View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0740_high_102 (Length: 262)

Name: NF0740_high_102
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0740_high_102
NF0740_high_102
[»] chr6 (23 HSPs)
chr6 (30-262)||(17557164-17557396)
chr6 (30-126)||(33538517-33538613)
chr6 (30-126)||(19854158-19854254)
chr6 (53-123)||(25651243-25651313)
chr6 (30-126)||(22361913-22362009)
chr6 (30-126)||(18629756-18629855)
chr6 (33-121)||(34966875-34966963)
chr6 (30-125)||(18381831-18381926)
chr6 (43-121)||(29160464-29160542)
chr6 (53-125)||(25919617-25919689)
chr6 (30-121)||(18398946-18399037)
chr6 (51-126)||(29605453-29605528)
chr6 (53-121)||(33324701-33324769)
chr6 (53-121)||(35136183-35136251)
chr6 (75-126)||(17083371-17083422)
chr6 (45-114)||(22462259-22462328)
chr6 (43-119)||(18086992-18087068)
chr6 (54-125)||(21623172-21623243)
chr6 (30-121)||(25367385-25367476)
chr6 (43-113)||(16231909-16231979)
chr6 (53-123)||(16300160-16300230)
chr6 (49-123)||(19629337-19629410)
chr6 (80-121)||(32352071-32352112)
[»] scaffold0080 (2 HSPs)
scaffold0080 (30-126)||(43946-44042)
scaffold0080 (30-126)||(23820-23916)
[»] chr4 (26 HSPs)
chr4 (30-126)||(7964859-7964955)
chr4 (30-126)||(15013430-15013526)
chr4 (30-126)||(18276437-18276533)
chr4 (30-126)||(7185992-7186088)
chr4 (30-126)||(15044831-15044927)
chr4 (30-126)||(41256517-41256613)
chr4 (30-126)||(52265656-52265752)
chr4 (30-121)||(18238305-18238396)
chr4 (43-126)||(38764712-38764795)
chr4 (30-126)||(15109497-15109593)
chr4 (30-126)||(40905082-40905177)
chr4 (33-121)||(54398391-54398479)
chr4 (30-121)||(41916874-41916965)
chr4 (33-121)||(50220091-50220179)
chr4 (45-121)||(13590237-13590313)
chr4 (53-125)||(19821947-19822019)
chr4 (30-126)||(14901235-14901331)
chr4 (53-125)||(41166117-41166189)
chr4 (30-126)||(13442824-13442923)
chr4 (80-125)||(47535244-47535289)
chr4 (43-113)||(7132234-7132304)
chr4 (53-103)||(13809681-13809731)
chr4 (50-123)||(14996134-14996206)
chr4 (50-123)||(19697549-19697621)
chr4 (50-123)||(19708134-19708206)
chr4 (53-125)||(34395261-34395333)
[»] scaffold0342 (1 HSPs)
scaffold0342 (30-126)||(5943-6039)
[»] scaffold0009 (1 HSPs)
scaffold0009 (30-126)||(69460-69556)
[»] chr8 (31 HSPs)
chr8 (30-126)||(5854617-5854713)
chr8 (30-126)||(26011497-26011593)
chr8 (30-126)||(27233215-27233311)
chr8 (50-126)||(33611221-33611297)
chr8 (30-126)||(18261619-18261715)
chr8 (30-126)||(33528429-33528524)
chr8 (53-126)||(15933301-15933374)
chr8 (30-126)||(45465274-45465370)
chr8 (30-125)||(38635796-38635891)
chr8 (30-121)||(45559085-45559176)
chr8 (53-126)||(23226247-23226320)
chr8 (53-125)||(23837202-23837274)
chr8 (43-126)||(37653777-37653858)
chr8 (30-125)||(21198300-21198395)
chr8 (53-126)||(23152004-23152077)
chr8 (33-121)||(18041683-18041771)
chr8 (30-126)||(23149784-23149880)
chr8 (33-121)||(24552721-24552809)
chr8 (30-90)||(29306456-29306516)
chr8 (30-121)||(33172236-33172327)
chr8 (30-125)||(38533653-38533748)
chr8 (32-121)||(22735988-22736077)
chr8 (53-125)||(31194495-31194567)
chr8 (49-123)||(18612413-18612486)
chr8 (49-123)||(18619318-18619391)
chr8 (54-123)||(3431461-3431530)
chr8 (45-121)||(22497372-22497448)
chr8 (43-113)||(13721097-13721167)
chr8 (53-123)||(22886333-22886403)
chr8 (81-126)||(23158166-23158211)
chr8 (30-121)||(19331462-19331554)
[»] chr7 (32 HSPs)
chr7 (30-126)||(34241336-34241432)
chr7 (53-126)||(48356647-48356720)
chr7 (43-123)||(14272047-14272127)
chr7 (30-126)||(20583702-20583798)
chr7 (53-126)||(16915099-16915172)
chr7 (30-126)||(28390315-28390411)
chr7 (53-126)||(9611311-9611383)
chr7 (53-126)||(9838883-9838955)
chr7 (30-126)||(4484730-4484826)
chr7 (30-126)||(13377532-13377628)
chr7 (33-121)||(17947743-17947831)
chr7 (30-126)||(31501176-31501272)
chr7 (45-121)||(46474009-46474085)
chr7 (30-126)||(13448975-13449071)
chr7 (50-126)||(38424222-38424298)
chr7 (30-121)||(9321184-9321275)
chr7 (45-121)||(9723970-9724046)
chr7 (30-114)||(13863078-13863162)
chr7 (45-114)||(45149617-45149686)
chr7 (30-126)||(15358800-15358896)
chr7 (30-90)||(16919598-16919658)
chr7 (53-125)||(17224109-17224181)
chr7 (51-126)||(25124133-25124208)
chr7 (30-125)||(14935367-14935459)
chr7 (30-125)||(15362960-15363052)
chr7 (43-119)||(18980190-18980266)
chr7 (53-125)||(49047845-49047917)
chr7 (54-123)||(371095-371164)
chr7 (30-126)||(4446215-4446311)
chr7 (53-102)||(13274814-13274863)
chr7 (53-125)||(26070435-26070507)
chr7 (53-125)||(26094222-26094294)
[»] scaffold0387 (1 HSPs)
scaffold0387 (42-126)||(1106-1190)
[»] scaffold0010 (1 HSPs)
scaffold0010 (30-126)||(31023-31119)
[»] chr5 (24 HSPs)
chr5 (30-126)||(29917968-29918064)
chr5 (30-126)||(6456627-6456723)
chr5 (30-126)||(21222756-21222852)
chr5 (30-126)||(21617019-21617115)
chr5 (53-125)||(23981687-23981759)
chr5 (30-126)||(37983367-37983463)
chr5 (30-126)||(19862212-19862308)
chr5 (30-126)||(23493922-23494018)
chr5 (45-121)||(19873852-19873928)
chr5 (33-121)||(21109758-21109846)
chr5 (30-126)||(24084080-24084176)
chr5 (43-121)||(23234646-23234724)
chr5 (53-126)||(432466-432539)
chr5 (33-117)||(26559966-26560050)
chr5 (30-121)||(7728428-7728519)
chr5 (54-123)||(9730563-9730632)
chr5 (30-126)||(5450991-5451087)
chr5 (43-103)||(22885668-22885728)
chr5 (53-126)||(3673865-3673938)
chr5 (45-121)||(16835462-16835538)
chr5 (53-123)||(7528906-7528976)
chr5 (43-113)||(10778139-10778209)
chr5 (45-114)||(23417256-23417325)
chr5 (53-125)||(1168375-1168447)
[»] chr3 (30 HSPs)
chr3 (30-126)||(11061154-11061250)
chr3 (50-126)||(12952967-12953043)
chr3 (54-126)||(34559902-34559974)
chr3 (30-125)||(17191545-17191640)
chr3 (44-126)||(6228787-6228869)
chr3 (30-126)||(41661568-41661664)
chr3 (43-126)||(4162366-4162449)
chr3 (30-125)||(3576586-3576681)
chr3 (30-125)||(17204704-17204799)
chr3 (50-121)||(31412501-31412572)
chr3 (30-126)||(14814913-14815009)
chr3 (30-126)||(50313190-50313286)
chr3 (53-124)||(12488897-12488968)
chr3 (34-126)||(1990805-1990898)
chr3 (53-126)||(9590925-9590998)
chr3 (30-126)||(33369056-33369152)
chr3 (55-125)||(47784920-47784990)
chr3 (53-126)||(38811179-38811252)
chr3 (53-126)||(39656529-39656602)
chr3 (51-126)||(51961306-51961381)
chr3 (53-123)||(16934153-16934223)
chr3 (33-121)||(43427667-43427753)
chr3 (53-125)||(11329132-11329204)
chr3 (53-125)||(14080513-14080585)
chr3 (53-125)||(17139512-17139584)
chr3 (30-125)||(15876072-15876167)
chr3 (53-123)||(11477370-11477440)
chr3 (43-113)||(18911010-18911080)
chr3 (53-121)||(14284969-14285037)
chr3 (53-125)||(14295442-14295514)
[»] chr2 (19 HSPs)
chr2 (30-126)||(24884689-24884785)
chr2 (43-125)||(19433493-19433575)
chr2 (53-126)||(67995-68068)
chr2 (53-126)||(23821776-23821849)
chr2 (53-126)||(23830855-23830928)
chr2 (33-121)||(6094724-6094812)
chr2 (50-126)||(22138163-22138239)
chr2 (30-126)||(24277764-24277860)
chr2 (30-121)||(9636753-9636844)
chr2 (53-123)||(3412-3482)
chr2 (43-125)||(43645897-43645979)
chr2 (53-126)||(19666531-19666604)
chr2 (53-125)||(24294694-24294766)
chr2 (53-121)||(19669280-19669348)
chr2 (53-125)||(25305449-25305521)
chr2 (45-114)||(24560894-24560963)
chr2 (30-125)||(33128046-33128144)
chr2 (53-123)||(28031418-28031488)
chr2 (53-125)||(28974053-28974125)
[»] chr1 (19 HSPs)
chr1 (30-126)||(21195017-21195113)
chr1 (30-126)||(37234008-37234104)
chr1 (43-125)||(41229100-41229182)
chr1 (53-126)||(17608931-17609004)
chr1 (30-126)||(8538058-8538154)
chr1 (30-126)||(8603297-8603393)
chr1 (53-126)||(22143532-22143605)
chr1 (33-121)||(33397360-33397448)
chr1 (53-125)||(36356464-36356536)
chr1 (33-121)||(5768320-5768408)
chr1 (53-125)||(13377011-13377083)
chr1 (43-120)||(49997442-49997520)
chr1 (53-125)||(20177179-20177251)
chr1 (33-121)||(40436420-40436508)
chr1 (45-114)||(20194059-20194128)
chr1 (43-119)||(17148578-17148654)
chr1 (30-121)||(52400639-52400730)
chr1 (53-123)||(21650219-21650289)
chr1 (53-125)||(51627835-51627907)
[»] scaffold0447 (2 HSPs)
scaffold0447 (31-126)||(4566-4661)
scaffold0447 (31-126)||(9180-9275)
[»] scaffold0004 (2 HSPs)
scaffold0004 (31-126)||(86360-86455)
scaffold0004 (30-126)||(27500-27596)
[»] scaffold0700 (1 HSPs)
scaffold0700 (53-126)||(2528-2601)
[»] scaffold0162 (2 HSPs)
scaffold0162 (32-121)||(7175-7264)
scaffold0162 (53-123)||(11752-11821)
[»] scaffold0077 (1 HSPs)
scaffold0077 (30-126)||(6547-6643)
[»] scaffold0103 (1 HSPs)
scaffold0103 (53-126)||(33665-33738)
[»] scaffold0034 (2 HSPs)
scaffold0034 (57-126)||(40661-40730)
scaffold0034 (57-126)||(46168-46237)
[»] scaffold0016 (1 HSPs)
scaffold0016 (56-125)||(116687-116756)
[»] scaffold0670 (1 HSPs)
scaffold0670 (33-121)||(7826-7914)
[»] scaffold0598 (1 HSPs)
scaffold0598 (30-126)||(3255-3350)
[»] scaffold0383 (1 HSPs)
scaffold0383 (31-126)||(7174-7270)
[»] scaffold0006 (1 HSPs)
scaffold0006 (30-126)||(197401-197497)
[»] scaffold0148 (1 HSPs)
scaffold0148 (43-126)||(37561-37644)
[»] scaffold0032 (1 HSPs)
scaffold0032 (51-126)||(104791-104866)
[»] scaffold0389 (1 HSPs)
scaffold0389 (53-126)||(10665-10738)
[»] scaffold0390 (3 HSPs)
scaffold0390 (50-126)||(16009-16085)
scaffold0390 (50-126)||(3025-3101)
scaffold0390 (60-126)||(5185-5251)
[»] scaffold0367 (1 HSPs)
scaffold0367 (30-125)||(17469-17567)
[»] scaffold0053 (1 HSPs)
scaffold0053 (53-125)||(77018-77090)
[»] scaffold0150 (1 HSPs)
scaffold0150 (53-124)||(28541-28612)
[»] scaffold0025 (2 HSPs)
scaffold0025 (30-125)||(85537-85632)
scaffold0025 (30-126)||(53350-53445)
[»] scaffold0020 (1 HSPs)
scaffold0020 (30-121)||(108018-108109)
[»] scaffold0786 (2 HSPs)
scaffold0786 (50-126)||(4492-4568)
scaffold0786 (60-126)||(1597-1663)
[»] scaffold0253 (2 HSPs)
scaffold0253 (30-126)||(7405-7501)
scaffold0253 (30-126)||(16830-16926)
[»] scaffold0028 (1 HSPs)
scaffold0028 (53-121)||(79547-79615)
[»] scaffold0023 (1 HSPs)
scaffold0023 (30-125)||(61382-61480)
[»] scaffold0013 (1 HSPs)
scaffold0013 (53-125)||(35482-35554)
[»] scaffold0151 (1 HSPs)
scaffold0151 (43-126)||(22583-22666)
[»] scaffold0970 (1 HSPs)
scaffold0970 (53-114)||(2470-2531)
[»] scaffold0521 (1 HSPs)
scaffold0521 (53-126)||(11097-11170)
[»] scaffold0165 (2 HSPs)
scaffold0165 (30-103)||(29990-30063)
scaffold0165 (30-90)||(22038-22098)
[»] scaffold0031 (1 HSPs)
scaffold0031 (53-126)||(97369-97442)
[»] scaffold1272 (1 HSPs)
scaffold1272 (53-125)||(313-385)
[»] scaffold0193 (1 HSPs)
scaffold0193 (30-126)||(4608-4704)
[»] scaffold0153 (1 HSPs)
scaffold0153 (30-126)||(1838-1933)
[»] scaffold0075 (1 HSPs)
scaffold0075 (53-125)||(4945-5017)
[»] scaffold0022 (2 HSPs)
scaffold0022 (30-126)||(131839-131935)
scaffold0022 (55-103)||(109616-109664)
[»] scaffold0561 (1 HSPs)
scaffold0561 (59-121)||(2952-3014)
[»] scaffold0029 (1 HSPs)
scaffold0029 (53-123)||(50027-50097)
[»] scaffold0243 (1 HSPs)
scaffold0243 (53-126)||(2487-2560)
[»] scaffold0123 (1 HSPs)
scaffold0123 (53-121)||(8018-8086)
[»] scaffold0058 (1 HSPs)
scaffold0058 (53-121)||(70477-70545)
[»] scaffold0003 (1 HSPs)
scaffold0003 (70-126)||(147556-147612)
[»] scaffold0065 (1 HSPs)
scaffold0065 (58-121)||(68058-68121)
[»] scaffold0026 (1 HSPs)
scaffold0026 (75-126)||(90037-90088)
[»] scaffold0173 (1 HSPs)
scaffold0173 (49-123)||(5228-5301)
[»] scaffold0480 (1 HSPs)
scaffold0480 (53-102)||(9053-9102)
[»] scaffold0456 (2 HSPs)
scaffold0456 (77-126)||(1742-1791)
scaffold0456 (77-126)||(8887-8936)
[»] scaffold0396 (1 HSPs)
scaffold0396 (53-106)||(11879-11932)
[»] scaffold0049 (1 HSPs)
scaffold0049 (49-114)||(33581-33646)
[»] scaffold0017 (1 HSPs)
scaffold0017 (45-114)||(12780-12849)
[»] scaffold0483 (1 HSPs)
scaffold0483 (53-125)||(6665-6737)
[»] scaffold0090 (1 HSPs)
scaffold0090 (80-124)||(3321-3365)


Alignment Details
Target: chr6 (Bit Score: 181; Significance: 7e-98; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 30 - 262
Target Start/End: Original strand, 17557164 - 17557396
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttgagaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || | ||  |||||||||||||||||||| ||||    
T  17557164 gaattgtgattataatcatatttaattgatgttgttgttgctaactaatattgttgttaatcattcatagtttaggtgttcataaatcatgatttaagaa 17557263  T
Q  130 gggttgagagagaacatgtgaacgatgctttccgttggtgatgaagagaaaatgcatgggctgaaaactaatacagagaagagggaacgatgaatgagaa 229  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  17557264 ggattgagagagaacatgtgaacgatgctttccattggtgatgaagagaaaatgcatgggctgaaaactaatatagagaagagggaaccatgaatgagaa 17557363  T
Q  230 gggttgggagagaacatgtgactagcacatgtc 262  Q
    ||||||||||| |||||||||||||||||||||    
T  17557364 gggttgggagaaaacatgtgactagcacatgtc 17557396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 33538517 - 33538613
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||| ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  33538517 gaattgtgatgagaatcatgtttaattgatgttgttattgctaagtgatattgttgttgatgattcatggcttgagtgttcataaatcatgatttga 33538613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 19854254 - 19854158
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| ||||||||||||||||||||||||  ||||||||||||||| ||| || ||||| ||||||||||||||||| ||||    
T  19854254 gaattgtgatgagaatcatgtttaattgatgttgttgttgctaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgaattga 19854158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 25651313 - 25651243
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  25651313 aattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatt 25651243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 22361913 - 22362009
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||| |||||| ||||    
T  22361913 gaattgtgatgaaattcatgttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataattcatgaattga 22362009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 18629756 - 18629855
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgtt---gttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||   ||||||| ||| |||||||||||||||| ||| |||| ||| ||||||||||||||||||||||    
T  18629756 gaattgtgatgagaatcatgtttaattgatgttgttgttgttgttaagtgatattgttgttgatgattcatggtttgggtgttcataaatcatgatttga 18629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 34966963 - 34966875
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| |||||||||||||||||    
T  34966963 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatga 34966875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 18381831 - 18381926
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||| ||||||||||| ||| |||||||| || ||||||| ||||||||||    
T  18381831 gaattgtgataagagtcatgttcaattgatgttgttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgatttg 18381926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 29160464 - 29160542
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| || ||||||||||||||    
T  29160464 aatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtattcataaatcatga 29160542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 25919689 - 25919617
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||  |||| ||||||||||| ||| |||||||| || ||||||| ||||||||||    
T  25919689 aattgatgttgttgttgctatatgatgttgttgttgatgattcatggcttgggtattcataattcatgatttg 25919617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 18399037 - 18398946
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||| |||||| |||| ||| |||||||| |||| ||||| ||||||    
T  18399037 gaattgtgatgagattcatgttcaattgatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtgtgcataattcatga 18398946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 29605528 - 29605453
Alignment:
Q  51 ttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||||||||||||   |||||||||||||| ||| |||| ||| |||| |||||||||||| ||||    
T  29605528 ttaattgatgttgttgttgctaagaaatattgttgttgatgattcatggtttgggtgtgcataaatcatgaattga 29605453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 33324769 - 33324701
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||||||||| ||||||| |||| ||||||||||| ||| |||||||| || ||||||| ||||||    
T  33324769 aattgatgttgttattgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatga 33324701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 35136183 - 35136251
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||||||||| ||||||| |||| ||||||||||| ||| |||||||| || ||||||| ||||||    
T  35136183 aattgatgttgttattgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatga 35136251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 17083371 - 17083422
Alignment:
Q  75 tgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||| ||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  17083371 tgatgttgttgttgatgattcatggcttgggtgttcataaatcatgatttga 17083422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 22462259 - 22462328
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataa 114  Q
    |||| ||||| |||||||||||||| |||  ||||||||||||||| ||| || ||||| ||||||||||    
T  22462259 tcatgtttaaatgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataa 22462328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 18086992 - 18087068
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcat 119  Q
    |||||||| |||||||||||||||||||| |   || |||||| | || |||||||||||| ||||||||| |||||    
T  18086992 aatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatatatcat 18087068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 21623243 - 21623172
Alignment:
Q  54 attgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||||||||||||| |||| ||| |||| || | | |||||||| || ||||||| ||||||||||    
T  21623243 attgatgttgttgttgctaagtgatgttgatgttaatgagtcatggcttgggtattcataattcatgatttg 21623172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 25367385 - 25367476
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||| ||||| | ||| ||| |||||||| |||| ||| | ||||||    
T  25367385 gaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatgttgttatcgataattcatggcttgggtgtgcatgattcatga 25367476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 16231979 - 16231909
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcata 113  Q
    |||||||| |||||||||||||||||||| |   || |||||| | || |||||||||||| |||||||||    
T  16231979 aatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 16231909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 16300160 - 16300230
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||| |   || |||||||  || |||||||||||| ||||||||| |||||||||    
T  16300160 aattgatgttgttgttgctgagatatgttgttgtatatgatttatggcttgggtgttcatatatcatgatt 16300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 19629410 - 19629337
Alignment:
Q  49 atttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||||||| |   || |||||||| || | |||||||||| ||||||||| |||||||||    
T  19629410 atttaattgatgttgttgttgctgagacatgttgttgtttatga-ttatggcttgggtgttcatatatcatgatt 19629337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 32352112 - 32352071
Alignment:
Q  80 ttgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||||||| |||  |||||||||||||||||||||||||    
T  32352112 ttgttgttgatgattcttggcttgagtgttcataaatcatga 32352071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 43946 - 44042
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  43946 gaattatgatgagaatcatgtttaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 44042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 23820 - 23916
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| ||||||||| |||||||||| |||   |||||||||||||| ||| |||||||| |||||| || ||||| ||||||    
T  23820 gaattgtgatgagaatcatgtttaattgacgttgttgttgttaaggaatattgttgttgatgattcatggcttgtgtgttcgtatatcataatttga 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 7964859 - 7964955
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| |||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7964859 gaattatgatgagaatcatgtttaattgattttgttgttgctaagtgatattgttgttgatgattcatggcttgagtgttcataaatcatgatttga 7964955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 15013430 - 15013526
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||| ||||||||| |||  ||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  15013430 gaattgtgatgagaatcatgtttaattgatattgttgttgttaagagatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 15013526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 18276533 - 18276437
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || |||||||||||||||||| || |||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  18276533 gaattgtgatgagattcatgttcaattgatgttgttgttgcaaagtgatattgttgttgatgattgatggcttgggtgttcataaatcatgatttga 18276437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 7185992 - 7186088
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| ||||||||||||||||||||||||  |||||| |||||||| ||| |||||||| ||||| ||||||||||||||||    
T  7185992 gaattgtgatgagattcatgtttaattgatgttgttgttgctaagagatattattgttgatgattcatggcttgggtgtttataaatcatgatttga 7186088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 15044927 - 15044831
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||| |||||| |||| ||| |||||||| ||||||||||||||||||||||    
T  15044927 gaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgttcataaatcatgatttga 15044831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 41256517 - 41256613
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | || ||| |||||||||||||||||||| |||  ||||||||||||||| ||| |||| ||| ||||||||||||||||||||||    
T  41256517 gaattgtgatgagaaccatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatggtttgggtgttcataaatcatgatttga 41256613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 52265656 - 52265752
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||||||| ||||||| ||| |||||||| |||||||||| |||||||||||    
T  52265656 gaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatattgatgttgatgattcatggcttgggtgttcataattcatgatttga 52265752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 18238305 - 18238396
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| |||||||||||||||||    
T  18238305 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatga 18238396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 38764795 - 38764712
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||| |||||||||||||||||||| |||   |||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  38764795 aatcatgtttaattgatgttgttgttgttaaggaatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 38764712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 15109497 - 15109593
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| | || |||||| |||| ||| |||||||| ||||||||||||||||||||||    
T  15109497 gaattgtgataagattcatgttcaattgatgttgttgttgctaagtaatgttgttgatgatgattcatggcttgggtgttcataaatcatgatttga 15109593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 40905082 - 40905177
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| || |||||||||||||||||||||  ||||||||||||||| | |  ||||||| ||||||||||||||||||||||    
T  40905082 gaattgtgatgagaatcatgtt-aattgatgttgttgttgctaagagatattgttgttgatgactcgtggcttgggtgttcataaatcatgatttga 40905177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 54398479 - 54398391
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| |||||||| ||||| |||||||||||    
T  54398479 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatggcttgggtgtttataaatcatga 54398391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 41916874 - 41916965
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | |||||| ||||| |||||||||||||| |||  ||||||||||||||| ||| || ||||||||||||| |||||||||    
T  41916874 gaattgtgatgagaatcatgtttaactgatgttgttgttgttaagagatattgttgttgatgattcattgcttgagtgttcaaaaatcatga 41916965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 50220091 - 50220179
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || | ||| |||||||||||||||||    
T  50220091 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagtttgggtgttcataaatcatga 50220179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 13590237 - 13590313
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||| |||||||||||||||||||| |||  |||||| |||||||| ||| || ||||| |||||||||||||||||    
T  13590237 tcatgtttaattgatgttgttgttgttaagagatattattgttgatgattcatagcttgggtgttcataaatcatga 13590313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 19821947 - 19822019
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||  |||| ||||||||||| ||| |||||||| || ||||||| ||||||||||    
T  19821947 aattgatgttgttgttgctatgtgatgttgttgttgatgattcatggcttgggtattcataattcatgatttg 19822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 14901331 - 14901235
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||| | | ||||||||| ||||||||||||||||||||| ||||  |||||||||| ||| ||| | || |||| ||||| |||||| ||||    
T  14901331 gaattgtggtaagaatcatattcaattgatgttgttgttgctaagtgatgctgttgttgatgattcatgacatgggtgtgcataattcatgaattga 14901235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 41166117 - 41166189
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| ||||||||||| | | |||||||| || ||||||| | ||||||||    
T  41166117 aattgatgttgttgttgctaagtgatgttgttgttgatgaatcatggcttgggtattcataacttatgatttg 41166189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 13442824 - 13442923
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgtt---gttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||   ||||||| |||  ||| ||||||||||| ||| || ||||| |||||||||||| |||| ||||    
T  13442824 gaattgtgatgagaatcatgtttaattgatgttgttgttgttgttaagagattttgttgttgatgattcatagcttgggtgttcataaattatgaattga 13442923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 47535244 - 47535289
Alignment:
Q  80 ttgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  47535244 ttgttgttgatgattcatggcttgagtgttcataattcatgatttg 47535289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 7132234 - 7132304
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcata 113  Q
    |||||||| |||||||||||||||||||| |   || |||||| | || |||||||||||| |||||||||    
T  7132234 aatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 7132304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 13809681 - 13809731
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttg 103  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| ||||||||    
T  13809681 aattgatgttgttgttgctaattgatgttgttgatgataattcatggcttg 13809731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 14996206 - 14996134
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    |||||||||||||||||||||| |   || |||||||| || | |||||||||| ||||||||| |||||||||    
T  14996206 tttaattgatgttgttgttgctgagacatgttgttgtttatga-ttatggcttgggtgttcatatatcatgatt 14996134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 19697549 - 19697621
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    |||||||||||||||||||||| |   || |||||||| || | |||||||||| ||||||||| |||||||||    
T  19697549 tttaattgatgttgttgttgctgagacatgttgttgtttatga-ttatggcttgggtgttcatatatcatgatt 19697621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 19708134 - 19708206
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    |||||||||||||||||||||| |   || |||||||| || | |||||||||| ||||||||| |||||||||    
T  19708134 tttaattgatgttgttgttgctgagacatgttgttgtttatga-ttatggcttgggtgttcatatatcatgatt 19708206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 34395333 - 34395261
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||  | || |||||| |||| ||| ||||||||||| | ||| | ||||||||||    
T  34395333 aattgatgttgttgttgctatgtcatgttgttgatgataattcatggcttgagtttgcatgattcatgatttg 34395261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 6039 - 5943
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| ||| |||| || ||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||  ||||||||||    
T  6039 gaattgtgataatattcatgttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgagtgttcataatccatgatttga 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 69556 - 69460
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  69556 gaattgtgatgagattcatgttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 69460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 5854713 - 5854617
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  5854713 gaattgtgatgagattcatgttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 5854617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 26011593 - 26011497
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  26011593 gaattgtgatgagattcatgttgaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 26011497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 27233215 - 27233311
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  27233215 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 27233311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 33611221 - 33611297
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  33611221 tttaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgtgtgttcataaatcatgatttga 33611297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 18261619 - 18261715
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| ||||||||||||||||| ||||    
T  18261619 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgagttga 18261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 33528524 - 33528429
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| ||||||||||||||||||||||||  |||||| |||||||| ||| |||||||| ||||||||||||||||||||||    
T  33528524 gaattgtgatgagattcatgtttaattgatgttgttgttgctaagagatatt-ttgttgatgattcatggcttgggtgttcataaatcatgatttga 33528429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 15933374 - 15933301
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||||| |||||  |||||||||||||||    
T  15933374 aattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgtttgtaaatcatgatttga 15933301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 45465274 - 45465370
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || | ||| ||||||||||||||||| ||||    
T  45465274 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagtttgggtgttcataaatcatgaattga 45465370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 38635796 - 38635891
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||| |||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| |||||||| |||||||| |||||| |||||    
T  38635796 gaattatgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatggcttgggtgttcatgaatcataatttg 38635891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 45559085 - 45559176
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| ||| |||||||||||||    
T  45559085 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagggatattgttgttgatgattcatagcttgggtggtcataaatcatga 45559176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 23226247 - 23226320
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||| ||| |||||||||||||||| ||| |||||||| || ||||||| |||||||||||    
T  23226247 aattgatgttgttgttgttaagtgatattgttgttgatgattcatggcttgggtattcataattcatgatttga 23226320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 23837274 - 23837202
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| ||||||||||| ||| |||||||| || ||||||| ||||||||||    
T  23837274 aattgatgttgttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgatttg 23837202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 37653777 - 37653858
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||| |||||||||||||||||||| |||   |||||||||||||| |||||||||||| ||||||||  ||||||||||||    
T  37653777 aatcatgtttaattgatgttgttgttgttaaggaatattgttgttgatgatttatggcttgggtgttcat--atcatgatttga 37653858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 21198300 - 21198395
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||| | | |||||| || ||||||||||||||||||||| |||| ||| |||| || ||| |||||||| |||||||||| ||||||||||    
T  21198300 gaattgtggtaagaatcatgttcaattgatgttgttgttgctaagtgatgttgctgttaatgattcatggcttgggtgttcataattcatgatttg 21198395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 23152004 - 23152077
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||| |||||||||||  |||||||||||||||| ||| |||||||| |||||||||| |||||| ||||    
T  23152004 aattgatgctgttgttgctatgtgatattgttgttgatgattcatggcttgggtgttcataattcatgaattga 23152077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 18041683 - 18041771
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||   |||||||||||||| ||| || ||||  |||||||||||||||||    
T  18041683 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagatatattgttgttgatgattcatagcttaggtgttcataaatcatga 18041771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 23149880 - 23149784
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| || ||| | |||| |||||||||| |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||    
T  23149880 gaattatgatgagaatcatgttcaatagttgtttttgttgctaagtgatgttgttgttgatgattcatggcttgagtattcataattcatgatttga 23149784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 24552721 - 24552809
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||  ||||| ||||||||| |||||  ||||||||||| || ||||||||    
T  24552721 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagagatatggttgttgatgatttagagcttgagtgttaatgaatcatga 24552809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 29306516 - 29306456
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgat 90  Q
    |||||||||| | | |||| |||||||||||||||||||||||| ||||||||||||||||    
T  29306516 gaattgtgatgagattcatgtttaattgatgttgttgttgctaagtgatattgttgttgat 29306456  T

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Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 33172327 - 33172236
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | |||||| |||||||||||||||||||   ||  ||||| ||||||||| ||| || ||||| |||||||||||||||||    
T  33172327 gaattgtgatgagaatcatgtttaattgatgttgttgttataaagagatatggttgttgatgattcatagcttgcgtgttcataaatcatga 33172236  T

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Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 38533748 - 38533653
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||| | | |||| || ||||||||||||||||||||  |||| |||||| |||| ||| |||||||| |||| ||||| ||||||||||    
T  38533748 gaattgtgatgagattcatgttcaattgatgttgttgttgctaggtgatgttgttgatgataattcatggcttgggtgtgcataattcatgatttg 38533653  T

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Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 22735988 - 22736077
Alignment:
Q  32 attgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||| | | |||| || ||||||||||||| |||||||||||| ||||||||| | ||| |||||||| |||| ||||| ||||||    
T  22735988 attgtgataagattcatgttcaattgatgttgttcttgctaactgatgttgttgttgttaattcatggcttgggtgtgcataattcatga 22736077  T

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Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 31194495 - 31194567
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||||||||||||||| ||| || ||||| |||  ||| | ||||||||||    
T  31194495 aattgatgttgttgttgctaaatgatattgttgttgatgattcatagcttgggtgcacatgattcatgatttg 31194567  T

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Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 18612486 - 18612413
Alignment:
Q  49 atttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||||||| |   || |||||||| || ||| |||||||||||||||||| |||||||||    
T  18612486 atttaattgatgttgttgttgctgagacatgttgttgtttatgatt-atggcttgagtgttcatatatcatgatt 18612413  T

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Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 18619391 - 18619318
Alignment:
Q  49 atttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||||||| |   || |||||||| || ||| |||||||||||||||||| |||||||||    
T  18619391 atttaattgatgttgttgttgctgagacatgttgttgtttatgatt-atggcttgagtgttcatatatcatgatt 18619318  T

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Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 3431461 - 3431530
Alignment:
Q  54 attgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    |||||||||||||||||| |   || |||||||| || |||||||||||| ||||||||| |||||||||    
T  3431461 attgatgttgttgttgctgagacatgttgttgtttatgatttatggcttgggtgttcatatatcatgatt 3431530  T

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Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 22497372 - 22497448
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||| |||||||||||||||||||| |||  | |||||||||| || ||| || | ||| |||||||||||||||||    
T  22497372 tcatgtttaattgatgttgttgttgataagaggtattgttgttaatgattcatagtttgggtgttcataaatcatga 22497448  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 13721097 - 13721167
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcata 113  Q
    |||||||| |||||||||||||||||||| |   || |||||| | || |||||||||||| |||||||||    
T  13721097 aatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 13721167  T

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Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 22886403 - 22886333
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||| |   || |||||||| || ||||||| |||| ||||||||| |||||||||    
T  22886403 aattgatgttgttgttgctgagatatgttgttgtttatgatttatgacttgggtgttcatatatcatgatt 22886333  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 23158211 - 23158166
Alignment:
Q  81 tgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| ||| |||||||| |||||||||| |||||||||||    
T  23158211 tgttgttgatgattcatggcttgggtgttcataattcatgatttga 23158166  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 19331462 - 19331554
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattg-ttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | |||||| |||||||||||||||||||  | |  ||||||| |||||||| ||| || ||||  |||||||| ||||||||    
T  19331462 gaattgtgatgagaatcatgtttaattgatgttgttgttattgagagatattgtttgttgatgattcatagcttaggtgttcatgaatcatga 19331554  T

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Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 34241336 - 34241432
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| |||||||||||||||||||| ||| ||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  34241336 gaattatgatgagaatcatgtttaattgatgttgttgttgataagtgacattgttgttgatgattcatggcttgagtgttcataaatcatgatttga 34241432  T

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Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 48356720 - 48356647
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  48356720 aattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 48356647  T

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Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 14272047 - 14272127
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  14272047 aatcatgttcaattgatgttgttgttgctaaatgatattgttgttgatgattcatggcttgagtgttcataattcatgatt 14272127  T

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Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 20583702 - 20583798
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  20583702 gaattatgatgagaatcatgtttaattgatgttgttgttgttaagggatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 20583798  T

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Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 16915099 - 16915172
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| | |||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  16915099 aattgatgttgttgttgctaagtcatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 16915172  T

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Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 28390411 - 28390315
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| |||||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || | ||| ||||||||||||||||| ||||    
T  28390411 gaattgtgatgataatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagtttgggtgttcataaatcatgaattga 28390315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 9611383 - 9611311
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||| |||| ||||||||||||||||||||||    
T  9611383 aattgatgttgttgttgctaagtgatattgttgttgatgattcatgacttg-gtgttcataaatcatgatttga 9611311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 9838955 - 9838883
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||| |||| ||||||||||||||||||||||    
T  9838955 aattgatgttgttgttgctaagtgatattgttgttgatgattcatgacttg-gtgttcataaatcatgatttga 9838883  T

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Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 4484826 - 4484730
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| || ||||| |||||||||||||    
T  4484826 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtattcatgaatcatgatttga 4484730  T

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Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 13377628 - 13377532
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| | || |||||| |||| ||| |||||||| ||||||||||||||||||||||    
T  13377628 gaattgtgataagattcatgttcaattgatgttgttgttgctaagtaatgttgttgatgatgattcatggcttgggtgttcataaatcatgatttga 13377532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 17947743 - 17947831
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| |||||||||||||||||    
T  17947743 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatga 17947831  T

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Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 31501272 - 31501176
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| ||   ||||||||||||||| ||| |||||||| |||||||| | |||||||||||    
T  31501272 gaattgtgatgagaatcatgtttaattgatgttgttgttgttatgagatattgttgttgatgattcatggcttgggtgttcatgagtcatgatttga 31501176  T

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Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 46474085 - 46474009
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||| |||||||||||||||||||| |||  ||||||||||||||| ||| || |||||||||||||||||||||||    
T  46474085 tcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgagtgttcataaatcatga 46474009  T

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Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 13448975 - 13449071
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| |||  | ||||| ||||| ||||||||||| ||||    
T  13448975 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcgtagcttgggtgttgataaatcatgaattga 13449071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 38424298 - 38424222
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||||||||||||| |||  ||||||||||||||| ||| ||| |||| ||||||||||||||||||||||    
T  38424298 tttaagtgatgttgttgttgttaagagatattgttgttgatgattcatgacttgggtgttcataaatcatgatttga 38424222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 9321184 - 9321275
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | ||| ||||||||||||||||||||||| |||  |||||||||||| || ||| || ||||| ||||||| |||||||||    
T  9321184 gaattgtgatgagaattatatttaattgatgttgttgttgataatagatattgttgttaatgattcatagcttgggtgttcacaaatcatga 9321275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 9723970 - 9724046
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||| |||||||||||||||||||| |||  |||||| |||||||| ||| || ||||| |||||||||||||||||    
T  9723970 tcatgtttaattgatgttgttgttgttaagagatattattgttgatgattcatagcttgggtgttcataaatcatga 9724046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 13863078 - 13863162
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataa 114  Q
    |||||||||| ||| |||| || ||||| ||||||||||||||| ||||||||||||| || ||  |||||||| ||||||||||    
T  13863078 gaattgtgataatattcatgttcaattgttgttgttgttgctaagtgatattgttgttaatgatgcatggcttgggtgttcataa 13863162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 45149686 - 45149617
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataa 114  Q
    |||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| ||||||||||    
T  45149686 tcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataa 45149617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 15358896 - 15358800
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||   |||||| |||||||||||||||||||| |||    | ||||||||||| ||| |||||||| ||||||||| |||| |||||||    
T  15358896 gaattgtgatgggaatcatgtttaattgatgttgttgttgttaagaagttttgttgttgatgattcatggcttgggtgttcatatatcaagatttga 15358800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 16919658 - 16919598
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgat 90  Q
    |||||||||| | |||| | |||||||||||||||||||||||| | ||||||||||||||    
T  16919658 gaattgtgataagaatcgtgtttaattgatgttgttgttgctaagtaatattgttgttgat 16919598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 17224109 - 17224181
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| |||||  |||| ||| |||||||| || ||||||| ||||||||||    
T  17224109 aattgatgttgttgttgctaagtgatgttgttaatgatgattcatggcttgggtattcataattcatgatttg 17224181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 25124208 - 25124133
Alignment:
Q  51 ttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||| ||   ||| ||||||||||| ||| ||||| || ||||||| ||||||||||||||    
T  25124208 ttaattgatgttgttgttgatatgagatgttgttgttgatgattcatggcatgggtgttcacaaatcatgatttga 25124133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 14935459 - 14935367
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||| |||| | |||||| ||||| |||||||||||||   ||  ||||||||||||||  ||| |||| ||| |||||||||||||||||||||    
T  14935459 gaattatgatgagaatcatttttaaatgatgttgttgtt---aagagatattgttgttgaagattcatggtttgggtgttcataaatcatgatttg 14935367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 15363052 - 15362960
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||| |||| | |||||| ||||| |||||||||||||   ||  ||||||||||||||  ||| |||| ||| |||||||||||||||||||||    
T  15363052 gaattatgatgagaatcatttttaaatgatgttgttgtt---aagagatattgttgttgaagattcatggtttgggtgttcataaatcatgatttg 15362960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 18980190 - 18980266
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcat 119  Q
    |||||||| |||||||||||||||||||| |   || |||||| | || |||||||||||| ||||||||| |||||    
T  18980190 aatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatatatcat 18980266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 49047845 - 49047917
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| |||||||| || | ||| | ||||||||||    
T  49047845 aattgatgttgttgttgctaagtgatgttgttgctgataattcatggcttgggtatgcatgattcatgatttg 49047917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 371164 - 371095
Alignment:
Q  54 attgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    |||||||||||||||||  |   || |||||||| || |||||||||||| ||||||||| |||||||||    
T  371164 attgatgttgttgttgccgagacatgttgttgtttatgatttatggcttgggtgttcatatatcatgatt 371095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 4446311 - 4446215
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttga-tcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| || ||||||||||||||||| |||  |||  || |||||| | ||| |||||||| ||||||||||||||||| ||||    
T  4446311 gaattgtgatgagaatcatgtt-aattgatgttgttgttgataagagatgctgatgttgaatgattcatggcttgggtgttcataaatcatgaattga 4446215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 13274863 - 13274814
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggctt 102  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| |||||||    
T  13274863 aattgatgttgttgttgctaagtgatgttgttgatgatgattcatggctt 13274814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 26070435 - 26070507
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| |||| | |||| ||| |||||||| || | ||| | ||||||||||    
T  26070435 aattgatgttgttgttgctaagtgatgttgtggatgattattcatggcttgggtatgcatgattcatgatttg 26070507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 26094222 - 26094294
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| |||| | |||| ||| |||||||| || | ||| | ||||||||||    
T  26094222 aattgatgttgttgttgctaagtgatgttgtggatgattattcatggcttgggtatgcatgattcatgatttg 26094294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 1106 - 1190
Alignment:
Q  42 taatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||| ||||||||||||||||||||||||   |||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  1106 taatcatgtttaattgatgttgttgttgctaaggaatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 31119 - 31023
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||||| |||||||    
T  31119 gaattgtgatgagattcatgttcaattgatgttgttgttgctaagtgatactgttgttgatgattcatggcttgagtgttcataaatcaagatttga 31023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 29918064 - 29917968
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| ||||| ||||||||||||||||||  ||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  29918064 gaattatgatgagaatcatgtttaactgatgttgttgttgctaagagatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 29917968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 6456723 - 6456627
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||| ||||||||| ||| |||||||| |||||||| |||||||||||||    
T  6456723 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagagatatcgttgttgatgattcatggcttgggtgttcatgaatcatgatttga 6456627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 21222756 - 21222852
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || |||| |||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||| ||||    
T  21222756 gaattgtgataagattcatgttcaattaatgttgttgttgctaagtgatattgttgttgatgattcatggattgagtgttcataaatcatgacttga 21222852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 21617115 - 21617019
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||||||||||||| | ||| |||||||| |||||||||| |||||||||||    
T  21617115 gaattgtgatgagattcatgttcaattgatgttgttgttgctaagtgatattgttgttgttgattcatggcttgggtgttcataattcatgatttga 21617019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 23981687 - 23981759
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||| ||||||||||    
T  23981687 aattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataactcatgatttg 23981759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 37983463 - 37983367
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||| || | |||||| |||||||||||||||||||| ||| |||||||||||||||| ||| || ||||| |||||||||||||| |||||||    
T  37983463 gaattgtaatgagaatcatgtttaattgatgttgttgttgttaagtgatattgttgttgatgattcatagcttgggtgttcataaatcaggatttga 37983367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 19862308 - 19862212
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |  ||||||||||||||||||||| ||||||| |||||||| ||| ||| |||| |||||||||| |||||||||||    
T  19862308 gaattgtgataagaatcatgtgcaattgatgttgttgttgctaagtgatattattgttgatgattcatgacttgggtgttcataattcatgatttga 19862212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 23494018 - 23493922
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||| |||||| |||| ||| |||||||| |||||||||| |||||||||||    
T  23494018 gaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgttcataattcatgatttga 23493922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 19873928 - 19873852
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| |||||||||||||||||    
T  19873928 tcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatga 19873852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 21109846 - 21109758
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||  ||||||||| ||||| ||| || ||||| |||||||||||||||||    
T  21109846 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttattgatgattcatagcttgggtgttcataaatcatga 21109758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 24084176 - 24084080
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||   |||||| ||||||||||||||||||||||||   |||||||||||||  ||| |||||||| |||||  |||||||||||||||    
T  24084176 gaattgtgatgtgaatcatgtttaattgatgttgttgttgctaagaaatattgttgttgaagattcatggcttgggtgttagtaaatcatgatttga 24084080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 23234646 - 23234724
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||| |||||||||||||||| ||| |||  ||||||||||||||| ||| || |||||||| ||||||||||||||    
T  23234646 aatcatgtttaattgatgttgttattgttaagagatattgttgttgatgattcatagcttgagttttcataaatcatga 23234724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 432539 - 432466
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||||| |||  ||||||| || ||||||| | |||||||||    
T  432539 aattgatgttgttgttgctaagtgatattgttgttgatgattcctggcttgggtattcataatttatgatttga 432466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 26559966 - 26560050
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatc 117  Q
    ||||||| | ||| || ||||||||||||||||||||||||  |||||||||| |||| |||  ||||||| |||||||||||||    
T  26559966 ttgtgatgagaattatgtttaattgatgttgttgttgctaagagatattgttggtgatgattcttggcttgggtgttcataaatc 26560050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 7728519 - 7728428
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||| |||||| |||| |||||| ||||| |||| ||||| ||||||    
T  7728519 gaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatgttgttgatgataatttatcgcttgggtgtgcataattcatga 7728428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 9730563 - 9730632
Alignment:
Q  54 attgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    |||||||||||||||||| |   ||||||||||| || |||||||||||| ||||||||| |||||||||    
T  9730563 attgatgttgttgttgctgagacatattgttgtttatgatttatggcttgggtgttcatatatcatgatt 9730632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 5450991 - 5451087
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || || |||||||||||||||||| |||| |||||| |||| |||  |||||||  || ||||||||||||||||||    
T  5450991 gaattgtgataaaattcatgttcaactgatgttgttgttgctaagtgatgttgttgatgatgattcttggcttggatgatcataaatcatgatttga 5451087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 22885728 - 22885668
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttg 103  Q
    |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| ||||||||    
T  22885728 aatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatggcttg 22885668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 3673938 - 3673865
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||||||||||  ||  | |||| |||| ||| |||||||| |||||||||||||| |||||||    
T  3673938 aattgatgttgttgttgctaagcgaggtggttgatgatgattcatggcttgggtgttcataaatcacgatttga 3673865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 16835462 - 16835538
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||| ||||||| |||||||||||| |||  ||| ||||||||||| ||| || |||||  ||||||||||||||||    
T  16835462 tcatgtttaattaatgttgttgttgttaagagatgttgttgttgatgattcatagcttggatgttcataaatcatga 16835538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 7528976 - 7528906
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||| |   || |||||||| || ||||||| |||| ||||||||| |||||||||    
T  7528976 aattgatgttgttgttgctgagatatgttgttgtttatgatttatgacttgggtgttcatatatcatgatt 7528906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 10778139 - 10778209
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcata 113  Q
    |||||||| |||||||||||||||||||| |   || |||||| | || |||||||||||| |||||||||    
T  10778139 aatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 10778209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 23417325 - 23417256
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataa 114  Q
    |||| |||||||||||||||||||| ||   | ||||||||||||| ||| || ||||| ||||||||||    
T  23417325 tcatgtttaattgatgttgttgttgttatgaggtattgttgttgatgattcatagcttgggtgttcataa 23417256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 1168375 - 1168447
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| | || |||||| |||| ||| |||||||| || | ||| | ||||||||||    
T  1168375 aattgatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgattcatgatttg 1168447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 11061154 - 11061250
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| ||| |||| || |||||||||||||| |||||| |||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  11061154 gaattgtgataatagtcatgttcaattgatgttgttggtgctaagtgatattgttgttgatgattcatggcttgggtgttcataattcatgatttga 11061250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 12953043 - 12952967
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  12953043 tttaattgatgttgttgttgctaagagatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 12952967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 34559974 - 34559902
Alignment:
Q  54 attgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  34559974 attgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgagtgttcataaatcataatttga 34559902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 17191640 - 17191545
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||| | |||||| |||||||||||||| ||||||||| | || ||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  17191640 gaattgtgataagaatcatgtttaattgatgttgctgttgctaagtaatgttgttgttgatgattcatggcttgagtgttcataattcatgatttg 17191545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 6228787 - 6228869
Alignment:
Q  44 atcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| ||||||||||||||||||||||||   |||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  6228787 atcatgtttaattgatgttgttgttgctaagaaatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 6228869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 41661664 - 41661568
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| | |  ||||||||||||||| ||| || ||||||||||||||||||||||| ||||    
T  41661664 gaattgtgatgagaatcatgtttaattgatgttgttgttgttgagagatattgttgttgatgattcatagcttgagtgttcataaatcatgaattga 41661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 4162366 - 4162449
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||| ||||||||||||||||||||||||    ||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  4162366 aatcatgtttaattgatgttgttgttgctaagaactattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 4162449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 3576586 - 3576681
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||| | | |||| ||| |||||||||||||||||||| | ||||||| |||||| ||| |||||||| |||||||||| ||||||||||    
T  3576586 gaattgtgataagagtcatgtttgattgatgttgttgttgctaagtaatattgtggttgatgattcatggcttgggtgttcataattcatgatttg 3576681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 17204799 - 17204704
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||   |||||| |||||| ||||||||||||||||| | |||||||||||||| ||| |||||||| ||||| |||| ||||||||||    
T  17204799 gaattgtgataggaatcatgtttaatggatgttgttgttgctaagtaatattgttgttgatgattcatggcttgggtgtttataattcatgatttg 17204704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 31412501 - 31412572
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||||||||||||| |||  ||||||||||||||| ||| || |||||||||||||||||||||||    
T  31412501 tttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgagtgttcataaatcatga 31412572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 14814913 - 14815009
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  |||||||||||||||  || ||||| || |||||||| |||||| ||||||    
T  14814913 gaattgtgataagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgtttcatggcctgcgtgttcatgaatcataatttga 14815009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 50313286 - 50313190
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||   |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || | |||||| ||||||||| |||||||||    
T  50313286 gaattgtgatgggaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagtttgagtattcataaattatgatttga 50313190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 12488897 - 12488968
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgattt 124  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| |||||||| |||||||||| |||||||||    
T  12488897 aattgatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtgttcataattcatgattt 12488968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 1990898 - 1990805
Alignment:
Q  34 tgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggctt-gagtgttcataaatcatgatttga 126  Q
    |||||| | |||||| ||||| |||||||||||||| |||  ||||||||||||||| ||| ||||||| |  |||||||||||||||||||||    
T  1990898 tgtgatgagaatcatgtttaaatgatgttgttgttgttaagagatattgttgttgatgattcatggcttggtttgttcataaatcatgatttga 1990805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 9590925 - 9590998
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||| ||| |||||||||||||||| ||| ||| |||| |||||||||  |||||||||||    
T  9590925 aattgatgttgttgttgttaagtgatattgttgttgatgattcatgacttgggtgttcatagttcatgatttga 9590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 33369056 - 33369152
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| ||||||||||||| |||||| |||   |||||||||||||  ||| ||| |||| ||||||||||||||||||||||    
T  33369056 gaattatgatgagaatcatgtttaattgatgtttttgttgttaaggaatattgttgttgacgattcatgacttgggtgttcataaatcatgatttga 33369152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 47784920 - 47784990
Alignment:
Q  55 ttgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||| ||| |||| |||||||| || ||| |||||||| |||||||||| ||||||||||    
T  47784920 ttgatgttgttgttgttaagtgatgttgttgttaatgattcatggcttgggtgttcataattcatgatttg 47784990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 38811179 - 38811252
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| |||||||| |||| ||||| ||||| |||||    
T  38811179 aattgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgtgcataattcatgttttga 38811252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 39656602 - 39656529
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||| ||||||||||| |||||||||||||||| ||| |||| ||  | |||||||| |||||||||||    
T  39656602 aattgatgtggttgttgctaagtgatattgttgttgatgattcatggtttaggggttcataattcatgatttga 39656529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 51961306 - 51961381
Alignment:
Q  51 ttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||| ||   ||| ||||||||||| ||| |||| ||| ||||||| ||||||||||||||    
T  51961306 ttaattgatgttgttgttgatatgagatgttgttgttgatgattcatggtttgggtgttcacaaatcatgatttga 51961381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 16934153 - 16934223
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||| |   || |||||||| || |||||||||||| || ||||||||||||||||    
T  16934153 aattgatgttgttgttgctgagacatgttgttgtttatgatttatggcttgggtattcataaatcatgatt 16934223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 43427667 - 43427753
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | ||||||  ||||||||||||||||||| | |  ||||||||||||||| ||| || ||||  |||||||||||||||||    
T  43427667 ttgtgatgagaatcatgattaattgatgttgttgttgttga--gatattgttgttgatgattcatagctttggtgttcataaatcatga 43427753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 11329132 - 11329204
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| |||||||| || | ||| | ||||||||||    
T  11329132 aattgatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtatgcatgattcatgatttg 11329204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 14080585 - 14080513
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||| |||| || | || ||||||||||| ||||| |||||| || ||||||| ||||||||||    
T  14080585 aattgatgttgttattgcgaagtaatgttgttgttgatgatttacggcttgggtattcataattcatgatttg 14080513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 17139584 - 17139512
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| |||||||| || | ||| | ||||||||||    
T  17139584 aattgatgttgttgttgctaagtgatgttgttgatgataattcatggcttgggtatgcatgattcatgatttg 17139512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 15876167 - 15876072
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||| | | |||| || ||||||||||||||||| ||| |||| |||||  |||| ||| |||||||  || ||||||| ||||||||||    
T  15876167 gaattgtgataagattcatgttcaattgatgttgttgttggtaagtgatgttgttaatgatgattcatggcttaggtattcataattcatgatttg 15876072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 11477370 - 11477440
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    |||||||||||||| |||| |   || |||||||| || |||||||||||| ||||||||| |||||||||    
T  11477370 aattgatgttgttgctgctgagatatgttgttgtttatgatttatggcttgggtgttcatatatcatgatt 11477440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 18911080 - 18911010
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcata 113  Q
    |||||||| |||||||||||||||||||| |   || |||||| | || |||||||||||| |||||||||    
T  18911080 aatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcata 18911010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 14285037 - 14284969
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||||||||||||||| |   || |||||||| || ||||||| |||| ||||||||| |||||||    
T  14285037 aattgatgttgttgttgctcagatatgttgttgtttatgatttatgacttgggtgttcatatatcatga 14284969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 14295514 - 14295442
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||||||||| |||| |||| |||||| |||| ||| |||||||| || | ||| | ||||||||||    
T  14295514 aattgatgttgttgtttctaagtgatgttgttgatgataattcatggcttgggtttgcatgattcatgatttg 14295442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 24884785 - 24884689
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| ||||||||||||||||||||||||  ||||||||||||||| ||| ||| |||| ||||||||||||||||||||||    
T  24884785 gaattgtgatgagattcatgtttaattgatgttgttgttgctaatagatattgttgttgatgattcatgacttgggtgttcataaatcatgatttga 24884689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 19433493 - 19433575
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||| || |||||||||||||||||||||  ||||||||||||||| ||| |||||||| |||||||||| ||||||||||    
T  19433493 aatcatgttcaattgatgttgttgttgctaagagatattgttgttgatgattcatggcttgggtgttcataattcatgatttg 19433575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 68068 - 67995
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||| | ||| |||||||| |||||||||| |||||||||||    
T  68068 aattgatgttgttgttgctaagtgatattgttgttggtgattcatggcttgcgtgttcataattcatgatttga 67995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 23821776 - 23821849
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||| || |||||||||| |||||||||||    
T  23821776 aattgatgttgttgttgctaagtgatattgttgttgatgattcatggcatgggtgttcataattcatgatttga 23821849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 23830855 - 23830928
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||| || |||||||||| |||||||||||    
T  23830855 aattgatgttgttgttgctaagtgatattgttgttgatgattcatggcatgggtgttcataattcatgatttga 23830928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 6094812 - 6094724
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| || ||||||||||||||    
T  6094812 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtattcataaatcatga 6094724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 22138239 - 22138163
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||| |||| || ||||||| |||||| ||||    
T  22138239 tttaattgatgttgttgttgctaagtgatattgttgttggtgatttatgacttgggtattcataattcatgaattga 22138163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 24277860 - 24277764
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| ||||| |||||||||||||| |||  ||||||||||||||| ||| || ||||| ||  ||||||||||||||||||    
T  24277860 gaattgtgatgagaatcatgtttaaatgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtactcataaatcatgatttga 24277764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 9636844 - 9636753
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || | ||| || ||||||||||||||    
T  9636844 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagtttgggtattcataaatcatga 9636753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 3412 - 3482
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| |||||||| |||||||||| ||||||||    
T  3412 aattgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgttcataattcatgatt 3482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 43645979 - 43645897
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||| || ||||||||||||||||||||| |||| ||||||| ||| ||| ||| |||| |||||||||| ||||||||||    
T  43645979 aatcatgttcaattgatgttgttgttgctaagtgatgttgttgtcgatgattcatgacttgggtgttcataattcatgatttg 43645897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 19666604 - 19666531
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| ||||||||| |||||| ||| |||||||| || ||||||| ||||| |||||    
T  19666604 aattgatgttgttgttgctaagtgatattgtcgttgatgattcatggcttgggtattcataattcatgttttga 19666531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 24294694 - 24294766
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| ||||  ||||| |||| ||| ||||||||||| ||||||| ||||||||||    
T  24294694 aattgatgttgttgttgctaagtgatgatgttgatgatgattcatggcttgagtattcataattcatgatttg 24294766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 19669280 - 19669348
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||||||||||||||||| |||| || |||||||| ||| |||||||| || ||||||| ||||||    
T  19669280 aattgatgttgttgttgctaagtgatgttattgttgatgattcatggcttgggtattcataattcatga 19669348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 25305521 - 25305449
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||| ||||| |||| ||||||||||| ||| ||||| || || ||||||| ||||||||||    
T  25305521 aattgatgttgttgtggctaagtgatgttgttgttgatgattcatggcctgggtattcataattcatgatttg 25305449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 24560894 - 24560963
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataa 114  Q
    |||| |||||||||||||||||||| ||   ||||||||||||||| ||| || ||||| ||||||||||    
T  24560894 tcatgtttaattgatgttgttgttgttatgagatattgttgttgatgattcatagcttgggtgttcataa 24560963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 33128144 - 33128046
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttg---agtgttcataaatcatgatttg 125  Q
    |||||||||| | |||||| |||||||||| ||||||| | |||  |||||||||||| || ||| ||||||||    |||||||||| ||||||||||    
T  33128144 gaattgtgatgagaatcatgtttaattgatattgttgtggttaagagatattgttgttaatgattcatggcttgggtggtgttcataactcatgatttg 33128046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 28031418 - 28031488
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||| | |   || |||||||| || |||||||||||| ||||||||| |||||||||    
T  28031418 aattgatgttgttgttgttgagatatgttgttgtttatgatttatggcttgggtgttcatatatcatgatt 28031488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 28974125 - 28974053
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| | || |||||| |||| ||| |||||||| || | ||| | ||||||||||    
T  28974125 aattgatgttgttgttgctaagtcatgttgttgatgataattcatggcttgggtttgcatgattcatgatttg 28974053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 21195113 - 21195017
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| ||||||| |||||||||||| |||  ||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  21195113 gaattgtgatgagaatcatgtttaattaatgttgttgttgttaagagatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 21195017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 37234008 - 37234104
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||||||||||||||| ||| ||| |||| |||| |||||||||||||||||    
T  37234008 gaattgtgatgagattcatgttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatgacttgggtgtccataaatcatgatttga 37234104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 41229100 - 41229182
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||| || ||||||||||||||||||||| |||| |||||||| || ||| ||||||||||||||||||| ||||||||||    
T  41229100 aatcatgttcaattgatgttgttgttgctaagtgatgttgttgttaatgattcatggcttgagtgttcataattcatgatttg 41229182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 17609004 - 17608931
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| ||||||||||| ||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  17609004 aattgttgttgttgttgttaagtgatattgttgttgatgattcatggcttgggtgttcataaatcatgatttga 17608931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 8538058 - 8538154
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| |||||||||||||||||||| |||   |||||||||||||| ||| |||||||| |||||||||||| |||||||||    
T  8538058 gaattatgatgagaatcatgtttaattgatgttgttgttgttaaggaatattgttgttgatgattcatggcttgggtgttcataaataatgatttga 8538154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 8603297 - 8603393
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| |||||||||||||||||||| |||   |||||||||||||| ||| |||||||| |||||||||||| |||||||||    
T  8603297 gaattatgatgagaatcatgtttaattgatgttgttgttgttaaggaatattgttgttgatgattcatggcttgggtgttcataaataatgatttga 8603393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 22143532 - 22143605
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||| |||||| |||||||||||||||| ||| |||||||| || ||||||| |||||||||||    
T  22143532 aattgatgttgttgctgctaagtgatattgttgttgatgattcatggcttgggtattcataattcatgatttga 22143605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 33397448 - 33397360
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||| ||||||||| |||  ||||||||||||||| ||| || ||||| |||||||||||||||||    
T  33397448 ttgtgatgagaatcatgtttaattgatcttgttgttgttaagagatattgttgttgatgattcatagcttgtgtgttcataaatcatga 33397360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 36356464 - 36356536
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||||||||| |||| |||| |||||| |||| |||||||||||| |||||||||| ||||||||||    
T  36356464 aattgatgttgttgtttctaagtgatgttgttgatgatgatttatggcttgggtgttcataattcatgatttg 36356536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 5768320 - 5768408
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || | ||| |||||||||||| ||||    
T  5768320 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagattgggtgttcataaattatga 5768408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 13377011 - 13377083
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| |||||| || | ||| ||||||||||| ||||||| ||||||||||    
T  13377011 aattgatgttgttgttgctaagtgatgttgttgatgttgattcatggcttgagtattcataattcatgatttg 13377083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 49997442 - 49997520
Alignment:
Q  43 aatcatatttaattgatgttgttgttgct-aactgatattgttgttgatcatttatggcttgagtgttcataaatcatg 120  Q
    |||||| ||||| |||||||||||||||| ||  ||||||||||||||||||| |||| ||  ||||||||||||||||    
T  49997442 aatcatgtttaactgatgttgttgttgcttaagagatattgttgttgatcattcatggatttggtgttcataaatcatg 49997520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 20177251 - 20177179
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| ||||||||  | ||||||| ||||||||||    
T  20177251 aattgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttggatattcataattcatgatttg 20177179  T

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Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 40436420 - 40436508
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | ||| || |||||||||||||||||||  |||  ||||||||||||||| ||| || ||||| ||||||| |||||||||    
T  40436420 ttgtgatgagaattatgtttaattgatgttgttgtttttaagagatattgttgttgatgattcatagcttgggtgttcacaaatcatga 40436508  T

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Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 20194128 - 20194059
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataa 114  Q
    |||| ||||||||||||||||||||  |   ||||||||||||||| ||| || ||||||||||||||||    
T  20194128 tcatgtttaattgatgttgttgttgtcatgagatattgttgttgatgattcatagcttgagtgttcataa 20194059  T

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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 17148654 - 17148578
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcat 119  Q
    |||||||| |||||||||||||||||||| |   || |||||| | || |||||||||||| ||||||||| |||||    
T  17148654 aatcatatgtaattgatgttgttgttgctgagatatgttgttgattatgatttatggcttgggtgttcatatatcat 17148578  T

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Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 52400730 - 52400639
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||| |||| | |||||| ||||||||| |||||||||||| |  ||| ||||||||||| ||| || || | | ||||||||||||||||    
T  52400730 gaattatgatgagaatcatgtttaattgacgttgttgttgctgagagatgttgttgttgatgattcatagcgtaaatgttcataaatcatga 52400639  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 21650219 - 21650289
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||| | |   || |||||||| || |||||||||||| ||||||||| |||||||||    
T  21650219 aattgatgttgttgttgttgagacatgttgttgtttatgatttatggcttgggtgttcatatatcatgatt 21650289  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 51627835 - 51627907
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| ||||  ||||| |||| ||| |||||||| || | ||| | ||||||||||    
T  51627835 aattgatgttgttgttgctaagtgatgatgttgatgataattcatggcttgggtatgcatgattcatgatttg 51627907  T

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Target: scaffold0447 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 4661 - 4566
Alignment:
Q  31 aattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||| ||| |||| || ||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||  ||||||||||    
T  4661 aattgtgataatattcattttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataatccatgatttga 4566  T

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Target: scaffold0447; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 9275 - 9180
Alignment:
Q  31 aattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||| ||| |||| || ||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||  ||||||||||    
T  9275 aattgtgataatattcattttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataatccatgatttga 9180  T

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Target: scaffold0004 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 86455 - 86360
Alignment:
Q  31 aattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||| |||||||| ||||||||||||| |||||| |||  ||||||||||||||| ||| || ||||| ||||||||||||||||||||||    
T  86455 aattgtgatgataatcatgtttaattgatgtttttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgatttga 86360  T

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Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 27596 - 27500
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| ||||||||||| |||||||| |||  ||||||||||||||| ||| || ||||| ||||||||||||||||| ||||    
T  27596 gaattgtgatgagaatcatgtttaattgatgatgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgagttga 27500  T

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Target: scaffold0700 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 2601 - 2528
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||| ||| ||||||||||||||||||||||    
T  2601 aattgatgttgttgttgctaagtgatattgttgttgatgattcatggtttgggtgttcataaatcatgatttga 2528  T

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Target: scaffold0162 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 7175 - 7264
Alignment:
Q  32 attgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||| | |||||| || |||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  7175 attgtgataagaatcatgttcaattgatgttgttgctgctaagtgatattgttgttgatgattcatggcttgagtgttcataattcatga 7264  T

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Target: scaffold0162; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 11821 - 11752
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||| |   || |||||||| || |||||||||||| ||||||||| |||||||||    
T  11821 aattgatgttgttgttgctgagacatgttgttgtt-atgatttatggcttgggtgttcatatatcatgatt 11752  T

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Target: scaffold0077 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 6643 - 6547
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| ||||||||||| ||||||||||||  ||||||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  6643 gaattatgatgagaatcatgtttaattgatgatgttgttgctaagagatattgttgttgatgattcatggcttaggtgttcataaatcatgatttga 6547  T

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Target: scaffold0103 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 33738 - 33665
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||| | |||||||||| |||||||||||    
T  33738 aattgatgttgttgttgctaagtgatattgttgttgatgattcatggctagggtgttcataattcatgatttga 33665  T

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Target: scaffold0034 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 40730 - 40661
Alignment:
Q  57 gatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  40730 gatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataattcatgatttga 40661  T

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Target: scaffold0034; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 46237 - 46168
Alignment:
Q  57 gatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||| |||| |||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  46237 gatgttgttgtttctaagtgatattgttgttgatgattcatggcttgggtgttcataattcatgatttga 46168  T

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Target: scaffold0016 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 116687 - 116756
Alignment:
Q  56 tgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||| ||||||||||    
T  116687 tgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataattcatgatttg 116756  T

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Target: scaffold0670 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 7826 - 7914
Alignment:
Q  33 ttgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| |||||||||||||||||    
T  7826 ttgtgatgagaatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatga 7914  T

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Target: scaffold0598 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 3350 - 3255
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| ||||||||||||||||| ||||    
T  3350 gaattgtgatga-aatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgagttga 3255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 7270 - 7174
Alignment:
Q  31 aattgtgattataatcatatttaattg-atgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||| ||| |||| || ||||| |||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||  ||||||||||    
T  7270 aattgtgataatattcattttcaattggatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataatccatgatttga 7174  T

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Target: scaffold0006 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 197401 - 197497
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||||||||||||||||||||| |||||||||||||||| ||| |||| ||| || ||||||||||||| |||||    
T  197401 gaattgtgatgagattcatgttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggtttgggtcttcataaatcatgctttga 197497  T

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Target: scaffold0148 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 37644 - 37561
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || ||||| ||||||||||||||||| ||||    
T  37644 aatcatgtttaattgatgttgttgttgttaagagatattgttgttgatgattcatagcttgggtgttcataaatcatgaattga 37561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 104791 - 104866
Alignment:
Q  51 ttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| |||||||| || ||||||| |||||| ||||    
T  104791 ttaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtattcataattcatgaattga 104866  T

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Target: scaffold0389 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 10738 - 10665
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||| ||||||| |||| ||||||||||||||| |||||||| |||||||||| |||||| ||||    
T  10738 aattgatgttgtttttgctaagtgatgttgttgttgatcattcatggcttgggtgttcataattcatgaattga 10665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 16009 - 16085
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||| |||| || ||||||| |||||| ||||    
T  16009 tttaattgatgttgttgttgctaagtgatattgttgttggtgatttatgacttgggtattcataattcatgaattga 16085  T

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Target: scaffold0390; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 3025 - 3101
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||| | || || ||||||| |||||| ||||    
T  3025 tttaattgatgttgttgttgctaagtgatattgttgttggtgatttatgacatgggtattcataattcatgaattga 3101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 5251 - 5185
Alignment:
Q  60 gttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||  |||||||||||||| | ||| |||||||| || ||||||| |||||| ||||    
T  5251 gttgttgttgctatgtgatattgttgttggtgattcatggcttgggtattcataattcatgaattga 5185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 17469 - 17567
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgag---tgttcataaatcatgatttg 125  Q
    |||||||||| | |||||| |||||||||||||||||| | |||  ||||||||||||||| ||| ||||||||||   ||||||||| ||||||||||    
T  17469 gaattgtgatgagaatcatgtttaattgatgttgttgtggttaagagatattgttgttgatgattcatggcttgagtgatgttcataactcatgatttg 17567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 77018 - 77090
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||||||||| ||||| ||| |||||||| || ||||||| ||||||||||    
T  77018 aattgatgttgttgttgctaagtgatattgttattgatgattcatggcttgggtattcataattcatgatttg 77090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 28612 - 28541
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgattt 124  Q
    ||||||||||||||||||||| |||| |||||||| || ||| |||||||| |||||||||| |||||||||    
T  28612 aattgatgttgttgttgctaagtgatgttgttgttaatgattcatggcttgggtgttcataattcatgattt 28541  T

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Target: scaffold0025 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 85632 - 85537
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||| |||| | |||||| ||||| |||| |||||||||||||  ||||||||||||||| ||| ||| |||| |||||||||||||||| ||||    
T  85632 gaattatgatgagaatcatgtttaagtgatattgttgttgctaagagatattgttgttgatgattcatgacttgggtgttcataaatcatggtttg 85537  T

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Target: scaffold0025; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 53445 - 53350
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | | |||| || ||| ||||||||||||||||| ||| ||||||||| || ||| |||||||| | | |||| |||||||||||||    
T  53445 gaattgtgatgagattcatgttcaatggatgttgttgttgctaagtgacattgttgttaatgattcatggcttgggag-tcattaatcatgatttga 53350  T

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Target: scaffold0020 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 108109 - 108018
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||| |  ||||| |||||||||||||||||||| |||   |||||||||||||| ||| || ||||| |||||||||||||||||    
T  108109 gaattgtgatgaagatcatgtttaattgatgttgttgttgttaagatatattgttgttgatgattcatagcttgggtgttcataaatcatga 108018  T

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Target: scaffold0786 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 4492 - 4568
Alignment:
Q  50 tttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||  ||| || ||||||| |||||| ||||    
T  4492 tttaattgatgttgttgttgctaagtgatattgttgttggtgatttatgatttgggtattcataattcatgaattga 4568  T

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Target: scaffold0786; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 1663 - 1597
Alignment:
Q  60 gttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||| |||||||||||||| | ||| |||||||| || ||||||| |||||| ||||    
T  1663 gttgttgttgctaagtgatattgttgttggtgattcatggcttgggtattcataattcatgaattga 1597  T

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Target: scaffold0253 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 7501 - 7405
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| |||||||||||||| |||||||||  |||||||||| | || ||| |||||||| ||  ||||||||||||||||||    
T  7501 gaattatgatgagaatcatgtttaattgatgttggtgttgctaagagatattgttgctaatgattcatggcttgggtactcataaatcatgatttga 7405  T

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Target: scaffold0253; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 16926 - 16830
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||| |||| | |||||| |||||||||||||| |||||||||  |||||||||| | || ||| |||||||| ||  ||||||||||||||||||    
T  16926 gaattatgatgagaatcatgtttaattgatgttggtgttgctaagagatattgttgctaatgattcatggcttgggtactcataaatcatgatttga 16830  T

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Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 79615 - 79547
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||||||||||||||||| ||||||| |||||||| ||| |||||||| || ||||||| ||||||    
T  79615 aattgatgttgttgttgctaagtgatattattgttgatgattcatggcttgggtattcataattcatga 79547  T

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Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 61382 - 61480
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgag---tgttcataaatcatgatttg 125  Q
    |||||||||| | |||||| |||||||||||||||||| | |||  ||||||||||||||| ||| |||||||| |   ||||||||| ||||||||||    
T  61382 gaattgtgatgagaatcatgtttaattgatgttgttgtggttaagagatattgttgttgatgattcatggcttgtgtgttgttcataactcatgatttg 61480  T

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Target: scaffold0013 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 35554 - 35482
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||| |||||||||| |||| ||||||||||| ||| |||||||| || ||||||| ||||||||||    
T  35554 aattgatgtttttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgatttg 35482  T

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Target: scaffold0151 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 22583 - 22666
Alignment:
Q  43 aatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||| |||||||||||||||||||| ||| |||||||||||||||  ||| || | ||| |||||||| ||| |||||||||    
T  22583 aatcatgtttaattgatgttgttgttgttaattgatattgttgttgaagattcatagtttgggtgttcatgaattatgatttga 22666  T

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Target: scaffold0970 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 2531 - 2470
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataa 114  Q
    ||||||||||||||||||||| |||| ||||||||||| ||| |||||||| || |||||||    
T  2531 aattgatgttgttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataa 2470  T

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Target: scaffold0521 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 11170 - 11097
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||||||||||||  |||| |||||||| || ||| |||||||  ||||||||| ||||||||||||    
T  11170 aattgatgttgttgttgctatgtgatgttgttgtttatgattcatggcttaggtgttcatagatcatgatttga 11097  T

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Target: scaffold0165 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 30063 - 29990
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttg 103  Q
    |||||||||| | |||||| |||||||||||||||||||| |||  ||||||||||||||| ||| || |||||    
T  30063 gaattgtgatgagaatcatgtttaattgatgttgttgttgttaagcgatattgttgttgatgattcatagcttg 29990  T

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Target: scaffold0165; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 22098 - 22038
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgat 90  Q
    |||||||||| | | |||| |||||||||||||||||||| |||  |||||||||||||||    
T  22098 gaattgtgatgagattcatgtttaattgatgttgttgttgttaagagatattgttgttgat 22038  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 97369 - 97442
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||| |||||||| |||| ||||||| |||||||| ||| ||| |||| || |||||||||||||||||||    
T  97369 aattgatattgttgttactaattgatattattgttgatgattcatgccttgggttttcataaatcatgatttga 97442  T

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Target: scaffold1272 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 385 - 313
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| |||| || |||||||| ||| ||| |||| ||| |||||| ||||||||||    
T  385 aattgatgttgttgttgctaagtgatgtttttgttgattattcatgccttgggtgctcataattcatgatttg 313  T

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Target: scaffold0193 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 4704 - 4608
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    ||||||||||   |||||| |||||||||||||||||||| |||    | ||||||||||| ||| |||||||| ||||||||| |||| |||||||    
T  4704 gaattgtgatgggaatcatgtttaattgatgttgttgttgttaagaagttttgttgttgatgattcatggcttgggtgttcatatatcaagatttga 4608  T

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Target: scaffold0153 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 1933 - 1838
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | |||||| |||||||||||||| ||||| |||  ||||||||||||||| ||| || | ||| ||| ||||||||||||| ||||    
T  1933 gaattgtgatgagaatcatgtttaattgatgttgatgttgttaagagatattgttgttgatgattcatagtttgggtg-tcataaatcatgaattga 1838  T

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Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 5017 - 4945
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    ||||||||||||||||||||| | || |||||| |||| ||| ||||||||  ||||||||| ||||||||||    
T  5017 aattgatgttgttgttgctaagtcatgttgttgatgataattcatggcttggttgttcataattcatgatttg 4945  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 131935 - 131839
Alignment:
Q  30 gaattgtgattataatcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||| | ||||||  ||||||| ||||||||||| |||   ||||| |||||||| ||| || ||||| ||||||||||||||||| ||||    
T  131935 gaattgtgatgagaatcatgcttaattgttgttgttgttgttaagaaatatttttgttgatgattcatagcttgggtgttcataaatcatgaattga 131839  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 109664 - 109616
Alignment:
Q  55 ttgatgttgttgttgctaactgatattgttgttgatcatttatggcttg 103  Q
    ||||||||||||||||||| |||| |||||| |||| ||| ||||||||    
T  109664 ttgatgttgttgttgctaagtgatgttgttgatgataattcatggcttg 109616  T

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Target: scaffold0561 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 2952 - 3014
Alignment:
Q  59 tgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||||||| |||  ||||||||||||||| ||| || ||||| |||||||||||||||||    
T  2952 tgttgttgttgttaaaagatattgttgttgatgattcatagcttgggtgttcataaatcatga 3014  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 50027 - 50097
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||| |   || |||||||| || |||||||||||| ||||||||| |||||||||    
T  50027 aattgatgttgttgttgctgagatatgttgttgtttatgatttatggcttgggtgttcatatatcatgatt 50097  T

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Target: scaffold0243 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 2487 - 2560
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||||| |||| |||| |||||| |||| ||| |||||||| | |||||||| ||||| |||||    
T  2487 aattgatgttgttgttcctaagtgatgttgttgatgatgattcatggcttgggcgttcataattcatgttttga 2560  T

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Target: scaffold0123 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 8086 - 8018
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||||||||||||||||  |||| ||||||||||| ||| || ||||| || ||||||| ||||||    
T  8086 aattgatgttgttgttgctatgtgatgttgttgttgatgattcatagcttgggtattcataattcatga 8018  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 70477 - 70545
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    ||||||||||||| ||||||| |||| ||||||||||| |||  ||||||| || ||||||| ||||||    
T  70477 aattgatgttgttattgctaagtgatgttgttgttgatgattcttggcttgggtattcataattcatga 70545  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 147612 - 147556
Alignment:
Q  70 ctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||| |||||||||||||||| ||| |||||||| ||||||||||  ||||||||||    
T  147612 ctaagtgatattgttgttgatgattcatggcttgggtgttcataatccatgatttga 147556  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 68058 - 68121
Alignment:
Q  58 atgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatga 121  Q
    |||||||||||| |||   | |||||||||||| |||||| ||||| |||||||||||||||||    
T  68058 atgttgttgttgttaagatacattgttgttgatgatttatagcttgggtgttcataaatcatga 68121  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 90037 - 90088
Alignment:
Q  75 tgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||| ||||||||||| ||| ||| |||| ||||||||||||||||||||||    
T  90037 tgatgttgttgttgatgattcatgacttgggtgttcataaatcatgatttga 90088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 5301 - 5228
Alignment:
Q  49 atttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatt 123  Q
    ||||||||||||||||||||||| |   || |||||||| || | |||||||||| ||||||||| |||||||||    
T  5301 atttaattgatgttgttgttgctgagacatgttgttgtttatga-ttatggcttgggtgttcatatatcatgatt 5228  T

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Target: scaffold0480 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 9053 - 9102
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggctt 102  Q
    ||||||||||||||||||||| |||| |||||| |||| ||| |||||||    
T  9053 aattgatgttgttgttgctaagtgatgttgttgatgataattcatggctt 9102  T

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Target: scaffold0456 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 1742 - 1791
Alignment:
Q  77 atattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||| ||| |||||||| || ||||||| |||||||||||    
T  1742 atattgttgttgatgattcatggcttgggtattcataattcatgatttga 1791  T

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Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 8887 - 8936
Alignment:
Q  77 atattgttgttgatcatttatggcttgagtgttcataaatcatgatttga 126  Q
    |||||||||||||| ||| |||||||| || ||||||| |||||||||||    
T  8887 atattgttgttgatgattcatggcttgggtattcataattcatgatttga 8936  T

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Target: scaffold0396 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 11879 - 11932
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagt 106  Q
    ||||||||||||||||||||| | || |||||| |||| ||| |||||||||||    
T  11879 aattgatgttgttgttgctaagtcatgttgttgatgataattcatggcttgagt 11932  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 33581 - 33646
Alignment:
Q  49 atttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataa 114  Q
    |||||||||||||||||||||  |   |||||| |||||||| |||||| ||||| ||||||||||    
T  33581 atttaattgatgttgttgttgtcatgagatattattgttgatgatttatagcttgggtgttcataa 33646  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 12849 - 12780
Alignment:
Q  45 tcatatttaattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataa 114  Q
    |||| |||||||||||||||||||| ||   ||||||||||||||| ||| ||  |||| ||||||||||    
T  12849 tcatgtttaattgatgttgttgttgttatgagatattgttgttgatgattcataacttgggtgttcataa 12780  T

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Target: scaffold0483 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 6737 - 6665
Alignment:
Q  53 aattgatgttgttgttgctaactgatattgttgttgatcatttatggcttgagtgttcataaatcatgatttg 125  Q
    |||||||||||||  | |||| |||| || |||||||| ||| |||||||| ||| |||||| ||||||||||    
T  6737 aattgatgttgttactcctaagtgatgtttttgttgatgattcatggcttgggtggtcataattcatgatttg 6665  T

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Target: scaffold0090 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 3321 - 3365
Alignment:
Q  80 ttgttgttgatcatttatggcttgagtgttcataaatcatgattt 124  Q
    ||||||||||| ||| |||||||| |||||||||| |||||||||    
T  3321 ttgttgttgatgattcatggcttgggtgttcataattcatgattt 3365  T

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