View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0740_low_148 (Length: 251)
Name: NF0740_low_148
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0740_low_148 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 98 - 251
Target Start/End: Original strand, 5897481 - 5897634
Alignment:
| Q |
98 |
ataaaagatcgacaagatatagaaacaataaaacaaacgtaagcagtaataaaaatgttcaaacaaatcaattaattaagatcacgcaaacaaatgggaa |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5897481 |
ataaaagatcgacaagatatagaaacaataaaacaaacgtaagcagtaataaaaatgttcaaacaaatcaattaattaagatcacgcaaacaaatgggaa |
5897580 |
T |
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| Q |
198 |
ccaacttgaagtaaagtcacgaaaaacctttgctctaagggctagtgaagtcac |
251 |
Q |
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| T |
5897581 |
ccaacttgaagtaaagtcacgaaaaacctttgctctaagggctagtgaagtcac |
5897634 |
T |
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