View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0743_high_42 (Length: 404)

Name: NF0743_high_42
Description: NF0743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0743_high_42
NF0743_high_42
[»] scaffold0400 (5 HSPs)
scaffold0400 (7-383)||(11921-12297)
scaffold0400 (13-127)||(11495-11609)
scaffold0400 (69-245)||(5695-5871)
scaffold0400 (7-102)||(11777-11872)
scaffold0400 (14-127)||(11640-11753)
[»] scaffold0365 (5 HSPs)
scaffold0365 (7-383)||(12564-12940)
scaffold0365 (13-127)||(12138-12252)
scaffold0365 (69-245)||(6339-6515)
scaffold0365 (7-102)||(12420-12515)
scaffold0365 (14-127)||(12283-12396)
[»] chr1 (15 HSPs)
chr1 (59-274)||(14481611-14481826)
chr1 (59-383)||(14503176-14503500)
chr1 (7-100)||(14533622-14533715)
chr1 (192-333)||(14467130-14467271)
chr1 (7-104)||(15036162-15036259)
chr1 (59-105)||(15009978-15010024)
chr1 (59-105)||(15031076-15031122)
chr1 (59-104)||(15010194-15010239)
chr1 (59-127)||(15024023-15024091)
chr1 (59-127)||(15031364-15031432)
chr1 (59-100)||(15024311-15024352)
chr1 (59-100)||(15031652-15031693)
chr1 (59-102)||(14533908-14533951)
chr1 (9-91)||(14523510-14523592)
chr1 (7-100)||(15031168-15031261)
[»] scaffold0289 (1 HSPs)
scaffold0289 (296-332)||(18761-18797)
[»] chr7 (1 HSPs)
chr7 (296-332)||(15665893-15665929)


Alignment Details
Target: scaffold0400 (Bit Score: 340; Significance: 0; HSPs: 5)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 7 - 383
Target Start/End: Original strand, 11921 - 12297
Alignment:
Q  7 ccataggtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaactcagtag 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11921 ccattggtaacttggtcaacttggattctattaccatttcaacaaataaaccctctggaccaattcctcccactatcggaaatttgacaaaactcagtag 12020  T
Q  107 cttacctcctttctcaaatgcattaagtggcaacattccaaccagaatgaatagagttaccaatttagaagttttgttgttaggtgataataatttcaca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12021 cttacctcctttctcaaatgcattaagtggcaacattccaaccagaatgaatagagttaccaatttagaagttttgttgttaggtgataataatttcaca 12120  T
Q  207 ggtcaattaccacacaacatttgtgttagtggaaagttatattggttcactgcatccaataatcatttcacaggattagttccaatgaatttgaagaatt 306  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12121 ggtcaattaccgcacaacatttgtgttagtggaaagttatattggttcactgcatccaataatcatttcacaggattagttccaatgagtttgaagaatt 12220  T
Q  307 gctccagccttattagagttaggcttcnnnnnnntcaattaactggaaatataacagatggttttggtgtttatcca 383  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  12221 gctccagccttattagagttaggcttcaaaaaaatcaattaactggaaatataacagatggttttggtgtttatcca 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 11495 - 11609
Alignment:
Q  13 gtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaactcagtagcttacc 112  Q
    ||||||||||||| ||||||||||||  | ||   | ||||| || ||| |||||||||||| |||||||||||||||||||||||||||  |  ||| |    
T  11495 gtaacttggtcaatttggattctattctccttcatagaaataaactctcgggaccaattcctaccactatcggaaatttgacaaaactcacaatgttatc 11594  T
Q  113 tcctttctcaaatgc 127  Q
    || ||||||||||||    
T  11595 tcttttctcaaatgc 11609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 245
Target Start/End: Original strand, 5695 - 5871
Alignment:
Q  69 attcctcccactatcggaaatttgacaaaactcagtagcttacctcctttctcaaatgcattaagtggcaacattccaaccagaatgaatagagttacca 168  Q
    |||||| ||||||| ||||||||||||||||||| ||  ||| ||| | | ||||||||  | | ||| || ||||||||   |||||||||  |||| |    
T  5695 attccttccactattggaaatttgacaaaactcactaagttatctcttatttcaaatgctctcactggaaatattccaactgaaatgaataggcttacta 5794  T
Q  169 atttagaagttttgttgttaggtgataataatttcacaggtcaattaccacacaacatttgtgttagtggaaagtta 245  Q
    |||| ||| || |   |||| |  ||||||||||||||||||| ||||| ||||| || ||||||||||||||||||    
T  5795 attttgaaattctccagttatgcaataataatttcacaggtcatttacctcacaatatatgtgttagtggaaagtta 5871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 11777 - 11872
Alignment:
Q  7 ccataggtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaactca 102  Q
    ||||||||||||||||||| ||||||||||||| | ||   | ||||| || ||| ||||||||||||  ||||||   |||||||||||||||||    
T  11777 ccataggtaacttggtcaatttggattctattatccttcatataaataaactctcgggaccaattccttgcactataaaaaatttgacaaaactca 11872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 11640 - 11753
Alignment:
Q  14 taacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaactcagtagcttacct 113  Q
    |||||||||||| |||||| |||||  | ||   ||||||| ||  |||||||| ||||||  |||||| ||||||||||||||||||| |   ||| ||    
T  11640 taacttggtcaatttggatactattgtccttcatacaaatacactatctggacctattcctttcactataggaaatttgacaaaactcactgagttaact 11739  T
Q  114 cctttctcaaatgc 127  Q
    | ||||||||||||    
T  11740 cttttctcaaatgc 11753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 340; Significance: 0; HSPs: 5)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 7 - 383
Target Start/End: Original strand, 12564 - 12940
Alignment:
Q  7 ccataggtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaactcagtag 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12564 ccattggtaacttggtcaacttggattctattaccatttcaacaaataaaccctctggaccaattcctcccactatcggaaatttgacaaaactcagtag 12663  T
Q  107 cttacctcctttctcaaatgcattaagtggcaacattccaaccagaatgaatagagttaccaatttagaagttttgttgttaggtgataataatttcaca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12664 cttacctcctttctcaaatgcattaagtggcaacattccaaccagaatgaatagagttaccaatttagaagttttgttgttaggtgataataatttcaca 12763  T
Q  207 ggtcaattaccacacaacatttgtgttagtggaaagttatattggttcactgcatccaataatcatttcacaggattagttccaatgaatttgaagaatt 306  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12764 ggtcaattaccgcacaacatttgtgttagtggaaagttatattggttcactgcatccaataatcatttcacaggattagttccaatgagtttgaagaatt 12863  T
Q  307 gctccagccttattagagttaggcttcnnnnnnntcaattaactggaaatataacagatggttttggtgtttatcca 383  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  12864 gctccagccttattagagttaggcttcaaaaaaatcaattaactggaaatataacagatggttttggtgtttatcca 12940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 12138 - 12252
Alignment:
Q  13 gtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaactcagtagcttacc 112  Q
    ||||||||||||| ||||||||||||  | ||   | ||||| || ||| |||||||||||| |||||||||||||||||||||||||||  |  ||| |    
T  12138 gtaacttggtcaatttggattctattctccttcatagaaataaactctcgggaccaattcctaccactatcggaaatttgacaaaactcacaatgttatc 12237  T
Q  113 tcctttctcaaatgc 127  Q
    || ||||||||||||    
T  12238 tcttttctcaaatgc 12252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 245
Target Start/End: Original strand, 6339 - 6515
Alignment:
Q  69 attcctcccactatcggaaatttgacaaaactcagtagcttacctcctttctcaaatgcattaagtggcaacattccaaccagaatgaatagagttacca 168  Q
    |||||| ||||||| ||||||||||||||||||| ||  ||| ||| | | ||||||||  | | ||| || ||||||||   |||||||||  |||| |    
T  6339 attccttccactattggaaatttgacaaaactcactaagttatctcttatttcaaatgctctcactggaaatattccaactgaaatgaataggcttacta 6438  T
Q  169 atttagaagttttgttgttaggtgataataatttcacaggtcaattaccacacaacatttgtgttagtggaaagtta 245  Q
    |||| ||| || |   |||| |  ||||||||||||||||||| ||||| ||||| || ||||||||||||||||||    
T  6439 attttgaaattctccagttatgcaataataatttcacaggtcatttacctcacaatatatgtgttagtggaaagtta 6515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 12420 - 12515
Alignment:
Q  7 ccataggtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaactca 102  Q
    ||||||||||||||||||| ||||||||||||| | ||   | ||||| || ||| ||||||||||||  ||||||   |||||||||||||||||    
T  12420 ccataggtaacttggtcaatttggattctattatccttcatataaataaactctcgggaccaattccttgcactataaaaaatttgacaaaactca 12515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 12283 - 12396
Alignment:
Q  14 taacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaactcagtagcttacct 113  Q
    |||||||||||| |||||| |||||  | ||   ||||||| ||  |||||||| ||||||  |||||| ||||||||||||||||||| |   ||| ||    
T  12283 taacttggtcaatttggatactattgtccttcatacaaatacactatctggacctattcctttcactataggaaatttgacaaaactcactgagttaact 12382  T
Q  114 cctttctcaaatgc 127  Q
    | ||||||||||||    
T  12383 cttttctcaaatgc 12396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 274
Target Start/End: Original strand, 14481611 - 14481826
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaactcagtagcttacctcctttctcaaatgcattaagtggcaacattccaaccagaatgaat 158  Q
    |||||||||||||||| ||||||||||||| |||||||| |||| | | ||||  | |||||||||||||||||||||||| ||||||||   ||||||     
T  14481611 ctctggaccaattccttccactatcggaaacttgacaaacctcacttggttacagcttttctcaaatgcattaagtggcaatattccaactgtaatgaac 14481710  T
Q  159 agagttaccaattt-agaagttttgttgttaggtgataataatttcacaggtcaattaccacacaacatttgtgttagtggaaagttatattggttcact 257  Q
    |   |||||||||| |||| | |||  ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  |||||||||     
T  14481711 aagcttaccaattttagaa-tattggagttagatgataataatttcacaggtcaattaccactcaacatttgtgttagtggagagttaacttggttcacc 14481809  T
Q  258 gcatccaataatcattt 274  Q
    |||||||||||||||||    
T  14481810 gcatccaataatcattt 14481826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 59 - 383
Target Start/End: Original strand, 14503176 - 14503500
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaactcagtagcttacctcctttctcaaatgcattaagtggcaacattccaaccagaatgaat 158  Q
    |||||||||||||||| | ||||||||||||||||| ||||||| ||  |||  || |||||||||||  ||| |||| || |||||||    |||||||    
T  14503176 ctctggaccaattccttcaactatcggaaatttgacgaaactcactatattaaatcttttctcaaatgagttaggtggaaatattccaaaagaaatgaat 14503275  T
Q  159 agagttaccaatttagaagttttgttgttaggtgataataatttcacaggtcaattaccacacaacatttgtgttagtggaaagttatattggttcactg 258  Q
    ||  | ||||||||  || |||||   |||  |||||||||||||| ||| || ||||| ||||||||||||||| |||||| |||       |||||||    
T  14503276 aggataaccaatttgaaaattttgcaattatctgataataatttcataggccatttacctcacaacatttgtgttggtggaatgttgacaaatttcactg 14503375  T
Q  259 catccaataatcatttcacaggattagttccaatgaatttgaagaattgctccagccttattagagttaggcttcnnnnnnntcaattaactggaaatat 358  Q
    |    ||||| || ||||||||   | |||||| || ||| ||||||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  14503376 ctagtaataaccaattcacagggccaattccaaagagtttaaagaattgctccagccttattagagttaggcttcaaaaaaatcaattaactggaaatat 14503475  T
Q  359 aacagatggttttggtgtttatcca 383  Q
    |||||||||||||||||||||||||    
T  14503476 aacagatggttttggtgtttatcca 14503500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 14533715 - 14533622
Alignment:
Q  7 ccataggtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaact 100  Q
    ||||||||||| |||| || |||||| |||||  | |||||  ||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  14533715 ccataggtaacatggttaatttggatactatttacctttcagaaaataaactctctggaccaattccttccactatcggaaatttgacaaaact 14533622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 14467130 - 14467271
Alignment:
Q  192 gataataatttcacaggtcaattaccacacaacatttgtgttagtggaaagttatattggttcactgcatccaataatcatttcacaggattagttccaa 291  Q
    |||||||||||||||||||| ||||| |||||||| |||| | |||||||||||  ||||||| | ||   |||||| || ||||||||   | ||||||    
T  14467130 gataataatttcacaggtcatttacctcacaacatatgtgctggtggaaagttaacttggttctccgccagcaataaccaattcacaggcccaattccaa 14467229  T
Q  292 tgaatttgaagaattgctccagccttattagagttaggcttc 333  Q
     || ||||||||| ||||| ||||||  |||||| |||||||    
T  14467230 agagtttgaagaactgctctagcctttatagagtaaggcttc 14467271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 15036162 - 15036259
Alignment:
Q  7 ccataggtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaactcagt 104  Q
    |||||||||| ||| | || ||||||||||||  | |||||  |||||  | |||||||||||||||| ||||||||| |||||||||||||||||||    
T  15036162 ccataggtaatttgattaatttggattctattcacctttcactaaataatctctctggaccaattccttccactatcgaaaatttgacaaaactcagt 15036259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 15009978 - 15010024
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaactcagta 105  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  15009978 ctctggaccaattccttccactattggaaatttgacaaaactcagta 15010024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 15031076 - 15031122
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaactcagta 105  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  15031076 ctctggaccaattccttccactattggaaatttgacaaaactcagta 15031122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 15010194 - 15010239
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaactcagt 104  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  15010194 ctctggaccaattccttccactattggaaatttgacaaaactcagt 15010239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 15024023 - 15024091
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaactcagtagcttacctcctttctcaaatgc 127  Q
    |||||||||||||||| |||| ||||||||||| ||||||||| |||  ||| ||| ||||||||||||    
T  15024023 ctctggaccaattccttccaccatcggaaatttaacaaaactcggtacattatctcttttctcaaatgc 15024091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 15031364 - 15031432
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaactcagtagcttacctcctttctcaaatgc 127  Q
    |||||||||||||||| |||| ||||||||||| ||||||||| |||  ||| ||| ||||||||||||    
T  15031364 ctctggaccaattccttccaccatcggaaatttaacaaaactcggtacattatctcttttctcaaatgc 15031432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 15024311 - 15024352
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaact 100  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  15024311 ctctggaccaattccatccactatcggaaatttgacaaaact 15024352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 15031652 - 15031693
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaact 100  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  15031652 ctctggaccaattccatccactatcggaaatttgacaaaact 15031693  T

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Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 14533951 - 14533908
Alignment:
Q  59 ctctggaccaattcctcccactatcggaaatttgacaaaactca 102  Q
    |||||||||| ||||| | |||||||||||||||||||||||||    
T  14533951 ctctggaccacttccttctactatcggaaatttgacaaaactca 14533908  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 14523592 - 14523510
Alignment:
Q  9 ataggtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaattt 91  Q
    ||||||||| | ||||| |||||| |||||  | |||||  ||||| || |||||||||| ||||| ||||||||||||||||    
T  14523592 ataggtaaccttgtcaatttggatactattgacttttcacaaaataaactctctggaccacttccttccactatcggaaattt 14523510  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 15031168 - 15031261
Alignment:
Q  7 ccataggtaacttggtcaacttggattctattaccatttcaacaaatataccctctggaccaattcctcccactatcggaaatttgacaaaact 100  Q
    |||||||||||||| |||| ||||||  ||||  | |||||  |||||  | ||||||||||||||||  ||||||||||||||| || |||||    
T  15031168 ccataggtaacttgatcaatttggatantattgacctttcacaaaataatctctctggaccaattcctttcactatcggaaatttaaccaaact 15031261  T

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Target: scaffold0289 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 18797 - 18761
Alignment:
Q  296 tttgaagaattgctccagccttattagagttaggctt 332  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  18797 tttgaagaattgctctagccttattagacttaggctt 18761  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 15665929 - 15665893
Alignment:
Q  296 tttgaagaattgctccagccttattagagttaggctt 332  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  15665929 tttgaagaattgctctagccttattagacttaggctt 15665893  T

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