View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0740_low_146 (Length: 251)

Name: NF0740_low_146
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0740_low_146
NF0740_low_146
[»] chr2 (27 HSPs)
chr2 (1-243)||(1244390-1244628)
chr2 (1-67)||(11133068-11133135)
chr2 (1-69)||(14307730-14307798)
chr2 (1-53)||(29713125-29713177)
chr2 (14-49)||(39118404-39118439)
chr2 (16-62)||(34376540-34376586)
chr2 (1-63)||(37065470-37065532)
chr2 (15-68)||(2057473-2057526)
chr2 (1-66)||(44487803-44487868)
chr2 (15-50)||(6649958-6649993)
chr2 (1-60)||(18065254-18065313)
chr2 (13-68)||(22355075-22355130)
chr2 (5-66)||(29664596-29664658)
chr2 (13-59)||(36386161-36386207)
chr2 (1-55)||(44132599-44132653)
chr2 (1-62)||(44187701-44187763)
chr2 (14-67)||(5772853-5772906)
chr2 (1-66)||(6282229-6282294)
chr2 (2-67)||(30876943-30877008)
chr2 (1-66)||(34107268-34107333)
chr2 (13-66)||(36277750-36277803)
chr2 (1-49)||(917327-917375)
chr2 (15-63)||(9419030-9419078)
chr2 (1-49)||(20684282-20684330)
chr2 (16-67)||(34034343-34034395)
chr2 (15-63)||(34830584-34830632)
chr2 (1-69)||(39334917-39334985)
[»] chr1 (40 HSPs)
chr1 (1-67)||(7906362-7906428)
chr1 (1-67)||(9768845-9768911)
chr1 (1-66)||(42908765-42908830)
chr1 (3-67)||(18003809-18003873)
chr1 (1-66)||(41182768-41182833)
chr1 (1-66)||(52961118-52961183)
chr1 (2-66)||(3569038-3569102)
chr1 (1-49)||(50199512-50199560)
chr1 (1-60)||(13941319-13941378)
chr1 (1-67)||(17350053-17350120)
chr1 (1-67)||(29491462-29491529)
chr1 (1-67)||(1721133-1721199)
chr1 (1-66)||(9527419-9527485)
chr1 (15-69)||(18179319-18179373)
chr1 (1-63)||(23930580-23930642)
chr1 (14-66)||(33176152-33176204)
chr1 (6-61)||(9004345-9004400)
chr1 (1-64)||(19536713-19536776)
chr1 (15-62)||(37262155-37262202)
chr1 (1-68)||(42801871-42801938)
chr1 (1-60)||(43020611-43020670)
chr1 (15-65)||(9410377-9410427)
chr1 (1-62)||(12553191-12553253)
chr1 (3-68)||(40678814-40678880)
chr1 (1-63)||(43837437-43837499)
chr1 (2-63)||(1580826-1580887)
chr1 (1-62)||(4429518-4429579)
chr1 (1-54)||(5862134-5862187)
chr1 (15-56)||(9074000-9074041)
chr1 (21-66)||(38114852-38114897)
chr1 (1-66)||(41677054-41677119)
chr1 (2-59)||(47645833-47645890)
chr1 (1-54)||(50575907-50575960)
chr1 (1-49)||(2903063-2903111)
chr1 (1-68)||(8741468-8741535)
chr1 (2-66)||(11238065-11238129)
chr1 (1-68)||(19976588-19976656)
chr1 (1-68)||(39238707-39238775)
chr1 (1-65)||(47088807-47088871)
chr1 (1-49)||(47141842-47141890)
[»] chr7 (37 HSPs)
chr7 (3-67)||(10474550-10474614)
chr7 (1-63)||(11808035-11808097)
chr7 (2-62)||(32814825-32814885)
chr7 (1-49)||(43712349-43712397)
chr7 (29-68)||(24440979-24441018)
chr7 (1-72)||(45267962-45268033)
chr7 (2-65)||(48053144-48053207)
chr7 (1-67)||(1649145-1649211)
chr7 (1-66)||(21285389-21285455)
chr7 (1-67)||(35195836-35195902)
chr7 (18-68)||(38363151-38363201)
chr7 (1-54)||(10020505-10020558)
chr7 (13-62)||(37410529-37410578)
chr7 (5-66)||(37917386-37917447)
chr7 (2-66)||(41139080-41139145)
chr7 (1-70)||(48174957-48175026)
chr7 (5-68)||(14818405-14818469)
chr7 (5-68)||(15265403-15265467)
chr7 (1-37)||(33236303-33236339)
chr7 (1-60)||(16916457-16916516)
chr7 (16-59)||(38328617-38328660)
chr7 (1-67)||(7392342-7392408)
chr7 (1-63)||(7465463-7465525)
chr7 (13-67)||(8766859-8766913)
chr7 (1-66)||(15912768-15912834)
chr7 (1-66)||(20527465-20527531)
chr7 (13-67)||(32534633-32534687)
chr7 (1-67)||(43635581-43635647)
chr7 (18-67)||(17305443-17305492)
chr7 (1-62)||(23799298-23799359)
chr7 (1-66)||(38032891-38032956)
chr7 (1-69)||(41417311-41417380)
chr7 (1-49)||(1513498-1513546)
chr7 (1-45)||(7162704-7162748)
chr7 (13-65)||(25304173-25304225)
chr7 (2-46)||(32309185-32309229)
chr7 (1-65)||(33996889-33996953)
[»] chr6 (25 HSPs)
chr6 (1-66)||(25064705-25064770)
chr6 (1-66)||(30833011-30833076)
chr6 (1-66)||(10455736-10455801)
chr6 (3-67)||(34524868-34524932)
chr6 (6-67)||(4844136-4844197)
chr6 (1-66)||(6455447-6455512)
chr6 (5-68)||(2945587-2945651)
chr6 (2-49)||(20858420-20858467)
chr6 (1-66)||(26669695-26669760)
chr6 (1-49)||(5544287-5544335)
chr6 (25-68)||(7228857-7228900)
chr6 (15-66)||(9031760-9031811)
chr6 (1-67)||(9064858-9064925)
chr6 (1-60)||(18631472-18631531)
chr6 (2-61)||(22850810-22850869)
chr6 (1-67)||(9443499-9443565)
chr6 (1-66)||(14981738-14981804)
chr6 (1-66)||(2955140-2955205)
chr6 (15-68)||(22730752-22730805)
chr6 (1-68)||(3448343-3448411)
chr6 (1-49)||(8253626-8253674)
chr6 (2-62)||(10442883-10442943)
chr6 (14-66)||(17305510-17305562)
chr6 (1-70)||(18904257-18904327)
chr6 (33-65)||(24319011-24319043)
[»] chr8 (30 HSPs)
chr8 (1-68)||(39432364-39432431)
chr8 (2-68)||(14012603-14012670)
chr8 (2-68)||(216184-216250)
chr8 (2-68)||(692744-692810)
chr8 (2-68)||(696953-697019)
chr8 (2-68)||(729807-729873)
chr8 (2-68)||(853702-853768)
chr8 (1-67)||(29937203-29937269)
chr8 (1-67)||(32940350-32940416)
chr8 (1-66)||(14011074-14011139)
chr8 (1-65)||(26657851-26657915)
chr8 (13-65)||(28979021-28979073)
chr8 (2-62)||(36593192-36593252)
chr8 (1-66)||(18123854-18123920)
chr8 (1-68)||(6325263-6325329)
chr8 (2-68)||(220399-220465)
chr8 (2-68)||(689554-689620)
chr8 (2-68)||(734022-734088)
chr8 (2-68)||(857918-857984)
chr8 (1-66)||(2800012-2800078)
chr8 (1-63)||(4798577-4798639)
chr8 (1-59)||(12560033-12560090)
chr8 (1-47)||(22847298-22847344)
chr8 (1-63)||(25119205-25119267)
chr8 (1-66)||(33982183-33982249)
chr8 (1-63)||(43468741-43468803)
chr8 (15-68)||(2801747-2801800)
chr8 (1-62)||(6372639-6372700)
chr8 (5-66)||(18577107-18577168)
chr8 (1-54)||(43554455-43554508)
[»] chr3 (29 HSPs)
chr3 (1-67)||(43774177-43774244)
chr3 (1-60)||(4045670-4045729)
chr3 (1-68)||(24130551-24130618)
chr3 (1-67)||(16874226-16874292)
chr3 (14-62)||(3973300-3973348)
chr3 (14-62)||(3996528-3996576)
chr3 (2-54)||(51412027-51412079)
chr3 (1-71)||(9624971-9625042)
chr3 (14-60)||(4010067-4010113)
chr3 (1-59)||(51017791-51017849)
chr3 (1-57)||(12711971-12712028)
chr3 (1-66)||(19137613-19137678)
chr3 (1-69)||(24160564-24160632)
chr3 (1-68)||(27183717-27183785)
chr3 (1-49)||(34407126-34407174)
chr3 (13-68)||(41767816-41767872)
chr3 (1-63)||(13540000-13540062)
chr3 (1-66)||(14868678-14868744)
chr3 (1-63)||(16277987-16278049)
chr3 (1-63)||(42271049-42271111)
chr3 (13-63)||(44591997-44592047)
chr3 (1-62)||(3461760-3461821)
chr3 (13-66)||(12236593-12236646)
chr3 (1-61)||(31576509-31576570)
chr3 (2-66)||(4478405-4478469)
chr3 (1-69)||(6284868-6284936)
chr3 (3-47)||(21142771-21142815)
chr3 (1-49)||(35540993-35541041)
chr3 (1-65)||(45871015-45871079)
[»] scaffold0168 (1 HSPs)
scaffold0168 (2-68)||(34070-34136)
[»] chr5 (26 HSPs)
chr5 (1-66)||(9963409-9963475)
chr5 (1-66)||(7147055-7147120)
chr5 (1-66)||(3535972-3536037)
chr5 (1-66)||(38040260-38040325)
chr5 (8-68)||(11246537-11246597)
chr5 (1-69)||(13862116-13862184)
chr5 (1-69)||(40250213-40250281)
chr5 (1-71)||(25660901-25660971)
chr5 (1-55)||(42781630-42781684)
chr5 (1-66)||(27006334-27006399)
chr5 (13-65)||(31907646-31907698)
chr5 (1-67)||(6806676-6806743)
chr5 (14-65)||(35813291-35813342)
chr5 (1-67)||(37303926-37303993)
chr5 (3-54)||(38040130-38040181)
chr5 (1-60)||(41405124-41405183)
chr5 (1-67)||(4985752-4985818)
chr5 (1-63)||(18872518-18872580)
chr5 (17-67)||(31004182-31004232)
chr5 (1-63)||(36742003-36742065)
chr5 (1-66)||(19608607-19608672)
chr5 (13-54)||(28768603-28768644)
chr5 (1-66)||(31556812-31556877)
chr5 (14-63)||(38361482-38361531)
chr5 (6-62)||(20186864-20186920)
chr5 (13-49)||(39955011-39955047)
[»] chr4 (41 HSPs)
chr4 (1-63)||(27921893-27921955)
chr4 (1-67)||(37728932-37728998)
chr4 (1-67)||(41492534-41492600)
chr4 (1-67)||(49039481-49039547)
chr4 (1-67)||(52556711-52556777)
chr4 (6-66)||(15185072-15185132)
chr4 (2-62)||(39293519-39293579)
chr4 (1-64)||(9062172-9062235)
chr4 (1-60)||(20610739-20610798)
chr4 (1-63)||(13211388-13211450)
chr4 (1-67)||(29785143-29785209)
chr4 (1-66)||(36008268-36008334)
chr4 (15-69)||(38657531-38657585)
chr4 (1-66)||(48968246-48968312)
chr4 (1-67)||(54854215-54854281)
chr4 (14-71)||(12796655-12796712)
chr4 (1-66)||(20166310-20166375)
chr4 (1-49)||(42432019-42432067)
chr4 (14-69)||(48512189-48512245)
chr4 (5-73)||(49319380-49319448)
chr4 (2-61)||(2942183-2942242)
chr4 (1-63)||(33076529-33076589)
chr4 (1-67)||(53815688-53815755)
chr4 (1-63)||(9924853-9924915)
chr4 (1-66)||(12820441-12820507)
chr4 (1-67)||(15853815-15853881)
chr4 (1-39)||(18497413-18497451)
chr4 (1-66)||(28520767-28520833)
chr4 (1-67)||(33359810-33359876)
chr4 (1-63)||(35909199-35909261)
chr4 (1-66)||(40150466-40150532)
chr4 (1-66)||(42411490-42411556)
chr4 (1-67)||(49743355-49743421)
chr4 (2-66)||(2565254-2565319)
chr4 (1-54)||(35230331-35230384)
chr4 (1-54)||(44272942-44272995)
chr4 (1-68)||(9084750-9084818)
chr4 (1-68)||(9692953-9693021)
chr4 (1-68)||(14149784-14149852)
chr4 (1-61)||(16336511-16336571)
chr4 (1-49)||(37997882-37997930)
[»] scaffold0712 (1 HSPs)
scaffold0712 (13-67)||(4513-4567)
[»] scaffold0709 (1 HSPs)
scaffold0709 (13-67)||(4533-4587)
[»] scaffold0112 (1 HSPs)
scaffold0112 (1-66)||(17967-18033)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-66)||(1033-1098)
[»] scaffold0247 (1 HSPs)
scaffold0247 (18-54)||(20729-20765)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-66)||(7069-7135)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-66)||(25019-25085)
[»] scaffold2098 (1 HSPs)
scaffold2098 (2-66)||(650-715)
[»] scaffold1808 (1 HSPs)
scaffold1808 (17-66)||(885-934)
[»] scaffold0118 (1 HSPs)
scaffold0118 (14-63)||(37377-37426)
[»] scaffold0178 (1 HSPs)
scaffold0178 (1-61)||(4322-4382)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-61)||(56289-56349)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 1244628 - 1244390
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaatatgttcaaatttgtttagggtctattggatc 100  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||    
T  1244628 gttcgaacccccacccctgcatatagcaatgtatgtccctgccaactgaactatgctcacgaggacaatatgttcaaatttgtttagggtctattgaatc 1244529  T
Q  101 gataaatgtaatcaagacgaaatggaactcaaatcaactaaggtgaatactctttgttctttgaagctttgtcaaatacttatccattattcaataataa 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||    
T  1244528 gataaatgtaaacaagacgaaatggaactcaaatcaactaaggtgaatactctttgtactctcaagctttgtcaaatacttatccattattcaataataa 1244429  T
Q  201 nnnnnnnncttcttcaaatagcctactactagacattcatctc 243  Q
             |||| |||||||||||||||||||||||||||||    
T  1244428 ttttt----ttctccaaatagcctactactagacattcatctc 1244390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11133135 - 11133068
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||| ||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||    
T  11133135 gttcgaaccccgacccctgcatataacaatgcattgtccctaccaactgagctatgctcacggggaca 11133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14307730 - 14307798
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaat 69  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||||| | || ||||||| ||||||    
T  14307730 gttcgaacctcgacccctgcatataacaatgcatgtccctaccaactgagccatgctcacggagacaat 14307798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29713125 - 29713177
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaacta 53  Q
    ||||||||||| | |||||||||||||||||||||||| | ||||||||||||    
T  29713125 gttcgaaccccaatccctgcatataacaatgtatgtccgtgccaactgaacta 29713177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 39118439 - 39118404
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactga 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  39118439 cccctgcatataacaatgtatgtccctaccaactga 39118404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 34376586 - 34376540
Alignment:
Q  16 cctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||||    
T  34376586 cctgcatataacaatgcatgtccctgccaactgaattatactcacgg 34376540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37065470 - 37065532
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| ||| ||||||||||||||| |||||| ||||||| || |||| ||||||||    
T  37065470 gttcgaaccccgaccactgcatataacaatgcatgtccataccaacagagctatgctcacggg 37065532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 2057526 - 2057473
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||||||||||||| ||||| |||||||| |||| ||||||| |||||    
T  2057526 ccctgcatataacaatgtatatccctgccaactgagctatgctcacggtgacaa 2057473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44487803 - 44487868
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||| ||  ||| ||||||||| |||| ||||||||| ||||||| ||||||||||||||||    
T  44487803 gttcgaactccggcccttgcatataataatgcatgtccctatcaactgagctatactcacggggac 44487868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 6649993 - 6649958
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaa 50  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6649993 ccctgcatataacaacgtatgtccctaccaactgaa 6649958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18065313 - 18065254
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcac 60  Q
    ||||||||| | ||||||||||||||||||| ||| | ||||||||||| |||| |||||    
T  18065313 gttcgaacctcaacccctgcatataacaatgcatgcctctaccaactgagctatgctcac 18065254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 22355130 - 22355075
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||||| ||||||||| |||||| | |||||||| |||| |||||||||||||    
T  22355130 acccctgcacataacaatgcatgtccttgccaactgagctatgctcacggggacaa 22355075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 29664658 - 29664596
Alignment:
Q  5 gaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    ||||||| ||||||||||||||||||| | ||||||| |||| ||| |||| |||||||||||    
T  29664658 gaaccccgacccctgcatataacaatgcattgtccctgccaattgagctatgctcacggggac 29664596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 36386161 - 36386207
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactca 59  Q
    ||||||||||||||||||| || |||||||||||||| |||| ||||    
T  36386161 acccctgcatataacaatgcatatccctaccaactgagctatgctca 36386207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44132599 - 44132653
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactata 55  Q
    ||||||||||| ||| ||||||||||||||| ||||| || |||||||| |||||    
T  44132599 gttcgaaccccgacctctgcatataacaatgcatgtctctgccaactgagctata 44132653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44187763 - 44187701
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacgg 62  Q
    ||||||||||| |||||||||||||| |||| | | ||||| ||||||||||||| |||||||    
T  44187763 gttcgaaccccgacccctgcatataataatgcattatccctgccaactgaactatgctcacgg 44187701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 5772906 - 5772853
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||||||||  |||||| | |||||||| |||| ||||||||||||    
T  5772906 cccctgcatataacaatacatgtccttgccaactgagctatgctcacggggaca 5772853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6282294 - 6282229
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||| ||||||  ||| ||||||||| ||||  |||||||| ||||||| ||||||||||||||||    
T  6282294 gttcaaaccccgtcccttgcatataataatgcgtgtccctaacaactgagctatactcacggggac 6282229  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 30877008 - 30876943
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||| || ||||||||||||||||||  ||| ||||||||||| | |||| ||||||| ||||    
T  30877008 ttcgaactccgacccctgcatataacaatacatgaccctaccaactaagctatgctcacggtgaca 30876943  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34107333 - 34107268
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||| | ||||||||||||||  ||  |||||||| |||||||| |||| |||||||||||    
T  34107333 gttcgaacctcaacccctgcatataattatacatgtccctgccaactgagctatgctcacggggac 34107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 36277750 - 36277803
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||| |||||||||||| ||||| || |||||||| |||| |||||||||||    
T  36277750 acccctacatataacaatgcatgtcactgccaactgagctatgctcacggggac 36277803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 917327 - 917375
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    ||||||| ||| |||||||||||||| |||| ||||| |||||||||||    
T  917327 gttcgaatcccgacccctgcatataataatgcatgtctctaccaactga 917375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 9419030 - 9419078
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||| |||||| |||| ||||||||||||||| ||||||| |||||||    
T  9419030 ccctgtatataataatgcatgtccctaccaactaaactatattcacggg 9419078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20684330 - 20684282
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    |||||||| || |||||||||||||| |||||||||||||  |||||||    
T  20684330 gttcgaactccgacccctgcatataataatgtatgtccctgtcaactga 20684282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 34034395 - 34034343
Alignment:
Q  16 cctgcatataacaatgtat-gtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||| ||||||| |||||| |||||||| |||| ||||||||||||    
T  34034395 cctgcatataataatgtattgtccctgccaactgagctatgctcacggggaca 34034343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 34830632 - 34830584
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||||||||| || || ||||||| ||| |||||||||||||    
T  34830632 ccctgcatataacaatgcatatctctaccaagtgagctatactcacggg 34830584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39334917 - 39334985
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaat 69  Q
    |||||||||||  |||||| |||||| |||| |||||||| ||||||||  ||| |||||||| |||||    
T  39334917 gttcgaaccccagcccctgtatataataatgcatgtccctgccaactgagttatgctcacgggaacaat 39334985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7906362 - 7906428
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  7906362 gttcgaaccccagcccctgcatataacaatgcatgtccctaccaactgaactatgctcacggggaca 7906428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9768845 - 9768911
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||| |||| ||||||||||||    
T  9768845 gttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 9768911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42908830 - 42908765
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||| |||  |||||||||||    
T  42908830 gttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagctaagctcacggggac 42908765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 18003873 - 18003809
Alignment:
Q  3 tcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||  |||||||||||||||||| |||||||| |||||||| |||| ||||||||||||    
T  18003873 tcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 18003809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41182833 - 41182768
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||| |||||| |||||||||||||||||||||| | ||| |||| ||||||||||||||| ||||    
T  41182833 gttcaaaccccgacccctgcatataacaatgtatatacctgccaattgaactatactcacgaggac 41182768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 52961118 - 52961183
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  |||||||||||||||||| |||||| | |||||||| |||| |||||||||||    
T  52961118 gttcgaaccccggcccctgcatataacaatgcatgtccttgccaactgagctatgctcacggggac 52961183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 3569102 - 3569038
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||  |||||| |||||||||||| |||||||| |||||||||||||||| || |||||    
T  3569102 ttcgaaccctgacccctacatataacaatgcatgtccctgccaactgaactatacttacagggac 3569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50199512 - 50199560
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||||    
T  50199512 gttcgaaccccggcccctgcatataacaatgcatgtccctaccaactga 50199560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13941378 - 13941319
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcac 60  Q
    ||||||||| | | ||||||||||||||||| |||||| | |||||||||||||||||||    
T  13941378 gttcgaacctcgaaccctgcatataacaatgcatgtccttgccaactgaactatactcac 13941319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17350120 - 17350053
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||||||||||||||||    
T  17350120 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatactcacggggaca 17350053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29491529 - 29491462
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||| |||||||||||||| |||| | ||||||| |||||||| |||| ||||||||||||    
T  29491529 gttcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 29491462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1721199 - 1721133
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||| |||  |||||||||||||||||| |||| |||||||||||| |||| ||||| ||||||    
T  1721199 gttcgaaacccggcccctgcatataacaatgcatgttcctaccaactgagctatgctcacagggaca 1721133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9527485 - 9527419
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    |||| |||||| ||||||||||||||||||| | ||||||| |||||||| |||| |||||||||||    
T  9527485 gttcaaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 9527419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 18179373 - 18179319
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaat 69  Q
    ||||||||||||||||| |||||||| ||||||||  ||| ||||||||||||||    
T  18179373 ccctgcatataacaatgcatgtccctgccaactgagttatgctcacggggacaat 18179319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23930580 - 23930642
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| |||||||||||||| |||| ||   ||||||||||||||||| ||||||||    
T  23930580 gttcgaaccccgacccctgcatataataatgcattgtcctaccaactgaactatgctcacggg 23930642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 33176152 - 33176204
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||||||||| || |||||||||||||| |||| |||| ||||||    
T  33176152 cccctgcatataacaatgcatatccctaccaactgagctatgctcaaggggac 33176204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 9004400 - 9004345
Alignment:
Q  6 aacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacg 61  Q
    |||||| | |||||||||||||||| ||||||||| |||||||| |||| ||||||    
T  9004400 aaccccaatccctgcatataacaatatatgtccctgccaactgagctatgctcacg 9004345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19536776 - 19536713
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgggg 64  Q
    |||||||||||  ||||| |||||| ||||| ||||||||||||||||| |||| || ||||||    
T  19536776 gttcgaaccccagcccctacatatagcaatgcatgtccctaccaactgagctatgcttacgggg 19536713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 37262155 - 37262202
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    ||||||||||||||| | |||||||| ||||||||||||| |||||||    
T  37262155 ccctgcatataacaacgcatgtccctgccaactgaactatgctcacgg 37262202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42801938 - 42801871
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||  ||||||| ||||  ||||||||||||    
T  42801938 gttcgaaccccaacctctgcatataacaatgcatgtctctgtcaactgagctatgttcacggggacaa 42801871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 43020670 - 43020611
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcac 60  Q
    ||||||||||| |||||||||||||| |||| |||||||| ||||| || |||| |||||    
T  43020670 gttcgaaccccaacccctgcatataataatgcatgtccctgccaaccgagctatgctcac 43020611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 9410377 - 9410427
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    ||||||||||||| ||| |||||| | ||||||||||||| ||||||||||    
T  9410377 ccctgcatataactatgcatgtccttgccaactgaactatgctcacgggga 9410427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12553253 - 12553191
Alignment:
Q  1 gttcgaaccccca-cccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    ||||||||||||  |||||||||||||||||| |||| |||||||||||| || | |||||||    
T  12553253 gttcgaacccccggcccctgcatataacaatgcatgttcctaccaactgagctgtgctcacgg 12553191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 40678880 - 40678814
Alignment:
Q  3 tcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||||||||||||| |||| || |||||| |||||||| |||| |||||||||||||    
T  40678880 tcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaa 40678814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43837437 - 43837499
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| ||||||||||| || |||| || | |||||||||||| |||| ||||||||    
T  43837437 gttcgaaccccgacccctgcatagaagaatgcattttcctaccaactgagctatgctcacggg 43837499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 1580887 - 1580826
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    |||||||| | |||| ||||||||||| ||||||||||| ||||||||  ||| ||||||||    
T  1580887 ttcgaacctcaacccttgcatataacattgtatgtccctgccaactgagttatgctcacggg 1580826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4429518 - 4429579
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    ||||||||||| |||||||||||||| |||| ||   |||||||||||| |||| |||||||    
T  4429518 gttcgaaccccaacccctgcatataataatgcattgtcctaccaactgagctatgctcacgg 4429579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5862187 - 5862134
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactat 54  Q
    ||||||||||| ||| || |||||||||||| |||||||| |||||||| ||||    
T  5862187 gttcgaaccccgacctctacatataacaatgcatgtccctgccaactgagctat 5862134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 9074041 - 9074000
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatac 56  Q
    ||||||||||||||||||||||||||  ||||||| ||||||    
T  9074041 ccctgcatataacaatgtatgtccctgtcaactgagctatac 9074000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 38114897 - 38114852
Alignment:
Q  21 atataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||||    
T  38114897 atataataatgtatgtccctatcaactgaactatgctcatggggac 38114852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41677119 - 41677054
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| ||||| |||||||| |||| ||||| || |||||||| |||  |||||||||||    
T  41677119 gttcgaaccccgacccccgcatataataatgaatgtctctgccaactgagctacgctcacggggac 41677054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 47645833 - 47645890
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactca 59  Q
    |||||||||| ||| ||||||||||||||| ||||| || |||||||| |||| ||||    
T  47645833 ttcgaaccccgacctctgcatataacaatgcatgtctctgccaactgagctatgctca 47645890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50575960 - 50575907
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactat 54  Q
    |||||||||||  ||| |||||||||||||| |||||||| |||||||| ||||    
T  50575960 gttcgaaccccagcccttgcatataacaatgcatgtcccttccaactgagctat 50575907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2903063 - 2903111
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    ||||||||||| ||| ||||||||||||||| ||||||||  |||||||    
T  2903063 gttcgaaccccgacctctgcatataacaatgcatgtccctggcaactga 2903111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8741535 - 8741468
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||||  |||||||||| ||  ||||| ||||||||||||||||||||  |||||||||||||    
T  8741535 gttcgaacccctgcccctgcata-aattatgtaatgtccctaccaactgaactaagctcacggggacaa 8741468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 11238065 - 11238129
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||| |||||||||||||| |||| |||||| | ||| |||| |||| |||||| ||||    
T  11238065 ttcgaaccccgacccctgcatataataatgcatgtccatgccatctgagctatgctcacgaggac 11238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19976588 - 19976656
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||||  |||||||||||||| ||  || |||||| |||||||| |||| |||||||||||||    
T  19976588 gttcgaaccccggcccctgcatataaccatacattgtccctgccaactgagctatgctcacggggacaa 19976656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39238775 - 39238707
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||||| |  ||||||||||||| |||| || |||||| |||||||| |||| |||||||||||||    
T  39238775 gttcgaacctcggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaa 39238707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 47088871 - 47088807
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    |||||||||||  ||||||||||||| |    || |||||||||||||||||| |||||||||||    
T  47088871 gttcgaaccccagcccctgcatataaaatacgatatccctaccaactgaactaaactcacgggga 47088807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47141842 - 47141890
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    |||||||| || ||||||||||||||||||| ||||||||  |||||||    
T  47141842 gttcgaactccgacccctgcatataacaatgcatgtccctgtcaactga 47141890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 10474550 - 10474614
Alignment:
Q  3 tcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |||||    
T  10474550 tcgaaccccgacccctgcatataacaatgtatgtctctaccaactgaactatgctcacgaggaca 10474614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11808097 - 11808035
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| ||| |||  ||||||||    
T  11808097 gttcgaaccccgacccctgcatataacaatgcatgtccctaccaattgagctaagctcacggg 11808035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 32814885 - 32814825
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    ||||||| || |||||||||||||| |||| ||||||||||||||||| |||| |||||||    
T  32814885 ttcgaactccgacccctgcatataataatgcatgtccctaccaactgagctatgctcacgg 32814825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43712349 - 43712397
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  43712349 gttcgaaccccgacccctgtatataacaatgcatgtccctaccaactga 43712397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 24440979 - 24441018
Alignment:
Q  29 atgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  24440979 atgtatgtccctaccaactgaactatgctcacggggacaa 24441018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 45267962 - 45268033
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaatatg 72  Q
    |||||||| || || ||||||||||| ||| |||||| || |||||||| |||| |||||||||||||||||    
T  45267962 gttcgaactccgactcctgcatataataatatatgtctctgccaactgagctatgctcacggggacaatatg 45268033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 48053207 - 48053144
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    |||||| ||| |||||| ||||||| |||||||||||||||||||| | |||| ||||||||||    
T  48053207 ttcgaatcccgacccctacatataagaatgtatgtccctaccaactaagctatgctcacgggga 48053144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1649211 - 1649145
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||   |||||||||| ||||||| || |||||||||||||| |||| ||||||||||||    
T  1649211 gttcgaaccctggcccctgcataaaacaatgcatatccctaccaactgagctatgctcacggggaca 1649145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21285389 - 21285455
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  |||||||||||||||||| | ||||||| |||||||| |||| |||||||||||    
T  21285389 gttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 21285455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35195902 - 35195836
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||  ||||||||||||| |||| |||||||| |||||||| |||| || |||||||||    
T  35195902 gttcgaaccccggcccctgcatataataatgcatgtccctgccaactgagctatgcttacggggaca 35195836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 38363201 - 38363151
Alignment:
Q  18 tgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||||||||||||||| ||| |||| |||||||| |||||||||||||    
T  38363201 tgcatataacaatgtatgttcctgccaattgaactatgctcacggggacaa 38363151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10020505 - 10020558
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactat 54  Q
    ||||||||||| ||||||||||||||||||| ||||||||  ||||||| ||||    
T  10020505 gttcgaaccccaacccctgcatataacaatgcatgtccctgtcaactgagctat 10020558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 37410529 - 37410578
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    ||||||||||||||||||| |||||| |||||||||| |||| |||||||    
T  37410529 acccctgcatataacaatgcatgtccttaccaactgagctatgctcacgg 37410578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 37917447 - 37917386
Alignment:
Q  5 gaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||| ||||||||||||||  ||| |||| |||||||||||| |||| |||||||||||    
T  37917447 gaaccccaacccctgcatataattatgcatgttcctaccaactgagctatgctcacggggac 37917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 41139145 - 41139080
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||| |||||||||||||| |||| | ||||||| |||||||| |||| |||||||||||    
T  41139145 ttcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 41139080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48175026 - 48174957
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaata 70  Q
    |||||||| ||  |||||| |||||| |||| |||||| | |||||||| ||||||||||||||||||||    
T  48175026 gttcgaacaccggcccctgtatataataatgcatgtccttgccaactgagctatactcacggggacaata 48174957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 14818405 - 14818469
Alignment:
Q  5 gaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||| |||||||||||||| |||| | ||||||| |||||||| |||| |||||||||||||    
T  14818405 gaaccccgacccctgcatataataatgcactgtccctgccaactgagctatgctcacggggacaa 14818469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 15265403 - 15265467
Alignment:
Q  5 gaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||| |||||||||||||| |||| | ||||||| |||||||| |||| |||||||||||||    
T  15265403 gaaccccgacccctgcatataataatgcactgtccctgccaactgagctatgctcacggggacaa 15265467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33236303 - 33236339
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtc 37  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33236303 gttcgaaccccaacccctgcatataacaatgtatgtc 33236339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16916516 - 16916457
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcac 60  Q
    ||||||||||| |||||| |||||| ||||| | |||||||||||||||  |||||||||    
T  16916516 gttcgaaccccgacccctacatatagcaatgcaagtccctaccaactgatgtatactcac 16916457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 38328617 - 38328660
Alignment:
Q  16 cctgcatataacaatgtatgtccctaccaactgaactatactca 59  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||    
T  38328617 cctgcatataacaatgtatgtccctaccaattgagctatgctca 38328660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7392342 - 7392408
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||| |||||| ||| ||||||||||||||| |||| ||| |||| ||| |||| ||||||||||||    
T  7392342 gttcaaaccccaacctctgcatataacaatgcatgttcctgccaattgagctatgctcacggggaca 7392408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7465525 - 7465463
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    |||||||||||  ||||||||||||| |||| ||||| || |||||||| |||| ||||||||    
T  7465525 gttcgaaccccggcccctgcatataataatgcatgtctctgccaactgagctatgctcacggg 7465463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 8766859 - 8766913
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||| |||||| |||||||| ||||||||  ||| ||||||||||||    
T  8766859 acccctgcatatgacaatgaatgtccctgccaactgagttatgctcacggggaca 8766913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15912834 - 15912768
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| ||||||||||||||||||| | ||| ||| |||| ||| |||| |||||||||||    
T  15912834 gttcgaaccccaacccctgcatataacaatgcattgttcctgccaattgagctattctcacggggac 15912768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20527465 - 20527531
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    |||||||| ||  |||||||||||||||||| | ||||||| |||||||| |||||||||| |||||    
T  20527465 gttcgaactccggcccctgcatataacaatgcattgtccctgccaactgagctatactcacagggac 20527531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 32534633 - 32534687
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||||||| |||||||||||| ||||||||  ||| |||| |||||||    
T  32534633 acccctgcatataaccatgtatgtccctgccaactgagttatgctcatggggaca 32534687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43635647 - 43635581
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||| ||| ||||||||||||||| ||||  || ||||||||  ||| ||||||||||||    
T  43635647 gttcgaaccccgaccgctgcatataacaatgcatgtttctgccaactgagttatgctcacggggaca 43635581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 17305443 - 17305492
Alignment:
Q  18 tgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||||| |||||||| |||||||| |||| ||||||| ||||    
T  17305443 tgcatataacaatgcatgtccctgccaactgagctatgctcacggagaca 17305492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23799359 - 23799298
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    ||||||| ||| ||||||||||||||||||| ||||| || ||||||||  ||||| |||||    
T  23799359 gttcgaatcccgacccctgcatataacaatgcatgtctctgccaactgagttatacccacgg 23799298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38032891 - 38032956
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  |||||| ||||||||||| |||||||| ||||||||  |||  ||||||||||    
T  38032891 gttcgaaccccggcccctgtatataacaatgcatgtccctgccaactgagttatgttcacggggac 38032956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41417311 - 41417380
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggacaat 69  Q
    ||||||||||| ||||||||||||||  ||| | ||| ||| |||||||| |||| ||||||||||||||    
T  41417311 gttcgaaccccgacccctgcatataatgatgcactgttcctgccaactgagctatgctcacggggacaat 41417380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1513546 - 1513498
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    ||||||||| | |||||| |||||||||||| |||||||| ||||||||    
T  1513546 gttcgaacctcaacccctacatataacaatgcatgtccctgccaactga 1513498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7162704 - 7162748
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaa 45  Q
    ||||||||||| ||||||||||||||||||| || ||||| ||||    
T  7162704 gttcgaaccccgacccctgcatataacaatgcatatccctgccaa 7162748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 25304225 - 25304173
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    ||||||||||||||||||  |||| ||| ||||||||||||  ||||||||||    
T  25304225 acccctgcatataacaattcatgttcctgccaactgaactacgctcacgggga 25304173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 32309185 - 32309229
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaac 46  Q
    ||||||| || ||||||||||||||||||| |||||||| |||||    
T  32309185 ttcgaactccgacccctgcatataacaatgcatgtccctgccaac 32309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33996889 - 33996953
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    ||||||||||| || ||||||||||| |    || |||||||||||||| |||||||||||||||    
T  33996889 gttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctatactcacgggga 33996953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25064705 - 25064770
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| |||||||||||||| |||| |||||| ||||||||||||||| |||||||||||    
T  25064705 gttcgaaccccaacccctgcatataataatgcatgtccataccaactgaactatgctcacggggac 25064770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30833076 - 30833011
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||| ||||||    
T  30833076 gttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgaactatgctcatggggac 30833011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10455801 - 10455736
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  |||||||||||||||||| |||| ||| ||||||||||||| |||||||||||    
T  10455801 gttcgaaccccggcccctgcatataacaatgcatgttcctgccaactgaactatgctcacggggac 10455736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 34524932 - 34524868
Alignment:
Q  3 tcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||  |||||||||||||||||| |||||||| |||||||| |||| ||||||||||||    
T  34524932 tcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 34524868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 4844197 - 4844136
Alignment:
Q  6 aacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||  |||||||| |||||||    
T  4844197 aaccccgacccctgcatataacaatgcatgtccctgccaactgagttatactcatggggaca 4844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6455512 - 6455447
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||| | ||||||| |||||||||||||||||||||||||||  ||||||||||    
T  6455512 gttcgaaccccagcccatacatataataatgtatgtccctaccaactgaactatgttcacggggac 6455447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 2945651 - 2945587
Alignment:
Q  5 gaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||| ||||||||||||||||||| || |||||| |||||||| |||| |||||||||||||    
T  2945651 gaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggacaa 2945587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 20858420 - 20858467
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  20858420 ttcgaaccccaacccctgcatataacaatgcatgtccctgccaactga 20858467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26669695 - 26669760
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||||| |||||||  ||| ||||||||||||||||| |||| |||||||||||    
T  26669695 gttcgaaccccagcccctacatataattatgcatgtccctaccaactgagctatgctcacggggac 26669760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5544335 - 5544287
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    ||||||||||| ||||||||||||||||||  ||||||||| |||||||    
T  5544335 gttcgaaccccgacccctgcatataacaatacatgtccctatcaactga 5544287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 7228900 - 7228857
Alignment:
Q  25 aacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||| || |||||||||||||| |||||||||||||||||    
T  7228900 aacaatgtttgcccctaccaactgaaatatactcacggggacaa 7228857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 9031811 - 9031760
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||||||||| |||||||| |||||||| ||||  ||||||||||    
T  9031811 ccctgcatataacaatgcatgtccctgccaactgagctatgttcacggggac 9031760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9064925 - 9064858
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||| ||||||||||||    
T  9064925 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 9064858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18631531 - 18631472
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcac 60  Q
    ||||||| ||| ||||||||||||||||||||||   |||||||||||| |||| |||||    
T  18631531 gttcgaatcccgacccctgcatataacaatgtattgtcctaccaactgagctatgctcac 18631472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 22850869 - 22850810
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacg 61  Q
    |||||||||| |||||||||||||| ||||||| | ||||| |||||| |||| ||||||    
T  22850869 ttcgaaccccaacccctgcatataataatgtattttcctactaactgagctatgctcacg 22850810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9443499 - 9443565
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||| ||| |||| | |||||||||||| |||||| || ||||||| |||| ||||||||||||    
T  9443499 gttcgaatcccgacccatacatataacaatgcatgtccgtatcaactgagctatgctcacggggaca 9443565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14981738 - 14981804
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||| |||||||||||    
T  14981738 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 14981804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2955140 - 2955205
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||| ||||||  ||||||||||||| |||| ||||||||  || ||||||||| |||||||||||    
T  2955140 gttcaaacccctgcccctgcatataataatgcatgtccctggcatctgaactatgctcacggggac 2955205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 22730752 - 22730805
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||||||||||||| ||||| || ||||||||  ||| |||||||||||||    
T  22730752 ccctgcatataacaatgcatgtctctgccaactgagttatgctcacggggacaa 22730805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3448411 - 3448343
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||||  ||||||| |||||||||| || |||||| |||| ||| |||| |||||||||||||    
T  3448411 gttcgaaccccggcccctgcgtataacaatgcattgtccctgccaattgagctatgctcacggggacaa 3448343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8253626 - 8253674
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    |||||||||||  |||||||||||||||||| |||||| | ||||||||    
T  8253626 gttcgaaccccagcccctgcatataacaatgcatgtccatgccaactga 8253674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 10442943 - 10442883
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    |||||||||| |||||| ||||||||||||||| || ||| |||||||  ||| |||||||    
T  10442943 ttcgaaccccaacccctacatataacaatgtatatctctatcaactgagttatgctcacgg 10442883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 17305562 - 17305510
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||||| |||| |||||||||||||||||  |||  ||||||||||    
T  17305562 cccctgcatataataatgcatgtccctaccaactgagttatgttcacggggac 17305510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18904327 - 18904257
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatg--tatgtccctaccaactgaactatactcacggggacaata 70  Q
    ||||||||||| |||||||||||||| ||||  | |||||||||||||||| | |  |||||||||||||||    
T  18904327 gttcgaaccccgacccctgcatataa-aatgcatttgtccctaccaactgagcaaagctcacggggacaata 18904257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 24319043 - 24319011
Alignment:
Q  33 atgtccctaccaactgaactatactcacgggga 65  Q
    ||||||||||||||||||||| |||||||||||    
T  24319043 atgtccctaccaactgaactaaactcacgggga 24319011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39432364 - 39432431
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||||||| |||||||||||||||| || |||||||| |||||||| |||| |||||||||||||    
T  39432364 gttcgaaccccaacccctgcatataacattgcatgtccctgccaactgagctatgctcacggggacaa 39432431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 14012670 - 14012603
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||||||  |||||||||||||||||| || |||||| ||||||||||||| |||||||||||||    
T  14012670 ttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgaactatgctcacggggacaa 14012603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 216184 - 216250
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||| |||||||||||||||||||||||| |||||||| |||| |||||||| ||||    
T  216184 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 216250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 692744 - 692810
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||| |||||||||||||||||||||||| |||||||| |||| |||||||| ||||    
T  692744 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 692810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 696953 - 697019
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||| |||||||||||||||||||||||| |||||||| |||| |||||||| ||||    
T  696953 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 697019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 729807 - 729873
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||| |||||||||||||||||||||||| |||||||| |||| |||||||| ||||    
T  729807 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 729873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 853702 - 853768
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||| |||||||||||||||||||||||| |||||||| |||| |||||||| ||||    
T  853702 ttcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 853768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29937269 - 29937203
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||| ||  |||||||||||||||||  ||||||||||||||||| |||| ||||||||||||    
T  29937269 gttcgaactccggcccctgcatataacaatacatgtccctaccaactgagctatgctcacggggaca 29937203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32940350 - 32940416
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||| || ||||||| ||||||||||| ||||||||  ||||||| |||||||||||||||||    
T  32940350 gttcgaactccgacccctgtatataacaatgcatgtccctgtcaactgagctatactcacggggaca 32940416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14011074 - 14011139
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||| ||  |||||||||||||||||| |||||||| ||||||||||||| ||||| |||||    
T  14011074 gttcgaactccggcccctgcatataacaatgcatgtccctgccaactgaactatgctcacagggac 14011139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 26657915 - 26657851
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    |||||||||||   ||||||||||||||||| ||||||||||||||||| |||| ||||| ||||    
T  26657915 gttcgaaccccggtccctgcatataacaatgcatgtccctaccaactgagctatgctcacaggga 26657851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 28979073 - 28979021
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    |||||| |||||||||||| ||||||||| |||||||||||| ||||||||||    
T  28979073 acccctacatataacaatgcatgtccctatcaactgaactatgctcacgggga 28979021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 36593252 - 36593192
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    |||||||||| ||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||    
T  36593252 ttcgaaccccaacctctgtatataacaatgcatgtccctaccaactgagctatacttacgg 36593192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18123920 - 18123854
Alignment:
Q  1 gttcgaacccccacccctgca-tataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| ||||||||| ||||||||||||| |||||  ||| |||||||| |||||||||||    
T  18123920 gttcgaaccccaacccctgcaatataacaatgtatatccctgtcaattgaactatgctcacggggac 18123854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6325329 - 6325263
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||| |||||| ||||||||||||||  ||||||||||||| |||||| | ||| |||||||||||||    
T  6325329 gttcaaaccccaacccctgcatataattatgtatgtccctatcaactg-agtatgctcacggggacaa 6325263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 220399 - 220465
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||| |||||||||||| || |||||||| |||||||| |||| |||||||| ||||    
T  220399 ttcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatgctcacgggaacaa 220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 689554 - 689620
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||| |||||||||||| || |||||||| |||||||| |||| |||||||| ||||    
T  689554 ttcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatgctcacgggaacaa 689620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 734022 - 734088
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||| |||||||||||| || |||||||| |||||||| |||| |||||||| ||||    
T  734022 ttcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatgctcacgggaacaa 734088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 857918 - 857984
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||  ||| |||||||||||| || |||||||| |||||||| |||| |||||||| ||||    
T  857918 ttcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatgctcacgggaacaa 857984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2800078 - 2800012
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||| |||||||||||    
T  2800078 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 2800012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4798577 - 4798639
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    |||||||||||  ||||||||||||| |||| ||   |||||||||||| |||||||||||||    
T  4798577 gttcgaaccccggcccctgcatataataatgcattatcctaccaactgagctatactcacggg 4798639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12560090 - 12560033
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactca 59  Q
    ||||||||||| |||||||||||||||||||| ||| ||| |||||||| |||| ||||    
T  12560090 gttcgaaccccaacccctgcatataacaatgt-tgttcctgccaactgagctatgctca 12560033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22847298 - 22847344
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaact 47  Q
    ||||||||| | ||||||||||||||||||| |||||||| ||||||    
T  22847298 gttcgaacctcgacccctgcatataacaatgcatgtccctgccaact 22847344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25119267 - 25119205
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| |||||||||||||| |||| ||   |||||||| |||||||| ||||||||    
T  25119267 gttcgaaccccaacccctgcatataataatgcattgtcctaccaattgaactatgctcacggg 25119205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33982249 - 33982183
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgt-atgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| |||||||||||||||||||| ||||  ||  ||||||| |||| |||||||||||    
T  33982249 gttcgaaccccgacccctgcatataacaatgtaatgtttctgtcaactgagctatgctcacggggac 33982183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43468741 - 43468803
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| |||||| |||||||||||| ||   |||||||||||| |||| ||||||||    
T  43468741 gttcgaaccccgacccctacatataacaatgcattgtcctaccaactgagctatgctcacggg 43468803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 2801747 - 2801800
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||||| |||| ||||| || |||||| || |||||||||||||||||    
T  2801747 ccctgcatataataatgaatgtctctcccaactaaaatatactcacggggacaa 2801800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6372639 - 6372700
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    |||||||||||  |||||||||||||  ||| |||||||| |||||||| |||| |||||||    
T  6372639 gttcgaaccccaccccctgcatataattatgcatgtccctgccaactgagctatcctcacgg 6372700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 18577168 - 18577107
Alignment:
Q  5 gaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||| ||||||||||||||||||  ||||||||  |||||||  ||| |||||||||||    
T  18577168 gaaccccgacccctgcatataacaatacatgtccctgtcaactgagttatgctcacggggac 18577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43554508 - 43554455
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactat 54  Q
    ||||||||||| |||||| |||||||||||| ||||| || |||||||| ||||    
T  43554508 gttcgaaccccaacccctacatataacaatggatgtcgctgccaactgagctat 43554455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43774244 - 43774177
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||| ||||||||||||||||||| | ||||||| |||||||| |||||||||||||||||    
T  43774244 gttcgaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatactcacggggaca 43774177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4045670 - 4045729
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcac 60  Q
    ||||||||| | ||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  4045670 gttcgaacctcgacccctgcatataacaatgcatgtccctgtcaactgaactatactcac 4045729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24130618 - 24130551
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||| ||||||  ||||||||||||||||||||||||||| ||||||||  ||| |||||||||||||    
T  24130618 gttcaaaccccgtcccctgcatataacaatgtatgtccctgccaactgagttatgctcacggggacaa 24130551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16874226 - 16874292
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||| |  |||||||||||||||||| |||||||| |||||||| |||| ||||||||||||    
T  16874226 gttcgaacctcggcccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 16874292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 3973348 - 3973300
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||||    
T  3973348 cccctgcatataacaatgcatgtccctaccaactgagctatgctcacgg 3973300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 3996528 - 3996576
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||||    
T  3996528 cccctgcatataacaatgcatgtccctaccaactgagctatgctcacgg 3996576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 51412027 - 51412079
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactat 54  Q
    |||||||||| || |||||||||||||||| |||||||| |||||||||||||    
T  51412027 ttcgaaccccgactcctgcatataacaatgcatgtccctgccaactgaactat 51412079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9625042 - 9624971
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaatat 71  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||| ||||||||||||||||    
T  9625042 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaatat 9624971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 4010067 - 4010113
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcac 60  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||    
T  4010067 cccctgcatataacaatgcatgtccctaccaactgagctatgctcac 4010113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51017849 - 51017791
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactca 59  Q
    |||||||| || || |||||||||||||||| |||||||| |||||||| |||||||||    
T  51017849 gttcgaactccgactcctgcatataacaatgcatgtccctgccaactgagctatactca 51017791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12712028 - 12711971
Alignment:
Q  1 gttcgaaccccc-acccctgcatataacaatgtatgtccctaccaactgaactatact 57  Q
    |||||||| ||| |||||||||||||| |||| |||| ||||||||||||||||||||    
T  12712028 gttcgaactcccgacccctgcatataaaaatgcatgttcctaccaactgaactatact 12711971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19137678 - 19137613
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||| |  |||||||||||||||||| |||| ||| |||||||| |||| |||||||||||    
T  19137678 gttcgaacctcggcccctgcatataacaatgcatgttcctgccaactgagctatgctcacggggac 19137613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24160564 - 24160632
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaat 69  Q
    ||||||||||| |||||||||||||||| || ||||| || ||||||||  ||| |||||| |||||||    
T  24160564 gttcgaaccccgacccctgcatataacagtgcatgtctctgccaactgagttatgctcacgaggacaat 24160632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27183717 - 27183785
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||| |||||||||||||    
T  27183717 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaa 27183785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34407126 - 34407174
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    ||||||||||| |||||||||||||| |||| |||||||| ||||||||    
T  34407126 gttcgaaccccaacccctgcatataataatgcatgtccctgccaactga 34407174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 41767816 - 41767872
Alignment:
Q  13 acccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||||||||||||||| || || ||| ||||||||||||| |||||||||||||    
T  41767816 acccctgcatataacaatgcattgttcctgccaactgaactatgctcacggggacaa 41767872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13540000 - 13540062
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| |||||| ||||||| |||| ||   |||||||||||| |||||||||||||    
T  13540000 gttcgaaccccaacccctacatataataatgcattgtcctaccaactgagctatactcacggg 13540062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14868744 - 14868678
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||| |||||||||||    
T  14868744 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 14868678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16277987 - 16278049
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||| ||| |||||||||||||| |||| |||  |||||||||||| |||| ||||||||    
T  16277987 gttcgaatcccgacccctgcatataataatgcatggtcctaccaactgagctatgctcacggg 16278049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42271049 - 42271111
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    |||||||||||  |||||||||||||||||| ||   |||||||||||| |||| ||||||||    
T  42271049 gttcgaaccccggcccctgcatataacaatgcattgtcctaccaactgagctatgctcacggg 42271111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 44592047 - 44591997
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||||||||||| |||| |||||||||||| |||  ||||||||    
T  44592047 acccctgcatataacaatgcatgttcctaccaactgagctaagctcacggg 44591997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3461760 - 3461821
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    ||||||||||| |||||| |||||||||||| ||||||||  |||||||  ||| |||||||    
T  3461760 gttcgaaccccaacccctacatataacaatgcatgtccctgtcaactgagttatgctcacgg 3461821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 12236646 - 12236593
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||||| |||| |||||||| |||||||| |||  |||||||||||    
T  12236646 acccctgcatataataatgcatgtccctgccaactgagctacgctcacggggac 12236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31576570 - 31576509
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacg 61  Q
    |||||| |||| ||||||||||||||||||| | ||| |||||||||||| |||| ||||||    
T  31576570 gttcgagccccaacccctgcatataacaatgcattgttcctaccaactgagctatgctcacg 31576509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 4478405 - 4478469
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||| |||||||||||||| |||| |||| | ||| |||||| |||| ||||| |||||    
T  4478405 ttcgaaccccgacccctgcatataataatgcatgttcatactaactgagctatgctcacagggac 4478469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6284936 - 6284868
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaat 69  Q
    ||||||||||| |||||||  | ||| |||| |||||||| ||||||||| ||| |||||| |||||||    
T  6284936 gttcgaaccccgacccctgtgtgtaataatgcatgtccctgccaactgaattatgctcacgaggacaat 6284868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 21142771 - 21142815
Alignment:
Q  3 tcgaacccccacccctgcatataacaatgtatgtccctaccaact 47  Q
    |||||||||  |||||||||||||||||| | |||||||||||||    
T  21142771 tcgaaccccggcccctgcatataacaatgcacgtccctaccaact 21142815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35541041 - 35540993
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    ||||||||||| |||||| ||||||| |||| || ||||||||||||||    
T  35541041 gttcgaaccccaacccctacatataaaaatgcatatccctaccaactga 35540993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45871079 - 45871015
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    ||||||||||| |||||||||||||| |    || |||||||||||||| ||| |||||||||||    
T  45871079 gttcgaaccccgacccctgcatataatatacaatatccctaccaactgagctaaactcacgggga 45871015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 34070 - 34136
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||| |||| |||||||||||||    
T  34070 ttcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggacaa 34136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9963475 - 9963409
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| ||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||    
T  9963475 gttcgaaccccaacccctgcatataacaatgcattgtccctgccaactgagctatactcacggggac 9963409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7147055 - 7147120
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| |||||||||||||| |||| |||||| |||||||||| |||| |||||||||||    
T  7147055 gttcgaaccccgacccctgcatataataatgcatgtccttaccaactgagctatgctcacggggac 7147120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3535972 - 3536037
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  | |||| ||||||||||| |||||||| ||||||||||||| |||||||||||    
T  3535972 gttcgaaccccggctcctgtatataacaatgcatgtccctgccaactgaactatgctcacggggac 3536037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38040325 - 38040260
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||| | ||||||||||||||||||| |||||||| |||||||| |||| |||| ||||||    
T  38040325 gttcgaacctcgacccctgcatataacaatgcatgtccctgccaactgagctatgctcatggggac 38040260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 11246537 - 11246597
Alignment:
Q  8 cccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaa 68  Q
    |||| ||||||||||||||||||| |||||||| |||||||| |||| ||||||| |||||    
T  11246537 ccccgacccctgcatataacaatgcatgtccctgccaactgagctatgctcacggtgacaa 11246597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13862184 - 13862116
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaat 69  Q
    |||||||| || ||||||||||||||||||| || ||| |  |||||||||||| ||||||||||||||    
T  13862184 gttcgaactccgacccctgcatataacaatgcatatccatgtcaactgaactatgctcacggggacaat 13862116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40250213 - 40250281
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaat 69  Q
    ||||||||||| || |||||||||||||||| ||||  || |||||||| |||| ||||||||||||||    
T  40250213 gttcgaaccccgactcctgcatataacaatgcatgttactgccaactgagctatgctcacggggacaat 40250281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25660971 - 25660901
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaatat 71  Q
    ||||||| |||  |||||||||||||||||| || ||||| |||||||| |||| ||||||||||| ||||    
T  25660971 gttcgaatcccggcccctgcatataacaatgcatatccctgccaactgagctatgctcacggggacgatat 25660901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42781630 - 42781684
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactata 55  Q
    ||||||||||| | ||||||||||||||||| |||||||| |||||||| |||||    
T  42781630 gttcgaaccccgaaccctgcatataacaatgcatgtccctgccaactgagctata 42781684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27006399 - 27006334
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| ||||| ||||||||||||| ||| |||| ||| |||| |||| |||||||||||    
T  27006399 gttcgaaccccgaccccagcatataacaatgcatgcccctgccatctgacctatgctcacggggac 27006334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 31907698 - 31907646
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    ||||||||||||||||||| |||||||| | |||||| ||||| |||||||||    
T  31907698 acccctgcatataacaatgcatgtccctgcaaactgacctatattcacgggga 31907646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6806676 - 6806743
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||| ||| ||||||||||||||||||| | |||| || |||||||| |||| ||||||||||||    
T  6806676 gttcgaatcccgacccctgcatataacaatgcattgtctctgccaactgagctatgctcacggggaca 6806743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 35813291 - 35813342
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcacgggga 65  Q
    |||||||||||||||||| ||||||||  ||||||| |||| ||||||||||    
T  35813291 cccctgcatataacaatgcatgtccctgtcaactgagctatgctcacgggga 35813342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37303993 - 37303926
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||| |||||||||||||| |||  || |||||| |||||||| |||| ||||||||||||    
T  37303993 gttcgaaccccgacccctgcatataataatacattgtccctgccaactgagctatgctcacggggaca 37303926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 38040130 - 38040181
Alignment:
Q  3 tcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactat 54  Q
    ||||||||| | ||||||||||||||||| |||||| | |||||||||||||    
T  38040130 tcgaaccccgaaccctgcatataacaatgcatgtccttgccaactgaactat 38040181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41405124 - 41405183
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcac 60  Q
    |||| |||||| |||| |||||||||||||| ||||||||  |||||||||||| |||||    
T  41405124 gttccaaccccgacccttgcatataacaatgcatgtccctgtcaactgaactatgctcac 41405183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4985818 - 4985752
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||| ||||||  ||||||||||| ||||| |||| ||||||  |||||| |||||||||    
T  4985818 gttcgaaccccgacccctatatataacaatgcatgtctctacaaactgagttatacttacggggaca 4985752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18872580 - 18872518
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| |||||||||||||| |||| ||   |||||||||||| |||| ||||||||    
T  18872580 gttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagctatgctcacggg 18872518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 31004182 - 31004232
Alignment:
Q  17 ctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||| |||||||||||||||||||||||| |||  ||| ||||||||||||    
T  31004182 ctgcctataacaatgtatgtccctaccaattgagttatgctcacggggaca 31004232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36742003 - 36742065
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| | ||||||||||||||||  ||||| || |||||||| |||| ||||||||    
T  36742003 gttcgaaccccgatccctgcatataacaattcatgtctctgccaactgagctatgctcacggg 36742065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19608672 - 19608607
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| |||||||||||||| |||| || | |||| ||||||| |||| |||| ||||||    
T  19608672 gttcgaaccccgacccctgcatataataatgcatattcctatcaactgagctatgctcatggggac 19608607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 28768644 - 28768603
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactat 54  Q
    |||| ||||||| |||||| ||||||||||||||||||||||    
T  28768644 acccttgcatatgacaatgcatgtccctaccaactgaactat 28768603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31556877 - 31556812
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||| || ||||||||||||||||||| |||||||| | || ||| |||| || ||||||||    
T  31556877 gttcgaactccgacccctgcatataacaatgcatgtccctgctaagtgagctatgctaacggggac 31556812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 38361531 - 38361482
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| |||||||||||||||  ||||||| |||| ||||||||    
T  38361531 cccctgcatatcacaatgtatgtccctgtcaactgagctatgctcacggg 38361482  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 20186920 - 20186864
Alignment:
Q  6 aacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    |||||| |||||||||||||| |||| |||||||| |||||||| | || |||||||    
T  20186920 aaccccgacccctgcatataataatgcatgtccctgccaactgagcaatgctcacgg 20186864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 39955047 - 39955011
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactga 49  Q
    |||||||| |||||||||| |||||||||||||||||    
T  39955047 acccctgcgtataacaatgcatgtccctaccaactga 39955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27921955 - 27921893
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    |||||||||||  ||||||||||||| |||| ||||||||||||||||| |||| ||||||||    
T  27921955 gttcgaaccccggcccctgcatataataatgcatgtccctaccaactgagctatgctcacggg 27921893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37728998 - 37728932
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||| | |||||||||||||| |||| || ||||||||||||||||||| ||||| ||||||    
T  37728998 gttcgaacctcgacccctgcatataataatgcatatccctaccaactgaactatgctcacagggaca 37728932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41492534 - 41492600
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||  ||||||||||||| |||| |||||||| |||||||| |||| ||||||||||||    
T  41492534 gttcgaaccccggcccctgcatataataatgcatgtccctgccaactgagctatgctcacggggaca 41492600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 49039481 - 49039547
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||   ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||    
T  49039481 gttcgaaccccagtccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 49039547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 52556711 - 52556777
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||| ||||  |||| ||||||    
T  52556711 gttcgaaccccgacccctgcatataacaatgtatgttcctatcaactgagctatgttcactgggaca 52556777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 15185132 - 15185072
Alignment:
Q  6 aacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||| ||||||||||||||||||| || ||||| ||||| ||||||| |||||||||||    
T  15185132 aaccccgacccctgcatataacaatgcatatccctgccaaccgaactatgctcacggggac 15185072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 39293579 - 39293519
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgg 62  Q
    |||||||||| ||||||||||||||  ||| ||||||||||||||||| |||| |||||||    
T  39293579 ttcgaaccccaacccctgcatataattatgcatgtccctaccaactgagctatgctcacgg 39293519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9062235 - 9062172
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacgggg 64  Q
    ||||||||||| |||| ||||||||| |||| |||||||| |||||| |||||| |||||||||    
T  9062235 gttcgaaccccaacccttgcatataataatgcatgtccctgccaactaaactatgctcacgggg 9062172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20610798 - 20610739
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcac 60  Q
    |||||||||||  |||||||||||||||||| |||||||| |||||||| |||| |||||    
T  20610798 gttcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagctatgctcac 20610739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13211388 - 13211450
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| |||| ||||||||| |||| ||   ||||||||||||||||||||||||||    
T  13211388 gttcgaaccccgacccatgcatataataatgcattgtcctaccaactgaactatactcacggg 13211450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29785209 - 29785143
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||  ||||| ||||| ||| ||||||||||| |||||||| |||| ||||||||||||    
T  29785209 gttcgaaccccagcccctacatattacagtgtatgtccctgccaactgagctatgctcacggggaca 29785143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36008334 - 36008268
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  |||||||||||||||||| | ||||||| |||||||| |||| |||||||||||    
T  36008334 gttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 36008268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 38657585 - 38657531
Alignment:
Q  15 ccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaat 69  Q
    ||||||||||||||||| |||||||| |||||||| | || ||||||||||||||    
T  38657585 ccctgcatataacaatgcatgtccctgccaactgagccatgctcacggggacaat 38657531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 48968246 - 48968312
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||||||||||||| |||| || |||||| ||||||||||||| |||||||||||    
T  48968246 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgaactatgctcacggggac 48968312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 54854215 - 54854281
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||  |||||||||||||  ||| |||||||| |||||||| |||| ||||||||||||    
T  54854215 gttcgaaccccagcccctgcatataattatgcatgtccctgccaactgagctatgctcacggggaca 54854281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 12796712 - 12796655
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaatat 71  Q
    ||||||||||||||||||||||| ||| ||||||||  ||| ||||||||||| ||||    
T  12796712 cccctgcatataacaatgtatgttcctgccaactgagttatgctcacggggactatat 12796655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20166375 - 20166310
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||| |  |||||||||||||||||| |||||||| |||||||| |||  |||||||||||    
T  20166375 gttcgaacctcggcccctgcatataacaatgcatgtccctgccaactgagctacgctcacggggac 20166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42432067 - 42432019
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    ||||||||||| | ||||||||||||||||| |||||||| ||||||||    
T  42432067 gttcgaaccccaatccctgcatataacaatgcatgtccctgccaactga 42432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 48512245 - 48512189
Alignment:
Q  14 cccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaat 69  Q
    |||||||||||||||||| || |||||| |||||||| |||| ||||||||||||||    
T  48512245 cccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggacaat 48512189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 49319448 - 49319380
Alignment:
Q  5 gaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggacaatatgt 73  Q
    ||||||| |||||||||||||| |||| |||||| | |||||||| |||| |||||| |||| ||||||    
T  49319448 gaaccccgacccctgcatataataatgcatgtccatgccaactgagctatgctcacgaggaccatatgt 49319380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 2942242 - 2942183
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacg 61  Q
    |||||||||| ||||||  ||||||||||||||||| || ||||||||| ||| ||||||    
T  2942242 ttcgaaccccaacccctaaatataacaatgtatgtctctgccaactgaattatgctcacg 2942183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33076589 - 33076529
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| |||||||||||||| |||| |||||||  |||||||| |||| ||||||||    
T  33076589 gttcgaaccccgacccctgcatataataatgcatgtccc--ccaactgagctatgctcacggg 33076529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 53815755 - 53815688
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||| ||||||||||||    
T  53815755 gttcgaaccccagcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 53815688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9924915 - 9924853
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| |||||||||||||| ||||  |   ||||||||||||||||| ||||||||    
T  9924915 gttcgaaccccgacccctgcatataataatgcgttgtcctaccaactgaactatgctcacggg 9924853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12820441 - 12820507
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    |||| |||||| ||||||||||||||||||| | |||| || |||||||| |||| |||||||||||    
T  12820441 gttctaaccccgacccctgcatataacaatgcattgtctctgccaactgagctatgctcacggggac 12820507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15853881 - 15853815
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    |||||||||||  |||||| ||||||||||| |||| ||| ||||||||| ||| ||||||| ||||    
T  15853881 gttcgaaccccagcccctgtatataacaatgcatgttcctgccaactgaattatgctcacggagaca 15853815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18497451 - 18497413
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccc 39  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  18497451 gttcgaaccccaacccctgcatataacaatgcatgtccc 18497413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28520767 - 28520833
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||| |||||||||||    
T  28520767 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 28520833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33359876 - 33359810
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||| | |||| |||||||||||||| |||||| |  ||||||| |||| ||||||||||||    
T  33359876 gttcgaacctcgacccttgcatataacaatgaatgtccatgtcaactgagctatgctcacggggaca 33359810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35909199 - 35909261
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    ||||||||||| ||| |||||||||| |||||||   |||||||||||||||||  |||||||    
T  35909199 gttcgaaccccgacctctgcatataataatgtattgtcctaccaactgaactatgttcacggg 35909261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40150532 - 40150466
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| ||||||| |||||| |||| || || ||| ||||||||||||| |||||||||||    
T  40150532 gttcgaaccccgacccctgtatataataatgcattgttcctgccaactgaactatgctcacggggac 40150466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42411490 - 42411556
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||| ||||||||||||||  ||| | ||||||| |||||||| |||| |||||||||||    
T  42411490 gttcgaaccccgacccctgcatataattatgcattgtccctgccaactgagctatgctcacggggac 42411556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 49743421 - 49743355
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||| |||  ||||||||||||| |||| || ||||| ||||||||||||| ||| ||||||||    
T  49743421 gttcgaatcccggcccctgcatataataatgcatatccctgccaactgaactatgctcgcggggaca 49743355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 2565319 - 2565254
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    ||||||| || ||||||||||||||||||| | |||||||  ||||||| |||| |||||||||||    
T  2565319 ttcgaactccgacccctgcatataacaatgcattgtccctgtcaactgagctatgctcacggggac 2565254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35230331 - 35230384
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactat 54  Q
    ||||||||||| |||| |||||||| ||||| || |||||||||||||| ||||    
T  35230331 gttcgaaccccgacccatgcatatagcaatgcatatccctaccaactgagctat 35230384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44272995 - 44272942
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactat 54  Q
    |||||||| || |||||||||||||| |||| |||||| |||||||| ||||||    
T  44272995 gttcgaactccgacccctgcatataataatgcatgtccataccaactaaactat 44272942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9084818 - 9084750
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggacaa 68  Q
    ||||||| ||| ||||||||||||||||||| | ||||||| |||||||| |||| |||| || |||||    
T  9084818 gttcgaatcccgacccctgcatataacaatgcattgtccctgccaactgagctatgctcatggagacaa 9084750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9693021 - 9692953
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatg-tccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||||  ||||||||||||| |||| ||  ||||| |||||||| |||| |||||||||||||    
T  9693021 gttcgaaccccggcccctgcatataataatgcattatccctgccaactgagctatgctcacggggacaa 9692953  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14149852 - 14149784
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggacaa 68  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| ||||  ||||||||||||    
T  14149852 gttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatggtcacggggacaa 14149784  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16336511 - 16336571
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacg 61  Q
    ||||||||||| |||||| |||||||||||| |||| ||| | |||| |||||| ||||||    
T  16336511 gttcgaaccccaacccctacatataacaatgcatgttcctgcaaacttaactatgctcacg 16336571  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37997882 - 37997930
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactga 49  Q
    |||||||||||   ||||||||||||||||| |||||||| ||||||||    
T  37997882 gttcgaaccccagaccctgcatataacaatgaatgtccctgccaactga 37997930  T

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Target: scaffold0712 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 4567 - 4513
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||||||||||| |||||||| |||||||| |||| ||||||| ||||    
T  4567 acccctgcatataacaatgcatgtccctgccaactgagctatgctcacggagaca 4513  T

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Target: scaffold0709 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 4587 - 4533
Alignment:
Q  13 acccctgcatataacaatgtatgtccctaccaactgaactatactcacggggaca 67  Q
    ||||||||||||||||||| |||||||| |||||||| |||| ||||||| ||||    
T  4587 acccctgcatataacaatgcatgtccctgccaactgagctatgctcacggagaca 4533  T

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Target: scaffold0112 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17967 - 18033
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  |||||||||||||||||| | |||||||||||| ||| |||| |||||||||||    
T  17967 gttcgaaccccagcccctgcatataacaatgcattgtccctaccaattgagctatgctcacggggac 18033  T

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Target: scaffold0119 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1098 - 1033
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||||| |||||||  ||| ||||||||||||||||| |||| |||||||||||    
T  1098 gttcgaaccccagcccctacatataattatgcatgtccctaccaactgagctatgctcacggggac 1033  T

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Target: scaffold0247 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 20765 - 20729
Alignment:
Q  18 tgcatataacaatgtatgtccctaccaactgaactat 54  Q
    ||||||||||||||||||||||| |||||||||||||    
T  20765 tgcatataacaatgtatgtccctgccaactgaactat 20729  T

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Target: scaffold0308 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7135 - 7069
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||||||||||||| |||| || ||||||| ||||||| |||| |||||||||||    
T  7135 gttcgaaccccggcccctgcatataataatgcattgtccctaacaactgagctatgctcacggggac 7069  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25085 - 25019
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtat-gtccctaccaactgaactatactcacggggac 66  Q
    |||||||||||  ||||||||||||| |||| || |||||| |||||||| |||| |||||||||||    
T  25085 gttcgaaccccagcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 25019  T

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Target: scaffold2098 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 650 - 715
Alignment:
Q  2 ttcgaacccccacccctgcatataacaatgta-tgtccctaccaactgaactatactcacggggac 66  Q
    ||||||| || |||||| |||||||||||| | ||||||| |||||||| |||||||||| |||||    
T  650 ttcgaactccaacccctacatataacaatgcattgtccctgccaactgagctatactcacagggac 715  T

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Target: scaffold1808 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 885 - 934
Alignment:
Q  17 ctgcatataacaatgtatgtccctaccaactgaactatactcacggggac 66  Q
    ||||||||||||||||||||||||  |||||||  ||| |||||||||||    
T  885 ctgcatataacaatgtatgtccctgacaactgagttatgctcacggggac 934  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 37377 - 37426
Alignment:
Q  14 cccctgcatataacaatgtatgtccctaccaactgaactatactcacggg 63  Q
    |||||| ||| ||||||| ||||||||||||||||| |||| ||||||||    
T  37377 cccctgtataaaacaatgcatgtccctaccaactgagctatgctcacggg 37426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4382 - 4322
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacg 61  Q
    ||||||||||| |||||||||||||| |||||||   |||| ||||||| |||| ||||||    
T  4382 gttcgaaccccgacccctgcatataataatgtattgtcctatcaactgagctatgctcacg 4322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 56349 - 56289
Alignment:
Q  1 gttcgaacccccacccctgcatataacaatgtatgtccctaccaactgaactatactcacg 61  Q
    ||||||||||| |||||| |||||||||||| |||| ||| | |||| |||||| ||||||    
T  56349 gttcgaaccccaacccctacatataacaatgcatgttcctgcaaacttaactatgctcacg 56289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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