View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0744_high_11 (Length: 265)
Name: NF0744_high_11
Description: NF0744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0744_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 30 - 261
Target Start/End: Complemental strand, 40985968 - 40985737
Alignment:
| Q |
30 |
aatatactgtattgaaatgcaattctgtctccagcaggtttatcgagtattgggttcctgctcagttttccagtatgcagcttaagcagtattgttcaat |
129 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40985968 |
aatatactgtattgaaatgcaattctgtctccagcaggtttatcgagtattgggttcctgctcagttttccagtatgcagcttaagcagtattgttcaat |
40985869 |
T |
|
| Q |
130 |
gctgctttcaaactcaatgttgttatgctctggccaaaggtctgactctgttggtgccctccgtgagcttgtcatctcaacaaggaaggtaggcacgata |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
40985868 |
gctgctttcaaactcaatgttgttatgctctggccaaaggtctgactctgttggtgccctccgtgagcttgtcatctcaacaaagaaggtaggcacgata |
40985769 |
T |
|
| Q |
230 |
agaagcagataagctgaataagtttggctgtc |
261 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
40985768 |
agaagcagataagctgaataagtttggctgtc |
40985737 |
T |
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