View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0740_low_104 (Length: 309)
Name: NF0740_low_104
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0740_low_104 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 27 - 309
Target Start/End: Complemental strand, 42217377 - 42217095
Alignment:
| Q |
27 |
tcacttcaaaataattgaaagtaagaaaatgacaagacattgaatgattggatgtcggttatcataccaacaagactctaagccgtaagagtgttcacta |
126 |
Q |
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| T |
42217377 |
tcacttcaaaataattgaaagtaagaaaatgacaagacattgaatgattggatgtcggttatcataccaacaagactctaagccgtaagagtgttcacta |
42217278 |
T |
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| Q |
127 |
aaaagtgatgctgattgaaactatatatatttaaatgtcattattagcagactaacccaaagtagagagatattgcactgcatagtgcatacaaatgcaa |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42217277 |
aaaagtgatgctgattgaaactatatatatttaaatgtcattattagcagactaacccaaagtagagagatattgcactgcatagtgcatacaaatgcaa |
42217178 |
T |
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| Q |
227 |
ggttgatttgatttaaacttgttttcttgtgcagcaaggtgataggagcaaaatacttcaacctcgacccatctggtccaacc |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42217177 |
ggttgatttgatttaaacttgttttcttgtgcagcaaggtgataggagcaaaatacttcaacctcgacccatctggtccaacc |
42217095 |
T |
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