View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0744_low_9 (Length: 347)
Name: NF0744_low_9
Description: NF0744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0744_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 73 - 295
Target Start/End: Original strand, 8840037 - 8840256
Alignment:
| Q |
73 |
ctcaaatcccatgtattcattcctctgaatcctctgaatcatacgtgatattcctactccacctatagacaaccatacaagtcatgaaagccatgttgta |
172 |
Q |
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| T |
8840037 |
ctcaaatcccatgtattcattattctgaatcctctgaatcatgcgtgatattcctactccacctatagacaaccatacaagt---gaaagccatgttgta |
8840133 |
T |
|
| Q |
173 |
agcaagtagatttcatagagaaatatgcatagggaaatgaaagcttaaaatgtaaaaattaattagcaatcgtcatatttttctctgcaatgcgattatt |
272 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
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| T |
8840134 |
agcaagtagatttcatagagaaatatgcatagtgaaatgaaagcttaaaatgtaaaaactaattagcaatcgtcatatttttctccgcaatgcgattatt |
8840233 |
T |
|
| Q |
273 |
atgacgtttttagaggtctctgc |
295 |
Q |
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||||||||||||||||||||||| |
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| T |
8840234 |
atgacgtttttagaggtctctgc |
8840256 |
T |
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