View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0740_low_99 (Length: 315)
Name: NF0740_low_99
Description: NF0740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0740_low_99 |
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Alignment Details
Target: chr1 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 45649572 - 45649707
Alignment:
| Q |
53 |
ttttttagcgtgtctttccatcgattataaggcttgtttgttggtctagtgttccttgtttgattgtctttgttataagttgtgaatttgactctcagac |
152 |
Q |
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| T |
45649572 |
ttttttagtgtgtctttccatcgattataaggcttgtttgttggtctagtgtttcttgtttgattatctttgttataagttgtgaatttgactctcagac |
45649671 |
T |
|
| Q |
153 |
cgccttctctatctcattttctccctccctccctcc |
188 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
45649672 |
cgccttctctatctcattttctccctccctccctcc |
45649707 |
T |
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