View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0745_low_31 (Length: 272)
Name: NF0745_low_31
Description: NF0745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0745_low_31 |
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Alignment Details
Target: chr1 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 49 - 231
Target Start/End: Original strand, 44843344 - 44843526
Alignment:
| Q |
49 |
agagagagtgtggttaatggttatagggttagacttagagataaagcatttatattgaactcaaagcgctaaaatctctcgaagactataccgaattctt |
148 |
Q |
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| T |
44843344 |
agagagagtgtggttaatggttatagggttagacttagagataaagcatttatattgaactcaaagcgctaaaatctctcgaagactataccgaattctt |
44843443 |
T |
|
| Q |
149 |
aaagatagagctgcatattgttattcccaactaaattgccaacgagacacataactctcaatagtcgatactcatgtgagaat |
231 |
Q |
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| T |
44843444 |
aaagatagagctgcatattgttactcccaactaaattgccaacgacacacataactctcaatagtcaatactcatgtgagaat |
44843526 |
T |
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