View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0744_low_4 (Length: 466)

Name: NF0744_low_4
Description: NF0744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0744_low_4
NF0744_low_4
[»] chr5 (26 HSPs)
chr5 (95-455)||(5467725-5468091)
chr5 (348-420)||(7997166-7997238)
chr5 (354-420)||(24906307-24906373)
chr5 (350-400)||(25863211-25863261)
chr5 (354-399)||(6247630-6247675)
chr5 (354-399)||(21191062-21191107)
chr5 (354-399)||(21576751-21576796)
chr5 (354-399)||(28588680-28588725)
chr5 (350-399)||(31264446-31264495)
chr5 (355-399)||(39698549-39698593)
chr5 (356-399)||(6471897-6471940)
chr5 (354-401)||(13287405-13287452)
chr5 (350-421)||(18586291-18586361)
chr5 (344-378)||(9929649-9929683)
chr5 (351-421)||(26205763-26205833)
chr5 (354-399)||(3966511-3966556)
chr5 (354-399)||(7677713-7677758)
chr5 (354-399)||(14674277-14674322)
chr5 (354-399)||(23015995-23016040)
chr5 (354-399)||(30502394-30502439)
chr5 (354-399)||(30542737-30542782)
chr5 (354-399)||(31084331-31084376)
chr5 (354-399)||(41091263-41091308)
chr5 (354-399)||(42893368-42893413)
chr5 (356-421)||(43001786-43001851)
chr5 (361-397)||(10022642-10022678)
[»] scaffold0008 (1 HSPs)
scaffold0008 (323-421)||(263341-263445)
[»] chr3 (37 HSPs)
chr3 (323-399)||(34307755-34307831)
chr3 (354-399)||(17005625-17005670)
chr3 (348-401)||(24205041-24205094)
chr3 (356-399)||(25948895-25948938)
chr3 (348-399)||(35994738-35994788)
chr3 (354-399)||(7928458-7928503)
chr3 (354-399)||(8383265-8383310)
chr3 (354-399)||(26508118-26508163)
chr3 (354-399)||(28918009-28918054)
chr3 (356-420)||(23184080-23184144)
chr3 (356-399)||(4987299-4987342)
chr3 (361-399)||(12704015-12704053)
chr3 (347-401)||(12704656-12704710)
chr3 (347-401)||(14223852-14223906)
chr3 (354-420)||(20691306-20691372)
chr3 (347-401)||(21211294-21211348)
chr3 (347-429)||(41319309-41319391)
chr3 (347-397)||(51512182-51512232)
chr3 (347-401)||(52369781-52369835)
chr3 (354-399)||(1509547-1509592)
chr3 (354-399)||(10954960-10955005)
chr3 (362-399)||(11251986-11252023)
chr3 (354-399)||(11665952-11665997)
chr3 (354-399)||(21256992-21257037)
chr3 (348-401)||(25365468-25365521)
chr3 (354-399)||(29508452-29508497)
chr3 (354-399)||(34910325-34910370)
chr3 (354-399)||(49651792-49651837)
chr3 (354-399)||(51206359-51206404)
chr3 (354-399)||(55401083-55401128)
chr3 (355-399)||(10268493-10268537)
chr3 (355-399)||(12083911-12083955)
chr3 (355-399)||(14209121-14209165)
chr3 (359-399)||(14840302-14840342)
chr3 (354-398)||(20503474-20503518)
chr3 (355-399)||(32804547-32804591)
chr3 (355-399)||(49505161-49505205)
[»] chr6 (36 HSPs)
chr6 (355-399)||(17341671-17341715)
chr6 (354-421)||(7265599-7265666)
chr6 (349-399)||(2117084-2117134)
chr6 (347-421)||(17168462-17168536)
chr6 (347-401)||(34446571-34446625)
chr6 (354-399)||(9025500-9025545)
chr6 (354-399)||(10770680-10770725)
chr6 (354-399)||(16766705-16766750)
chr6 (354-399)||(34595142-34595187)
chr6 (355-399)||(19040360-19040404)
chr6 (355-399)||(31384928-31384972)
chr6 (356-399)||(32511674-32511717)
chr6 (361-399)||(1532248-1532286)
chr6 (360-398)||(16388245-16388283)
chr6 (354-399)||(1681766-1681811)
chr6 (354-399)||(7086803-7086848)
chr6 (356-401)||(7569176-7569221)
chr6 (354-399)||(7801162-7801207)
chr6 (354-399)||(7938124-7938169)
chr6 (354-399)||(7977836-7977881)
chr6 (354-399)||(9107376-9107421)
chr6 (354-399)||(9522899-9522944)
chr6 (354-399)||(9617442-9617487)
chr6 (354-395)||(11591876-11591917)
chr6 (354-399)||(16833316-16833361)
chr6 (354-399)||(26178687-26178732)
chr6 (354-395)||(26562701-26562742)
chr6 (354-399)||(28152107-28152151)
chr6 (354-399)||(28715303-28715348)
chr6 (354-399)||(30866150-30866195)
chr6 (362-399)||(31579239-31579276)
chr6 (354-399)||(31959167-31959212)
chr6 (354-403)||(32299279-32299328)
chr6 (363-399)||(5970123-5970159)
chr6 (354-398)||(9629392-9629436)
chr6 (355-399)||(12696332-12696376)
[»] chr8 (29 HSPs)
chr8 (347-422)||(44067501-44067576)
chr8 (354-399)||(11927092-11927137)
chr8 (347-401)||(13009492-13009546)
chr8 (374-423)||(4114229-4114278)
chr8 (354-399)||(4948660-4948705)
chr8 (354-399)||(11944673-11944718)
chr8 (354-399)||(15816135-15816180)
chr8 (354-399)||(20679401-20679446)
chr8 (354-399)||(25566849-25566894)
chr8 (354-399)||(34897093-34897138)
chr8 (355-399)||(3025559-3025603)
chr8 (354-398)||(40332200-40332244)
chr8 (351-399)||(41831943-41831991)
chr8 (354-401)||(20873075-20873122)
chr8 (354-428)||(13844602-13844676)
chr8 (361-399)||(14134707-14134745)
chr8 (355-421)||(30077394-30077460)
chr8 (354-399)||(2572062-2572107)
chr8 (351-400)||(3911117-3911166)
chr8 (354-399)||(4786344-4786389)
chr8 (354-399)||(8342980-8343025)
chr8 (356-401)||(22770968-22771013)
chr8 (354-399)||(31236583-31236628)
chr8 (354-399)||(33405390-33405435)
chr8 (354-399)||(34222955-34223000)
chr8 (356-412)||(3508047-3508103)
chr8 (355-399)||(8343324-8343368)
chr8 (365-421)||(13018267-13018323)
chr8 (355-399)||(24362209-24362253)
[»] chr1 (45 HSPs)
chr1 (350-421)||(22794080-22794151)
chr1 (353-455)||(17831536-17831638)
chr1 (354-399)||(1486715-1486760)
chr1 (350-423)||(3490392-3490465)
chr1 (354-399)||(1864886-1864931)
chr1 (354-399)||(9629906-9629951)
chr1 (354-399)||(9828052-9828097)
chr1 (356-401)||(17425101-17425146)
chr1 (354-455)||(22881622-22881723)
chr1 (354-399)||(24577192-24577237)
chr1 (354-399)||(31015051-31015096)
chr1 (354-399)||(36878469-36878514)
chr1 (354-399)||(40258939-40258984)
chr1 (355-399)||(398772-398816)
chr1 (355-399)||(7918218-7918262)
chr1 (354-398)||(18337338-18337382)
chr1 (356-399)||(113307-113350)
chr1 (348-399)||(12443460-12443511)
chr1 (348-387)||(17705586-17705625)
chr1 (354-397)||(44482240-44482283)
chr1 (355-421)||(15323149-15323215)
chr1 (355-397)||(25361896-25361938)
chr1 (361-399)||(34298444-34298482)
chr1 (354-420)||(38078667-38078733)
chr1 (361-399)||(40181879-40181917)
chr1 (354-400)||(47989504-47989550)
chr1 (354-399)||(1704998-1705043)
chr1 (354-387)||(5944303-5944336)
chr1 (356-421)||(6427336-6427401)
chr1 (354-399)||(6612177-6612222)
chr1 (354-399)||(18190114-18190159)
chr1 (354-399)||(22515893-22515938)
chr1 (360-421)||(23531790-23531851)
chr1 (356-397)||(25098563-25098604)
chr1 (354-395)||(25272494-25272535)
chr1 (354-399)||(37598840-37598884)
chr1 (347-400)||(39101181-39101234)
chr1 (354-399)||(42359455-42359500)
chr1 (354-399)||(52903257-52903302)
chr1 (349-401)||(351085-351137)
chr1 (355-399)||(10233261-10233305)
chr1 (361-397)||(19324572-19324608)
chr1 (363-399)||(27471581-27471617)
chr1 (355-387)||(35919283-35919315)
chr1 (347-399)||(49872845-49872897)
[»] chr7 (34 HSPs)
chr7 (347-401)||(43249999-43250053)
chr7 (348-403)||(12278839-12278894)
chr7 (347-401)||(5938478-5938532)
chr7 (354-400)||(15902829-15902875)
chr7 (354-399)||(11665446-11665491)
chr7 (354-399)||(19992009-19992054)
chr7 (354-399)||(24339650-24339695)
chr7 (354-399)||(26033467-26033512)
chr7 (356-399)||(25481910-25481953)
chr7 (351-401)||(4017797-4017847)
chr7 (361-403)||(16341500-16341542)
chr7 (354-400)||(23128667-23128713)
chr7 (358-399)||(1401033-1401074)
chr7 (362-399)||(2424622-2424659)
chr7 (354-399)||(3991332-3991377)
chr7 (354-399)||(5409842-5409887)
chr7 (354-399)||(7438714-7438759)
chr7 (354-399)||(9408340-9408385)
chr7 (354-399)||(20549799-20549844)
chr7 (354-399)||(21880160-21880205)
chr7 (348-401)||(23751906-23751959)
chr7 (354-399)||(26329388-26329433)
chr7 (354-399)||(27945049-27945094)
chr7 (362-399)||(29787383-29787420)
chr7 (355-452)||(42720897-42720994)
chr7 (354-414)||(7328697-7328757)
chr7 (355-399)||(10042945-10042989)
chr7 (355-399)||(17851439-17851483)
chr7 (354-398)||(19930947-19930991)
chr7 (354-394)||(22602716-22602756)
chr7 (355-399)||(22868050-22868094)
chr7 (354-402)||(23849464-23849512)
chr7 (355-399)||(32308128-32308172)
chr7 (355-399)||(35861972-35862016)
[»] chr4 (32 HSPs)
chr4 (347-401)||(24343513-24343567)
chr4 (350-399)||(14126113-14126162)
chr4 (354-399)||(54580029-54580074)
chr4 (366-420)||(12077815-12077869)
chr4 (354-399)||(8423724-8423769)
chr4 (347-420)||(8820395-8820468)
chr4 (350-399)||(22440602-22440651)
chr4 (354-399)||(29205452-29205497)
chr4 (355-399)||(28964255-28964299)
chr4 (356-399)||(11596360-11596403)
chr4 (347-421)||(20521850-20521922)
chr4 (358-421)||(30838196-30838259)
chr4 (356-399)||(36635332-36635375)
chr4 (361-399)||(903930-903968)
chr4 (354-400)||(12895280-12895326)
chr4 (351-401)||(19230312-19230362)
chr4 (347-401)||(20743277-20743331)
chr4 (354-399)||(5775364-5775409)
chr4 (354-399)||(6485617-6485662)
chr4 (354-399)||(12797344-12797388)
chr4 (354-399)||(21945511-21945556)
chr4 (354-399)||(23292992-23293037)
chr4 (354-399)||(30982884-30982929)
chr4 (347-400)||(31243547-31243600)
chr4 (344-401)||(32910557-32910614)
chr4 (354-399)||(35157991-35158036)
chr4 (354-399)||(40613458-40613503)
chr4 (355-399)||(3947773-3947817)
chr4 (347-421)||(20633471-20633542)
chr4 (362-398)||(21873385-21873421)
chr4 (362-398)||(21929246-21929282)
chr4 (347-399)||(40481645-40481696)
[»] scaffold0044 (1 HSPs)
scaffold0044 (354-398)||(53189-53233)
[»] chr2 (29 HSPs)
chr2 (362-421)||(28412336-28412395)
chr2 (351-401)||(10535762-10535812)
chr2 (354-399)||(12668429-12668474)
chr2 (354-399)||(30404856-30404901)
chr2 (354-399)||(30717536-30717581)
chr2 (354-399)||(34691811-34691856)
chr2 (354-399)||(34714223-34714268)
chr2 (354-418)||(18420440-18420504)
chr2 (356-399)||(18622614-18622657)
chr2 (356-399)||(21616770-21616813)
chr2 (347-397)||(11308003-11308053)
chr2 (347-401)||(19573984-19574038)
chr2 (362-420)||(21782832-21782890)
chr2 (361-399)||(28677917-28677955)
chr2 (354-399)||(2438725-2438770)
chr2 (354-399)||(5367200-5367245)
chr2 (355-400)||(17776594-17776639)
chr2 (354-399)||(23718034-23718079)
chr2 (354-399)||(24105706-24105751)
chr2 (347-400)||(25544488-25544541)
chr2 (355-420)||(35449500-35449565)
chr2 (354-399)||(36756350-36756395)
chr2 (354-399)||(37411250-37411295)
chr2 (354-399)||(42832282-42832327)
chr2 (354-399)||(44860328-44860373)
chr2 (355-399)||(21374706-21374750)
chr2 (355-399)||(27286299-27286343)
chr2 (355-399)||(31808085-31808129)
chr2 (355-399)||(39323272-39323316)
[»] scaffold0050 (1 HSPs)
scaffold0050 (354-399)||(70286-70331)
[»] scaffold0223 (1 HSPs)
scaffold0223 (355-399)||(20180-20224)
[»] scaffold0103 (1 HSPs)
scaffold0103 (356-399)||(51819-51862)
[»] scaffold0598 (1 HSPs)
scaffold0598 (347-421)||(8052-8126)
[»] scaffold0361 (1 HSPs)
scaffold0361 (357-399)||(14538-14580)
[»] scaffold0007 (1 HSPs)
scaffold0007 (351-401)||(225271-225321)
[»] scaffold0652 (1 HSPs)
scaffold0652 (354-399)||(468-513)
[»] scaffold0236 (1 HSPs)
scaffold0236 (354-399)||(25774-25819)
[»] scaffold0171 (2 HSPs)
scaffold0171 (354-387)||(23440-23473)
scaffold0171 (355-387)||(23531-23563)
[»] scaffold0123 (1 HSPs)
scaffold0123 (354-395)||(44531-44572)
[»] scaffold0036 (1 HSPs)
scaffold0036 (354-399)||(9753-9798)
[»] scaffold0027 (1 HSPs)
scaffold0027 (354-399)||(46690-46735)
[»] scaffold0021 (1 HSPs)
scaffold0021 (354-399)||(130490-130535)
[»] scaffold0020 (1 HSPs)
scaffold0020 (354-399)||(135318-135363)
[»] scaffold0011 (1 HSPs)
scaffold0011 (354-399)||(17755-17800)
[»] scaffold0246 (1 HSPs)
scaffold0246 (347-399)||(19584-19635)
[»] scaffold0136 (1 HSPs)
scaffold0136 (355-399)||(3856-3900)
[»] scaffold0066 (1 HSPs)
scaffold0066 (347-399)||(33363-33414)
[»] scaffold0004 (1 HSPs)
scaffold0004 (355-399)||(92815-92859)


Alignment Details
Target: chr5 (Bit Score: 316; Significance: 1e-178; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 95 - 455
Target Start/End: Original strand, 5467725 - 5468091
Alignment:
Q  95 agcattaactcatagtgcgtgctattacaggcatgaagataaagtttatcaatatgctttttgttgcctttctttcagttctttggtccatgtagtttat 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5467725 agcattaactcatagtgcgtgctattacaggcatgaagataaagtttatcaatatgctttttgttgcctttctttcagttctttggtccatgtagtttat 5467824  T
Q  195 ctttttgtcgcttatgctatcaattgaattgcatgttcaatatctctgtaaccacagtcatggtgtgagccatgctttcactctcaccccatgaatcaca 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5467825 ctttttgtcgcttatgctatcaattgaattgcatgttcaatatctctgtaaccacagtcatggtgtgagccatgctttcactctcaccccatgaatcaca 5467924  T
Q  295 aacactttttagagtagccttgtcccgatatcgaacacgtgtcgtatgtgataccgacacgacacttataattacactgaattatgtggttttatcaaat 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  5467925 aacactttttagagtagccttgtcccgatatcgaacacgtgtcgtatgtgacaccgacacgacacctataattacactgaattatgtgattttatcaaat 5468024  T
Q  395 tattatcagcattgacgtgtcag------tgtcgtatctgatatatgtgtctatatccgtgcttcat 455  Q
    ||||||| | |||||||||||||      |||| ||||| |||||||||||||||||||||||||||    
T  5468025 tattatcggtattgacgtgtcagtgtctatgtcttatctaatatatgtgtctatatccgtgcttcat 5468091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 420
Target Start/End: Original strand, 7997166 - 7997238
Alignment:
Q  348 ccgacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgt 420  Q
    |||||||||||||||||||||||||| ||||| |  |||| ||||||||||||| |  ||| |||||||||||    
T  7997166 ccgacacgacacttataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtcagtgt 7997238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 420
Target Start/End: Original strand, 24906307 - 24906373
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgt 420  Q
    |||||||| |||||||||||||||||||  |||| ||||||||||||| |  ||| |||||||||||    
T  24906307 cgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 400
Target Start/End: Complemental strand, 25863261 - 25863211
Alignment:
Q  350 gacacgacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    |||||||||||||||||||||||||||||| |  |||| ||||||||||||    
T  25863261 gacacgacacttataattacactgaattatatcattttctcaaattattat 25863211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 6247675 - 6247630
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  6247675 cgacacttgtaattacactgaattatgtgattttttcaaattatta 6247630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 21191062 - 21191107
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  21191062 cgacacttgtaattacactgaattatgtgattttttcaaattatta 21191107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 21576751 - 21576796
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  21576751 cgacacttgtaattacactgaattatgtgattttttcaaattatta 21576796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 28588680 - 28588725
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||    
T  28588680 cgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 399
Target Start/End: Complemental strand, 31264495 - 31264446
Alignment:
Q  350 gacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||| |||||||||||||||||  |||| |||||||||||    
T  31264495 gacacgacacttatgattacactgaattatgtcattttctcaaattatta 31264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 39698593 - 39698549
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||    
T  39698593 gacacttgtaattacactgaattatgtgattttttcaaattatta 39698549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 6471897 - 6471940
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||| |||||||||||||||||||||| |||| |||||||||||    
T  6471897 acacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Original strand, 13287405 - 13287452
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||| || ||||||||||||||||| |||| |||||||||||||    
T  13287405 cgacacttgtagttacactgaattatgtgattttttcaaattattatc 13287452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 18586291 - 18586361
Alignment:
Q  350 gacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    |||||||||| ||||||||||||| |||||||  |||| ||||||||||||| | || ||| ||||||||||    
T  18586291 gacacgacacctataattacactgtattatgtcatttt-tcaaattattatccgtatcgacatgtcagtgtc 18586361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 378
Target Start/End: Complemental strand, 9929683 - 9929649
Alignment:
Q  344 gataccgacacgacacttataattacactgaatta 378  Q
    |||||||||||||||| ||||||||||||||||||    
T  9929683 gataccgacacgacacatataattacactgaatta 9929649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 26205763 - 26205833
Alignment:
Q  351 acacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    ||||||||| ||| |||||||||||||||||  |||| ||||| | ||||| | || ||||||||||||||    
T  26205763 acacgacacctatgattacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtcagtgtc 26205833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 3966556 - 3966511
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||||||||||||||||| |||| |||| |||||||||||    
T  3966556 cgacacatataattacactgaattgtgtgattttctcaaattatta 3966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7677758 - 7677713
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||| |||||||||||||| |||| |||||||||||    
T  7677758 cgacacttctaattgcactgaattatgtgattttttcaaattatta 7677713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 14674322 - 14674277
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||    
T  14674322 cgacacttgtaattacactaaattatgtgattttttcaaattatta 14674277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 23015995 - 23016040
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| |||||| ||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 30502394 - 30502439
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||| ||| |||| |||||||||||    
T  30502394 cgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 30542737 - 30542782
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||| ||| |||| |||||||||||    
T  30542737 cgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 31084376 - 31084331
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||| ||||||||||| |||| |||||||||||    
T  31084376 cgacacttgtaattacattgaattatgtgattttttcaaattatta 31084331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 41091263 - 41091308
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| |||||| ||||    
T  41091263 cgacacatataattacactgaattatgtgattttctcaaatcatta 41091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 42893413 - 42893368
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||||||||| |||||||| |||| |||||||||||    
T  42893413 cgacacttgtaattacactggattatgtgattttttcaaattatta 42893368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 43001851 - 43001786
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    |||||| |||||||||||||||||||  |||| ||||||||||| |||  | ||| ||||||||||    
T  43001851 acacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtc 43001786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 397
Target Start/End: Complemental strand, 10022678 - 10022642
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattat 397  Q
    ||||||||||||||||||| || ||||||||||||||    
T  10022678 tataattacactgaattatatgattttatcaaattat 10022642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 263341 - 263445
Alignment:
Q  323 tatcgaacacgtgtcgtatgtgataccgacacgaca------cttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtca 416  Q
    ||||||||||||||||| | ||| ||||||||||||      ||||||||||||||||||||||||||||| ||||||||||| |||  ||||| |||||    
T  263341 tatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtca 263440  T
Q  417 gtgtc 421  Q
    |||||    
T  263441 gtgtc 263445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 34307755 - 34307831
Alignment:
Q  323 tatcgaacacgtgtcgtatgtgataccgacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| ||||||||| |  || ||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  34307755 tatcgaagacgtgtcgtgtccgacaccgacacgacacttataattacactgaaatatgtgattttctcaaattatta 34307831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 17005625 - 17005670
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||||||| || ||||||||||||||||    
T  17005625 cgacacttataattacactgaattatatgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 401
Target Start/End: Original strand, 24205041 - 24205094
Alignment:
Q  348 ccgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||||||||||||||||||||| |||||||  |||| |||||||||||||    
T  24205041 ccgacacgacacttataattacactgtattatgtcattttctcaaattattatc 24205094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 25948895 - 25948938
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  25948895 acacttataattacactgaattatgtgattttttcaaattatta 25948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 35994738 - 35994788
Alignment:
Q  348 ccgacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  35994738 ccgacacgacacttgtaattacactgaattatgtgatttt-tcaaattatta 35994788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7928503 - 7928458
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||    
T  7928503 cgacacatataattacactgaattatgtgattttttcaaattatta 7928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 8383310 - 8383265
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||||||| || |||| |||||||||||    
T  8383310 cgacacttataattacactgaattatatgattttctcaaattatta 8383265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 26508163 - 26508118
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  26508163 cgacacttgtaattacactgaattatgtgattttttcaaattatta 26508118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 28918054 - 28918009
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  28918054 cgacacttgtaattacactgaattatgtgattttttcaaattatta 28918009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 420
Target Start/End: Original strand, 23184080 - 23184144
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgt 420  Q
    |||| ||||||||||  ||||||| || |||| ||||||||||||||  ||||||||||||||||    
T  23184080 acacatataattacatagaattatatgattttgtcaaattattatcaatattgacgtgtcagtgt 23184144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 4987299 - 4987342
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||| |||| |||||||||||    
T  4987299 acacttgtaattacactgaattatgtgattttttcaaattatta 4987342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 12704053 - 12704015
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  12704053 tataattacactgaattatgtgcttttctcaaattatta 12704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 401
Target Start/End: Original strand, 12704656 - 12704710
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||||| ||| |||||| ||||||||||  |||| |||||||||||||    
T  12704656 accgacacgacacctatgattacattgaattatgtcattttttcaaattattatc 12704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 401
Target Start/End: Original strand, 14223852 - 14223906
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||||||||| | |||||| |||||| | ||||| |||||||||||||    
T  14223852 accgacacgacacttatgaatacactaaattatatcgttttctcaaattattatc 14223906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 420
Target Start/End: Complemental strand, 20691372 - 20691306
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgt 420  Q
    |||||| ||| |||||||||||||||||  |||| |||||||||||||||  |  ||||||||||||    
T  20691372 cgacacatatgattacactgaattatgtcattttctcaaattattatcagtttctacgtgtcagtgt 20691306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 21211348 - 21211294
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||||||||  |||||||||||||| |||||  |||| |||||||||||||    
T  21211348 accgacacgacacccataattacactgaactatgtaattttctcaaattattatc 21211294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 429
Target Start/End: Original strand, 41319309 - 41319391
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtcgtatctga 429  Q
    ||||||||||||| || ||||||| ||||||||||  |||| ||||||||||||  |  | |||||||| ||||||| |||||    
T  41319309 accgacacgacacatacaattacattgaattatgtcattttttcaaattattattggtgtcgacgtgtccgtgtcgtgtctga 41319391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 397
Target Start/End: Original strand, 51512182 - 51512232
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattat 397  Q
    ||||||||||||| ||| ||| || ||||||||||| ||||||||||||||    
T  51512182 accgacacgacacatatgattccattgaattatgtgattttatcaaattat 51512232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 52369835 - 52369781
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||||| ||| |||||| ||||||||||  |||| |||||||||||||    
T  52369835 accgacacgacacctatgattacattgaattatgtaattttctcaaattattatc 52369781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 1509592 - 1509547
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||    
T  1509592 cgacacttgtaattacactaaattatgtgattttttcaaattatta 1509547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 10955005 - 10954960
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| | |||||||||||||||||| |||| |||||||||||    
T  10955005 cgacacttgtgattacactgaattatgtgattttttcaaattatta 10954960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Complemental strand, 11252023 - 11251986
Alignment:
Q  362 ataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  11252023 ataattacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 11665997 - 11665952
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||| |||| |||| ||||||||||||||||    
T  11665997 cgacacatataattacactaaattgtgtgattttatcaaattatta 11665952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 21256992 - 21257037
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||| ||||||||||||| |||| |||||||||||    
T  21256992 cgacacttgtaattatactgaattatgtgattttttcaaattatta 21257037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 401
Target Start/End: Complemental strand, 25365521 - 25365468
Alignment:
Q  348 ccgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||||||||||| ||||||| |||||||||  | || |||||||||||||    
T  25365521 ccgacacgacacttatgattacaccgaattatgtcatattctcaaattattatc 25365468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 29508497 - 29508452
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||||||||||||||||||| || |||| |||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattatta 29508452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 34910370 - 34910325
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||| ||| |||||||||||||||||||| |||| |||||||||||    
T  34910370 cgactcttgtaattacactgaattatgtgattttttcaaattatta 34910325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 49651792 - 49651837
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||| ||||||||||| |||| |||||||||||    
T  49651792 cgacacttgtaattacagtgaattatgtgattttttcaaattatta 49651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 51206359 - 51206404
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| || ||||||||||||||||| |||| |||||||||||    
T  51206359 cgacacttgtatttacactgaattatgtgattttttcaaattatta 51206404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 55401128 - 55401083
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||    
T  55401128 cgacacttgtaattacactaaattatgtgattttttcaaattatta 55401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 10268493 - 10268537
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||| ||||||||| |||| |||||||||||    
T  10268493 gacacttgtaattacactaaattatgtgattttttcaaattatta 10268537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 12083955 - 12083911
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| ||||||||||||||||||| ||||| |||| ||||||    
T  12083955 gacacttgtaattacactgaattatgtagttttctcaatttatta 12083911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 14209165 - 14209121
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||| |||| | |||||||||    
T  14209165 gacacttgtaattacactgaattatgtgattttttaaaattatta 14209121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 14840302 - 14840342
Alignment:
Q  359 cttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||||| |||| | |||||||||    
T  14840302 cttataattacactgaattatgtgattttctgaaattatta 14840342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 20503518 - 20503474
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatt 398  Q
    |||||||| |||||||||||||||||||  |||| ||||||||||    
T  20503518 cgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 32804547 - 32804591
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||| ||||||||| |||| |||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattatta 32804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 49505161 - 49505205
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||| ||||||||| |||| |||||||||||    
T  49505161 gacacatataattacactaaattatgtgattttctcaaattatta 49505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 17341671 - 17341715
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 7265599 - 7265666
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    |||||| |||||||||||||||||||||| |||| ||||||||||| | |  ||| ||||||||||||    
T  7265599 cgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 2117134 - 2117084
Alignment:
Q  349 cgacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||| || ||||||||||| |||| |||||||||||    
T  2117134 cgacacgacacttataattgcattgaattatgtgattttttcaaattatta 2117084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 421
Target Start/End: Original strand, 17168462 - 17168536
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    ||||||||||||| ||| |||||||| |||||| |  |||| |||||||||||||||  ||| ||||||||||||    
T  17168462 accgacacgacacctattattacactaaattatatcattttctcaaattattatcagtgttggcgtgtcagtgtc 17168536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 34446625 - 34446571
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||||| ||| |||||||||||||||||  |||| |||||||||||||    
T  34446625 accgacacgacacctatgattacactgaattatgtcattttctcaaattattatc 34446571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 9025500 - 9025545
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||    
T  9025500 cgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 10770680 - 10770725
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  10770680 cgacacttgtaattacactgaattatgtgattttttcaaattatta 10770725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 16766750 - 16766705
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  16766750 cgacacttgtaattacactgaattatgtgattttttcaaattatta 16766705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 34595187 - 34595142
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  34595187 cgacacttgtaattacactgaattatgtgattttttcaaattatta 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 19040404 - 19040360
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  19040404 gacacatataattacactgaattatgtgattttctcaaattatta 19040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 31384972 - 31384928
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||    
T  31384972 gacacttgtaattacactgaattatgtgattttttcaaattatta 31384928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 32511674 - 32511717
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||||||||| |||| | |||||||||    
T  32511674 acacttataattacactgaattatgtgattttcttaaattatta 32511717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 1532286 - 1532248
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  1532286 tataattacactgaattatgtaattttatcaaattatta 1532248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 398
Target Start/End: Original strand, 16388245 - 16388283
Alignment:
Q  360 ttataattacactgaattatgtggttttatcaaattatt 398  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  16388245 ttataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 1681811 - 1681766
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||| ||| |||| |||||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattatta 1681766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7086848 - 7086803
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||| ||||||||| |||| |||||||||||    
T  7086848 cgacacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 7569176 - 7569221
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||| |||||||||||||||||||||  |||| |||||||||||||    
T  7569176 acacctataattacactgaattatgtaattttctcaaattattatc 7569221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 7801162 - 7801207
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||||| |||||||||||| |||| |||||||||||    
T  7801162 cgacacttgtaattacgctgaattatgtgattttttcaaattatta 7801207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7938169 - 7938124
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||| |||||| || |||| |||||||||||    
T  7938169 cgacacttataattacactaaattatatgattttttcaaattatta 7938124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 7977836 - 7977881
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||  |||| |||||||||||    
T  7977836 cgacacttgtaattacactgaattatgtaattttttcaaattatta 7977881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 9107376 - 9107421
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||||||||||||| |||| |||| |||||||||||    
T  9107376 cgacacttgtaattacactgaattttgtgattttttcaaattatta 9107421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 9522944 - 9522899
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| | |||||||||    
T  9522944 cgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 9617487 - 9617442
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||| ||||||||||| |||| |||||||||||    
T  9617487 cgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 395
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaatt 395  Q
    |||||| |||||||||||||||||||||| |||| |||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 16833361 - 16833316
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||||||||||| |||||| |||| |||||||||||    
T  16833361 cgacacttgtaattacactgaagtatgtgattttttcaaattatta 16833316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 26178687 - 26178732
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||| |||||||| ||||||||| ||||||||||||||||    
T  26178687 cgacacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 395
Target Start/End: Complemental strand, 26562742 - 26562701
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaatt 395  Q
    |||||| |||||||||||||||||||||| |||| |||||||    
T  26562742 cgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 28152151 - 28152107
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  28152151 cgacacttgtaattacactgaattatgtgatttt-tcaaattatta 28152107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 28715348 - 28715303
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||  |||| |||||||||||    
T  28715348 cgacacttgtaattacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 30866150 - 30866195
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||| ||||||||||| |||| |||||||||||    
T  30866150 cgacacatataattacattgaattatgtgattttctcaaattatta 30866195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Original strand, 31579239 - 31579276
Alignment:
Q  362 ataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 31959212 - 31959167
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||||||||| |||||||| |||| |||||||||||    
T  31959212 cgacacttgtaattacactgcattatgtgattttttcaaattatta 31959167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 403
Target Start/End: Complemental strand, 32299328 - 32299279
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatcag 403  Q
    |||||| ||||| |||| ||||||||||| |||| |||||||||||||||    
T  32299328 cgacacgtataactacattgaattatgtgattttctcaaattattatcag 32299279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 5970123 - 5970159
Alignment:
Q  363 taattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||| |||| |||||||||||    
T  5970123 taattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 9629436 - 9629392
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatt 398  Q
    |||||| |||||||||| ||||||||||| |||| ||||||||||    
T  9629436 cgacacatataattacattgaattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 12696376 - 12696332
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||  |||| |||||||||||    
T  12696376 gacacttgtaattacactgaattatgtaattttttcaaattatta 12696332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 422
Target Start/End: Complemental strand, 44067576 - 44067501
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtcg 422  Q
    ||||||||||||||||||||||||||| |||||||  |||| ||||||||||||| |  | | |||||||||||||    
T  44067576 accgacacgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcg 44067501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 11927092 - 11927137
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||    
T  11927092 cgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 401
Target Start/End: Original strand, 13009492 - 13009546
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||||||||| |||||||| |||||| | ||||| |||||||||||||    
T  13009492 accgacacgacacttatgattacactaaattatattgttttctcaaattattatc 13009546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 4114229 - 4114278
Alignment:
Q  374 aattatgtggttttatcaaattattatcagcattgacgtgtcagtgtcgt 423  Q
    ||||||||  |||| ||||||||||||| |||||||||||||||||||||    
T  4114229 aattatgtcattttctcaaattattatcggcattgacgtgtcagtgtcgt 4114278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 4948705 - 4948660
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  4948705 cgacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 11944718 - 11944673
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  11944718 cgacacatataattacactgagttatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 15816135 - 15816180
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||    
T  15816135 cgacacttataattacactaaattatgtgattttttcaaattatta 15816180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 20679401 - 20679446
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||    
T  20679401 cgacacttataattacactgaactatgtgattttctcaaattatta 20679446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 25566894 - 25566849
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  25566894 cgacacttgtaattacactgaattatgtgattttttcaaattatta 25566849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 34897138 - 34897093
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||    
T  34897138 cgacacatataattacactgaattatgtgattttctcaaattatta 34897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 3025603 - 3025559
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  3025603 gacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 40332244 - 40332200
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatt 398  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||    
T  40332244 cgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 399
Target Start/End: Original strand, 41831943 - 41831991
Alignment:
Q  351 acacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||| || ||||||||||||||||| |||| |||||||||||    
T  41831943 acacgacacttgtagttacactgaattatgtgattttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 20873122 - 20873075
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||||    
T  20873122 cgacacttgtaattacactaaattatgtgattttttcaaattattatc 20873075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 428
Target Start/End: Original strand, 13844602 - 13844676
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtcgtatctg 428  Q
    |||||| |||||||||||| ||||||||| |||| ||||||||||| |||  | | |||||| ||||||| ||||    
T  13844602 cgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtcgtgtctg 13844676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 14134745 - 14134707
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  14134745 tataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 30077394 - 30077460
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    ||||||| |||||||||||||||||||| | || ||||||||||| | || ||| |||||| |||||    
T  30077394 gacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtc 30077460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 2572062 - 2572107
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||    
T  2572062 cgacacttgtaattacactaaattatgtgattttttcaaattatta 2572107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 400
Target Start/End: Complemental strand, 3911166 - 3911117
Alignment:
Q  351 acacgacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    ||||||||||||| ||| |||||||||||||| |||||| |||| |||||    
T  3911166 acacgacacttatgatttcactgaattatgtgattttattaaatgattat 3911117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 4786344 - 4786389
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| | |||||||||    
T  4786344 cgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 8343025 - 8342980
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||    
T  8343025 cgacacttgtaattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 22771013 - 22770968
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||| ||| |||||| |||||||||| |||||||||||||||||||    
T  22771013 acacatatgattacattgaattatgttgttttatcaaattattatc 22770968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 31236583 - 31236628
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||| ||||||||||| |||| |||||||||||    
T  31236583 cgacacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 33405390 - 33405435
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||| ||||||||| |||| |||||||||||    
T  33405390 cgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 34223000 - 34222955
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||| ||||||||| |||||| |||||||||    
T  34223000 cgacacatataattacacttaattatgtgattttattaaattatta 34222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 3508103 - 3508047
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattattatcagcattgacgt 412  Q
    |||| ||| |||||| ||||||||||  |||| |||||||||||||||||| |||||    
T  3508103 acacatatgattacattgaattatgttattttctcaaattattatcagcatcgacgt 3508047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 8343368 - 8343324
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||| ||||||||| |||| |||||||||||    
T  8343368 gacacttgtaattacactaaattatgtgattttttcaaattatta 8343324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 421
Target Start/End: Complemental strand, 13018323 - 13018267
Alignment:
Q  365 attacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    |||||||| ||||||||| |||| ||||||||||| | | |||||||||| ||||||    
T  13018323 attacactaaattatgtgattttgtcaaattattaacggtattgacgtgttagtgtc 13018267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 24362209 - 24362253
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||||| || | |||||||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattatta 24362253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 22794080 - 22794151
Alignment:
Q  350 gacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    |||||||||| ||||||||||||| |||||||  |||| ||||||||||||| |  ||||||||||||||||    
T  22794080 gacacgacacctataattacactgtattatgtcattttttcaaattattatccgtgttgacgtgtcagtgtc 22794151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 455
Target Start/End: Original strand, 17831536 - 17831638
Alignment:
Q  353 acgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtcgtatctgatatatgtgtctatatccgtgctt 452  Q
    ||||||| ||| |||||||||||| ||||| |||| ||||||||||| | |  | | ||||||||||||||||| | | | ||||||| |||||||||||    
T  17831536 acgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcgtatccggtgtctgtgtctgtatccgtgctt 17831635  T
Q  453 cat 455  Q
    |||    
T  17831636 cat 17831638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 1486715 - 1486760
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  1486715 cgacacttataattacactgaattatgtgattttttcaaattatta 1486760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 3490392 - 3490465
Alignment:
Q  350 gacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtcgt 423  Q
    |||||||||||| |||||||||||||| |||| ||||| ||||||||||| |||  | | ||||||||||||||    
T  3490392 gacacgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgtcgt 3490465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 1864886 - 1864931
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||    
T  1864886 cgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 9629906 - 9629951
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||    
T  9629906 cgacacttataatcacactgaattatatgattttatcaaattatta 9629951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 9828097 - 9828052
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| || ||||||||||||||||||| ||||||||||||||||    
T  9828097 cgacacataaaattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 17425101 - 17425146
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||| |||||||||| ||||||||||| ||||||||||||||||||    
T  17425101 acacatataattacattgaattatgtgattttatcaaattattatc 17425146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 455
Target Start/End: Original strand, 22881622 - 22881723
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtcgtatctgatatatgtgtctatatccgtgcttc 453  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||   |  | | |||||||||||||| || | | |  |||||||||||||||||||    
T  22881622 cgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtctatatccgtgcttc 22881721  T
Q  454 at 455  Q
    ||    
T  22881722 at 22881723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 24577192 - 24577237
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  24577192 cgacacttgtaattacactgaattatgtgattttttcaaattatta 24577237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 31015096 - 31015051
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  31015096 cgacacttgtaattacactgaattatgtgattttctcaaattatta 31015051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 36878514 - 36878469
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||    
T  36878514 cgacacctataattacactgaattatgtgattttctcaaattatta 36878469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 40258939 - 40258984
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  40258939 cgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 398772 - 398816
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattatta 398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 7918218 - 7918262
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  7918218 gacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 18337382 - 18337338
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatt 398  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||    
T  18337382 cgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Complemental strand, 113350 - 113307
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||| |||| |||||||||||    
T  113350 acacttgtaattacactgaattatgtgattttttcaaattatta 113307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 12443460 - 12443511
Alignment:
Q  348 ccgacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||| || ||||||||||||||||||| |||| |||||||||||    
T  12443460 ccgacacgtcacatacaattacactgaattatgtgattttctcaaattatta 12443511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 387
Target Start/End: Original strand, 17705586 - 17705625
Alignment:
Q  348 ccgacacgacacttataattacactgaattatgtggtttt 387  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  17705586 ccgacacgacacatataattacactgaattatgtgatttt 17705625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 397
Target Start/End: Complemental strand, 44482283 - 44482240
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattat 397  Q
    |||||| |||||||||||||||||||||| |||| |||||||||    
T  44482283 cgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 421
Target Start/End: Complemental strand, 15323215 - 15323149
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    |||||||| ||||||||| ||||||||| |||| ||||||||||| | | || ||| ||||||||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtc 15323149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 25361938 - 25361896
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattat 397  Q
    ||||| |||||||||||||||||||||| |||| |||||||||    
T  25361938 gacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 34298482 - 34298444
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattatta 34298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 420
Target Start/End: Original strand, 38078667 - 38078733
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgt 420  Q
    |||||||| |||||||| ||||||||||| |||| ||||||||||| | |  | |||||||||||||    
T  38078667 cgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt 38078733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 40181917 - 40181879
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  40181917 tataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 400
Target Start/End: Complemental strand, 47989550 - 47989504
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    |||||||| |||||||||||||||||||| |||| | ||||||||||    
T  47989550 cgacacttgtaattacactgaattatgtgatttttttaaattattat 47989504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 1704998 - 1705043
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||||| |||||||||||| |||| |||||||||||    
T  1704998 cgacacttgtaattaccctgaattatgtgattttttcaaattatta 1705043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 387
Target Start/End: Complemental strand, 5944336 - 5944303
Alignment:
Q  354 cgacacttataattacactgaattatgtggtttt 387  Q
    ||||||||||||||||||||||||||||| ||||    
T  5944336 cgacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 6427401 - 6427336
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    |||| |||||||||| ||||||||||| |||| ||||||||||| | |  ||| ||||||||||||    
T  6427401 acacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 6427336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 6612177 - 6612222
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||  |||| |||||||||||    
T  6612177 cgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 18190114 - 18190159
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||  |||| |||||||||||    
T  18190114 cgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 22515893 - 22515938
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||    
T  22515893 cgacacttgtaattacactaaattatgtgattttttcaaattatta 22515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 23531790 - 23531851
Alignment:
Q  360 ttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    ||||||||||| ||||||||||| | || ||||||||||| ||| ||||| ||||| |||||    
T  23531790 ttataattacattgaattatgtgatattttcaaattattagcagtattgaagtgtcggtgtc 23531851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 25098563 - 25098604
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattat 397  Q
    |||| |||||||||||||||||||||| |||| |||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattat 25098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 395
Target Start/End: Complemental strand, 25272535 - 25272494
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaatt 395  Q
    ||||||||||||||||||| ||||||||| |||| |||||||    
T  25272535 cgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 37598884 - 37598840
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||    
T  37598884 cgacacttataattacactgaatt-tgtgattttttcaaattatta 37598840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 39101181 - 39101234
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    ||||| ||||||| |||||||||||| ||||||||  |||| ||||||||||||    
T  39101181 accgaaacgacacctataattacacttaattatgttattttctcaaattattat 39101234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 42359455 - 42359500
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||||||||||||| |||| |||| |||||||||||    
T  42359455 cgacacttgtaattacactgaattttgtgattttttcaaattatta 42359500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 52903302 - 52903257
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||||||||||||||||||| || |||||| |||||||||    
T  52903302 cgacacatataattacactgaattatatgattttattaaattatta 52903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 351085 - 351137
Alignment:
Q  349 cgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||| || ||| ||| || ||||||||||| ||||||||||||||||||    
T  351085 cgacacgatacatatgattccattgaattatgtgattttatcaaattattatc 351137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 10233305 - 10233261
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||||| |||| |||| ||||||    
T  10233305 gacacatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 397
Target Start/End: Complemental strand, 19324608 - 19324572
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattat 397  Q
    |||||||||||||||||||||| |||| |||||||||    
T  19324608 tataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 27471581 - 27471617
Alignment:
Q  363 taattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||| |||| |||||||||||    
T  27471581 taattacactgaattatgtgcttttctcaaattatta 27471617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 387
Target Start/End: Original strand, 35919283 - 35919315
Alignment:
Q  355 gacacttataattacactgaattatgtggtttt 387  Q
    |||||||||||||||||||||||||||| ||||    
T  35919283 gacacttataattacactgaattatgtgatttt 35919315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 49872897 - 49872845
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| ||||||| ||||||||||||||||||| | ||||| |||||| ||||    
T  49872897 accgatacgacacatataattacactgaattatatagttttctcaaatgatta 49872845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 43250053 - 43249999
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||||||||||||||||||| |||||||  |||| |||||||||||||    
T  43250053 accgacacgacacttataattacactgtattatgtcattttctcaaattattatc 43249999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 403
Target Start/End: Complemental strand, 12278894 - 12278839
Alignment:
Q  348 ccgacacgacacttataattacactgaattatgtggttttatcaaattattatcag 403  Q
    |||||||||||| |||||||||||||||||||||  |||| | |||||||||||||    
T  12278894 ccgacacgacacatataattacactgaattatgtcattttcttaaattattatcag 12278839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 5938532 - 5938478
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||| |||| |||||||| ||||||||||||  ||||||||||||||||||    
T  5938532 accgacacaacacctataattatactgaattatgttattttatcaaattattatc 5938478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 400
Target Start/End: Complemental strand, 15902875 - 15902829
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||    
T  15902875 cgacacatataattacactaaattatgtgattttatcaaattattat 15902829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 11665446 - 11665491
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||    
T  11665446 cgacacttataattagactgaattatgtgattttttcaaattatta 11665491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 19992054 - 19992009
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||    
T  19992054 cgacacttataattacactgaaatatgtgattttctcaaattatta 19992009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 24339695 - 24339650
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  24339695 cgacacttgtaattacactgaattatgtgattttttcaaattatta 24339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 26033467 - 26033512
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  26033467 cgacacttgtaattacactgaattatgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Complemental strand, 25481953 - 25481910
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||| |||| |||||||||||    
T  25481953 acacttgtaattacactgaattatgtgattttttcaaattatta 25481910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 4017797 - 4017847
Alignment:
Q  351 acacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||||| |||||||| |||||| | ||||| |||||||||||||    
T  4017797 acacgacacttatgattacactaaattatatcgttttctcaaattattatc 4017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 403
Target Start/End: Complemental strand, 16341542 - 16341500
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattattatcag 403  Q
    |||||||||||| ||||||||| |||| |||||||||||||||    
T  16341542 tataattacacttaattatgtgattttctcaaattattatcag 16341500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 400
Target Start/End: Original strand, 23128667 - 23128713
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||||||    
T  23128667 cgacacatatgattacactgaattatatggttttctcaaattattat 23128713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 399
Target Start/End: Complemental strand, 1401074 - 1401033
Alignment:
Q  358 acttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||||||  ||| |||||||||||    
T  1401074 acttataattacactgaattatgtgagtttctcaaattatta 1401033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Complemental strand, 2424659 - 2424622
Alignment:
Q  362 ataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattatta 2424622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 3991377 - 3991332
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||| ||||||||||||| |||| |||||||||||    
T  3991377 cgacacttgtaattatactgaattatgtgattttttcaaattatta 3991332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 5409842 - 5409887
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||| |||||||||||||| |||| |||||||||||    
T  5409842 cgacacttgtaattgcactgaattatgtgattttttcaaattatta 5409887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7438759 - 7438714
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||| ||||||||||| |||| |||||||||||    
T  7438759 cgacacttgtaattacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 9408340 - 9408385
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||    
T  9408340 cgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 20549844 - 20549799
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||| ||| |||| |||||||||||    
T  20549844 cgacacatataattacactgaattacgtgattttctcaaattatta 20549799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 21880205 - 21880160
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||  |||| |||||||||||    
T  21880205 cgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 401
Target Start/End: Complemental strand, 23751959 - 23751906
Alignment:
Q  348 ccgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||||||| ||| |||||||| |||||| |  ||||||||||||||||||    
T  23751959 ccgacacgacacctatgattacactaaattatatcattttatcaaattattatc 23751906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 26329388 - 26329433
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||||||||||||||||| |||| |||| |||||||||||    
T  26329388 cgacacatataattacactgaattgtgtgtttttctcaaattatta 26329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 27945094 - 27945049
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||  |||| |||||||||||    
T  27945094 cgacacttgtaattacactgaattatgtaattttctcaaattatta 27945049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Original strand, 29787383 - 29787420
Alignment:
Q  362 ataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattatta 29787420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 452
Target Start/End: Original strand, 42720897 - 42720994
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtcgtatctgatatatgtgtctatatccgtgctt 452  Q
    ||||| |||||||||| | ||||||||| |||| ||||||||||| | |  |  ||||||||||||| | |||||| | ||||||  |||||||||||    
T  42720897 gacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtcatgtctgatgtctgtgtccgtatccgtgctt 42720994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 7328697 - 7328757
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgt 414  Q
    |||||| |||||||||||| ||||||||  |||| ||||||||||| ||| || |||||||    
T  7328697 cgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgt 7328757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 10042989 - 10042945
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||| || |||||||||  |||||||||||||||    
T  10042989 gacacttataattacgctaaattatgtgaatttatcaaattatta 10042945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 17851483 - 17851439
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||||| |||| | |||||||||    
T  17851483 gacacatataattacactgaattatgtgattttctaaaattatta 17851439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 19930947 - 19930991
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatt 398  Q
    |||||| |||||||||| ||||||||||  |||||||||||||||    
T  19930947 cgacacatataattacattgaattatgtcattttatcaaattatt 19930991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 22602716 - 22602756
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaat 394  Q
    |||||| |||||||||||||||||||||| |||| ||||||    
T  22602716 cgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 22868094 - 22868050
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||||| |||| ||| |||||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattatta 22868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 402
Target Start/End: Original strand, 23849464 - 23849512
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatca 402  Q
    |||||| |||||||| ||||||||||||| |||| | ||||||||||||    
T  23849464 cgacacatataattatactgaattatgtgtttttcttaaattattatca 23849512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 32308172 - 32308128
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| || ||||||||||||||||||| |||| |||||||||||    
T  32308172 gacacatacaattacactgaattatgtgattttctcaaattatta 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 35862016 - 35861972
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||||| ||||||||||| |||| |||||||||||    
T  35862016 gacacttacaattacattgaattatgtgattttttcaaattatta 35861972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 24343567 - 24343513
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||||| |||||||||||||||||||||  |||| |||||||||||||    
T  24343567 accgacacgacacctataattacactgaattatgtaattttctcaaattattatc 24343513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 14126113 - 14126162
Alignment:
Q  350 gacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  14126113 gacatgacacttataattacactgaattatgtgactttatcaaattatta 14126162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 54580029 - 54580074
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  54580029 cgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 420
Target Start/End: Complemental strand, 12077869 - 12077815
Alignment:
Q  366 ttacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgt 420  Q
    ||||| ||||||||||| |||| ||||||||||| ||| ||||||||||||||||    
T  12077869 ttacattgaattatgtgattttctcaaattattaacagtattgacgtgtcagtgt 12077815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 8423724 - 8423769
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||    
T  8423724 cgacatttataattacactgaattatgtgattttctcaaattatta 8423769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 8820468 - 8820395
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgt 420  Q
    ||||||||||||| ||| | | || ||||||||||| ||||||||||||||||||    |||||||||||||||    
T  8820468 accgacacgacacatatgactccattgaattatgtgattttatcaaattattatcgatgttgacgtgtcagtgt 8820395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 22440602 - 22440651
Alignment:
Q  350 gacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||| |||||||||||||||||||||| |||| |||||||||||    
T  22440602 gacacgtcacatataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 29205497 - 29205452
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  29205497 cgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 28964255 - 28964299
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||    
T  28964255 gacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 11596360 - 11596403
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||| |||| |||||||||||    
T  11596360 acacttgtaattacactgaattatgtgattttttcaaattatta 11596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 421
Target Start/End: Original strand, 20521850 - 20521922
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    |||||||||||||  || ||| || ||||||||||| |||||||||||||||||| | || | ||||||||||||    
T  20521850 accgacacgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtc 20521922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 421
Target Start/End: Complemental strand, 30838259 - 30838196
Alignment:
Q  358 acttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    ||||||||||||||| |||||| |  |||||||||||||||| ||| || ||||| ||||||||    
T  30838259 acttataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtc 30838196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Complemental strand, 36635375 - 36635332
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||| |||||||||||||||||||||| |||| |||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 903968 - 903930
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  903968 tataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 400
Target Start/End: Original strand, 12895280 - 12895326
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    ||||||||||||||||||  ||||||||| |||| ||||||||||||    
T  12895280 cgacacttataattacacaaaattatgtgattttttcaaattattat 12895326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 19230312 - 19230362
Alignment:
Q  351 acacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||| |||||||||| ||||||||||  |||| |||||||||||||    
T  19230312 acacgacacctataattacattgaattatgttattttctcaaattattatc 19230362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 401
Target Start/End: Original strand, 20743277 - 20743331
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||| |||| ||| |||||||||||||||||  |||| |||||||||||||    
T  20743277 accgacacaacacctatgattacactgaattatgtcattttctcaaattattatc 20743331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 5775364 - 5775409
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||| ||||||||| |||| |||||||||||    
T  5775364 cgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 6485617 - 6485662
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||    
T  6485617 cgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 12797344 - 12797388
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  12797344 cgacacttgtaattacactgaattatgtgatttt-tcaaattatta 12797388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 21945556 - 21945511
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||  |||| |||||||||||    
T  21945556 cgacacttgtaattacactgaattatgtcattttttcaaattatta 21945511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 23292992 - 23293037
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||| ||||||||||||| |||| |||||||||||    
T  23292992 cgacacttgtaattatactgaattatgtgattttttcaaattatta 23293037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 30982884 - 30982929
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||||| |||| |||||| ||||    
T  30982884 cgacacttataattacactgaaatatgtgattttctcaaatcatta 30982929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 31243547 - 31243600
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    ||||||| ||||| ||| |||||||||||||||||  |||| ||||||||||||    
T  31243547 accgacatgacacctatgattacactgaattatgtcattttctcaaattattat 31243600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 32910614 - 32910557
Alignment:
Q  344 gataccgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||  ||||  ||||||||||||||||||||  |||| |||||||||||||    
T  32910614 gataccgacataacacccataattacactgaattatgtcattttctcaaattattatc 32910557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 35157991 - 35158036
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||| ||||||||| ||||  ||||||||||    
T  35157991 cgacacttataattacactaaattatgtgatttttccaaattatta 35158036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 40613503 - 40613458
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||| ||||| |||||    
T  40613503 cgacacatataattacactgaattatgtgattttctcaaaatatta 40613458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 3947773 - 3947817
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||| | |||| |||||||||||    
T  3947773 gacacttgtaattacactgaattatgcgattttttcaaattatta 3947817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 421
Target Start/End: Complemental strand, 20633542 - 20633471
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    ||||||||||||||| |||||||| ||||||||   ||||| ||||||||||| | |  | ||||||||||||||    
T  20633542 accgacacgacacttgtaattacattgaattat---gttttttcaaattattagcggtgtcgacgtgtcagtgtc 20633471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 398
Target Start/End: Original strand, 21873385 - 21873421
Alignment:
Q  362 ataattacactgaattatgtggttttatcaaattatt 398  Q
    |||||| |||||||||||||| |||||||||||||||    
T  21873385 ataatttcactgaattatgtgattttatcaaattatt 21873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 398
Target Start/End: Original strand, 21929246 - 21929282
Alignment:
Q  362 ataattacactgaattatgtggttttatcaaattatt 398  Q
    |||||| |||||||||||||| |||||||||||||||    
T  21929246 ataatttcactgaattatgtgattttatcaaattatt 21929282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 40481696 - 40481645
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||  |||||| |||||||||||||||||||| |||| |||||||||||    
T  40481696 accgacataacacttgtaattacactgaattatgtgatttt-tcaaattatta 40481645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 53233 - 53189
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatt 398  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  53233 cgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 28412395 - 28412336
Alignment:
Q  362 ataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    ||||||||||||||||||||| |||||||||||||||| | |  ||||||||| ||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtc 28412336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 10535762 - 10535812
Alignment:
Q  351 acacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||||||| |||||||||||||||||  |||| |||||||||||||    
T  10535762 acacgacacttatgattacactgaattatgtcattttctcaaattattatc 10535812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 12668429 - 12668474
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||    
T  12668429 cgacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 30404856 - 30404901
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  30404856 cgacacttgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 30717536 - 30717581
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||    
T  30717536 cgacacttgtaattacactgaattatgtgattttttcaaattatta 30717581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 34691811 - 34691856
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||    
T  34691811 cgacacatataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 34714223 - 34714268
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||    
T  34714223 cgacacatataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 18420440 - 18420504
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagt 418  Q
    |||||||||||||| || ||||||||||| |||| ||||||||||| |||  ||| |||||||||    
T  18420440 cgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagt 18420504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Complemental strand, 18622657 - 18622614
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||| |||||||||||||||||||||| |||||| |||||||||    
T  18622657 acacgtataattacactgaattatgtgattttattaaattatta 18622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Complemental strand, 21616813 - 21616770
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||| |||||||||||||||||||||| |||| |||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattatta 21616770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 397
Target Start/End: Original strand, 11308003 - 11308053
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattat 397  Q
    ||||||||||||| ||| |||||||||||||||||  |||| |||||||||    
T  11308003 accgacacgacacctatgattacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 19574038 - 19573984
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    ||||||||| ||| |||||||||||||||||||||  |||| | |||||||||||    
T  19574038 accgacacgccacctataattacactgaattatgttattttcttaaattattatc 19573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 420
Target Start/End: Original strand, 21782832 - 21782890
Alignment:
Q  362 ataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgt 420  Q
    ||||||||||||||||||||| |||| ||||||||||| |||  | | |||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 28677955 - 28677917
Alignment:
Q  361 tataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  28677955 tataattacactgaattatgtgattttttcaaattatta 28677917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 2438725 - 2438770
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| | |||||||||    
T  2438725 cgacacttgtaattacactgaattatgtgattttttgaaattatta 2438770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 5367245 - 5367200
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||||| |||  |||||||||||    
T  5367245 cgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 17776639 - 17776594
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    ||||| |||||||||||||| |||||||||||| | ||||||||||    
T  17776639 gacacatataattacactgacttatgtggttttcttaaattattat 17776594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 23718079 - 23718034
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||||||||||||||||||||||  ||| |||||||||||    
T  23718079 cgacacatataattacactgaattatgtgactttctcaaattatta 23718034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 24105751 - 24105706
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||||||||||||||||||||||  ||| |||||||||||    
T  24105751 cgacacatataattacactgaattatgtgactttctcaaattatta 24105706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 25544541 - 25544488
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattat 400  Q
    ||||||||||||| ||| ||||||||||||||| |  |||| ||||||||||||    
T  25544541 accgacacgacacctatgattacactgaattatatcattttctcaaattattat 25544488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 420
Target Start/End: Complemental strand, 35449565 - 35449500
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgt 420  Q
    ||||| ||||||||||||||||| |||| |||| ||||||||||| |||  ||| | |||||||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgt 35449500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 36756350 - 36756395
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||||||||||  |||  |||||||||||    
T  36756350 cgacacttataattacactgaattatgttatttcttcaaattatta 36756395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 37411250 - 37411295
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||| ||||||||||||||| |||| |||||||||||    
T  37411250 cgacacatataatcacactgaattatgtgattttctcaaattatta 37411295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 42832282 - 42832327
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||||||||||||| |||||  |||| |||||||||||    
T  42832282 cgacacttataattacactgaaatatgtaattttctcaaattatta 42832327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 44860373 - 44860328
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||| | |||| |||||||||||    
T  44860373 cgacacatataattacactgaattatgcgattttctcaaattatta 44860328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 21374706 - 21374750
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||  |||| |||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattatta 21374750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 27286299 - 27286343
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||| ||||||||| | ||||||||||||||    
T  27286299 gacacctataattacacttaattatgtgatcttatcaaattatta 27286343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 31808129 - 31808085
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||||| |||| | |||||||||    
T  31808129 gacacatataattacactgaattatgtgattttgttaaattatta 31808085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 39323316 - 39323272
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||  |||| |||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattatta 39323272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 70331 - 70286
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||    
T  70331 cgacacttataattacactgaattatgttattttttcaaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 20224 - 20180
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||    
T  20224 gacacttgtaattacactgaattatgtgattttttcaaattatta 20180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Complemental strand, 51862 - 51819
Alignment:
Q  356 acacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||||| |||| |||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattatta 51819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 421
Target Start/End: Original strand, 8052 - 8126
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattattatcagcattgacgtgtcagtgtc 421  Q
    |||||||||| || |||  ||||||||||||||||  |||| ||||||||||||| | || |||||||| |||||    
T  8052 accgacacgatacctatgtttacactgaattatgtcattttctcaaattattatccgtatcgacgtgtcggtgtc 8126  T

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Target: scaffold0361 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 399
Target Start/End: Complemental strand, 14580 - 14538
Alignment:
Q  357 cacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| |||||||||||||||||||| |||| |||||||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattatta 14538  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 225271 - 225321
Alignment:
Q  351 acacgacacttataattacactgaattatgtggttttatcaaattattatc 401  Q
    |||||||||||||||||||| || |||||||  |||| |||||||||||||    
T  225271 acacgacacttataattacattgtattatgtcattttctcaaattattatc 225321  T

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Target: scaffold0652 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 468 - 513
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| ||||||||||||||| |||| |||| |||||||||||    
T  468 cgacacttgtaattacactgaattttgtgattttttcaaattatta 513  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 25774 - 25819
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||||||||||||||| ||||||||| |||| || ||||||||    
T  25774 cgacacttataattacactaaattatgtgattttctctaattatta 25819  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 387
Target Start/End: Complemental strand, 23473 - 23440
Alignment:
Q  354 cgacacttataattacactgaattatgtggtttt 387  Q
    ||||||||||||||||||||||||||||| ||||    
T  23473 cgacacttataattacactgaattatgtgatttt 23440  T

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Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 387
Target Start/End: Complemental strand, 23563 - 23531
Alignment:
Q  355 gacacttataattacactgaattatgtggtttt 387  Q
    |||||||||||||||||||||||||||| ||||    
T  23563 gacacttataattacactgaattatgtgatttt 23531  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 395
Target Start/End: Original strand, 44531 - 44572
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaatt 395  Q
    |||||| |||||||||||||||||||||| |||| |||||||    
T  44531 cgacacatataattacactgaattatgtgattttctcaaatt 44572  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 9753 - 9798
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| |||||||||||||||||| ||| |||| |||||||||||    
T  9753 cgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 46735 - 46690
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||| || |||||||||||||||||||| |||| |||||||||||    
T  46735 cgacatttgtaattacactgaattatgtgattttttcaaattatta 46690  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 130535 - 130490
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||||||||||||| |||| ||||| |||||    
T  130535 cgacacttgtaattacactgaattatgtgattttttcaaactatta 130490  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 135318 - 135363
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||| ||||||||||| |||||||||| |||| |||||||||||    
T  135318 cgacacatataattacacagaattatgtgattttctcaaattatta 135363  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 17755 - 17800
Alignment:
Q  354 cgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||| |||||||||| ||||||||| |||| |||||||||||    
T  17755 cgacacttgtaattacactaaattatgtgattttttcaaattatta 17800  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 19635 - 19584
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||  |||||| |||||||||||||||||||| |||| |||||||||||    
T  19635 accgacataacacttgtaattacactgaattatgtgatttt-tcaaattatta 19584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 3856 - 3900
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||| |||| | |||||||||    
T  3856 gacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 33363 - 33414
Alignment:
Q  347 accgacacgacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    |||||||||||| || |||||||||||||||||||  |||| |||||||||||    
T  33363 accgacacgaca-ttgtaattacactgaattatgttattttttcaaattatta 33414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 92859 - 92815
Alignment:
Q  355 gacacttataattacactgaattatgtggttttatcaaattatta 399  Q
    ||||||| |||||||||||||||||||  |||| |||||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattatta 92815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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