View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0740_low_132 (Length: 267)
Name: NF0740_low_132
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0740_low_132 |
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| [»] scaffold0147 (1 HSPs) |
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Alignment Details
Target: scaffold0147 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0147
Description:
Target: scaffold0147; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 20360 - 20525
Alignment:
| Q |
17 |
ccataccttgattaatacaaagatttttcctggaacctaaactcacaacacccatttcatcagcaaacactgtctttctcaactcctttacaaactgtga |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| |
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| T |
20360 |
ccataccttgattaatacaaagatttttcctggaacctaaactcacaacacccatttcatcagcaaacaccgttttcctcaactcctttacaaactgtga |
20459 |
T |
|
| Q |
117 |
aagctgcgaatgtgtcctactacaaaaataaaccttcaatttcttctcctcttcctcttcttcatc |
182 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20460 |
aagctgcgaatgtgtcctactacaaaaataaaccttcaatttcttctcctcttcctcttcttcatc |
20525 |
T |
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