View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0740_low_140 (Length: 258)
Name: NF0740_low_140
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0740_low_140 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 258
Target Start/End: Original strand, 42216862 - 42217104
Alignment:
| Q |
16 |
atgaagttgacaccatcagcaatggcctcatcaaagccagcaagcatgtccatgtcactgcacccaatggtccaacaaactttatacattgcaatacgtg |
115 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
42216862 |
atgaagttgacaccatcagcaatggcctcatcaaagccagcaagcatgtccatgtcactgcacccaatggtccaacaaactttatacattgcaatgcgtg |
42216961 |
T |
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| Q |
116 |
ctgatgggacaccgccacgggcattgcctttaccaatgccataaagacttgcacccctcaccactgatccagccgctgtcgacgaagtgtgagtgccatg |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
42216962 |
ctgatgggacaccgccacgggcattgcctttaccaatgccataaagacttgcacctctcaccactgatccagctgctgtcgacgaagtgtgagtgccatg |
42217061 |
T |
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| Q |
216 |
gccctgatcatcaaccggacttgggttctcgatggttggacca |
258 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||| |
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| T |
42217062 |
gccctgatcatccaccggacttgggttctcgatggttggacca |
42217104 |
T |
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