View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0743_high_72 (Length: 303)
Name: NF0743_high_72
Description: NF0743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0743_high_72 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 6359158 - 6359447
Alignment:
| Q |
1 |
aggattgagaaactgcaaatcaattgatgcaaacacgagagacattttgaatttaagctcgtccttgtaattctctctatctactactgttattatttcg |
100 |
Q |
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| T |
6359158 |
aggattgagaaactgcaaatcaattgatgcaaacacgagagacgttttgaatttaagctcgtccttgtaattctctctatttactactgttattatttcg |
6359257 |
T |
|
| Q |
101 |
ttattaaatatattgtttgataccttcaagctttacagaaatctcgatccaataacctaatcccttcgtttttccactcataatcattgtacatcagctg |
200 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
6359258 |
ttattaaatatattgtttgataccttcaagcattacagaaatctcgatccaataacctaatcccttcgtttttccactcataatcgttgtacatcagctg |
6359357 |
T |
|
| Q |
201 |
cctccaacaacaccagcagcaataccttcgttgttggcaccatcattgtgattgtcatcagcacacaccagtcactcaaattcacgagta |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
6359358 |
cctccaacaacaccagcagcaataccttcgttgttggcaccatcattgtgattgtcatcagcacacaccagtcactcaaattcacaagta |
6359447 |
T |
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