View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0743_low_75 (Length: 341)
Name: NF0743_low_75
Description: NF0743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0743_low_75 |
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Alignment Details
Target: chr6 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 14736313 - 14736572
Alignment:
| Q |
1 |
tttggttttgtttttctccatctccgaggtgtatgagccaccacataaatcataaccaaggaaatgtgttatggaaattattcagcttgaggaattgaag |
100 |
Q |
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| T |
14736313 |
tttggttttgtttttctctatctccgaggtgtatgagccaccacacaaatcataaccaagaaaatgtgttatggaaattattcagcttgaggaattgaag |
14736412 |
T |
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| Q |
101 |
attttctgattttggaaaagcacccatttatctatcaacccaagttagatatttttgaatgctatgtcgtcaagaccaagattaggaacgtcatttaaga |
200 |
Q |
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| T |
14736413 |
attttctgattttggaaaagcactcatttatctatcaacccaagttagatatttttgaatgatatgtcgtcaagaccaagattaggaacgtcatttaaga |
14736512 |
T |
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| Q |
201 |
atattcaccgaaatttgaatatctctctaaagacttgaggaaagatatgaatgacacagg |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14736513 |
atattcaccgaaatttgaatatctctctaaagacttgaggaaagatatgaatgacacagg |
14736572 |
T |
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