View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0742_low_13 (Length: 256)

Name: NF0742_low_13
Description: NF0742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0742_low_13
NF0742_low_13
[»] chr1 (37 HSPs)
chr1 (30-256)||(6770178-6770404)
chr1 (30-98)||(29210412-29210480)
chr1 (30-97)||(38162850-38162917)
chr1 (30-100)||(18043159-18043229)
chr1 (30-98)||(29657770-29657838)
chr1 (30-97)||(5694321-5694388)
chr1 (30-100)||(30657605-30657675)
chr1 (30-100)||(47009990-47010060)
chr1 (30-100)||(51065867-51065937)
chr1 (30-103)||(12072181-12072254)
chr1 (30-99)||(42770109-42770178)
chr1 (30-99)||(47532789-47532857)
chr1 (30-98)||(19031934-19032002)
chr1 (30-98)||(45431278-45431345)
chr1 (38-101)||(12306914-12306977)
chr1 (30-97)||(17333401-17333467)
chr1 (30-97)||(24178582-24178649)
chr1 (30-101)||(51368904-51368975)
chr1 (34-99)||(15227737-15227802)
chr1 (30-98)||(13961211-13961278)
chr1 (30-65)||(39497339-39497374)
chr1 (30-108)||(10976021-10976099)
chr1 (30-64)||(15282633-15282667)
chr1 (30-96)||(19011115-19011180)
chr1 (30-99)||(29683193-29683263)
chr1 (34-99)||(9266851-9266916)
chr1 (30-99)||(14350396-14350465)
chr1 (30-95)||(38702052-38702117)
chr1 (38-90)||(48383238-48383290)
chr1 (30-97)||(3784832-3784899)
chr1 (34-97)||(28481844-28481907)
chr1 (30-97)||(30294500-30294567)
chr1 (30-64)||(3097692-3097726)
chr1 (38-99)||(28726032-28726094)
chr1 (30-64)||(50128291-50128325)
chr1 (30-99)||(35985740-35985808)
chr1 (30-98)||(48071482-48071549)
[»] chr6 (26 HSPs)
chr6 (30-110)||(12525706-12525786)
chr6 (30-104)||(3515759-3515833)
chr6 (30-99)||(1391297-1391365)
chr6 (34-99)||(7851282-7851347)
chr6 (30-99)||(20897946-20898015)
chr6 (34-99)||(23402136-23402201)
chr6 (30-103)||(27433486-27433559)
chr6 (30-97)||(392096-392163)
chr6 (30-97)||(21878466-21878533)
chr6 (30-97)||(23629695-23629761)
chr6 (30-95)||(2350654-2350719)
chr6 (30-97)||(12145236-12145303)
chr6 (34-97)||(29978233-29978295)
chr6 (37-102)||(32929634-32929699)
chr6 (30-99)||(34396646-34396715)
chr6 (30-98)||(13529454-13529522)
chr6 (30-98)||(29451234-29451301)
chr6 (30-100)||(18276734-18276803)
chr6 (30-99)||(4215693-4215762)
chr6 (30-99)||(14559920-14559989)
chr6 (30-98)||(31280320-31280388)
chr6 (30-73)||(13417081-13417124)
chr6 (30-73)||(34477669-34477712)
chr6 (30-64)||(26467243-26467277)
chr6 (30-87)||(32985312-32985369)
chr6 (56-97)||(34712271-34712312)
[»] chr2 (26 HSPs)
chr2 (30-99)||(31390010-31390079)
chr2 (30-100)||(561637-561707)
chr2 (30-99)||(30486208-30486277)
chr2 (30-98)||(32360988-32361056)
chr2 (30-99)||(34442651-34442719)
chr2 (30-97)||(8969526-8969591)
chr2 (30-98)||(22887749-22887817)
chr2 (30-98)||(26891782-26891850)
chr2 (34-97)||(20552931-20552994)
chr2 (28-99)||(22068436-22068507)
chr2 (30-97)||(31438646-31438713)
chr2 (30-97)||(44587902-44587969)
chr2 (30-99)||(26387183-26387252)
chr2 (30-102)||(2898067-2898138)
chr2 (30-90)||(4381802-4381862)
chr2 (30-99)||(27856515-27856584)
chr2 (30-99)||(38590993-38591062)
chr2 (30-98)||(6580188-6580256)
chr2 (29-95)||(16807342-16807409)
chr2 (29-95)||(16846623-16846690)
chr2 (34-97)||(38296178-38296240)
chr2 (30-97)||(43637165-43637231)
chr2 (30-64)||(5881250-5881284)
chr2 (30-71)||(5093658-5093699)
chr2 (34-99)||(32860100-32860165)
chr2 (67-108)||(35851925-35851966)
[»] chr8 (34 HSPs)
chr8 (30-100)||(168463-168533)
chr8 (30-99)||(27988618-27988687)
chr8 (30-99)||(28045920-28045989)
chr8 (30-98)||(43119216-43119284)
chr8 (30-104)||(13643005-13643079)
chr8 (30-104)||(13743430-13743504)
chr8 (30-99)||(4537863-4537932)
chr8 (30-99)||(4648193-4648261)
chr8 (30-97)||(16394180-16394247)
chr8 (30-97)||(30675691-30675758)
chr8 (30-88)||(29444259-29444317)
chr8 (30-99)||(10618016-10618085)
chr8 (30-95)||(20831672-20831737)
chr8 (30-99)||(33357248-33357317)
chr8 (30-98)||(11112638-11112706)
chr8 (29-89)||(36923781-36923841)
chr8 (30-97)||(12652630-12652697)
chr8 (34-97)||(34228682-34228745)
chr8 (30-99)||(9063171-9063239)
chr8 (30-107)||(16785077-16785153)
chr8 (30-64)||(7304637-7304671)
chr8 (30-96)||(16888663-16888728)
chr8 (30-84)||(42035100-42035154)
chr8 (30-99)||(9278210-9278279)
chr8 (30-74)||(16890599-16890643)
chr8 (30-90)||(32113915-32113975)
chr8 (30-70)||(36730471-36730511)
chr8 (30-97)||(2805379-2805446)
chr8 (30-97)||(37373206-37373272)
chr8 (30-64)||(9537943-9537977)
chr8 (30-96)||(21595848-21595913)
chr8 (30-64)||(40831310-40831344)
chr8 (37-97)||(39751597-39751658)
chr8 (30-98)||(3930352-3930419)
[»] chr3 (30 HSPs)
chr3 (30-100)||(18014669-18014739)
chr3 (30-99)||(40362699-40362768)
chr3 (30-98)||(272219-272287)
chr3 (30-101)||(52520677-52520748)
chr3 (30-100)||(46352631-46352701)
chr3 (34-98)||(41304004-41304068)
chr3 (30-98)||(49893330-49893398)
chr3 (30-97)||(4168183-4168250)
chr3 (30-97)||(20923992-20924059)
chr3 (30-97)||(39074419-39074486)
chr3 (30-97)||(43786871-43786938)
chr3 (30-99)||(858587-858656)
chr3 (34-97)||(48725271-48725334)
chr3 (30-97)||(52246582-52246649)
chr3 (30-99)||(11308329-11308398)
chr3 (30-99)||(13159895-13159964)
chr3 (29-73)||(22248910-22248954)
chr3 (32-76)||(49529390-49529434)
chr3 (30-90)||(50395681-50395741)
chr3 (29-97)||(51818993-51819061)
chr3 (30-104)||(53489943-53490019)
chr3 (30-90)||(41554059-41554118)
chr3 (30-97)||(10617403-10617469)
chr3 (30-88)||(42964368-42964426)
chr3 (30-88)||(43269858-43269916)
chr3 (30-64)||(52718200-52718234)
chr3 (37-97)||(2362801-2362861)
chr3 (30-74)||(2391630-2391674)
chr3 (30-74)||(2393391-2393435)
chr3 (30-74)||(29241660-29241704)
[»] chr5 (19 HSPs)
chr5 (30-103)||(13661802-13661875)
chr5 (37-97)||(6283562-6283622)
chr5 (30-97)||(10069969-10070036)
chr5 (30-101)||(35132518-35132589)
chr5 (30-99)||(19647777-19647846)
chr5 (32-100)||(13470148-13470216)
chr5 (30-97)||(35504359-35504426)
chr5 (30-96)||(2619676-2619742)
chr5 (37-99)||(10054478-10054540)
chr5 (30-108)||(34650952-34651029)
chr5 (30-106)||(12506287-12506363)
chr5 (37-100)||(21944986-21945050)
chr5 (30-97)||(11958086-11958153)
chr5 (30-99)||(8787337-8787406)
chr5 (30-99)||(39069379-39069447)
chr5 (30-65)||(40057339-40057374)
chr5 (30-103)||(40564523-40564594)
chr5 (34-99)||(4837256-4837320)
chr5 (30-90)||(11846079-11846139)
[»] chr4 (32 HSPs)
chr4 (30-103)||(4089136-4089209)
chr4 (30-99)||(43944505-43944574)
chr4 (30-100)||(15186240-15186310)
chr4 (30-104)||(16536041-16536115)
chr4 (30-103)||(18067998-18068071)
chr4 (34-99)||(43202506-43202571)
chr4 (30-97)||(54897308-54897375)
chr4 (30-100)||(789649-789719)
chr4 (30-107)||(52533904-52533981)
chr4 (30-98)||(4268941-4269009)
chr4 (30-90)||(50619093-50619153)
chr4 (34-98)||(55882683-55882746)
chr4 (30-97)||(32217045-32217112)
chr4 (30-100)||(7768935-7769005)
chr4 (30-100)||(29591186-29591256)
chr4 (30-100)||(47231991-47232061)
chr4 (30-99)||(33108792-33108860)
chr4 (30-97)||(3783620-3783687)
chr4 (30-97)||(24679761-24679827)
chr4 (30-97)||(28755621-28755687)
chr4 (30-104)||(42898865-42898939)
chr4 (30-99)||(12356242-12356311)
chr4 (34-98)||(49915158-49915222)
chr4 (30-97)||(4220195-4220262)
chr4 (30-97)||(32202599-32202666)
chr4 (30-97)||(54054548-54054615)
chr4 (56-98)||(10110147-10110189)
chr4 (30-96)||(19503224-19503289)
chr4 (30-76)||(30154282-30154327)
chr4 (30-64)||(52697085-52697119)
chr4 (30-74)||(54655995-54656039)
chr4 (30-74)||(54945897-54945941)
[»] scaffold0524 (1 HSPs)
scaffold0524 (30-97)||(825-892)
[»] scaffold0003 (1 HSPs)
scaffold0003 (30-103)||(53804-53877)
[»] scaffold0045 (1 HSPs)
scaffold0045 (30-97)||(50548-50615)
[»] chr7 (25 HSPs)
chr7 (30-97)||(24438477-24438544)
chr7 (34-97)||(34606261-34606324)
chr7 (30-100)||(29993606-29993676)
chr7 (34-96)||(47656981-47657043)
chr7 (30-99)||(12218555-12218624)
chr7 (29-90)||(28262038-28262099)
chr7 (34-99)||(34333282-34333347)
chr7 (30-98)||(5239284-5239352)
chr7 (30-100)||(4628563-4628633)
chr7 (34-99)||(18485959-18486024)
chr7 (30-99)||(24798522-24798590)
chr7 (30-97)||(1736980-1737047)
chr7 (30-76)||(30810676-30810722)
chr7 (30-100)||(34546433-34546503)
chr7 (30-102)||(22973593-22973665)
chr7 (30-98)||(23357826-23357894)
chr7 (32-96)||(28587911-28587974)
chr7 (30-97)||(8754704-8754771)
chr7 (42-97)||(47118095-47118150)
chr7 (42-104)||(7689331-7689393)
chr7 (30-99)||(5729344-5729413)
chr7 (30-90)||(11686443-11686503)
chr7 (56-88)||(19434502-19434534)
chr7 (30-98)||(27456232-27456299)
chr7 (30-98)||(47839492-47839559)
[»] scaffold0264 (1 HSPs)
scaffold0264 (34-99)||(22959-23024)
[»] scaffold0014 (1 HSPs)
scaffold0014 (30-99)||(68409-68478)
[»] scaffold0188 (1 HSPs)
scaffold0188 (30-96)||(6229-6295)
[»] scaffold0021 (1 HSPs)
scaffold0021 (30-99)||(116202-116271)
[»] scaffold0002 (1 HSPs)
scaffold0002 (30-99)||(147024-147093)
[»] scaffold1266 (1 HSPs)
scaffold1266 (30-98)||(292-359)
[»] scaffold0674 (1 HSPs)
scaffold0674 (30-73)||(8016-8059)
[»] scaffold0549 (1 HSPs)
scaffold0549 (30-73)||(7312-7355)
[»] scaffold0190 (1 HSPs)
scaffold0190 (30-97)||(14896-14963)
[»] scaffold0050 (1 HSPs)
scaffold0050 (30-73)||(69250-69293)
[»] scaffold1152 (1 HSPs)
scaffold1152 (30-98)||(677-745)


Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 30 - 256
Target Start/End: Complemental strand, 6770404 - 6770178
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaattattgtcgaactttaatatcaaatt 129  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6770404 taactactatataatttcctttttcatatccttaattagtgccccggaggcaccggttagccattccctttaaattattgtcgaactttaatatcaaatt 6770305  T
Q  130 aaactatcatttcccttttatttaattgataccaattttcatcccttgcttgtgaagagctttaacatggttctgaaaatgcatttttggacggtataaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6770304 aaactatcatttcccttttatttaattgataccaattttcatcccttgcttgtgaagagctttaacatggttctgaaaatgcatttttggacggtataaa 6770205  T
Q  230 tatgaattatggttaagtatattttca 256  Q
    |||||||||||||||||||||||||||    
T  6770204 tatgaattatggttaagtatattttca 6770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 29210480 - 29210412
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||| |||||||    
T  29210480 taactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 38162917 - 38162850
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||| | ||||||    
T  38162917 taactactatataattttctttttcatacccttaaccagtgccccggaggcaccggttaacatttccc 38162850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 18043229 - 18043159
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||| ||| ||||||  |||||||||||||||||||||||| |||||||||    
T  18043229 taactactatataatttccttttttatacccttaaccagtgccccggaggcaccggttagcatttcccttt 18043159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 29657838 - 29657770
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||| ||||||||||  |||||||||| ||||||||||||| |||||||    
T  29657838 taactactatataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttccct 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 5694388 - 5694321
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| | |||| ||||||||||  |||||||||||||||||||||||| ||||||    
T  5694388 taactactatataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 30657675 - 30657605
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    |||||||||||||||||  |||||||||| ||||| |||||||||||  |||||||||||| |||||||||    
T  30657675 taactactatataatttcttttttcatatgcttaactagtgccccgggagcaccggttagcatttcccttt 30657605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 47010060 - 47009990
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||||||||||  ||||| ||||| |||||| ||||| |||||||||    
T  47010060 taactactatataatttcctttttcatatccttaaccagtgctccggatgcaccgattagcatttcccttt 47009990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 51065867 - 51065937
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||||||||||  |||| ||||| | ||||||||||| |||||||||    
T  51065867 taactactatataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttcccttt 51065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 12072181 - 12072254
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 103  Q
    ||||||||| ||||||| |||||||||||||||||   ||||||||| ||||||||||||| ||| ||||||||    
T  12072181 taactactacataatttcctttttcatatccttaaccggtgccccgggggcaccggttagcattttcctttaaa 12072254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 42770109 - 42770178
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||| | ||||  |||||||||| ||||||||||||| ||||||||    
T  42770109 taactactatataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttccctt 42770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 47532789 - 47532857
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||||||||||||||||||||||||||||||||  ||| | |||||| ||||||||||| ||||||||    
T  47532789 taactactatataattttctttttcatatccttaa-cagtactccggagacaccggttagcatttccctt 47532857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 19031934 - 19032002
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| ||||||||||||||||| || |||||| |  |||||||||||| |||||||    
T  19031934 taactactatataatttcctttttcatatccttaactaatgcccccggagcaccggttagcatttccct 19032002  T

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Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 45431345 - 45431278
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||||||||||||||| || |||| || ||||||||||||| |||||||    
T  45431345 taactactatataatttcctttttcatatccttaatcag-gccctgggggcaccggttagcatttccct 45431278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 12306977 - 12306914
Alignment:
Q  38 atataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttta 101  Q
    ||||||||||||||||| |||| |||| ||| ||||| ||||||||||||||| ||||||||||    
T  12306977 atataattttctttttcgtatcattaactagagccccagaggcaccggttagcatttcccttta 12306914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 17333401 - 17333467
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||||||||  |||| ||||| ||||||||||||| ||||||    
T  17333401 taactactatataatttcctttttcatatccttaaccagtg-cccgggggcaccggttagcatttccc 17333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 24178582 - 24178649
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||| |||||||||| |||||||||||||||||  |||||||||| |||| |||||||| ||||||    
T  24178582 taactattatataatttcctttttcatatccttaaccagtgccccgggggcatcggttagcatttccc 24178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 51368904 - 51368975
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttta 101  Q
    ||||||||||||||||| |||||||||| ||||||  ||| ||| ||||| |||||||||| ||||||||||    
T  51368904 taactactatataatttcctttttcatacccttaaccagtaccctggaggtaccggttagcatttcccttta 51368975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 15227802 - 15227737
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||| |||||||||||||||||  |||||||| | || |||||||||| ||||||||    
T  15227802 tactatataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttccctt 15227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 13961278 - 13961211
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||||||||||||||| ||||| ||||||||||   ||||||||| ||||||||||||| |||||||    
T  13961278 taactactatataatttttttttt-atatccttaacccgtgccccgggggcaccggttagcatttccct 13961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 39497374 - 39497339
Alignment:
Q  30 taactactatataattttctttttcatatccttaat 65  Q
    ||||||||||||||||||||||||||||||||||||    
T  39497374 taactactatataattttctttttcatatccttaat 39497339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 10976021 - 10976099
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaattatt 108  Q
    ||||||||||||||| | |||||||||||||||||  |||||| | ||| |||||| |||| ||||| ||| |||||||    
T  10976021 taactactatataatctcctttttcatatccttaacaagtgcctcagagacaccggctagcatttcctttttaattatt 10976099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 15282633 - 15282667
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    |||||||||||||||||||||||||||||||||||    
T  15282633 taactactatataattttctttttcatatccttaa 15282667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 19011115 - 19011180
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 96  Q
    ||||||||||||||||| |||||||||||||||||   ||||||||| | ||||||||||| |||||    
T  19011115 taactactatataatttcctttttcatatccttaacccgtgccccgg-gacaccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 29683263 - 29683193
Alignment:
Q  30 taactactatataattttctttttc-atatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| ||||||  ||||| ||||  |||||||||| ||||||||||||| ||||||||    
T  29683263 taactactatataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 9266851 - 9266916
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||| |||||||||||||||||  |||||| ||| | ||||||||| | ||||||||    
T  9266851 tactatataatttcctttttcatatccttaaccagtgccgcggggacaccggttaacatttccctt 9266916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 14350396 - 14350465
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||| ||||||||| |||||||||| ||||||   |||| |||| ||||||||||||| ||||||||    
T  14350396 taactacaatataatttcctttttcatacccttaaccggtgctccgggggcaccggttagcatttccctt 14350465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 38702052 - 38702117
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 95  Q
    ||||||||||||| ||| |||||||||| ||||||  ||||||||||  |||||||||||| ||||    
T  38702052 taactactatatagtttcctttttcatacccttaaccagtgccccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 48383238 - 48383290
Alignment:
Q  38 atataattttctttttcatatccttaattagtgccccggaggcaccggttagc 90  Q
    |||||||||||||||||| ||||||||  ||||||||||  ||||||||||||    
T  48383238 atataattttctttttcacatccttaaccagtgccccgggagcaccggttagc 48383290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 3784832 - 3784899
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||||||||  ||||| | || ||||||| || || ||||||    
T  3784832 taactactatataatttcctttttcatatccttaaccagtgcactgggggcaccgatttgcatttccc 3784899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 28481907 - 28481844
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||| |||||||| |||||||||||||||||  || ||||  ||||||||||||||| ||||||    
T  28481907 tactgtataatttcctttttcatatccttaaccagggcccaagaggcaccggttagcatttccc 28481844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 30294500 - 30294567
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||||||||  | ||| |||| | ||||| ||||| ||||||    
T  30294500 taactactatataatttcctttttcatatccttaaccaatgctccggggacaccgattagcatttccc 30294567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 3097726 - 3097692
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    ||||||||||||||||| |||||||||||||||||    
T  3097726 taactactatataatttcctttttcatatccttaa 3097692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 28726032 - 28726094
Alignment:
Q  38 atataattttctttttcat-atccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||| |||||| || ||||||||  |||||||||| ||||||||||||| ||||||||    
T  28726032 atataatttccttttttattatccttaaccagtgccccgggggcaccggttagcatttccctt 28726094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 50128291 - 50128325
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    |||||||||| ||||||||||||||||||||||||    
T  50128291 taactactatgtaattttctttttcatatccttaa 50128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 35985740 - 35985808
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||| ||||||||||  ||||  |||| ||||||||||| | ||||||||    
T  35985740 taactactatataatttccttttttatatccttaaacagtgatccgg-ggcaccggttaacatttccctt 35985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 48071549 - 48071482
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||| |||||||||| ||||| |||||||||||  ||| ||||||| ||| |||||||| |||||||    
T  48071549 taactattatataatttccttttacatatccttaaccagtaccccgga-gcatcggttagcatttccct 48071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 12525786 - 12525706
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaattattgt 110  Q
    ||||||||||||||||| |||||||||| ||||||  ||| |||||||||||||||||||| |||||||||||||||||||    
T  12525786 taactactatataatttcctttttcatacccttaaccagtaccccggaggcaccggttagcatttccctttaaattattgt 12525706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 3515833 - 3515759
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaat 104  Q
    ||||||||||||||||| |||||||||| ||||||  ||||||| || ||||||||||||| |||||||||||||    
T  3515833 taactactatataatttcctttttcatacccttaaccagtgccctgggggcaccggttagcatttccctttaaat 3515759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 1391297 - 1391365
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||| ||||||||    
T  1391297 taactactatataatttcctttttcatatccttaatcagtaccccgga-gcaccggttagcatttccctt 1391365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 7851282 - 7851347
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||| ||||||||    
T  7851282 tactatataattttctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 20898015 - 20897946
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| || ||||||||||||| ||||||||    
T  20898015 taactactatataatttcctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 20897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 23402201 - 23402136
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||| ||||||||    
T  23402201 tactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccctt 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 27433559 - 27433486
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 103  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||| ||||    
T  27433559 taactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctataaa 27433486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 392163 - 392096
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||    
T  392163 taactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 21878466 - 21878533
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||||||||   |||||| |||||||||||||||| ||||||    
T  21878466 taactactatataatttcctttttcatatccttaacccgtgcccgggaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 23629695 - 23629761
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||| | ||||||    
T  23629695 taactactatataattttctttttcatatccttaatcagtgccccgg-ggcatcggttaacatttccc 23629761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 2350719 - 2350654
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 95  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||  |||||||||||| ||||    
T  2350719 taactactatataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 12145236 - 12145303
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||||||||  ||||| | || ||||||||||||| ||||||    
T  12145236 taactactatataatttcctttttcatatccttaacaagtgcactgggggcaccggttagcatttccc 12145303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 29978295 - 29978233
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||| ||||||||||||||||| |||||  |||||||||||||||||| ||||||    
T  29978295 tactatataatttcctttttcatatccttaactagtg-tccggaggcaccggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 32929634 - 32929699
Alignment:
Q  37 tatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaa 102  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||||||||||||| |||||||||||    
T  32929634 tatataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttccctttaa 32929699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 34396646 - 34396715
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||   ||| || || ||||||||||||| ||||||||    
T  34396646 taactactatataatttcctttttcatatccttaacctgtgtcctgggggcaccggttagcatttccctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 13529522 - 13529454
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||||| ||||||||  ||||||||| ||||||  |||||| |||||||    
T  13529522 taactactatataatttcctttttcacatccttaaccagtgccccgaaggcacaagttagcatttccct 13529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 29451234 - 29451301
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||||||||||||||   ||| |||||||||||| |||||| |||||||    
T  29451234 taactactatataatttcctttttcatatccttaaccggtg-cccggaggcaccagttagcatttccct 29451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 18276734 - 18276803
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| || |||||| |||| | |||||||||    
T  18276734 taactactatataatttcctttttcatatccttaaccagtgcccagg-ggcaccagttaacatttcccttt 18276803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 4215762 - 4215693
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||| |||||||||| ||||||||||  |||||  |||||||||| ||||||||||| | ||||||||    
T  4215762 taactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctt 4215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 14559989 - 14559920
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||| |||||| |||  ||||||||||| ||||| ||| ||||| |||||||||||||| ||||||||    
T  14559989 taactattatatattttcttttttcatatctttaatcagttccccgaaggcaccggttagcatttccctt 14559920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 31280388 - 31280320
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||||||   |||||| |||||| |||  |||||||||||| |||||||    
T  31280388 taactactatataatttcctttttcattctcttaatcagtgcctcgggagcaccggttagcatttccct 31280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 13417081 - 13417124
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccc 73  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||    
T  13417081 taactaatatataatttcctttttcatatccttaactagtgccc 13417124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 34477669 - 34477712
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccc 73  Q
    ||||||||||||||||| |||||||||||||||||  |||||||    
T  34477669 taactactatataatttcctttttcatatccttaaccagtgccc 34477712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 26467243 - 26467277
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    ||||||||||||||||| |||||||||||||||||    
T  26467243 taactactatataatttcctttttcatatccttaa 26467277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 32985312 - 32985369
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggtt 87  Q
    ||||||||||||||||| |||||| ||||||||||  | |||||||  ||||||||||    
T  32985312 taactactatataatttccttttttatatccttaaccaatgccccgagggcaccggtt 32985369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 34712271 - 34712312
Alignment:
Q  56 tatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||  |||||||||||||||||||||||| ||||||    
T  34712271 tatccttaaccagtgccccggaggcaccggttagcatttccc 34712312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 31390079 - 31390010
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  31390079 taactactatataatttcctttttcatatccttaactagtgccccggaggcaccagttagcatttccctt 31390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 561637 - 561707
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||| |||||||||    
T  561637 taactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcccttt 561707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 30486277 - 30486208
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||| |||||| |||||| ||||||||    
T  30486277 taactactatataatttcctttttcatatccttaaccagtgccccgggggcaccagttagcatttccctt 30486208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 32360988 - 32361056
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||| ||||||||||||||||||| ||||||||  |||||||||| ||||||||||||| |||||||    
T  32360988 taactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 34442651 - 34442719
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||| |||||||||||||||||||   ||||||||| ||||||||||||| ||||||||    
T  34442651 taactactatataatcttctttttcatatccttaacatgtgccccgg-ggcaccggttagcatttccctt 34442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 8969526 - 8969591
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  | ||||| ||||||| ||||||    
T  8969526 taactactatataattttctttttcatatccttaactagtgccc--ggggcactggttagcatttccc 8969591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 22887817 - 22887749
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||||||||||||||  ||||||||||||||||  | ||||||||||||| |||||||| |||||||    
T  22887817 taactactatataatttcttttttcatatccttaaccactgccccggaggcatcggttagcatttccct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 26891782 - 26891850
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||| |||||||||| |||||| ||||||||||| |||| ||||| ||||||||||||| |||||||    
T  26891782 taactaatatataatttccttttttatatccttaatcagtgtcccgggggcaccggttagcatttccct 26891850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 20552994 - 20552931
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||| ||||||    
T  20552994 tactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 22068436 - 22068507
Alignment:
Q  28 cataactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||||  |||||||||||||||||  |||||||||| |||||  |||||| ||||||||    
T  22068436 cataactactatataattccctttttcatatccttaaccagtgccccgggggcacttgttagcatttccctt 22068507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 31438713 - 31438646
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||| |||||||| |||||||||||||||||  ||||||||||  |||||||||||| ||||||    
T  31438713 taactactgtataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 44587969 - 44587902
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||| ||||||||||   ||||||||| ||||||||||||| ||||||    
T  44587969 taactactatataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 26387183 - 26387252
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||  ||| |  |||||||||| |||||| ||||||||    
T  26387183 taactactatataatttcctttttcatatccttaacaagtacttcggaggcaccagttagcatttccctt 26387252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 2898138 - 2898067
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaa 102  Q
    |||||||||||||||||||||||||||||||||||  ||||  |||| | ||||||||| | |||||||||||    
T  2898138 taactactatataattttctttttcatatccttaaccagtgttccgg-gacaccggttaacatttccctttaa 2898067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 4381862 - 4381802
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 90  Q
    ||||||||||||||||| |||||||||| ||||||  ||||| |||| |||||||||||||    
T  4381862 taactactatataatttcctttttcatacccttaaccagtgcaccgggggcaccggttagc 4381802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 27856515 - 27856584
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||| |||||||||| ||||||||||  |||||  |||||||||| ||||||||||| | ||||||||    
T  27856515 taactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctt 27856584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 38590993 - 38591062
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||||| |||||||| ||||||||||| |||||  |||||||| | | ||||||||||| ||||||||    
T  38590993 taactactgtataatttcctttttcatattcttaaccagtgccccagggacaccggttagcatttccctt 38591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 6580256 - 6580188
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||| ||| |||||||||| ||||||  |||||||| | ||||| ||||||| |||||||    
T  6580256 taactactatatagtttcctttttcatacccttaaccagtgcccccggggcactggttagcatttccct 6580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 16807342 - 16807409
Alignment:
Q  29 ataactactatataattttcttttt-catatccttaattagtgccccggaggcaccggttagcctttc 95  Q
    |||||||||||||||||||||||||  | ||||||||  | |||| ||||||||||||||||| ||||    
T  16807342 ataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 16846623 - 16846690
Alignment:
Q  29 ataactactatataattttcttttt-catatccttaattagtgccccggaggcaccggttagcctttc 95  Q
    |||||||||||||||||||||||||  | ||||||||  | |||| ||||||||||||||||| ||||    
T  16846623 ataactactatataattttctttttaaacatccttaaccaatgcctcggaggcaccggttagcatttc 16846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 38296240 - 38296178
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||||||||||||||||||| ||||  ||||||||  || ||||||||||| ||||||    
T  38296240 tactatataattttctttttcatatctttaaccagtgcccc-aagacaccggttagcatttccc 38296178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 43637231 - 43637165
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| ||| |||||||||||||  |||| | ||| ||||||||||||| ||||||    
T  43637231 taactactatataatttccttattcatatccttaaccagtgtctcgg-ggcaccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 5881284 - 5881250
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    ||||||||||||||||| |||||||||||||||||    
T  5881284 taactactatataatttcctttttcatatccttaa 5881250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 5093658 - 5093699
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgc 71  Q
    |||||||||| |||||| ||||||||||||||||| ||||||    
T  5093658 taactactatttaatttcctttttcatatccttaactagtgc 5093699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 32860165 - 32860100
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||| |||||| ||||||||||   ||||||| | ||||||||||| | ||||||||    
T  32860165 tactatataatttccttttttatatccttaacccgtgcccccggggcaccggttaacatttccctt 32860100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 35851925 - 35851966
Alignment:
Q  67 agtgccccggaggcaccggttagcctttccctttaaattatt 108  Q
    |||||||||| ||||||||||||| |||||||| ||||||||    
T  35851925 agtgccccgggggcaccggttagcatttcccttaaaattatt 35851966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 168533 - 168463
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||| |||||||||    
T  168533 taactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 27988618 - 27988687
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||| |||||||||| |||||||||||||||||  |||||||||||||||||||||||| ||||||||    
T  27988618 taactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 28045920 - 28045989
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||| |||||||||| |||||||||||||||||  |||||||||||||||||||||||| ||||||||    
T  28045920 taactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 43119284 - 43119216
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||| |||||||    
T  43119284 taactactatataattttctttttcatatctttaatcagtgccccgagggcaccggttagcatttccct 43119216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 13643079 - 13643005
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaat 104  Q
    ||||||||||||||||| ||||||| |||||||||  |||||||||| ||||||||||||| ||| |||||||||    
T  13643079 taactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttcctttaaat 13643005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 13743504 - 13743430
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaat 104  Q
    ||||||||||||||||| ||||||| |||||||||  |||||||||| ||||||||||||| ||| |||||||||    
T  13743504 taactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttcctttaaat 13743430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 4537863 - 4537932
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| || ||| ||||||||||  |||||||||||||||||||||||| ||||||||    
T  4537863 taactactatataatttcctattttatatccttaaccagtgccccggaggcaccggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 4648261 - 4648193
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||| ||||||||    
T  4648261 taactactatataatttcctttttcatatccttaatcagtgccccgg-gacaccggttagcatttccctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 16394180 - 16394247
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||| ||||||||||||||||||| ||||||||  |||||||||| ||||||||||||| ||||||    
T  16394180 taactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 30675691 - 30675758
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||    
T  30675691 taactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 29444259 - 29444317
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggtta 88  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||  ||||||||||    
T  29444259 taactactatataatttcctttttcatatccttaatcagtgccccgggagcaccggtta 29444317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 10618085 - 10618016
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||||||||||||||||||||||||||||||||   ||||||  ||||||||||||||| ||| ||||    
T  10618085 taactactatataattttctttttcatatccttaacctgtgccctagaggcaccggttagcattttcctt 10618016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 20831672 - 20831737
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttc 95  Q
    ||||||||||||||||| |||||||||||||||||  |||| ||||| ||||||||||||| ||||    
T  20831672 taactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 33357248 - 33357317
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||  ||||| |||| |||||| |||||| ||||||||    
T  33357248 taactactatataatttcctttttcatatccttaaccagtgctccgggggcaccagttagcatttccctt 33357317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 11112706 - 11112638
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||||||||||||||  |||| |||||| ||||| |||||| |||||||    
T  11112706 taactactatataatttcctttttcatatccttaaccagtgtcccggatgcaccagttagcatttccct 11112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 36923781 - 36923841
Alignment:
Q  29 ataactactatataattttctttttcatatccttaattagtgccccggaggcaccggttag 89  Q
    ||||||| |||||||||| |||||||||||||||||| |||||| |||||||| |||||||    
T  36923781 ataactattatataatttcctttttcatatccttaatcagtgcctcggaggcagcggttag 36923841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 12652697 - 12652630
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||||||||  ||||| || | ||||||||||||| ||||||    
T  12652697 taactactatataatttcctttttcatatccttaaccagtgctccaggggcaccggttagcatttccc 12652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 34228745 - 34228682
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||| ||||||    
T  34228745 tactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 9063171 - 9063239
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||  ||||| |||| | ||||||||||| ||||||||    
T  9063171 taactactatataatttcctttttcatatccttaaccagtgctccgg-gacaccggttagcatttccctt 9063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 16785153 - 16785077
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaattat 107  Q
    ||||| |||||||||||  ||||||||||||||||  ||||||| ||| |||||||||||| |||||||| |||||||    
T  16785153 taactgctatataatttcttttttcatatccttaaccagtgccctgga-gcaccggttagcatttcccttaaaattat 16785077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 7304637 - 7304671
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    |||||||||||||||||||||||||||||||||||    
T  7304637 taactactatataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 16888663 - 16888728
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 96  Q
    ||||||||||||||||| |||||||||||||||||   ||| ||||| ||||||||||||| |||||    
T  16888663 taactactatataatttcctttttcatatccttaacctgtg-cccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 42035100 - 42035154
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccg 84  Q
    ||||||||||||||||| |||||||||||||||||  ||||| |||| |||||||    
T  42035100 taactactatataatttcctttttcatatccttaaccagtgctccgggggcaccg 42035154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 9278279 - 9278210
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||| |||||||||| |||||||||||| ||||  |||| ||| |||||||| |||||| ||||||||    
T  9278279 taactattatataatttcctttttcatatctttaacgagtgtccctgaggcaccagttagcatttccctt 9278210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 16890599 - 16890643
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgcccc 74  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||    
T  16890599 taactactatataatttcctttttcatatccttaactggtgcccc 16890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 32113975 - 32113915
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 90  Q
    ||||||||||||||||| |||||||||||||||||  | | | |||||| |||||||||||    
T  32113975 taactactatataatttcctttttcatatccttaaccaatactccggagacaccggttagc 32113915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 36730511 - 36730471
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtg 70  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  36730511 taactactatataatttcctttttcatatccttaactagtg 36730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 2805379 - 2805446
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||| |||||||||| |||||||||||||||||  |||| ||||| ||||| ||||| | ||||||    
T  2805379 taactattatataatttcctttttcatatccttaaccagtgtcccgggggcactggttaacatttccc 2805446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 37373272 - 37373206
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||| |||||||||| |||||||||||||||||  ||||  |||| ||||||||||||| ||||||    
T  37373272 taactattatataatttcctttttcatatccttaaccagtg-tccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 9537943 - 9537977
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    ||||||||||||||||| |||||||||||||||||    
T  9537943 taactactatataatttcctttttcatatccttaa 9537977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 21595913 - 21595848
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 96  Q
    ||||| ||||||||||| |||||||||| ||||||  |||| ||||| ||||||||||||| |||||    
T  21595913 taactcctatataatttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 40831344 - 40831310
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    |||||||||||||||||||||||||||||| ||||    
T  40831344 taactactatataattttctttttcatatctttaa 40831310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 39751597 - 39751658
Alignment:
Q  37 tatataattttctttttcat-atccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||||| |||| || ||||||||  |||||||||| ||||||||||||| ||||||    
T  39751597 tatataattttcctttttattatccttaaccagtgccccgggggcaccggttagcatttccc 39751658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 3930352 - 3930419
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| || ||||||||  |||| ||||| ||||| ||||||| ||||| |||||||    
T  3930352 taactactatataatttcctctttcatattattaactagtg-cccgggggcaccgattagcatttccct 3930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 18014739 - 18014669
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| |||||| |||||| |||||||||    
T  18014739 taactactatataatttactttttcatatccttaatcagtgccccgggggcaccagttagcatttcccttt 18014669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 40362699 - 40362768
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  40362699 taactactatataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 272287 - 272219
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||| |||||||    
T  272287 taactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 52520748 - 52520677
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttta 101  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||||||    
T  52520748 taactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttta 52520677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 46352701 - 46352631
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    |||||||| |||||||| |||||||||||||||||  |||||||||| ||||||||||||| |||||||||    
T  46352701 taactactgtataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcccttt 46352631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 41304068 - 41304004
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||| |||||||||||||||||  | |||||||||||||||||||||| |||||||    
T  41304068 tactatataatttcctttttcatatccttaaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 49893398 - 49893330
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||| |||||||||| |||||||||||||||||  |||||||||| ||||||||||||| |||||||    
T  49893398 taactattatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 4168250 - 4168183
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||| ||||||||||  ||| |||||||||||||||||||| ||||||    
T  4168250 taactactatataatttccttttttatatccttaaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 20924059 - 20923992
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||| ||||||  ||||||||||| |||||||||||| ||||||    
T  20924059 taactactatataatttcctttttcatacccttaaccagtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 39074486 - 39074419
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||    
T  39074486 taactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 43786938 - 43786871
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||| | ||||  |||||||||||||||||||||||| ||||||    
T  43786938 taactactatataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 858656 - 858587
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| ||||||||||||||||| |||||| | || |||||||||| || ||||||||    
T  858656 taactactatataatttcctttttcatatccttaactagtgcactgggggcaccggtttgcatttccctt 858587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 48725334 - 48725271
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||| ||||||    
T  48725334 tactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 52246649 - 52246582
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||| ||||||||||||  ||||||||||||||||  ||||||||||||||||| |||||| ||||||    
T  52246649 taacaactatataatttcatttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 52246582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 11308329 - 11308398
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||| |||||||||| |||||||| ||||||||| |||| ||||||  ||||||||||| ||||||||    
T  11308329 taactattatataatttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 13159964 - 13159895
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| ||||||||||||||||| |||  |||| |  |||||||||||| ||||||||    
T  13159964 taactactatataatttcctttttcatatccttaactagaaccccaggagcaccggttagcatttccctt 13159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 22248954 - 22248910
Alignment:
Q  29 ataactactatataattttctttttcatatccttaattagtgccc 73  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  22248954 ataactactatataatttcctttttcatatccttaactagtgccc 22248910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 49529390 - 49529434
Alignment:
Q  32 actactatataattttctttttcatatccttaattagtgccccgg 76  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  49529390 actagtatataattttctttttcatatccttaatcagtgccccgg 49529434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 50395681 - 50395741
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 90  Q
    |||||||| |||||||||||||||||||||| |||  |||| ||||| |||||||||||||    
T  50395681 taactactgtataattttctttttcatatccctaaccagtgtcccgggggcaccggttagc 50395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 51818993 - 51819061
Alignment:
Q  29 ataactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||| ||||||||||||||  |||||||||| |||||||| |||||| | |||||| ||||||    
T  51818993 ataactactaaataattttctttttagtatccttaatcagtgccccagaggcatcagttagcatttccc 51819061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 53489943 - 53490019
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgcccc--ggaggcaccggttagcctttccctttaaat 104  Q
    ||||||||||||||||| |||||||||| ||||||  ||||||||  || ||||||| ||||| |||||| ||||||    
T  53489943 taactactatataatttcctttttcatacccttaaccagtgccccgggggggcaccgattagcatttcccattaaat 53490019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 41554059 - 41554118
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 90  Q
    ||||||||||||||||| |||||||||||||||||  ||||| |||| |||||| ||||||    
T  41554059 taactactatataatttcctttttcatatccttaaccagtgcaccgg-ggcaccagttagc 41554118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 10617403 - 10617469
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||| ||||||||||| ||||  |||| ||||||||||| | ||||||    
T  10617403 taactactatataatttccttttttatatccttaatcagtg-tccgggggcaccggttaacatttccc 10617469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 42964368 - 42964426
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggtta 88  Q
    ||||||||||| |||||  ||||||||||||||||  ||||||||||| ||||| ||||    
T  42964368 taactactataaaatttcatttttcatatccttaaccagtgccccggaagcaccagtta 42964426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 43269858 - 43269916
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggtta 88  Q
    |||||||||| |||||| | |||||||||||||||  ||||| ||| ||||||||||||    
T  43269858 taactactatgtaatttcccttttcatatccttaaccagtgctccgaaggcaccggtta 43269916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 52718234 - 52718200
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    ||||||||||||||||| |||||||||||||||||    
T  52718234 taactactatataatttcctttttcatatccttaa 52718200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 2362861 - 2362801
Alignment:
Q  37 tatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||| |||||||||||||||||  | ||| ||||  |||||||||||| ||||||    
T  2362861 tatataatttcctttttcatatccttaaccattgcaccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 2391674 - 2391630
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgcccc 74  Q
    ||||||||||||||||| ||||||| |||||||||  ||||||||    
T  2391674 taactactatataatttcctttttcttatccttaaccagtgcccc 2391630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 2393435 - 2393391
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgcccc 74  Q
    ||||||||||||||||| ||||||| |||||||||  ||||||||    
T  2393435 taactactatataatttcctttttcttatccttaaccagtgcccc 2393391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 29241704 - 29241660
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgcccc 74  Q
    ||||||||||||||||| | ||||||||||||||| | |||||||    
T  29241704 taactactatataatttccattttcatatccttaactggtgcccc 29241660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 13661875 - 13661802
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 103  Q
    ||||||||||||||||| |||||||||||||||||  ||||| |||| ||||||||||||| ||||||||||||    
T  13661875 taactactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctttaaa 13661802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 6283622 - 6283562
Alignment:
Q  37 tatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  6283622 tatataattttctttttcatatctttaactagtgccccggaggcaccggttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 10070036 - 10069969
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||| ||||||    
T  10070036 taactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 35132589 - 35132518
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttta 101  Q
    ||||||||||||||||| |||||||||||||||||  |||| ||||| ||||||||||||| ||||||||||    
T  35132589 taactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttcccttta 35132518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 19647777 - 19647846
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||  |||||||||| ||| ||||    
T  19647777 taactactatataatttcctttttcatatccttaaccagtgccccggagataccggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 13470216 - 13470148
Alignment:
Q  32 actactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    |||||||||| |||| |||||||||||||||||  ||||||||  |||||||||||||| |||||||||    
T  13470216 actactatattatttcctttttcatatccttaaccagtgccccataggcaccggttagcatttcccttt 13470148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 35504359 - 35504426
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||| ||||||  |||| ||||| ||||||||||||| ||||||    
T  35504359 taactactatataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 2619676 - 2619742
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 96  Q
    ||||||||| |||||||||||||||||||||||||  |||| ||||||| |||| |||||| |||||    
T  2619676 taactactaaataattttctttttcatatccttaacaagtgtcccggagacaccagttagcatttcc 2619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 10054478 - 10054540
Alignment:
Q  37 tatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||||    
T  10054478 tatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 10054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 34650952 - 34651029
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaattatt 108  Q
    ||||||||||||||||| |||||||||| ||||||  |||| ||||| ||||||||||||| ||||||  |||||||||    
T  34650952 taactactatataatttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttcccaataaattatt 34651029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 12506363 - 12506287
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaatta 106  Q
    ||||||||||||||||| ||||||||||  |||||  ||||| || ||||||||||||||| |||||| | ||||||    
T  12506363 taactactatataatttcctttttcatactcttaacgagtgctccagaggcaccggttagcatttcccataaaatta 12506287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 21944986 - 21945050
Alignment:
Q  37 tatataattttctttttcat-atccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    |||||||||||| |||| || ||||||||  |||||||||||||||||||||||| |||||||||    
T  21944986 tatataattttcctttttattatccttaaccagtgccccggaggcaccggttagcatttcccttt 21945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 11958086 - 11958153
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||| ||||| ||||   ||||||||| ||||||||||||| ||||||    
T  11958086 taactactatataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 8787406 - 8787337
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||||||||||||||  ||||||||| ||||||  | |||||||| | ||||||||||| ||||||||    
T  8787406 taactactatataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttccctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 39069447 - 39069379
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| ||||| |||| ||||||  ||||||| ||| |||||||||||| ||||||||    
T  39069447 taactactatataatttcctttt-catacccttaaccagtgccctggaagcaccggttagcatttccctt 39069379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 40057374 - 40057339
Alignment:
Q  30 taactactatataattttctttttcatatccttaat 65  Q
    ||||||||||||||||| ||||||||||||||||||    
T  40057374 taactactatataatttcctttttcatatccttaat 40057339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 40564523 - 40564594
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 103  Q
    ||||||||||||||||| |||||||| |||||||||   || ||||||  ||||||||||| ||||||| ||||    
T  40564523 taactactatataatttcctttttcaaatccttaatcgatgtcccgga--caccggttagcatttccctataaa 40564594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 4837320 - 4837256
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||| ||||||||||| |||||   ||||||||| ||||||||||| | ||||||||    
T  4837320 tactatataatttcctttttcatattcttaaccggtgccccgg-ggcaccggttaacatttccctt 4837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 11846139 - 11846079
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 90  Q
    ||||||||||||||||| |||||| |||||||||  ||||| ||||| | ||||| |||||    
T  11846139 taactactatataatttccttttttatatccttagctagtgtcccggggacaccgcttagc 11846079  T

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Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 4089209 - 4089136
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 103  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||    
T  4089209 taactactatataattttctttttcatacccttaatcagtgccccaggggcaccggttagcatttccctataaa 4089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 43944574 - 43944505
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||| ||||||||    
T  43944574 taactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccctt 43944505  T

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Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 15186310 - 15186240
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| |||||||||    
T  15186310 taactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 16536115 - 16536041
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaat 104  Q
    ||||||||||||||||| |||||||||| |||||||  ||||||||| ||||||||||||| |||||||| ||||    
T  16536115 taactactatataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttcccttaaaat 16536041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 18067998 - 18068071
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 103  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||| ||||    
T  18067998 taactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctataaa 18068071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 43202506 - 43202571
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||| ||||||||    
T  43202506 tactatataatttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 54897375 - 54897308
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||| ||||||||||||  |||||||||| ||||||||||||| ||||||    
T  54897375 taactactatataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 789649 - 789719
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||| ||||||   ||||||||| ||||||||||||| |||||||||    
T  789649 taactactatataatttcctttttcatacccttaacccgtgccccgggggcaccggttagcatttcccttt 789719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 52533904 - 52533981
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaattat 107  Q
    ||||||||||||||||| ||||||||||| |||||  |||| || |||||||||||||| | ||||||||||| ||||    
T  52533904 taactactatataatttcctttttcatattcttaaccagtgtcctggaggcaccggttaacatttccctttaatttat 52533981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 4268941 - 4269009
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||| ||| |||||||||| ||||||  |||||||||| ||||||||||||| |||||||    
T  4268941 taactactatatagtttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 50619153 - 50619093
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 90  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||  ||||| ||||||    
T  50619153 taactactatataattttctttttcatattcttaatcagtgccccgggagcaccagttagc 50619093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 55882746 - 55882683
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||||||||||| ||||||||||||||||  |||||||||||| ||||||||||| |||||||    
T  55882746 tactatataatttt-tttttcatatccttaacgagtgccccggagacaccggttagcatttccct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 32217112 - 32217045
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||| ||||||||||  |||||||||| |||||| |||||| ||||||    
T  32217112 taactactatataatttccttttttatatccttaaccagtgccccgggggcaccagttagcatttccc 32217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 7769005 - 7768935
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| || |||| ||||| |||||||||    
T  7769005 taactactatataatttcctttttcatacccttaaccagtgccccgggggtaccgattagcatttcccttt 7768935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 29591256 - 29591186
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| ||| ||||||| |||||  |||||||||| |||||| |||||| |||||||||    
T  29591256 taactactatataatttccttattcatattcttaaccagtgccccgggggcaccagttagcatttcccttt 29591186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 47231991 - 47232061
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    |||||| |||||||||| |||||||| ||||||||  ||||| |||| ||||||||||||| |||||||||    
T  47231991 taactattatataatttcctttttcacatccttaaccagtgctccgggggcaccggttagcatttcccttt 47232061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 33108792 - 33108860
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||| |||||||||| |||||||||||| ||||  |||||||||||||||||||||| | ||||||||    
T  33108792 taactattatataatttcctttttcatatc-ttaaccagtgccccggaggcaccggttaacatttccctt 33108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 3783620 - 3783687
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||||||||||  ||||||||||  ||||   ||||||||||||||||||||||| ||||||    
T  3783620 taactactatataatttcatttttcatatgtttaaccggtgccccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 24679761 - 24679827
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||||||||||  ||||||||||||||||  |||||||| ||| ||||||||||| ||||||    
T  24679761 taactactatataatttcttttttcatatccttaaccagtgcccc-gagacaccggttagcatttccc 24679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 28755687 - 28755621
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| || | ||||||||||| ||||||    
T  28755687 taactactatataatttcctttttcatatccttaaccagtgccctgg-gacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 42898865 - 42898939
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaat 104  Q
    ||||||||||||||||| |||||| ||||||||||  ||||||| ||| |||||| ||| | ||||||| |||||    
T  42898865 taactactatataatttccttttttatatccttaaccagtgccctggaagcaccgattaacatttccctataaat 42898939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 12356311 - 12356242
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||||||  |||  | | | ||||||||||||| ||||||||    
T  12356311 taactactatataatttcctttttcatatccttaaccagtatctcaggggcaccggttagcatttccctt 12356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 49915222 - 49915158
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||||||| ||||||||||||||||||||| ||||| || | ||| |||||| || |||||||    
T  49915222 tactatataaatttctttttcatatccttaatcagtgcaccaggggcgccggtttgcatttccct 49915158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 4220262 - 4220195
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||||||||   || ||||| ||||| |||||| | ||||||    
T  4220262 taactactatataatttcctttttcatatccttaacccgtaccccgaaggcatcggttatcatttccc 4220195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 32202599 - 32202666
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||| ||||||||||   ||||||||| | ||||||||| | ||||||    
T  32202599 taactactatataatttccttttttatatccttaacccgtgccccggggacaccggttaacatttccc 32202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 54054615 - 54054548
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||| ||||||||||  ||||||||||||||||   ||||||| | ||||||||||||| ||||||    
T  54054615 taactattatataatttcttttttcatatccttaaccggtgcccccggggcaccggttagcatttccc 54054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 10110147 - 10110189
Alignment:
Q  56 tatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||||||| |||| ||||||||||||||||||| |||||||    
T  10110147 tatccttaatcagtgtcccggaggcaccggttagcatttccct 10110189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 19503224 - 19503289
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 96  Q
    |||||| |||||||||| |||||||||||||||||  ||| ||| ||| |||||||||||| |||||    
T  19503224 taactagtatataatttcctttttcatatccttaaccagtacccggga-gcaccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 30154282 - 30154327
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccgg 76  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  30154282 taactactatataatttcctttttcatat-cttaactagtgccccgg 30154327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 52697119 - 52697085
Alignment:
Q  30 taactactatataattttctttttcatatccttaa 64  Q
    |||||||||||||||||| ||||||||||||||||    
T  52697119 taactactatataattttgtttttcatatccttaa 52697085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 54655995 - 54656039
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgcccc 74  Q
    ||||||||||||||||| |||||| ||||||||||  ||||||||    
T  54655995 taactactatataatttccttttttatatccttaaccagtgcccc 54656039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 54945897 - 54945941
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgcccc 74  Q
    ||||| ||||||||||| |||||||||||||||||  ||||||||    
T  54945897 taactgctatataatttcctttttcatatccttaaccagtgcccc 54945941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 892 - 825
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| |||| ||||||    
T  892 taactactatataattttctttttcatatccttaactagtgctccggaagcaccggctagcatttccc 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 53804 - 53877
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaa 103  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||| ||||    
T  53804 taactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctataaa 53877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 50615 - 50548
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||||||| |||||||||||| ||||  |||||||||||||||||||||| | ||||||    
T  50615 taactactatataatttcctttttcatatctttaaccagtgccccggaggcaccggttaacatttccc 50548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 24438544 - 24438477
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||| ||| |||||||||| |||||| ||||||||||| ||||||||||||| ||||||    
T  24438544 taactactatatagtttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 34606324 - 34606261
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||||||| |||||| ||||||    
T  34606324 tactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 34606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 29993606 - 29993676
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||||||||||   ||||||||| |||||| |||||| |||||||||    
T  29993606 taactactatataatttcctttttcatatccttaaccggtgccccgggggcacccgttagcatttcccttt 29993676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 47657043 - 47656981
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 96  Q
    |||||||||||||||||||||||||||||||  |||||||| || |||||||||||| |||||    
T  47657043 tactatataattttctttttcatatccttaaccagtgcccccgaagcaccggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 12218555 - 12218624
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| ||||||||||| ||||   |||||||||| ||||||||||||| ||||||||    
T  12218555 taactactatataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttccctt 12218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 28262099 - 28262038
Alignment:
Q  29 ataactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 90  Q
    |||||||||||||||||| |||||||||||||||||   ||| |||||||||||||||||||    
T  28262099 ataactactatataatttcctttttcatatccttaaccggtgacccggaggcaccggttagc 28262038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 34333347 - 34333282
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||| ||||||||    
T  34333347 tactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 34333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 5239352 - 5239284
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||||||| | ||||  ||||| |||||||||||||||||| |||||||    
T  5239352 taactactatataatttcctttttcataccattaaccagtgctccggaggcaccggttagcatttccct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 4628633 - 4628563
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||||||||||   ||||||| | |||| |||||||| |||||||||    
T  4628633 taactactatataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttcccttt 4628563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 18486024 - 18485959
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||| |||||  ||||||||||  |||||||||| ||||||||||||| ||||||||    
T  18486024 tactatataatttccttttcaatatccttaaccagtgccccgggggcaccggttagcatttccctt 18485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 24798522 - 24798590
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||||| ||  |||| ||||| ||||||||||||| ||||||||    
T  24798522 taactactatataatttcctttttcatatcctcaacaagtg-cccgggggcaccggttagcatttccctt 24798590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 1737047 - 1736980
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||| ||||||||||  ||||||||||||||||  |||||||| || |||||||||||| ||||||    
T  1737047 taactattatataatttcatttttcatatccttaaccagtgccccagaagcaccggttagcatttccc 1736980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 30810722 - 30810676
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccgg 76  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||    
T  30810722 taactactatataatttcctttttcatatccttaaccagtgccccgg 30810676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 34546433 - 34546503
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcccttt 100  Q
    ||||||||||||||||| |||||||||||||||||   || || ||| |||| |||||||| |||||||||    
T  34546433 taactactatataatttcctttttcatatccttaaccggtacctcgggggcatcggttagcatttcccttt 34546503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 22973665 - 22973593
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaa 102  Q
    |||||||||||||||||  ||||| ||||| ||||  ||||||||||||||||  |||||| |||| ||||||    
T  22973665 taactactatataatttctttttttatatcattaaccagtgccccggaggcactagttagcatttctctttaa 22973593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 23357826 - 23357894
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||| |||||||||||||||||||||||  ||| | || |||| |||||||| | |||||||    
T  23357826 taactactatacaattttctttttcatatccttaacgagtactccagaggaaccggttaacatttccct 23357894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 28587974 - 28587911
Alignment:
Q  32 actactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 96  Q
    ||||||||||||||| |||||||||||||||||  ||||  |||| ||||||||||||| |||||    
T  28587974 actactatataatttcctttttcatatccttaaccagtg-tccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 8754704 - 8754771
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||||||||||  ||||||||||||||||  ||||| ||   ||||||||||||| ||||||    
T  8754704 taactactatataatttcatttttcatatccttaaccagtgctcccagggcaccggttagcatttccc 8754771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 47118095 - 47118150
Alignment:
Q  42 aattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    ||||| |||||||||||| ||||  ||||||||||||||||| |||||| ||||||    
T  47118095 aatttcctttttcatatctttaaccagtgccccggaggcaccagttagcatttccc 47118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 7689331 - 7689393
Alignment:
Q  42 aattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctttaaat 104  Q
    ||||| |||||| ||||||||||| |||| ||| ||| ||||||||| | |||||||||||||    
T  7689331 aatttccttttttatatccttaatcagtgtcccagagacaccggttaacatttccctttaaat 7689393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 5729413 - 5729344
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||| |||||||||| |||||||||||||||||  ||||| ||||   ||||||||| | ||||||||    
T  5729413 taactattatataatttcctttttcatatccttaaccagtgctccgggaacaccggttaacatttccctt 5729344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 11686443 - 11686503
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagc 90  Q
    ||||||||||||||||| |||||| ||||||||||  |||  |||||| ||||| ||||||    
T  11686443 taactactatataatttccttttttatatccttaaccagtatcccggaagcaccagttagc 11686503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 19434534 - 19434502
Alignment:
Q  56 tatccttaattagtgccccggaggcaccggtta 88  Q
    |||||||||| ||||||||||||||||||||||    
T  19434534 tatccttaatcagtgccccggaggcaccggtta 19434502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 27456232 - 27456299
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||||||||||||||  |||| |||||||||||  |||| ||||| |||||| |||||| |||||||    
T  27456232 taactactatataatttctttttccatatccttaaccagtg-cccgggggcaccagttagcatttccct 27456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 47839559 - 47839492
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||| ||||||| || |||||||||||||||||  ||| |||||| | ||||||||||| |||||||    
T  47839559 taactattatataaattcctttttcatatccttaaccagtaccccgg-gacaccggttagcatttccct 47839492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 23024 - 22959
Alignment:
Q  34 tactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||| |||||||||||||||||  ||||| |||| ||||||||||||| ||||||||    
T  23024 tactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctt 22959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 68409 - 68478
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    |||||||||||||||||  ||||||||||||||||  |||||||||| |||||| |||||| ||||||||    
T  68409 taactactatataatttcatttttcatatccttaaccagtgccccgggggcaccagttagcatttccctt 68478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 6229 - 6295
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttcc 96  Q
    ||||||||||||| ||| |||||||||||||||||  |||||||| | ||||||||||||| |||||    
T  6229 taactactatatagtttcctttttcatatccttaaccagtgccccaggggcaccggttagcatttcc 6295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 116271 - 116202
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| |||||||||||| ||||   ||||||||| ||||||||||||| ||| ||||    
T  116271 taactactatataatttcctttttcatatctttaacctgtgccccgggggcaccggttagcattttcctt 116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 147024 - 147093
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccctt 99  Q
    ||||||||||||||||| ||||||||||||||||| |||  |||| |  |||||||||||| ||||||||    
T  147024 taactactatataatttcctttttcatatccttaactagaaccccaggagcaccggttagcatttccctt 147093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 359 - 292
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    |||||| |||||||||||||||||||||| |||||  ||||||| || ||||||||||||  |||||||    
T  359 taactattatataattttctttttcatatgcttaaccagtgccctgg-ggcaccggttaggatttccct 292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 8016 - 8059
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccc 73  Q
    ||||||||||||||||| |||||||||||||||||  |||||||    
T  8016 taactactatataatttcctttttcatatccttaaccagtgccc 8059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 7355 - 7312
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccc 73  Q
    ||||||||||||||||| |||||||||||||||||  |||||||    
T  7355 taactactatataatttcctttttcatatccttaaccagtgccc 7312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 14963 - 14896
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccc 97  Q
    |||||||||||||||||  ||||| ||||| ||||  |||||||||| | ||||||||||| ||||||    
T  14963 taactactatataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttccc 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 69293 - 69250
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccc 73  Q
    ||||||||||||||||| |||||||||||||||||  |||||||    
T  69293 taactactatataatttactttttcatatccttaacgagtgccc 69250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 745 - 677
Alignment:
Q  30 taactactatataattttctttttcatatccttaattagtgccccggaggcaccggttagcctttccct 98  Q
    ||||||||||||||||| |||||||||||| ||||   |||| | || ||||||| ||||| |||||||    
T  745 taactactatataatttcctttttcatatctttaacccgtgctctgggggcaccgattagcatttccct 677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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