View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0740_high_75 (Length: 316)
Name: NF0740_high_75
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0740_high_75 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 37427745 - 37428031
Alignment:
Q |
1 |
tcaatcttatgttaaatgtttgctcaaaaagtctaacaaaccattatggtttcccaatgaagagtacaatatatcccaagatcatcccaaatattgtccc |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
37427745 |
tcaatcttatgttaaatgtttgctcaaaaagtctaacaaaccattatggtttcccaatgaagagtacaatatatcccaagatcatcccaaatattgtccc |
37427844 |
T |
 |
Q |
101 |
acatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttcatatgttgaatgcggtggttgatcttcatcatttttgcatgat |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
37427845 |
acatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttcagatgttgaatgtggtggttgatcttcatcatttttgcatgat |
37427944 |
T |
 |
Q |
201 |
ttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatgtatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
37427945 |
ttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatgtatcaaactgttggccggtaggtatgatt |
37428031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 37701442 - 37701667
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| |||||||||||| || ||| ||||||| |||||||||||||| |||| ||||||||||||||||||||||||| |||||| |||||| |
|
|
T |
37701442 |
gaagaatacattatatcccaagagcaacccgaatattgccccacatgcatatcctattgctaccgctttccagccaaatcctga---ctcttcatcttca |
37701538 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||| |
|
|
T |
37701539 |
gatgttgaatgaggtggaagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcataggaattatttccaaatg |
37701638 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
|||||||||||||||| |||||||||||| |
|
|
T |
37701639 |
tatcaaactgttggcctgtaggtatgatt |
37701667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 59 - 285
Target Start/End: Complemental strand, 37394293 - 37394067
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| |||||||||| | || |||| |||||| ||||||| |||||| ||| |||||||||||||||||||||||||||| ||||| |||||| |
|
|
T |
37394293 |
gaagaatacattatatcccaacagcaacccatatattgccccacatccatatccgattgctaccgctttccagccaaatcctgattcttcttcatcttca |
37394194 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
T |
37394193 |
gatgttgaatgcggtggaagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtattcccttcataagaatcatttccaaatg |
37394094 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatga |
285 |
Q |
|
|
||||||| ||||| || |||||||||| |
|
|
T |
37394093 |
tatcaaattgttgacctgtaggtatga |
37394067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 285
Target Start/End: Original strand, 37434406 - 37434689
Alignment:
Q |
5 |
tcttatgttaaatgtttgctcaaaaagtctaacaaaccattatggtttcccaatgaagag---tacaatatatcccaagatcatcccaaatattgtccca |
101 |
Q |
|
|
|||||||||||| || ||||||| |||||||| || ||||| ||||| ||| |||||| |||| |||||||||| | || ||||||||||| |||| |
|
|
T |
37434406 |
tcttatgttaaacgtatgctcaacaagtctaagaagccattggggttttccagtgaagaagaatacattatatcccaacagcaacccaaatattgcccca |
37434505 |
T |
 |
Q |
102 |
catgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttcatatgttgaatgcggtggttgatcttcatcatttttgcatgatt |
201 |
Q |
|
|
||| |||||| || ||||||| ||||||||||||||||||||| ||||| |||||| |||||||||| ||||| |||||| || ||||||||||||| |
|
|
T |
37434506 |
catccatatccgatcactaccgttttccagccaaatcctgattcttcttcgtcttcagatgttgaatgtggtggcagatctttctcgtttttgcatgatt |
37434605 |
T |
 |
Q |
202 |
tagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatgtatcaaactgttggccggtaggtatga |
285 |
Q |
|
|
|||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||| || |||||||||| |
|
|
T |
37434606 |
tagacaatgggaatccacataacattgtatttccttcataggaatcattttcaaatgtagcaaattgttgacccgtaggtatga |
37434689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 37638499 - 37638727
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| |||||||||| | || ||| ||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||| ||||| |||||| |
|
|
T |
37638499 |
gaagaatacattatatcccaatagcaacccgaatattgccccacatgcatatccgattgctaccgctttccagccaaatccggattcttcttcatcttca |
37638598 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||| | |||||||||||||||| |
|
|
T |
37638599 |
gatgttgaatgaggtggcagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcatttccaaatg |
37638698 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
||| ||||||||| || ||||||||||| |
|
|
T |
37638699 |
tattaaactgttgacctttaggtatgatt |
37638727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 37710260 - 37710488
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| ||||||| || | || ||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||||| |||||| |
|
|
T |
37710260 |
gaagaatacattatatccgaatagcaacccgaatattgccccacatgcatatccgattgctaccgctttccagccaaatcctgattcttcttcatcttca |
37710359 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||||||||| ||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||||| |||||| | |||||||||||||||| |
|
|
T |
37710360 |
gatgttgaatgaggtggcagatcttcctcatttttgcatgatttagacaatggaaatccacacaacattgtatttccttcaaaagaatcatttccaaatg |
37710459 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
||| ||||||||| || ||||||||||| |
|
|
T |
37710460 |
tattaaactgttgacctttaggtatgatt |
37710488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 37822657 - 37822885
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| ||||||| || | || ||| || |||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||||| |||||| |
|
|
T |
37822657 |
gaagaatacattatatccgaatagcaacccgaagattgccccacatgcatatccgattgctaccgctttccagccaaatcctgattcttcttcatcttca |
37822756 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||||||||| ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||||||||||||||| |
|
|
T |
37822757 |
gatgttgaatgaggtggccgatcttcctcatttttgcatgatttagacaatggaaatccacataacattgtatttccttcaaaagaatcatttccaaatg |
37822856 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
||| ||||||||| || ||||||||||| |
|
|
T |
37822857 |
tattaaactgttgacctttaggtatgatt |
37822885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 37695348 - 37695576
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| |||||||||||| | ||| |||||| ||||||| |||||| ||| | || ||||||||||||||||||||||| ||||| |||||| |
|
|
T |
37695348 |
gaagaatacattatatcccaagaggaacccggatattgccccacatccatatccaattgccacagctttccagccaaatcctgattcttcttcatcttca |
37695447 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||| ||||| |||||| |||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |
|
|
T |
37695448 |
gatgtcgaatgtggtggtagatcttcatcatttttgcataatctagacaatgggaatccacataacatagtattcccttcataggaatcatttccaaacg |
37695547 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
||| ||||||||| || ||||||||||| |
|
|
T |
37695548 |
tattaaactgttgacctttaggtatgatt |
37695576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 37531853 - 37532081
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| |||||||||||| | ||| |||||| ||||||| |||||| ||| | || ||||||||||||||||||||||| ||||| |||||| |
|
|
T |
37531853 |
gaagaatacattatatcccaagaggaacccggatattgccccacatccatatccaattgccacagctttccagccaaatcctgattcttcttcatcttca |
37531952 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||| | |||||||||||||||| |
|
|
T |
37531953 |
gatgttgaatgaggtggcagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcatttccaaatg |
37532052 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
||| ||||||||| || ||||||||||| |
|
|
T |
37532053 |
tattaaactgttgacctttaggtatgatt |
37532081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 37592957 - 37593185
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| |||||||||||| | ||| |||||| ||||||| |||||| ||| | || ||||||||||||||||| ||||| ||||| |||||| |
|
|
T |
37592957 |
gaagaatacattatatcccaagaggaacccggatattgccccacatccatatccaattgccacagctttccagccaaatccggattcttcttcatcttca |
37593056 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||| | |||||||||||||||| |
|
|
T |
37593057 |
gatgttgaatgaggtggcagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcatttccaaatg |
37593156 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
||| ||||||||| || ||||||||||| |
|
|
T |
37593157 |
tattaaactgttgacctttaggtatgatt |
37593185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 37402405 - 37402177
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| |||||||||||| | ||| |||||| ||||||| |||||| ||| | || ||||||||||||||||| ||||| ||||| |||||| |
|
|
T |
37402405 |
gaagaatacattatatcccaagaggaacccggatattgccccacatccatatccaattgccacagctttccagccaaatccggattcttcttcatcttca |
37402306 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||| | ||||||||| |||||| |
|
|
T |
37402305 |
gatgttgaatgaggtggcagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcattttcaaatg |
37402206 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
||| ||||||||| || ||||||||||| |
|
|
T |
37402205 |
tattaaactgttgacctttaggtatgatt |
37402177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 70 - 287
Target Start/End: Original strand, 37439834 - 37440051
Alignment:
Q |
70 |
tatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttcatatgttgaatg |
169 |
Q |
|
|
|||||||||| | || ||| ||||||| ||||||| |||||| || || || |||||||||||||||||||||||||||| || ||| |||||||| |
|
|
T |
37439834 |
tatatcccaatagcaacccgaatattgccccacatccatatccgatcaccacagctttccagccaaatcctgattcctcttgatcatcagttgttgaata |
37439933 |
T |
 |
Q |
170 |
cggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatgtatcaaactgt |
269 |
Q |
|
|
||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
T |
37439934 |
tggtggaagatcttcctcatttttgcatggcttagacaatggatatccacataacattgtattcccttcataggaatcatttccaaatgtaccaaactgt |
37440033 |
T |
 |
Q |
270 |
tggccggtaggtatgatt |
287 |
Q |
|
|
|| || | |||||||||| |
|
|
T |
37440034 |
tgacctgcaggtatgatt |
37440051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 99 - 287
Target Start/End: Complemental strand, 37383693 - 37383505
Alignment:
Q |
99 |
ccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttcatatgttgaatgcggtggttgatcttcatcatttttgcatg |
198 |
Q |
|
|
||||||||||||| |||||| || ||||||||||||||||| ||||||||||| || | | ||||||||| || | |||||||||| ||||||||| |
|
|
T |
37383693 |
ccacatgcatatcctattaccactgctttccagccaaatccagattcctcttcatcattagatgttgaatatggcgaccaatcttcatcagttttgcatg |
37383594 |
T |
 |
Q |
199 |
atttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatgtatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
|||| |||||| |||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| || |||||||||||| |
|
|
T |
37383593 |
attttgacaatggaaatccacataacattgtatttccttcaaaggaatcatttccaaatgtaccaaactgttgacctgtaggtatgatt |
37383505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 109; Significance: 8e-55; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 16844403 - 16844175
Alignment:
Q |
59 |
gaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcctcttcttcttca |
158 |
Q |
|
|
||||| |||| |||||||||||| || ||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||| |
|
|
T |
16844403 |
gaagaatacattatatcccaagagcaacccgaatattgcaccacatgcatatccgattgttaccgctttccagccaaatcctgattcttcttcatcttca |
16844304 |
T |
 |
Q |
159 |
tatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatg |
258 |
Q |
|
|
|||||||||| |||| ||||||| |||||||||||||| ||||| ||| |||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
T |
16844303 |
gatgttgaatgttgtggcagatcttcctcatttttgcatgaattagagaatggcaatccacacaacattgtattcccttgataggaatcatttccaaatg |
16844204 |
T |
 |
Q |
259 |
tatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
||| ||| ||||| || |||||||||||| |
|
|
T |
16844203 |
tattaaattgttgacctgtaggtatgatt |
16844175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 48 - 287
Target Start/End: Complemental strand, 24219149 - 24218910
Alignment:
Q |
48 |
ggtttcccaatgaagagtacaatatatcccaagatcatcccaaatattgtcccacatgcatatcttattactaccgctttccagccaaatcctgattcct |
147 |
Q |
|
|
||||||||| |||||| ||| |||||||||||| || |||| || || ||||||| |||||| |||| |||| ||||||||||||||||| ||||||| |
|
|
T |
24219149 |
ggtttcccagtgaagaacacactatatcccaagaggattccaagtactgccccacatccatatcctattgctactgctttccagccaaatcccgattcct |
24219050 |
T |
 |
Q |
148 |
cttcttcttcatatgttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatc |
247 |
Q |
|
|
| || || | | | ||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||||||| |
|
|
T |
24219049 |
cgtcatcattagacgttgaatatggtggccgatcttcatcatttttgcatgattttgacaatggaaatccacataacattgcatttccttcataggaatc |
24218950 |
T |
 |
Q |
248 |
atttccaaatgtatcaaactgttggccggtaggtatgatt |
287 |
Q |
|
|
|||||||||||| | ||| ||||||||||||||||||||| |
|
|
T |
24218949 |
atttccaaatgtgttaaattgttggccggtaggtatgatt |
24218910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 16846966 - 16846844
Alignment:
Q |
162 |
gttgaatgcggtggttgatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatgtat |
261 |
Q |
|
|
|||||||| ||||| ||||||| |||||||| ||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
T |
16846966 |
gttgaatgtggtggcagatcttcctcatttttt-atgatttagacgatgggaatccacacaacattgtatttccttcataggaatcatttccaaatgtag |
16846868 |
T |
 |
Q |
262 |
caaactgttggccggtaggtatga |
285 |
Q |
|
|
||| ||||| || |||||||||| |
|
|
T |
16846867 |
aaaattgttgacctgtaggtatga |
16846844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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