View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0740_low_153 (Length: 250)
Name: NF0740_low_153
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0740_low_153 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 6643826 - 6644043
Alignment:
| Q |
1 |
cttggattccctctaatagaagtttcatggaataatgaaccttaaccaatgctgatttcagaatctaacgagtcaagttaaagtataccattaataaatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6643826 |
cttggattccctctaatagaagtttcacggaataatgaaccttaaccaatgctgatttcagaatctaacgagtcaagttaaagtataccattaataaatt |
6643925 |
T |
|
| Q |
101 |
atttttaaaggatcttagccactaatttaatatgactgccaaggtttgtaatcgggtcacacatttgaagtagggaatccatttccatatccatagctct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6643926 |
atttttaaaggatcttagccactaatttaatatgactgccaaggtttgtaatcgggtcacacatttgaagtagggaatccatttccatatccatagctct |
6644025 |
T |
|
| Q |
201 |
agaaaactcctagaaagt |
218 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
6644026 |
agaaaactcctagaaagt |
6644043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 3484 times since January 2019
Visitors: 4814