaaaatgaaatatattactgca-gcctgtaaatttcagcacaagtagtgcaaaaaccccagctgaaagagt 7734153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 478 - 626
Target Start/End: Original strand, 10687292 - 10687443
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttat---tttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagat 574  Q
    |||||||||| ||||| | || ||| ||||||||| ||||| ||   |||||||||| |||| | ||||  ||||||||| ||  ||||||||   ||||    
T  10687292 ttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatggagat 10687391  T
Q  575 aaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 626  Q
    | |||||||||||   | |||||||||  | | |||||||||||||||||||    
T  10687392 acaattttcgttagcgagaacttatgaactgacataaaagcttatttatttg 10687443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 726 - 822
Target Start/End: Complemental strand, 9677 - 9581
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 822  Q
    ||||||||||||||||||||| |||| |||| ||| ||||||||||||||| | || ||||| ||||||| ||||||||| |||||||| |||||||    
T  9677 aagaaactaaaatggattaaaatactaaaagcctgaagatttcagcacaagaagtgtcaaaatcccagctaaaagagtcagttacaagagtgccaaa 9581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 726 - 806
Target Start/End: Complemental strand, 94980 - 94900
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 806  Q
    ||||| ||||||||||||| |||| | |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  94980 aagaagctaaaatggattatattattaaaagcctggagatttcagcacaaggagtgccaaaatcccagctgaaagagtcaa 94900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 726 - 806
Target Start/End: Complemental strand, 1077 - 997
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 806  Q
    ||||| ||||||||||||| |||||  |||| ||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  1077 aagaagctaaaatggattatattacaaaaagtctggagatttcagcataaggagtgacaaaaccccagctgaaagagtcaa 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 473 - 647
Target Start/End: Original strand, 1038 - 1213
Alignment:
Q  473 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 572  Q
    |||||||  |||||| ||||| |||| ||| ||||||||| |||||||||| |||| || ||| |||||||  || |||||| ||  | ||||||  |||    
T  1038 ttggattaggcttatacaaaacaacttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaag 1137  T
Q  573 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 647  Q
    ||| || |||| ||| | | |||||||   |||||||||||||||||||||||| | ||| |||||||||||||||    
T  1138 atacaaatttcattagtgagaacttatactttaatataaaagcttatttatttgcataagttatttttcataagct 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 726 - 811
Target Start/End: Complemental strand, 23894 - 23809
Alignment:
Q  726 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattaca 811  Q
    ||||| ||||||| ||||| |||||| |||| || |||||||||||||||||| ||||||||||  || |||||||| ||||||||    
T  23894 aagaagctaaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccgtagttgaaagagacaattaca 23809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 481 - 650
Target Start/End: Original strand, 24733 - 24905
Alignment:
Q  481 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaa--tagtttatgaaagtacaacttagaaagataaaa 578  Q
    |||||| |||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||||  ||||||||||||  ||| || |  |||||| ||    
T  24733 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 24832  T
Q  579 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    | ||| ||| | | ||||||| | |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  24833 tattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaa 24905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 478 - 650
Target Start/End: Complemental strand, 24489 - 24317
Alignment:
Q  478 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 577  Q
    |||||||| | ||||| | || ||| ||||||||| |||| ||| | ||||||| |||||||| ||  ||||| || |||  ||||||||  |||||| |    
T  24489 ttgagcttctacaaaacagcttatgcaaataaata-gcttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacgaagatata 24391  T
Q  578 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 650  Q
    |||||||||| ||||||||| ||| |||  |||||||| |||||||||| | ||  || |||||||||||||||    
T  24390 attttcgttagtaaaaacttgtgaattatcataaaagcctatttatttgcataaactacttttcataagctcaa 24317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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