View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0743_low_103 (Length: 275)
Name: NF0743_low_103
Description: NF0743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0743_low_103 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 34 - 275
Target Start/End: Original strand, 31395674 - 31395915
Alignment:
| Q |
34 |
aagaatattgaatggttaaagcaatatatgctgaaatgagaatcataaaggttacaaaaagatggagtgtaaataaaattatataggcttaaaagtaaga |
133 |
Q |
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| T |
31395674 |
aagaaaattgaatggttaaagcaatatatgctgaaatgagaatcataaaagttacaaaaagatgaagtgtaaataaaattatataggcttaaaaataaga |
31395773 |
T |
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| Q |
134 |
tataattttcaatttaactatatatgttggcagatacattgatgattagtacaaattggtttgagtaatttcaatggaaaggtacacaaagaagaaggac |
233 |
Q |
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| T |
31395774 |
tataattttcaatttaactatatatgttggcagatacattgatgattagtacaaattggtttgagtaatttcaatggaaaggtacacaaagaagaaggac |
31395873 |
T |
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| Q |
234 |
aattaaagtcagtattacagggggtaatttcttctctttctc |
275 |
Q |
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| T |
31395874 |
aattaaagtcagtattacaaggggtaatttcttctctttctc |
31395915 |
T |
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