View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0743_low_79 (Length: 332)
Name: NF0743_low_79
Description: NF0743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0743_low_79 |
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Alignment Details
Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 10254421 - 10254527
Alignment:
| Q |
113 |
tctttcactacaacccccaaacattatttcctccaacataaccatggtccctaaacccatcataataacaagtaaacaaccaccaacaacttcttctatc |
212 |
Q |
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| T |
10254421 |
tctttcactacaacccccaaacattatttcctccaacataaccatggtccctaaacccatcataataacaagtaaacaaccaccaacaacttcttctatc |
10254520 |
T |
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| Q |
213 |
cctccat |
219 |
Q |
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||||||| |
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| T |
10254521 |
cctccat |
10254527 |
T |
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