View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0747_low_13 (Length: 334)

Name: NF0747_low_13
Description: NF0747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0747_low_13
NF0747_low_13
[»] chr8 (31 HSPs)
chr8 (189-321)||(9700029-9700161)
chr8 (198-321)||(7714270-7714393)
chr8 (198-321)||(26479813-26479936)
chr8 (198-321)||(8060697-8060819)
chr8 (203-321)||(6950350-6950468)
chr8 (214-319)||(13000359-13000464)
chr8 (241-321)||(30918141-30918220)
chr8 (238-321)||(778417-778500)
chr8 (218-313)||(11569396-11569491)
chr8 (263-317)||(11770995-11771049)
chr8 (210-316)||(30191072-30191178)
chr8 (263-315)||(32840969-32841022)
chr8 (198-310)||(2091802-2091914)
chr8 (211-279)||(7918713-7918781)
chr8 (241-321)||(8629484-8629564)
chr8 (241-321)||(27754432-27754512)
chr8 (241-321)||(37822621-37822700)
chr8 (258-321)||(11183573-11183636)
chr8 (198-297)||(16162812-16162911)
chr8 (200-271)||(20186385-20186456)
chr8 (200-271)||(20205452-20205523)
chr8 (264-319)||(37444405-37444460)
chr8 (210-317)||(43504783-43504890)
chr8 (231-321)||(31875547-31875637)
chr8 (268-317)||(2594986-2595035)
chr8 (289-318)||(3600748-3600777)
chr8 (289-318)||(14339615-14339644)
chr8 (248-317)||(30259146-30259215)
chr8 (267-311)||(779049-779093)
chr8 (245-321)||(7918412-7918488)
chr8 (291-319)||(12132865-12132893)
[»] chr2 (32 HSPs)
chr2 (218-321)||(37034050-37034153)
chr2 (198-321)||(42817295-42817418)
chr2 (217-319)||(41809183-41809285)
chr2 (198-317)||(8017466-8017585)
chr2 (258-321)||(35378995-35379058)
chr2 (263-321)||(40158746-40158804)
chr2 (237-318)||(43199742-43199823)
chr2 (200-321)||(43985237-43985358)
chr2 (200-323)||(9174841-9174964)
chr2 (266-321)||(1056116-1056171)
chr2 (238-321)||(12313132-12313215)
chr2 (198-281)||(13866946-13867029)
chr2 (198-321)||(15120211-15120334)
chr2 (198-321)||(43529777-43529900)
chr2 (259-313)||(680539-680593)
chr2 (227-321)||(7283024-7283118)
chr2 (264-318)||(14666579-14666633)
chr2 (198-279)||(36677722-36677804)
chr2 (263-321)||(41817196-41817254)
chr2 (263-317)||(44606094-44606148)
chr2 (284-321)||(9395158-9395195)
chr2 (258-319)||(9556269-9556330)
chr2 (218-319)||(13234536-13234637)
chr2 (198-247)||(28810371-28810420)
chr2 (284-317)||(40682400-40682433)
chr2 (276-321)||(44443349-44443394)
chr2 (263-316)||(45314901-45314954)
chr2 (258-321)||(11488305-11488366)
chr2 (289-321)||(16867767-16867799)
chr2 (241-281)||(27699491-27699531)
chr2 (269-321)||(34652026-34652078)
chr2 (263-319)||(35378516-35378572)
[»] chr1 (27 HSPs)
chr1 (198-319)||(4868430-4868550)
chr1 (201-321)||(10199330-10199450)
chr1 (209-321)||(38170620-38170732)
chr1 (198-317)||(7217993-7218112)
chr1 (210-321)||(31517671-31517782)
chr1 (200-281)||(4757406-4757487)
chr1 (209-321)||(37593614-37593726)
chr1 (198-321)||(6292521-6292643)
chr1 (198-253)||(52013983-52014038)
chr1 (263-321)||(3924652-3924710)
chr1 (263-313)||(29635383-29635433)
chr1 (204-321)||(27140506-27140623)
chr1 (259-319)||(50998568-50998629)
chr1 (237-321)||(6262048-6262132)
chr1 (199-319)||(6659710-6659830)
chr1 (269-320)||(3223697-3223747)
chr1 (239-321)||(25479609-25479691)
chr1 (263-321)||(35925718-35925776)
chr1 (271-321)||(46252674-46252724)
chr1 (258-319)||(6031453-6031514)
chr1 (285-322)||(10169442-10169479)
chr1 (284-321)||(15361068-15361105)
chr1 (275-316)||(28910023-28910064)
chr1 (229-281)||(4033967-4034019)
chr1 (273-321)||(5276321-5276369)
chr1 (289-317)||(26779935-26779963)
chr1 (289-321)||(33108632-33108664)
[»] chr6 (37 HSPs)
chr6 (198-321)||(2460070-2460193)
chr6 (198-321)||(30863274-30863397)
chr6 (238-295)||(3181028-3181085)
chr6 (238-323)||(7931685-7931770)
chr6 (237-317)||(33498651-33498731)
chr6 (263-315)||(33832257-33832309)
chr6 (243-313)||(2455295-2455366)
chr6 (248-310)||(4080955-4081017)
chr6 (198-320)||(33089535-33089657)
chr6 (263-316)||(1575928-1575981)
chr6 (209-302)||(1669728-1669821)
chr6 (252-321)||(9027606-9027675)
chr6 (263-316)||(31624123-31624176)
chr6 (239-319)||(8035108-8035188)
chr6 (241-317)||(20368142-20368218)
chr6 (222-317)||(769170-769265)
chr6 (288-319)||(2023395-2023426)
chr6 (198-321)||(7148694-7148817)
chr6 (262-321)||(7945867-7945926)
chr6 (252-315)||(30604930-30604993)
chr6 (210-321)||(33080509-33080620)
chr6 (198-321)||(34403883-34404006)
chr6 (239-321)||(281808-281890)
chr6 (275-321)||(6647415-6647461)
chr6 (211-281)||(27857426-27857496)
chr6 (199-280)||(738461-738542)
chr6 (268-321)||(3528831-3528884)
chr6 (258-319)||(31420975-31421036)
chr6 (231-276)||(31668430-31668475)
chr6 (273-321)||(6536975-6537023)
chr6 (269-321)||(7785734-7785786)
chr6 (269-321)||(9667975-9668027)
chr6 (258-310)||(20377899-20377951)
chr6 (239-303)||(27693399-27693463)
chr6 (258-322)||(28641728-28641792)
chr6 (238-318)||(33887861-33887941)
chr6 (289-321)||(35070477-35070509)
[»] chr4 (29 HSPs)
chr4 (198-321)||(27123271-27123394)
chr4 (198-321)||(6428046-6428169)
chr4 (209-321)||(33534099-33534211)
chr4 (238-321)||(2996601-2996684)
chr4 (198-311)||(7367973-7368086)
chr4 (212-284)||(18628486-18628558)
chr4 (263-321)||(28300283-28300341)
chr4 (211-317)||(44319981-44320087)
chr4 (239-321)||(46019589-46019671)
chr4 (231-321)||(46247233-46247323)
chr4 (289-322)||(25548138-25548171)
chr4 (238-302)||(4071925-4071989)
chr4 (209-316)||(3176034-3176141)
chr4 (238-317)||(4691880-4691959)
chr4 (238-321)||(28232573-28232656)
chr4 (263-321)||(1137740-1137798)
chr4 (284-314)||(20907382-20907412)
chr4 (263-321)||(20936213-20936271)
chr4 (197-247)||(24193634-24193684)
chr4 (239-321)||(25497584-25497666)
chr4 (231-321)||(46013265-46013355)
chr4 (283-321)||(52259659-52259697)
chr4 (198-321)||(679746-679865)
chr4 (238-319)||(42461281-42461362)
chr4 (284-321)||(47145990-47146027)
chr4 (238-321)||(47800651-47800731)
chr4 (269-321)||(2592299-2592351)
chr4 (241-321)||(23819117-23819197)
chr4 (198-310)||(39178185-39178297)
[»] chr5 (31 HSPs)
chr5 (198-318)||(11297115-11297235)
chr5 (245-321)||(8089964-8090040)
chr5 (237-321)||(6593327-6593411)
chr5 (210-310)||(10391381-10391481)
chr5 (198-322)||(12459920-12460044)
chr5 (210-321)||(10125649-10125760)
chr5 (258-321)||(13604828-13604891)
chr5 (211-309)||(4273309-4273407)
chr5 (239-321)||(37611175-37611257)
chr5 (239-321)||(37787905-37787987)
chr5 (270-319)||(12467163-12467212)
chr5 (209-281)||(11457166-11457238)
chr5 (289-321)||(31694546-31694578)
chr5 (198-320)||(8651271-8651394)
chr5 (238-321)||(10272390-10272473)
chr5 (211-321)||(6109511-6109621)
chr5 (263-313)||(7674684-7674734)
chr5 (232-321)||(7907909-7907999)
chr5 (263-321)||(36578503-36578561)
chr5 (198-255)||(3734608-3734665)
chr5 (292-321)||(10296439-10296468)
chr5 (204-281)||(11296924-11297001)
chr5 (284-321)||(11707083-11707120)
chr5 (264-321)||(17258868-17258925)
chr5 (241-316)||(7985002-7985078)
chr5 (228-280)||(10907447-10907499)
chr5 (289-317)||(12425603-12425631)
chr5 (269-321)||(31688067-31688119)
chr5 (289-321)||(33533549-33533581)
chr5 (289-321)||(35531167-35531199)
chr5 (198-250)||(36796626-36796678)
[»] chr7 (27 HSPs)
chr7 (209-321)||(25670516-25670628)
chr7 (232-321)||(22387849-22387938)
chr7 (210-293)||(8094362-8094445)
chr7 (198-281)||(23214923-23215006)
chr7 (258-321)||(46082064-46082127)
chr7 (263-316)||(15740395-15740448)
chr7 (263-312)||(30316999-30317048)
chr7 (198-310)||(33894666-33894778)
chr7 (241-312)||(34035954-34036026)
chr7 (209-321)||(34754740-34754852)
chr7 (210-318)||(44808189-44808297)
chr7 (198-321)||(1422917-1423040)
chr7 (263-317)||(19022568-19022623)
chr7 (290-321)||(25596061-25596092)
chr7 (230-313)||(36537944-36538027)
chr7 (200-271)||(44289964-44290035)
chr7 (201-255)||(529456-529510)
chr7 (200-310)||(28727684-28727794)
chr7 (267-317)||(44821991-44822041)
chr7 (252-321)||(7244708-7244777)
chr7 (200-321)||(12234810-12234931)
chr7 (241-317)||(20526890-20526967)
chr7 (292-321)||(22204496-22204525)
chr7 (292-321)||(22230214-22230243)
chr7 (243-320)||(39360052-39360129)
chr7 (284-321)||(47395103-47395140)
chr7 (203-279)||(13960648-13960723)
[»] chr3 (30 HSPs)
chr3 (198-310)||(36646301-36646413)
chr3 (238-321)||(24281075-24281158)
chr3 (238-306)||(2175808-2175876)
chr3 (269-321)||(3044249-3044301)
chr3 (241-317)||(39602172-39602248)
chr3 (238-321)||(14548680-14548763)
chr3 (238-317)||(37273166-37273245)
chr3 (210-321)||(43115084-43115195)
chr3 (200-299)||(50015936-50016035)
chr3 (263-317)||(5391911-5391965)
chr3 (211-321)||(27792900-27793010)
chr3 (263-321)||(47513681-47513739)
chr3 (198-255)||(51929835-51929892)
chr3 (257-321)||(3015821-3015885)
chr3 (273-321)||(25925770-25925818)
chr3 (198-321)||(41633388-41633509)
chr3 (263-319)||(42745068-42745124)
chr3 (238-321)||(2152137-2152220)
chr3 (76-111)||(11093708-11093743)
chr3 (198-297)||(44014717-44014816)
chr3 (198-317)||(45541603-45541722)
chr3 (239-281)||(25182947-25182989)
chr3 (200-321)||(20194954-20195074)
chr3 (244-321)||(21574518-21574595)
chr3 (198-275)||(32663712-32663789)
chr3 (198-279)||(50211805-50211886)
chr3 (238-310)||(1810016-1810088)
chr3 (269-321)||(26542565-26542617)
chr3 (240-308)||(34707457-34707525)
chr3 (288-316)||(41671343-41671371)
[»] scaffold0459 (1 HSPs)
scaffold0459 (198-281)||(6614-6697)
[»] scaffold0366 (1 HSPs)
scaffold0366 (198-281)||(6612-6695)
[»] scaffold0311 (1 HSPs)
scaffold0311 (239-316)||(10577-10654)


Alignment Details
Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 9700161 - 9700029
Alignment:
Q  189 gtaaggccgtgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgttt 288  Q
    |||||| | |||||||||| |||||||| |||||||||  | ||||| |||||||||||||||||||| |||| || ||||| ||| ||||||  |||      
T  9700161 gtaagggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtcc 9700062  T
Q  289 ataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||||||| ||||||||||||||||||    
T  9700061 ataagctgttttcaccttattttcataagctct 9700029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 7714393 - 7714270
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| ||||||| |  || |||| |||||||||||||| ||||  | || || || |||||||||||||| |||  || || |||    
T  7714393 tgtttggattgacttatttgagcttatataatgtcataaacacttgtgagactgtttggaaaagcttgtggaaacaacttatgaaatgtcgatgagctgt 7714294  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||||||||||||||| ||||||    
T  7714293 tttcaacttattttcatgagctct 7714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 26479936 - 26479813
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||||||||||||| ||| || |   |||||||| ||||||||  |||| ||||| ||||||||||||   ||| |||||||| |    
T  26479936 tgtttggattgacttatttaagcttatctattgacacaaggacttgtgaaactatttgcgagagcttatggaaacaacttatgtcatgtctataagtttt 26479837  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||| | ||||| ||||||||||    
T  26479836 tttcagcgtatttccataagctct 26479813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 8060819 - 8060697
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| ||| ||||| ||| |||| ||||||  || ||| ||||| |||| |||||||||||| ||||| |  ||| ||||||| |    
T  8060819 tgtttggattgacttatttgagcatatctattgacataaacacttc-gaaactgtttgagagagcttatgaaaacaaattatggaaagttcataagttat 8060721  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||| ||||||| ||||||||||    
T  8060720 tttcagcttatttccataagctct 8060697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 6950468 - 6950350
Alignment:
Q  203 ggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttca 302  Q
    ||||| |||||||| || ||||||  ||||||| ||| |||||||| | ||||  |||| ||||| ||||||| |||||  |||  ||||||||||||||    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttca 6950369  T
Q  303 acttattttcataagctct 321  Q
     ||||||| ||||||||||    
T  6950368 gcttatttccataagctct 6950350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 13000359 - 13000464
Alignment:
Q  214 tttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttca 313  Q
    |||||||||| ||  |||||||  ||||||||||||||||||  |||| |||||  ||||||||||||  |||  | |||||||||||| ||||||| ||    
T  13000359 tttaagcttacctactggcataagcacttgtgagactatttgcaagagtttatggtaacaacttatgacatgtccacaagttgttttcagcttatttcca 13000458  T
Q  314 taagct 319  Q
    ||||||    
T  13000459 taagct 13000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 30918220 - 30918141
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||| ||||| |||| ||||||||||||||| |||  | || |||||||||||||| ||||||| ||||||||||    
T  30918220 ttgtgagactgtttgagagagcttatgaaaacaacttgtgacat-ttcataagttgttttcagcttatttccataagctct 30918141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 778500 - 778417
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||||| ||||  |||  ||||||||||||| || ||   |||| |||||||||||||||||| |||||||||||||    
T  778500 cacttgtgagactgtttgcaagaacttatgaaaacaacataagacacgtttgtaagttgttttcaacttactttcataagctct 778417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 11569396 - 11569491
Alignment:
Q  218 agcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttca 313  Q
    |||||||||  |||||||  ||||||||||||| ||| | |||| ||||| ||||| |||||||  |||  |||||||||||||| ||||||||||    
T  11569396 agcttatctgctggcataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttca 11569491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 11770995 - 11771049
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    |||||||||||||||||||  ||| |||| ||||||||||||||||||| |||||    
T  11770995 ttatgaaaacaacttatgatatgtctatacgttgttttcaacttatttttataag 11771049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 30191072 - 30191178
Alignment:
Q  210 cttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttatt 309  Q
    ||||||| || |||||| ||||||||  ||||||| ||||| ||||  |||| ||||| |||||||||||||  |||| | || ||||||||| ||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatt 30191171  T
Q  310 ttcataa 316  Q
    | |||||    
T  30191172 tccataa 30191178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 32840969 - 32841022
Alignment:
Q  263 ttatgaaaacaacttatga-agtgtttataagttgttttcaacttattttcata 315  Q
    ||||||||||||||||||| | |||| |||||||||||||| ||||||||||||    
T  32840969 ttatgaaaacaacttatgacattgttcataagttgttttcagcttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 2091914 - 2091802
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| | |||||| | ||||||   ||||||| |||||||||||| | ||||| |||| | |  ||||||||||||||  | |  |||||||||    
T  2091914 tgtttggattgatttatttgatcttatccaatggcataaacacttgtgagattgtttgagagagctcacaaaaacaacttatgatatatccataagttgt 2091815  T
Q  298 tttcaacttattt 310  Q
    |||||||||||||    
T  2091814 tttcaacttattt 2091802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 7918713 - 7918781
Alignment:
Q  211 ttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttat 279  Q
    |||||||| |||||||  | ||||| |||||||||||||| ||||  |||| |||||||||||||||||    
T  7918713 ttatttaaacttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 8629564 - 8629484
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||  ||||| |||  |||||||||||||||||||  || | |||||||||||||||||| | || |||||||||    
T  8629564 ttgtgagaccgtttgagagaacttatgaaaacaacttatgacatgatcataagttgttttcaacttctatttataagctct 8629484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 27754512 - 27754432
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||||  |||  |||||||||||  ||||||  || ||||||||||  |||| ||||||||||||||||||    
T  27754512 ttgtgagactatttgggagaacttatgaaaacagtttatgacatgattataagttgcgttcagcttattttcataagctct 27754432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 37822621 - 37822700
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||| ||||| | |  |||| ||||||| ||||||  ||||| |||||||||||| |||||||||||||||||||    
T  37822621 ttgtgagactgtttgagaaaatttattaaaacaatttatgatatgtttgtaagttgttttc-acttattttcataagctct 37822700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 11183636 - 11183573
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| |||| ||||||||||||||  ||| |||||| |||||||| ||||||| ||||||||||    
T  11183636 agagcttataaaaacaacttatgatatgtctataagctgttttcagcttatttccataagctct 11183573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 16162911 - 16162812
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    ||||||||||  ||||||| || ||||||  | ||||| |||||||||||||| ||||| | |  ||||||||||| |||||||  |||| |||||||||    
T  16162911 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcataagttgt 16162812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 20186385 - 20186456
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaa 271  Q
    |||| ||| |||||||| |||||||||  ||||||||||||| |||||||||||  | |||| |||||||||    
T  20186385 tttgcattgacttatttgagcttatctagtggcatagacactggtgagactattcaagagagtttatgaaaa 20186456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 20205452 - 20205523
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaa 271  Q
    |||| ||| |||||||| |||||||||  ||||||||||||| |||||||||||  | |||| |||||||||    
T  20205452 tttgcattgacttatttgagcttatctagtggcatagacactggtgagactattcaagagagtttatgaaaa 20205523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 37444405 - 37444460
Alignment:
Q  264 tatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagct 319  Q
    |||||||||||||| | |  |||||||||||| |||||| ||||||||||||||||    
T  37444405 tatgaaaacaacttttaacatgtttataagttattttcagcttattttcataagct 37444460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 317
Target Start/End: Complemental strand, 43504890 - 43504783
Alignment:
Q  210 cttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttatt 309  Q
    |||||||||||||||||  |||| ||  |||||||| |||| |||   |||  | |||||||||||||| ||  |||||||||| |||||||| ||||||    
T  43504890 cttatttaagcttatctactggcttaagcacttgtgtgactgtttcggagaactgatgaaaacaacttacgacttgtttataagctgttttcagcttatt 43504791  T
Q  310 ttcataag 317  Q
    | ||||||    
T  43504790 tccataag 43504783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 321
Target Start/End: Original strand, 31875547 - 31875637
Alignment:
Q  231 gcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||| ||||| |||| ||| ||||| | || ||||| |||||||||||||  |||  |||||   |||||||||||||||||||||||||    
T  31875547 gcataaacactagtgacactgtttgagaaagcttatggaaacaacttatgacatgtccataagccattttcaacttattttcataagctct 31875637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 2594986 - 2595035
Alignment:
Q  268 aaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    ||||||||||||||  |||| |||||||||||||| |||||| |||||||    
T  2594986 aaaacaacttatgacatgttcataagttgttttcagcttattctcataag 2595035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 318
Target Start/End: Original strand, 3600748 - 3600777
Alignment:
Q  289 ataagttgttttcaacttattttcataagc 318  Q
    ||||||||||||||||||||||||||||||    
T  3600748 ataagttgttttcaacttattttcataagc 3600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 318
Target Start/End: Original strand, 14339615 - 14339644
Alignment:
Q  289 ataagttgttttcaacttattttcataagc 318  Q
    ||||||||||||||||||||||||||||||    
T  14339615 ataagttgttttcaacttattttcataagc 14339644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 30259215 - 30259146
Alignment:
Q  248 actatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    ||||||||| |||| ||||| ||||| |||||||  ||| |||||||||||||||  |||||| ||||||    
T  30259215 actatttgagagagcttatggaaacagcttatgatatgtctataagttgttttcagtttatttccataag 30259146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 779049 - 779093
Alignment:
Q  267 gaaaacaacttatgaagtgtttataagttgttttcaacttatttt 311  Q
    |||||||||||||||  |||| |||||||||||||| ||||||||    
T  779049 gaaaacaacttatgacatgttcataagttgttttcatcttatttt 779093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 7918412 - 7918488
Alignment:
Q  245 gagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||| ||||  |||| |||||||||||||||| ||  |||| ||||| ||||| ||||||||||  |||||||||    
T  7918412 gagactgtttgggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctct 7918488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 319
Target Start/End: Complemental strand, 12132893 - 12132865
Alignment:
Q  291 aagttgttttcaacttattttcataagct 319  Q
    |||||||||||||||||||||||||||||    
T  12132893 aagttgttttcaacttattttcataagct 12132865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 37034153 - 37034050
Alignment:
Q  218 agcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    |||||||||  ||||||| | ||||||||||||||||| ||||||||||| ||||| |||| ||  ||||||||| |||||||||||||||||  |||||    
T  37034153 agcttatctactggcatacatacttgtgagactatttgttagagattatggaaacagcttaagacatgtttataaattgttttcaacttatttctataag 37034054  T
Q  318 ctct 321  Q
    ||||    
T  37034053 ctct 37034050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 321
Target Start/End: Original strand, 42817295 - 42817418
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||||| ||||| | |||| ||  | ||||||||||||||||  ||||| |||||||||||||||| |   ||||  ||||||||    
T  42817295 tgtttggattgacttatttaatcttatttattggtattaatacttgtgagactatttagtagagtttatgaaaacaacttacggcatgttcttaagttgt 42817394  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||| | |||| || ||||||||||    
T  42817395 ttttagcttacttccataagctct 42817418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 319
Target Start/End: Original strand, 41809183 - 41809285
Alignment:
Q  217 aagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataa 316  Q
    |||||||| | |||||||| ||||||||||||||  |||  |||| || || |||||||||||||  |||| |||||||||||| | ||||||| |||||    
T  41809183 aagcttatttgttggcataaacacttgtgagactgattgtaagagcttgtggaaacaacttatgacatgttcataagttgtttttagcttatttccataa 41809282  T
Q  317 gct 319  Q
    |||    
T  41809283 gct 41809285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 8017585 - 8017466
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| || |||||| ||| ||||  |||||||| || ||||||  |||  ||||||||||| |||||||  |||| |||| ||||    
T  8017585 tgtttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagcttatgatatgttcataatttgt 8017486  T
Q  298 tttcaacttattttcataag 317  Q
    ||||  | ||||||||||||    
T  8017485 tttctgcgtattttcataag 8017466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 35378995 - 35379058
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| ||||||||||| || ||||  |||| |||||||||||||| ||||||||||||||||||    
T  35378995 agagcttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctct 35379058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 40158804 - 40158746
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||| |||||||  ||||||||||||||||||| |||| || ||||||||||    
T  40158804 ttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctct 40158746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 43199742 - 43199823
Alignment:
Q  237 acacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagc 318  Q
    |||||||||||||| ||||  |||  ||| ||| ||||||| |||  ||||||||||||||||||| |||| ||||||||||    
T  43199742 acacttgtgagactgtttgggagaagttacgaatacaacttgtgacatgtttataagttgttttcagcttaatttcataagc 43199823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 43985358 - 43985237
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttt 299  Q
    |||||||  ||||||||||| ||||||  || |||| |||||||| | ||| ||||| ||||||||   |||||||||||||  |||  ||||| | |||    
T  43985358 tttggatcgacttatttaagtttatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagcttttt 43985259  T
Q  300 tcaacttattttcataagctct 321  Q
    ||||||| ||| ||||||||||    
T  43985258 tcaacttgtttccataagctct 43985237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 323
Target Start/End: Complemental strand, 9174964 - 9174841
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga-agtgtttataagttgtt 298  Q
    |||||||| |||||||| ||||||||| |||||||| |    ||||||||| |||||  | | || | |||||||||||||| | |||| ||||| | ||    
T  9174964 tttggatttacttatttgagcttatctattggcata-agttatgtgagactgtttgagggggcttgttaaaacaacttatgacattgttcataagctatt 9174866  T
Q  299 ttcaacttattttcataagctctgt 323  Q
    |||| ||||||||||||||||||||    
T  9174865 ttcagcttattttcataagctctgt 9174841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 1056116 - 1056171
Alignment:
Q  266 tgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||||||||  |||| || ||||||||||| ||| ||||||||||||||    
T  1056116 tgaaaacaacttatgacatgttcattagttgttttcagcttgttttcataagctct 1056171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 12313132 - 12313215
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||| | ||||  |||  ||||||||||| ||||||   |||| |||||||| ||||| ||||||||||||||||||    
T  12313132 cacttgtgagattgtttgggagaatttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataagctct 12313215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 13867029 - 13866946
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    |||||||||| || ||||| |||||||||  || |||| |||||||||||||| ||||| |||  ||| ||||||||| |||||    
T  13867029 tgtttggattgacctatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaacctatga 13866946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 15120334 - 15120211
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| | |||||||  | ||||| ||| ||||||  || ||||  |||| ||||| |||||||||||||  |||| || || |||    
T  15120334 tgtttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttatgacatgttcattagctgt 15120235  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||| | |||||||| |||||||||    
T  15120234 tttaagcttattttgataagctct 15120211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 321
Target Start/End: Original strand, 43529777 - 43529900
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||| ||| |||||||| ||||||||| |||| |||  ||||| ||| ||| ||||  |||  ||||||||||| ||||||   |||| ||||| | |    
T  43529777 tgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataagctat 43529876  T
Q  298 tttcaacttattttcataagctct 321  Q
    |||||  |||||||||||||||||    
T  43529877 tttcagtttattttcataagctct 43529900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 680593 - 680539
Alignment:
Q  259 gagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttca 313  Q
    ||||||||||||||| |||||||  |||||||||  |||||||| ||||||||||    
T  680593 gagattatgaaaacagcttatgacatgtttataaactgttttcagcttattttca 680539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 7283118 - 7283024
Alignment:
Q  227 tttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| |||| |||||||||||||||||||    || || || |||||||||||||  |||  |||||||||||||| ||||| | ||||||||||    
T  7283118 tttgacataaacacttgtgagactatttggattagcttttggaaacaacttatgatatgtccataagttgttttcatcttatatccataagctct 7283024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 14666633 - 14666579
Alignment:
Q  264 tatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagc 318  Q
    |||| |||||||||||||  |||| ||| |||||||||| |||||||||||||||    
T  14666633 tatggaaacaacttatgacatgttcataggttgttttcaccttattttcataagc 14666579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 36677804 - 36677722
Alignment:
Q  198 tgtttggattcacttatttaagcttatct-tttggcatagacacttgtgagactatttgatagagattatgaaaacaacttat 279  Q
    |||||||||| |||||||| || |||||| |||| ||||  ||||||||||||||||  | |||| ||||||||||| |||||    
T  36677804 tgtttggattaacttatttgagtttatctatttgacataagcacttgtgagactattcaagagagcttatgaaaacagcttat 36677722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 41817254 - 41817196
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||| |||||||  |||| |||| ||||||||| ||||||| ||||||||||    
T  41817254 ttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagctct 41817196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 44606094 - 44606148
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    |||||||||||||||||||  |||  |||||||||||||| || |||||||||||    
T  44606094 ttatgaaaacaacttatgacatgtccataagttgttttcagctgattttcataag 44606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 9395195 - 9395158
Alignment:
Q  284 tgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  9395195 tgtttataagctgttttcagcttattttcataagctct 9395158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 9556330 - 9556269
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagct 319  Q
    |||| |||||||||||||| ||||  |||  |||||| | ||||||||||||||||||||||    
T  9556330 agagcttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagct 9556269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 13234637 - 13234536
Alignment:
Q  218 agcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    ||||||||  ||||||||  ||||||| ||||| ||||| || | |||  ||||||  ||||||  |||  |||||||||||||||||||| ||||||||    
T  13234637 agcttatcaattggcataagcacttgtaagactgtttgagagtgcttacaaaaacacattatgacatgtccataagttgttttcaacttatcttcataag 13234538  T
Q  318 ct 319  Q
    ||    
T  13234537 ct 13234536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 28810371 - 28810420
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgag 247  Q
    |||||||||| |||||||| ||||| ||| |||||||| |||||||||||    
T  28810371 tgtttggattgacttatttgagcttctctattggcataaacacttgtgag 28810420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 317
Target Start/End: Original strand, 40682400 - 40682433
Alignment:
Q  284 tgtttataagttgttttcaacttattttcataag 317  Q
    |||| |||||||||||||||||||||||||||||    
T  40682400 tgttcataagttgttttcaacttattttcataag 40682433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 44443394 - 44443349
Alignment:
Q  276 ttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||| |||| |||||||||||||| |||||||||||| |||||    
T  44443394 ttatgaaatgttcataagttgttttcagcttattttcatatgctct 44443349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 45314954 - 45314901
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataa 316  Q
    ||||| |||||||||||||  | |||||||||||||||||  ||||||||||||    
T  45314954 ttatgtaaacaacttatgacatatttataagttgttttcagtttattttcataa 45314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 11488366 - 11488305
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| |||||||||||||||||||  || | |||||||||||||| ||||||| ||||| ||||    
T  11488366 agagcttatgaaaacaacttatga--tggtcataagttgttttcagcttatttgcataatctct 11488305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Complemental strand, 16867799 - 16867767
Alignment:
Q  289 ataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||||||||||| ||||||||||    
T  16867799 ataagttgttttcaacttatttccataagctct 16867767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 27699491 - 27699531
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    |||||||||| ||||| |||| |||||||||||||||||||    
T  27699491 ttgtgagactgtttgagagagtttatgaaaacaacttatga 27699531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 34652026 - 34652078
Alignment:
Q  269 aaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||  |||  ||||| |||||||||||||||| ||||||||||    
T  34652026 aaacaacttatgacatgtccataagctgttttcaacttatttccataagctct 34652078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 35378516 - 35378572
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagct 319  Q
    ||||||||||| || ||||  |||| ||||||| |||||| ||||||||||||||||    
T  35378516 ttatgaaaacagctgatgacttgttcataagttattttcagcttattttcataagct 35378572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 4868550 - 4868430
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| | |||||| |  |||||| ||| ||||| ||||||||||||| ||||| |||| |||||||| ||||||||||  |||  |||||||||    
T  4868550 tgtttggattgatttatttgaatttatctattgacataggcacttgtgagactgtttgagagagtttatgaaa-caacttatgacatgtcaataagttgt 4868452  T
Q  298 tttcaacttattttcataagct 319  Q
    ||||||||||||| ||||||||    
T  4868451 tttcaacttatttacataagct 4868430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 10199330 - 10199450
Alignment:
Q  201 ttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgtttt 300  Q
    ||||||| |||||||| |||||||||  |  ||||  ||||||||| ||||||||  |||  | ||||||| | |||||||  |||| ||||||||||||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataagttgtttt 10199429  T
Q  301 caacttattttcataagctct 321  Q
    || ||||||||||||||||||    
T  10199430 cagcttattttcataagctct 10199450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 38170620 - 38170732
Alignment:
Q  209 acttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttat 308  Q
    |||||||||| ||||| |  ||||||  ||||||||||||||  |||  |||| ||||||||||| |||||||  |||| |||||||||||||| ||| |    
T  38170620 acttatttaaccttatatactggcatgaacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcataagttgttttcagcttgt 38170719  T
Q  309 tttcataagctct 321  Q
    |||| ||||||||    
T  38170720 tttcctaagctct 38170732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 317
Target Start/End: Original strand, 7217993 - 7218112
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| ||||||||||||||||||   |||||| |||||| ||||| | ||||   ||| || ||||||| ||||||||   ||| | ||| |||    
T  7217993 tgtttggattgacttatttaagcttatctaccggcataaacacttctgagattgtttgggggagcttgtgaaaacgacttatgacacgttcacaagctgt 7218092  T
Q  298 tttcaacttattttcataag 317  Q
    ||||||||||||||||||||    
T  7218093 tttcaacttattttcataag 7218112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 31517671 - 31517782
Alignment:
Q  210 cttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttatt 309  Q
    ||||||| ||||||| |  |||||||  ||||||||||||| ||||  |||  |||| ||||||||| ||||  |||| ||||| |||||||| ||||||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttatt 31517770  T
Q  310 ttcataagctct 321  Q
    ||||||||||||    
T  31517771 ttcataagctct 31517782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 4757487 - 4757406
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    ||||| || |||||||| ||||||||| ||| |||| ||||||||||||| |||||  |||  |||||||||||||||||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaacttatga 4757406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 37593614 - 37593726
Alignment:
Q  209 acttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttat 308  Q
    |||||||| ||||||| |  ||||||| |||||||| ||||| ||||  | |  | ||||| |||||||||||  |||| ||||| |||||||| |||||    
T  37593614 acttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttcagcttat 37593713  T
Q  309 tttcataagctct 321  Q
    |||||||||||||    
T  37593714 tttcataagctct 37593726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 6292643 - 6292521
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| |||||||||  || ||||  ||||| ||||| | ||||  ||| ||| | |||||| |||||||  |||| ||||| |||    
T  6292643 tgtttggattgacttatttgagcttatctactgacataagcacttttgagattgtttgggaga-atttttaaaacagcttatgacatgttcataagctgt 6292545  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||| ||||||||||||||||||    
T  6292544 tttcagcttattttcataagctct 6292521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 52014038 - 52013983
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatt 253  Q
    |||||||||| |||||||| ||||||||| |||||||| |||| ||||||||||||    
T  52014038 tgtttggattaacttatttgagcttatctattggcataaacacgtgtgagactatt 52013983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 3924710 - 3924652
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||| ||||||| ||||||||||||||||||  ||||||| ||||| ||||    
T  3924710 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactct 3924652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 29635433 - 29635383
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttca 313  Q
    |||||||||||| ||||||  ||||||||||||||||||| ||||||||||    
T  29635433 ttatgaaaacaagttatgacatgtttataagttgttttcagcttattttca 29635383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 27140623 - 27140506
Alignment:
Q  204 gattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaa 303  Q
    |||| |||||| | ||||||||| ||| |||| ||| |||| || || ||||| |||| ||| | ||||| |||||||  |||  ||||||||||||||     
T  27140623 gattgacttatatgagcttatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcag 27140524  T
Q  304 cttattttcataagctct 321  Q
    ||||||| ||||||||||    
T  27140523 cttatttgcataagctct 27140506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 50998629 - 50998568
Alignment:
Q  259 gagattatgaaaacaacttatgaagtgttt-ataagttgttttcaacttattttcataagct 319  Q
    |||||||||||||||||||||||  ||||| |||| | ||||||| ||||||||||||||||    
T  50998629 gagattatgaaaacaacttatgacatgtttaataaatggttttcagcttattttcataagct 50998568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 6262132 - 6262048
Alignment:
Q  237 acacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||| |||   |||| |||||| ||||||||||||  |||| ||||| | |||||||||||||| || |||||||    
T  6262132 acacttgtgagactgtttacaagagcttatgagaacaacttatgacatgttcataagctattttcaacttatttccacaagctct 6262048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 6659830 - 6659710
Alignment:
Q  199 gtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgtt 298  Q
    ||||||||| |||||||| |||||||||  | |||||  ||||||||||||||||||  | || |||||| |||||| | ||   |||  ||||||||||    
T  6659830 gtttggattgacttattttagcttatctactagcataagcacttgtgagactatttgggatagcttatgataacaacatttggcatgtccataagttgtt 6659731  T
Q  299 ttcaacttattttcataagct 319  Q
    |||| || ||||| |||||||    
T  6659730 ttcagctcattttaataagct 6659710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 269 - 320
Target Start/End: Complemental strand, 3223747 - 3223697
Alignment:
Q  269 aaacaacttatgaagtgtttataagttgttttcaacttattttcataagctc 320  Q
    |||||||||||||  ||||||||||||||||||| |||| ||||||||||||    
T  3223747 aaacaacttatgacatgtttataagttgttttcagctta-tttcataagctc 3223697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 25479691 - 25479609
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| ||||||||||||   ||| ||||||||| |  ||||||  |||| || ||||||||||| ||||||||||||||||||    
T  25479691 acttctgagactatttgtgtgagcttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctct 25479609  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 35925776 - 35925718
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||| |||||||  |||| ||||| |||||||||||||||| ||||| ||||    
T  35925776 ttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataaactct 35925718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 46252674 - 46252724
Alignment:
Q  271 acaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||  |||| ||||||||||||||  |||||||||||||||||    
T  46252674 acaacttatgacatgttcataagttgttttcaggttattttcataagctct 46252724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 6031453 - 6031514
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagct 319  Q
    |||| ||||||||||| ||||||| ||| | ||||||| |||||| ||||||||| ||||||    
T  6031453 agagcttatgaaaacagcttatgacgtgctcataagttcttttcaccttattttcgtaagct 6031514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 10169442 - 10169479
Alignment:
Q  285 gtttataagttgttttcaacttattttcataagctctg 322  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  10169442 gtttataagttgttttcaaattattttcataaactctg 10169479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 15361105 - 15361068
Alignment:
Q  284 tgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  15361105 tgttcataagttgttttcagcttattttcataagctct 15361068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 28910064 - 28910023
Alignment:
Q  275 cttatgaagtgtttataagttgttttcaacttattttcataa 316  Q
    |||||||  ||||||||||||||||||| |||||||||||||    
T  28910064 cttatgacttgtttataagttgttttcatcttattttcataa 28910023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 4033967 - 4034019
Alignment:
Q  229 tggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    ||||||| |||||||||||| | ||||| |||| ||||||||| |||||||||    
T  4033967 tggcataaacacttgtgagattgtttgagagagcttatgaaaataacttatga 4034019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 5276369 - 5276321
Alignment:
Q  273 aacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||  |||| ||||||||||||||| |||||||| ||||||||    
T  5276369 aacttatgacatgttcataagttgttttcaagttattttcttaagctct 5276321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 317
Target Start/End: Original strand, 26779935 - 26779963
Alignment:
Q  289 ataagttgttttcaacttattttcataag 317  Q
    |||||||||||||||||||||||||||||    
T  26779935 ataagttgttttcaacttattttcataag 26779963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 33108632 - 33108664
Alignment:
Q  289 ataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||||||||||| ||||||||||    
T  33108632 ataagttgttttcaacttatttccataagctct 33108664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 321
Target Start/End: Original strand, 2460070 - 2460193
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| |||||||    | |||||   |||||||||||| ||||| |||| ||||| |||||||||||||  ||| | ||||||||    
T  2460070 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgt 2460169  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||||||||||| ||||||||||    
T  2460170 tttcaacttatttccataagctct 2460193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 30863397 - 30863274
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||| | |||||||| ||| ||| | |||||||| |||||||| ||||| |||| ||||| |||||||||||||||||||  |||  |||||||||    
T  30863397 tgtttggagtgacttatttgagcctatttattggcataaacacttgttagactctttggtagagcttatgaaaacaacttatgacatgtacataagttgt 30863298  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||| |||| ||  |||||||||    
T  30863297 tttcagcttacttctataagctct 30863274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 3181028 - 3181085
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagtt 295  Q
    ||||||||||||||||||| |||| | ||| |||||||||||||| ||||||||||||    
T  3181028 cacttgtgagactatttgaaagagctaatgtaaacaacttatgaaatgtttataagtt 3181085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 7931685 - 7931770
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctctgt 323  Q
    |||||||||||| ||||   |||| |||||||||||||||||||  ||||  ||||||||||||| ||||||| | ||||||||||    
T  7931685 cacttgtgagaccatttagaagagcttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgt 7931770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 33498731 - 33498651
Alignment:
Q  237 acacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    |||||| ||||||| |||| ||||| |||||||||||||||||||  ||| |||| ||| |||||| ||||||| ||||||    
T  33498731 acacttctgagactttttggtagagcttatgaaaacaacttatgacatgtctataggttattttcagcttatttccataag 33498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 33832257 - 33832309
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcata 315  Q
    |||||||||||||||||||  ||||||||||||||||| | ||||||||||||    
T  33832257 ttatgaaaacaacttatgacatgtttataagttgtttttagcttattttcata 33832309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 2455366 - 2455295
Alignment:
Q  243 gtgagactatttgatagagattatgaaaacaacttatga-agtgtttataagttgttttcaacttattttca 313  Q
    |||| ||||||||| |||  ||||||||||||||||| | | ||||||||||||||||||| ||||||||||    
T  2455366 gtgaaactatttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattttca 2455295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 4081017 - 4080955
Alignment:
Q  248 actatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattt 310  Q
    ||||||||| |||  ||||||||||||||||||   |||| ||||||||||||||||||||||    
T  4081017 actatttgagagattttatgaaaacaacttatgccatgttcataagttgttttcaacttattt 4080955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 320
Target Start/End: Complemental strand, 33089657 - 33089535
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    ||||||| || |||||||| |||||||||  || ||||   | |||||||||||||| | |||  ||||||||||| |||| ||  ||||||||||||||    
T  33089657 tgtttgggttgacttatttgagcttatctactgacatatgtatttgtgagactatttcagagaacttatgaaaacagcttaggacatgtttataagttgt 33089558  T
Q  298 tttcaacttattttcataagctc 320  Q
    |||   |||||||||||| ||||    
T  33089557 tttacgcttattttcataggctc 33089535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 1575981 - 1575928
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataa 316  Q
    |||||||||||||||||||  |||| ||||| |||||| |||||||||||||||    
T  1575981 ttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 1669728 - 1669821
Alignment:
Q  209 acttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttca 302  Q
    ||||||||  |||||| ||||| ||||  ||||||| |||||| |||  |||| |||||||||||||||||||  ||| |||||| ||||||||    
T  1669728 acttatttgtgcttattttttgtcatatgcacttgtaagactaattgggagagcttatgaaaacaacttatgacatgtctataagctgttttca 1669821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 9027675 - 9027606
Alignment:
Q  252 tttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||| ||||| ||| |||||||||  |||  |||||||||||||| ||||||||||||||||||    
T  9027675 tttgaaagagcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataagctct 9027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 31624176 - 31624123
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataa 316  Q
    ||||||||||| |||||||  |||| ||||| ||||||||||||||||||||||    
T  31624176 ttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataa 31624123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 8035108 - 8035188
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagct 319  Q
    ||||| |||||||||||  |||  ||| |||||||||||||||  || | |||| ||||||||||||||||||| ||||||    
T  8035108 acttgagagactatttgggagaacttaagaaaacaacttatgacatggtcataacttgttttcaacttattttcgtaagct 8035188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 20368142 - 20368218
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    |||| ||||||||||  |||  |||||||||||||||||||  |||| ||||| |  ||||||||||||||||||||    
T  20368142 ttgtaagactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataag 20368218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 769265 - 769170
Alignment:
Q  222 tatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    ||||| |||| ||| |||||||||||||| ||||   ||  ||||||||||| |||||||  |||| ||||| ||||||||||||| |||| ||||    
T  769265 tatctattggtataaacacttgtgagactgtttggatgaacttatgaaaacatcttatgacatgttcataagctgttttcaacttactttcttaag 769170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 319
Target Start/End: Original strand, 2023395 - 2023426
Alignment:
Q  288 tataagttgttttcaacttattttcataagct 319  Q
    ||||||||||||||||||||||||||||||||    
T  2023395 tataagttgttttcaacttattttcataagct 2023426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 7148817 - 7148694
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    ||||||| || |||||||| |||||||||  | |||||  ||||||||||| | ||    |||| ||| | |||||||||||||  |||  ||||| | |    
T  7148817 tgtttggtttgacttatttgagcttatctagtcgcataagcacttgtgagagtgttcagcagagcttacggaaacaacttatgacttgtccataagctat 7148718  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||||||||||||||||||||||    
T  7148717 tttcaacttattttcataagctct 7148694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 7945867 - 7945926
Alignment:
Q  262 attatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||||||||   ||||||| ||||||||| | ||||||| ||||||||||    
T  7945867 attatgaaaacaacttatggcatgtttattagttgttttaagcttatttccataagctct 7945926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 30604993 - 30604930
Alignment:
Q  252 tttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcata 315  Q
    ||||| |||| |||| |||||||| |||||| |||| ||||||| |||||||||||||| ||||    
T  30604993 tttgagagagcttattaaaacaacctatgaaatgttcataagttcttttcaacttatttccata 30604930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 33080509 - 33080620
Alignment:
Q  210 cttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttatt 309  Q
    ||||||| ||||||| |  |||||||  ||||||||||| | ||| |||||  || ||||| ||||||||||  |||||||||||| ||||||  |||||    
T  33080509 cttatttgagcttatttactggcataagcacttgtgagattgtttaatagaatttctgaaaccaacttatgacatgtttataagttattttcagtttatt 33080608  T
Q  310 ttcataagctct 321  Q
    |  |||||||||    
T  33080609 tctataagctct 33080620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 34404006 - 34403883
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| |||| ||    | ||||| |||||||| ||||| |||   |||  ||| |||||||||||||||  |||| ||||| |||    
T  34404006 tgtttggattaacttatttcagctaataaactagcataaacacttgttagactgtttaggagaagttaagaaaacaacttatgacatgttcataaggtgt 34403907  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||| ||||||| ||||||||||    
T  34403906 tttcaccttatttccataagctct 34403883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 281808 - 281890
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||| ||||  |||| | ||| || ||||||||||  ||| ||||||||||||||| ||||||| ||| ||||||    
T  281808 acttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctct 281890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 6647461 - 6647415
Alignment:
Q  275 cttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||  |||| ||||| |||||||||||||||||||||||||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctct 6647415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 27857496 - 27857426
Alignment:
Q  211 ttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    |||||| || ||||||  || ||||||||||||||| ||| ||||  |||| |||||||||||||||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatga 27857426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 738461 - 738542
Alignment:
Q  199 gtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatg 280  Q
    ||||||||| |||||||| ||||||||| |||  ||| ||| |||||||| | | ||||| || ||||||||||| ||||||    
T  738461 gtttggattaacttatttgagcttatctattgagataaacatttgtgagattgtctgataaagtttatgaaaacagcttatg 738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 3528884 - 3528831
Alignment:
Q  268 aaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||||||  |||  |||| ||||||||| ||||||||||||||||||    
T  3528884 aaaacaacttatgacatgtccataacttgttttcatcttattttcataagctct 3528831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 31421036 - 31420975
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagct 319  Q
    |||| |||||||||||||||||    | || |||||||||||||| ||||||||||||||||    
T  31421036 agagcttatgaaaacaacttatcgcatattcataagttgttttcagcttattttcataagct 31420975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 31668475 - 31668430
Alignment:
Q  231 gcatagacacttgtgagactatttgatagagattatgaaaacaact 276  Q
    ||||| ||||||||||||||||| || |||| ||||||||||||||    
T  31668475 gcataaacacttgtgagactattagagagagcttatgaaaacaact 31668430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 6537023 - 6536975
Alignment:
Q  273 aacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||  |||| |||||||||||||| ||||||| ||||||||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttccataagctct 6536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 7785734 - 7785786
Alignment:
Q  269 aaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||||||  ||| ||||||||||||||| ||||||| ||||||||||    
T  7785734 aaacagcttatgacatgtctataagttgttttcagcttatttccataagctct 7785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 9667975 - 9668027
Alignment:
Q  269 aaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||  |||  ||||| |||||||||||||||| ||||||||||    
T  9667975 aaacaacttatgacatgtccataagctgttttcaacttatttccataagctct 9668027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 20377899 - 20377951
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattt 310  Q
    |||| |||||||||||||||||||  ||| ||||||||||||||  |||||||    
T  20377899 agagcttatgaaaacaacttatgacatgtctataagttgttttcggcttattt 20377951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 27693399 - 27693463
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaa 303  Q
    |||||||||||||||||| |||  ||||| |||||||||||||  |||| ||||| | |||||||    
T  27693399 acttgtgagactatttgagagaatttatggaaacaacttatgacatgttcataagctattttcaa 27693463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 28641728 - 28641792
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctctg 322  Q
    |||| ||||||||||| ||||| |  |||| ||||| |||||| | |||||||||||||||||||    
T  28641728 agagcttatgaaaacagcttataacatgttcataagctgtttttagcttattttcataagctctg 28641792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 318
Target Start/End: Complemental strand, 33887941 - 33887861
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagc 318  Q
    ||||||||| | | ||||| |||  ||||||||| | |||||||  |||| | |||||||||||||||||||| |||||||    
T  33887941 cacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttatttccataagc 33887861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 35070477 - 35070509
Alignment:
Q  289 ataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||||||||||||||||||||||||||    
T  35070477 ataagctgttttcaacttattttcataagctct 35070509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 321
Target Start/End: Original strand, 27123271 - 27123394
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| |||||||    | |||||   |||||||||||| ||||| |||| ||||| |||||||||||||  ||| | ||||||||    
T  27123271 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgt 27123370  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||||||||||| ||||||||||    
T  27123371 tttcaacttatttccataagctct 27123394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 6428169 - 6428046
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||| ||| |||||||| ||||||| | |||| |||  ||||||||||||  ||||| ||||||||||||||||||||||||  |||  ||||||||     
T  6428169 tgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataagttga 6428070  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||| | | ||||| ||||||||||    
T  6428069 tttaagcatatttccataagctct 6428046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 33534099 - 33534211
Alignment:
Q  209 acttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttat 308  Q
    |||||||| |||||||||  || ||||   |||||||||| ||||||| |||| |||||||||||| || |||  | |  |||||||||||||| |||||    
T  33534099 acttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataagttgttttcagcttat 33534198  T
Q  309 tttcataagctct 321  Q
    |||||||||||||    
T  33534199 tttcataagctct 33534211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 2996684 - 2996601
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||| ||||||| ||||| |||| |||||||||||||||||||  |||  ||||| | ||||||||||||||||||| |||||    
T  2996684 cacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctct 2996601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 311
Target Start/End: Original strand, 7367973 - 7368086
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| || ||||||   |||||| || ||||||||||| ||||  |||| | ||||||||| |||||||  |||||||||| ||     
T  7367973 tgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgtttataagctgc 7368072  T
Q  298 tttcaacttatttt 311  Q
    ||||||| ||||||    
T  7368073 tttcaacatatttt 7368086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 18628486 - 18628558
Alignment:
Q  212 tatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagt 284  Q
    ||||| |||||||||  || |||| |||||||||||||| ||||  |||| ||||||||||||||||||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatgaagt 18628558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 28300283 - 28300341
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||| | |||||  ||||  ||||||||||||||||||||||||||||||||    
T  28300283 ttatgaaaacagcctatgacatgttcttaagttgttttcaacttattttcataagctct 28300341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 317
Target Start/End: Complemental strand, 44320087 - 44319981
Alignment:
Q  211 ttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattt 310  Q
    |||||| |||||| || |||||||| ||| |||||||||| ||||  |||| |||||||||||| |||||| || |  || || | ||||||||| ||||    
T  44320087 ttatttgagcttacctattggcataaacaattgtgagactgtttgggagagcttatgaaaacaaattatgatgtatccattagctattttcaactaattt 44319988  T
Q  311 tcataag 317  Q
    |||||||    
T  44319987 tcataag 44319981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 46019589 - 46019671
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||| | | ||| |||| |||| || | |||||||||  |||| |||||||||||||||||||| ||||||||||||    
T  46019589 acttgtgagattgtctgaaagagtttataaacagaacttatgacatgttgataagttgttttcaacttatattcataagctct 46019671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 46247323 - 46247233
Alignment:
Q  231 gcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||||||||||| | | ||| |||  ||||||||| |||||||||  |||| ||||||||| |||||||||| ||| ||||||||    
T  46247323 gcataaacacttgtgagattgtctgagagatcttatgaaaagaacttatgacatgttgataagttgtcttcaacttatattcttaagctct 46247233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 322
Target Start/End: Original strand, 25548138 - 25548171
Alignment:
Q  289 ataagttgttttcaacttattttcataagctctg 322  Q
    ||||||||||||||||||||||||||||||||||    
T  25548138 ataagttgttttcaacttattttcataagctctg 25548171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 4071989 - 4071925
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttca 302  Q
    ||||||||||||| ||||| |||| ||||||||||| |||||||  ||||  |||||||||||||    
T  4071989 cacttgtgagactgtttgagagagcttatgaaaacagcttatgatttgttggtaagttgttttca 4071925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 316
Target Start/End: Original strand, 3176034 - 3176141
Alignment:
Q  209 acttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttat 308  Q
    |||||||  ||||||| | |||||| | |||||||||| ||| |||   |||| ||||||||||| ||||||   ||| ||||||||||||||| |||||    
T  3176034 acttattcgagcttatatgttggcacaaacacttgtgaaactgtttaggagagcttatgaaaacatcttatgtcatgtctataagttgttttcagcttat 3176133  T
Q  309 tttcataa 316  Q
    || |||||    
T  3176134 ttccataa 3176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 317
Target Start/End: Complemental strand, 4691959 - 4691880
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    ||||||||||||||||||| | |  ||||| |||||||||||||  ||   ||| |||||||||| ||||||||||||||    
T  4691959 cacttgtgagactatttgagaaaacttatggaaacaacttatgacatgcccatatgttgttttcagcttattttcataag 4691880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 28232656 - 28232573
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||| |||||| ||||  |||| || || |||||||||||||  | ||||||||||||||||| ||||||| || |||||||    
T  28232656 cacttgcgagactgtttggaagagcttgtggaaacaacttatgacttatttataagttgttttcatcttatttccacaagctct 28232573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 1137798 - 1137740
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||| |||||||  |||| ||||||||||||||  |||||| ||||||||||    
T  1137798 ttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctct 1137740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 314
Target Start/End: Complemental strand, 20907412 - 20907382
Alignment:
Q  284 tgtttataagttgttttcaacttattttcat 314  Q
    |||||||||||||||||||||||||||||||    
T  20907412 tgtttataagttgttttcaacttattttcat 20907382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 20936213 - 20936271
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||||||||  |||| ||||| |||||||| ||||||| ||||| ||||    
T  20936213 ttatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataatctct 20936271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 24193684 - 24193634
Alignment:
Q  197 gtgtttggattcacttatttaagcttatcttttggcatagacacttgtgag 247  Q
    ||||||||||| |||||||| |||||||||  ||||||| |||||||||||    
T  24193684 gtgtttggattgacttatttgagcttatctcctggcataaacacttgtgag 24193634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 25497666 - 25497584
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||  |||| || || ||||||||| | |||||||||||| ||||||| |||||| ||| ||||  |||||||||    
T  25497666 acttgtgagacagtttggtaaagcttatgaaaatatcttatgaagtgtatataagtcgttttcgactgatttctataagctct 25497584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 321
Target Start/End: Original strand, 46013265 - 46013355
Alignment:
Q  231 gcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||||||||||| | | ||| |||  ||||||||| ||||||||   |||| ||||||||| |||||||||| ||| ||||||||    
T  46013265 gcataaacacttgtgagattgtctgagagatcttatgaaaagaacttatggcatgttgataagttgtcttcaacttatattcttaagctct 46013355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 52259697 - 52259659
Alignment:
Q  283 gtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  52259697 gtgtttataagctattttcaacttattttcataagctct 52259659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 679865 - 679746
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| ||| |||| |||||||||   || |||  |||||| ||||||| ||| ||||  ||||||||||| |||||||  |||| ||||  |||    
T  679865 tgtttggattgactaatttgagcttatct---ggtataagcacttg-gagactacttggtagaagttatgaaaacatcttatgatatgttcataaactgt 679770  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||| | ||||||||||||||||    
T  679769 tttcagcatattttcataagctct 679746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 42461362 - 42461281
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagct 319  Q
    ||||| ||||||| ||||  |||  ||||||||| | | ||||| ||||| |||||||| ||||| ||||||||||||||||    
T  42461362 cacttatgagactgtttgggagaacttatgaaaatagcctatgacgtgttcataagttgatttcagcttattttcataagct 42461281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 47146027 - 47145990
Alignment:
Q  284 tgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  47146027 tgttcataagttgttttcaccttattttcataagctct 47145990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 47800731 - 47800651
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||| |||||| ||||| ||  |||||||||||| |||||    ||||||||||  ||||||| ||||||||||||||||||    
T  47800731 cacttgcgagactgtttgagagtaattatgaaaacagcttata---tgtttataagcggttttcagcttattttcataagctct 47800651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 2592299 - 2592351
Alignment:
Q  269 aaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||| | |||| | ||||||||||||| ||||||| ||||||||||    
T  2592299 aaacaacttataatgtgtctgtaagttgttttcagcttatttccataagctct 2592351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 23819197 - 23819117
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||| ||||  |||| ||| ||||||| |||||||  |||  |||||||||||||| |||||||  |||||||||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctct 23819117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 39178185 - 39178297
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| || ||||||||| |||||  || |||| |||||| ||| ||| ||||  |||  ||||||||||  |||||||   ||| ||||| |||    
T  39178185 tgtttggattgacgtatttaagcatatctactgacataaacacttttgacactgtttgggagaacttatgaaaaccgcttatgacacgttaataagatgt 39178284  T
Q  298 tttcaacttattt 310  Q
    |||||||||||||    
T  39178285 tttcaacttattt 39178297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 318
Target Start/End: Original strand, 11297115 - 11297235
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||| ||| ||||||||||||||||||  ||||||| |||||||| ||||| ||||| |||| ||||| |||||||||| ||  |||  || || | |    
T  11297115 tgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtcaattagctat 11297214  T
Q  298 tttcaacttattttcataagc 318  Q
    ||||| |||||||||||||||    
T  11297215 tttcagcttattttcataagc 11297235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 8090040 - 8089964
Alignment:
Q  245 gagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||| |||| |||||||||||||||||||  | ||  |||| |||||||| ||||||||||||||||||    
T  8090040 gagactatttgagagagcttatgaaaacaacttatgatatattcctaagctgttttcagcttattttcataagctct 8089964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 6593411 - 6593327
Alignment:
Q  237 acacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||||||||  |||  ||||||||||| ||| ||| ||||| | ||| | |||||| ||||||||||||||||||    
T  6593411 acacttgtgagactatttgggagaatttatgaaaacagcttttgatgtgttaacaagctcttttcagcttattttcataagctct 6593327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 310
Target Start/End: Complemental strand, 10391481 - 10391381
Alignment:
Q  210 cttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttatt 309  Q
    |||||||||||||||||  |||||||  ||||||||||| | ||||  |||| |||| ||||||  ||||||  ||| ||| ||||||||||||||||||    
T  10391481 cttatttaagcttatctgctggcataatcacttgtgagattgtttggaagagtttataaaaacactttatgacatgtctattagttgttttcaacttatt 10391382  T
Q  310 t 310  Q
    |    
T  10391381 t 10391381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 12459920 - 12460044
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| ||||||||  ||||||||  || ||||  ||| ||||||||| ||||  |||   ||||||||||||||||||  |||| ||| |||||    
T  12459920 tgtttggattgacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatgttcatatgttgt 12460019  T
Q  298 tttcaacttattttcataagctctg 322  Q
    |||   |||||||||||||||||||    
T  12460020 ttttggcttattttcataagctctg 12460044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 10125649 - 10125760
Alignment:
Q  210 cttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttatt 309  Q
    |||||||||||||||||  || |||   ||||||||| | | | ||| |||  ||||| |||||||||||||  |||| ||||| |||||||| ||||||    
T  10125649 cttatttaagcttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttatt 10125748  T
Q  310 ttcataagctct 321  Q
    ||||||||||||    
T  10125749 ttcataagctct 10125760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 13604828 - 13604891
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| ||||||||||| |||||||  |||  ||| |||||||||||||||||||||||||||||    
T  13604828 agagcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataagctct 13604891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 4273309 - 4273407
Alignment:
Q  211 ttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttatt 309  Q
    |||||| ||||| ||| |||||||| ||| |||||||| | ||||| |||   |||| ||||| |||||||  ||| ||||||||||||||||||||||    
T  4273309 ttattttagcttgtctattggcataaacatttgtgagattgtttgagagaacctatggaaacagcttatgacttgtctataagttgttttcaacttatt 4273407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 37611175 - 37611257
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||| | ||||| |||| ||||||||||||||| |||  |||| ||||| ||||||||  |||||| ||||||||||    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctct 37611257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 37787905 - 37787987
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||| | ||||| |||| ||||||||||||||| |||  |||| ||||| ||||||||  |||||| ||||||||||    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctct 37787987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 12467212 - 12467163
Alignment:
Q  270 aacaacttatgaagtgtttataagttgttttcaacttattttcataagct 319  Q
    ||||||||||||  |||||||||| |||||||| ||||||||||||||||    
T  12467212 aacaacttatgacatgtttataagctgttttcagcttattttcataagct 12467163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 11457238 - 11457166
Alignment:
Q  209 acttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    |||||||| ||||||||| |||||| | |||||||||||||| |||   |||| ||||| |||||||||||||    
T  11457238 acttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatga 11457166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 321
Target Start/End: Complemental strand, 31694578 - 31694546
Alignment:
Q  289 ataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||||||||||||||||||||||    
T  31694578 ataagttgttttcaacttattttcataagctct 31694546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 320
Target Start/End: Original strand, 8651271 - 8651394
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaag-tgtttataagttg 296  Q
    ||||||||||  ||||||| |||||||||| | ||||| ||||| |||||| |||| |  |||| ||||| ||||| ||||| ||  |||  ||||||||    
T  8651271 tgtttggattgccttatttgagcttatcttctagcataaacactcgtgagagtattcggaagagcttatggaaacagcttataaacatgtccataagttg 8651370  T
Q  297 ttttcaacttattttcataagctc 320  Q
    |||||| | ||||| |||||||||    
T  8651371 ttttcagcatatttccataagctc 8651394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 10272390 - 10272473
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||| |||||||||  || | ||||  |||||||||||||  ||| | ||||||||||||| ||||||||||||| ||||    
T  10272390 cacttgtgtgactatttgggagtgcttatagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactct 10272473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 321
Target Start/End: Complemental strand, 6109621 - 6109511
Alignment:
Q  211 ttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattt 310  Q
    |||||| || || ||| |||||||| |||||||||||| |||||   |||| ||||| ||| || ||||||  |||  |||||||||||||| |||||||    
T  6109621 ttatttgagtttgtctattggcataaacacttgtgagaatattttggagagcttatggaaaaaaattatgatatgtccataagttgttttcagcttattt 6109522  T
Q  311 tcataagctct 321  Q
     || |||||||    
T  6109521 ccaaaagctct 6109511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 7674734 - 7674684
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttca 313  Q
    ||||| |||||||||||||  |||||||||| |||||||| ||||||||||    
T  7674734 ttatggaaacaacttatgacatgtttataaggtgttttcagcttattttca 7674684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 7907999 - 7907909
Alignment:
Q  232 catagacacttgtgagactatttgatagagattatgaaaacaactta-tgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| |||||| ||||||| ||||  |||  ||||||||||||| || |||| | || |||||||||||||| |||| |||||||||||||    
T  7907999 cataaacacttatgagactgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctct 7907909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 36578561 - 36578503
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||||||||| |  ||||||| |||| ||||||| |||||||||||| ||||    
T  36578561 ttatgaaaacaacttataatatgtttattagttattttcaatttattttcataaactct 36578503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 3734608 - 3734665
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttg 255  Q
    |||||||||| ||||||||||| |||||| |||||||  | |||||| ||||||||||    
T  3734608 tgtttggattgacttatttaagattatctattggcattaatacttgtaagactatttg 3734665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 321
Target Start/End: Complemental strand, 10296468 - 10296439
Alignment:
Q  292 agttgttttcaacttattttcataagctct 321  Q
    ||||||||||||||||||||||||||||||    
T  10296468 agttgttttcaacttattttcataagctct 10296439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 11296924 - 11297001
Alignment:
Q  204 gattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    |||| ||||||||||||||||||   |||| | ||| ||  |||||||||||  |||| |||||||||||||||||||    
T  11296924 gattgacttatttaagcttatctaggggcaaaaacatttacgagactatttggaagagcttatgaaaacaacttatga 11297001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 11707120 - 11707083
Alignment:
Q  284 tgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  11707120 tgtttataagttgttttcagcttattttcaaaagctct 11707083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 17258868 - 17258925
Alignment:
Q  264 tatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||| | |||||||  |||| ||||| |||||||| ||||||||||||||||||    
T  17258868 tatgaaaatagcttatgacatgttcataagctgttttcagcttattttcataagctct 17258925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 7985078 - 7985002
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatgaagt-gtttataagttgttttcaacttattttcataa 316  Q
    |||||||||||||||  |||| ||| ||||||| ||| ||| || ||| ||||| |||||||| |||||||||||||    
T  7985078 ttgtgagactatttgggagagcttaagaaaacagcttgtgacgttgttcataagctgttttcagcttattttcataa 7985002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 10907499 - 10907447
Alignment:
Q  228 ttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatg 280  Q
    |||||||  |||||||||||||| ||||  |||| ||||||||||||||||||    
T  10907499 ttggcatgaacacttgtgagactgtttggaagagcttatgaaaacaacttatg 10907447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 317
Target Start/End: Complemental strand, 12425631 - 12425603
Alignment:
Q  289 ataagttgttttcaacttattttcataag 317  Q
    |||||||||||||||||||||||||||||    
T  12425631 ataagttgttttcaacttattttcataag 12425603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 31688119 - 31688067
Alignment:
Q  269 aaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||||||  ||| |||||| | |||||||||||||||||||||||||    
T  31688119 aaacagcttatgacttgtctataagctattttcaacttattttcataagctct 31688067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 33533549 - 33533581
Alignment:
Q  289 ataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||||||||||| ||||||||||    
T  33533549 ataagttgttttcaacttatttccataagctct 33533581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Complemental strand, 35531199 - 35531167
Alignment:
Q  289 ataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||||||||||||||||||||||||||    
T  35531199 ataagctgttttcaacttattttcataagctct 35531167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 36796626 - 36796678
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagact 250  Q
    |||||||||| |||||||| |||||||||  || |||| ||||||||||||||    
T  36796626 tgtttggattgacttatttgagcttatctaatgacataaacacttgtgagact 36796678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 25670516 - 25670628
Alignment:
Q  209 acttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttat 308  Q
    ||||| || ||||||||| ||| ||||  | ||||||||||| ||||| | |  |||||||||||||||||||  |||| |||| ||||||||| |||||    
T  25670516 acttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagcttat 25670615  T
Q  309 tttcataagctct 321  Q
    ||||| |||||||    
T  25670616 tttcacaagctct 25670628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 321
Target Start/End: Original strand, 22387849 - 22387938
Alignment:
Q  232 catagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| |||| ||||||||| ||||  |||| ||||||||||||||||||   |||||||||  |||||| ||||||||| ||||||||||    
T  22387849 cataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagctct 22387938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 293
Target Start/End: Complemental strand, 8094445 - 8094362
Alignment:
Q  210 cttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataag 293  Q
    ||||||| |||||||||  | |||||  ||||||||||||||||||| |||  ||||||||||| |||||||  ||||||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgtttataag 8094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 23215006 - 23214923
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    |||||||||| |||||||| | |||||||  | ||||| |||||| ||||||| ||||| |||  |||||||||||||||||||    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatga 23214923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 46082127 - 46082064
Alignment:
Q  258 agagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||| |||||||||||||||||||  ||   |||||||||||||| ||||||||||||||||||    
T  46082127 agagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctct 46082064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 15740395 - 15740448
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataa 316  Q
    |||||||||||||||||||  |||| ||||| |||||| |||||||||||||||    
T  15740395 ttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 30317048 - 30316999
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttc 312  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||||||||    
T  30317048 ttatgaaaacaacttataaaatgttaataagctgttttcaacttattttc 30316999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 33894778 - 33894666
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    ||||||||||  ||||||| ||||||||   || ||||  ||||||||||||| ||||  |||| ||||||||||| | |||||  |||  |||||||||    
T  33894778 tgtttggattagcttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgt 33894679  T
Q  298 tttcaacttattt 310  Q
    ||||| |||||||    
T  33894678 tttcagcttattt 33894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 34036026 - 34035954
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatga-agtgtttataagttgttttcaacttattttc 312  Q
    ||||||||||| |||  |||  ||||||||| ||||||||| | |||| ||||||||||||||||||||||||    
T  34036026 ttgtgagactacttggaagaacttatgaaaataacttatgacattgttcataagttgttttcaacttattttc 34035954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 34754740 - 34754852
Alignment:
Q  209 acttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttat 308  Q
    |||| ||| ||||||||| ||| || | |||||| ||||||| ||||| |||| ||| ||||||| |||||||   |  ||||||||||||||| |||||    
T  34754740 acttgtttgagcttatctattgacacaaacacttatgagactgtttgagagagcttaagaaaacatcttatgacaagcctataagttgttttcagcttat 34754839  T
Q  309 tttcataagctct 321  Q
    || ||| ||||||    
T  34754840 ttccatcagctct 34754852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 318
Target Start/End: Complemental strand, 44808297 - 44808189
Alignment:
Q  210 cttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttatt 309  Q
    ||||||| ||||||| | || |||||  || |||| ||||| |||||||||  ||||||||| |||||||||  |||  ||||  |||||||| ||||||    
T  44808297 cttatttgagcttatttattagcataagcagttgtcagactgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttcagcttatt 44808198  T
Q  310 ttcataagc 318  Q
    |||||||||    
T  44808197 ttcataagc 44808189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 1423040 - 1422917
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    ||||| |||| |||||||| ||  | ||| |||| |||||||||| ||||| | ||| | |||| ||||||||| |  ||||||   || ||||| ||||    
T  1423040 tgtttagattgacttatttgagtctctctattggtatagacacttatgagattgtttaagagagcttatgaaaatagtttatgacaagtctataaattgt 1422941  T
Q  298 tttcaacttattttcataagctct 321  Q
    |||||| |||||||||||||||||    
T  1422940 tttcaatttattttcataagctct 1422917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 19022568 - 19022623
Alignment:
Q  263 ttatgaaaacaacttatga-agtgtttataagttgttttcaacttattttcataag 317  Q
    ||||||||||||||||||| | | || ||||||||| |||||||||||||||||||    
T  19022568 ttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataag 19022623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 290 - 321
Target Start/End: Complemental strand, 25596092 - 25596061
Alignment:
Q  290 taagttgttttcaacttattttcataagctct 321  Q
    ||||||||||||||||||||||||||||||||    
T  25596092 taagttgttttcaacttattttcataagctct 25596061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 313
Target Start/End: Complemental strand, 36538027 - 36537944
Alignment:
Q  230 ggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttca 313  Q
    |||||| |||||||||||| | ||||| |||  ||||| |||||||||||||  |||| |||||||||||| | ||| ||||||    
T  36538027 ggcataaacacttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcataagttgtttttagctttttttca 36537944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 44289964 - 44290035
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaa 271  Q
    |||| ||| |||||||| |||||||||  ||||||||||||| |||||||||||  | |||| |||||||||    
T  44289964 tttgcattgacttatttgagcttatctagtggcatagacactggtgagactattcaagagagtttatgaaaa 44290035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 529510 - 529456
Alignment:
Q  201 ttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttg 255  Q
    ||||||| |||||||| |||||||||  ||||||| ||||||||||| |||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgaggctatttg 529456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 310
Target Start/End: Original strand, 28727684 - 28727794
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttt 299  Q
    |||||||| |||||||| ||||||||||||| | ||   ||||| |||||| ||||| |||| ||||| ||||  |||||||  ||||  || |||||||    
T  28727684 tttggattaacttatttgagcttatcttttgacctaagaacttgcgagactgtttgagagagcttatggaaacggcttatgacatgttcgtatgttgttt 28727783  T
Q  300 tcaacttattt 310  Q
    ||| |||||||    
T  28727784 tcagcttattt 28727794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 44822041 - 44821991
Alignment:
Q  267 gaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    ||||||||||||  || |||  |||||||||||||||||||||||||||||    
T  44822041 gaaaacaacttaaaaaatgtcaataagttgttttcaacttattttcataag 44821991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 7244777 - 7244708
Alignment:
Q  252 tttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||| | ||| |||||| ||||||  || | |||||||||||||| ||||||||||||||||||    
T  7244777 tttgaaagagctgatggaaacaatttatgacatgctcataagttgttttcagcttattttcataagctct 7244708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 12234810 - 12234931
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttt 299  Q
    |||||||| ||||| || |||||||||  ||||||   ||| |||||||||  |||  | || ||||  |||||||||||||  ||| |||||| |||||    
T  12234810 tttggattgacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataagctgttt 12234909  T
Q  300 tcaacttattttcataagctct 321  Q
    ||| ||||||| ||||||||||    
T  12234910 tcagcttatttccataagctct 12234931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 20526890 - 20526967
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatga-agtgtttataagttgttttcaacttattttcataag 317  Q
    |||||||||| ||||| |||  | ||||||||| ||||||| | |||||||||| | |||||| ||||||||||||||    
T  20526890 ttgtgagactgtttgagagaactgatgaaaacagcttatgagattgtttataagatcttttcagcttattttcataag 20526967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 321
Target Start/End: Complemental strand, 22204525 - 22204496
Alignment:
Q  292 agttgttttcaacttattttcataagctct 321  Q
    ||||||||||||||||||||||||||||||    
T  22204525 agttgttttcaacttattttcataagctct 22204496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 321
Target Start/End: Original strand, 22230214 - 22230243
Alignment:
Q  292 agttgttttcaacttattttcataagctct 321  Q
    ||||||||||||||||||||||||||||||    
T  22230214 agttgttttcaacttattttcataagctct 22230243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 39360129 - 39360052
Alignment:
Q  243 gtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctc 320  Q
    |||||||| |||||||||| ||||| |||||||||||||  | |  |||||||| ||||| |||||||  ||||||||    
T  39360129 gtgagactgtttgatagagtttatggaaacaacttatgacatatccataagttgctttcagcttatttcaataagctc 39360052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 47395103 - 47395140
Alignment:
Q  284 tgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  47395103 tgtttataagttgttttcaacttatttccataggctct 47395140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 13960648 - 13960723
Alignment:
Q  203 ggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttat 279  Q
    ||||| |||||||| ||||||||  ||| ||||  |||||| |||||||||||| |||| ||||||||||| |||||    
T  13960648 ggattgacttatttgagcttatccattg-cataagcacttgcgagactatttgagagagcttatgaaaacagcttat 13960723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 36646301 - 36646413
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||  |||||||||||| ||||| ||||||||| ||||||| ||||||||||  |||| ||||| |||| |||||||   |||  ||||| |||    
T  36646301 tgtttggatcgacttatttaagcatatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctgt 36646400  T
Q  298 tttcaacttattt 310  Q
    ||||| |||||||    
T  36646401 tttcatcttattt 36646413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 24281158 - 24281075
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||| || | ||||| |||| |||||||||||||||||||  | |  ||||||||||||||||||| |||||||||||||    
T  24281158 cacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataagttgttttcaacttactttcataagctct 24281075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 2175808 - 2175876
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaactt 306  Q
    ||||||| ||||||||||| | || |||||||||||||||||||  ||||| |||| ||||||||||||    
T  2175808 cacttgtaagactatttgagatagtttatgaaaacaacttatgacatgtttgtaagctgttttcaactt 2175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 3044249 - 3044301
Alignment:
Q  269 aaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||  |||| ||||| |||||||||||||||||||||||||||    
T  3044249 aaacaacttatgacatgttcataagctgttttcaacttattttcataagctct 3044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 39602172 - 39602248
Alignment:
Q  241 ttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    ||||||| |||||||  |||| ||||||| ||| |||||||  |||| |||| ||||||||||||||||||||||||    
T  39602172 ttgtgaggctatttggaagagcttatgaagacagcttatgacatgttcataaattgttttcaacttattttcataag 39602248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 14548680 - 14548763
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||||||||| ||||| |||| ||||||||||||| |||||  | || ||| | |||||||| ||||||| ||||||||||    
T  14548680 cacttgtgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctct 14548763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 317
Target Start/End: Complemental strand, 37273245 - 37273166
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    |||| |||||||| ||||  |||| ||||| |||||||||||||  |||  |||||||||||||||||||||| ||||||    
T  37273245 cactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataag 37273166  T

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Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 321
Target Start/End: Complemental strand, 43115195 - 43115084
Alignment:
Q  210 cttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttatt 309  Q
    ||||| |||| |||||| ||| ||||  ||||||||||| | ||||  |||| ||||| |||||||||||||  |||  |||| ||||||||| ||||||    
T  43115195 cttatataaggttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatt 43115096  T
Q  310 ttcataagctct 321  Q
    | ||||||||||    
T  43115095 tccataagctct 43115084  T

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Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 50016035 - 50015936
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttt 299  Q
    ||||||||  ||||| | || |||||| |||||||| |||||||||||||| ||||| |||  ||||||||| ||| |||||  |||||||||| |||||    
T  50016035 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgtttataagatgttt 50015936  T

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Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 5391965 - 5391911
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataag 317  Q
    ||||||||||| |||||||  |||| ||||| |||||||||||||||||||||||    
T  5391965 ttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataag 5391911  T

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Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 321
Target Start/End: Complemental strand, 27793010 - 27792900
Alignment:
Q  211 ttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattt 310  Q
    |||||| ||||||||| ||| |||| ||||  |||||||| |||||||||| ||||| ||| | ||| |||    ||||||||||||||||| |||||||    
T  27793010 ttatttgagcttatctattgacataaacacacgtgagactgtttgatagagtttatggaaatagcttttgacaaatttataagttgttttcagcttattt 27792911  T
Q  311 tcataagctct 321  Q
      |||||||||    
T  27792910 ctataagctct 27792900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 47513739 - 47513681
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||| ||||||   ||| ||||||||||||||| |||||||||||||||||    
T  47513739 ttatgaaaacaagttatgacacgttcataagttgttttcaatttattttcataagctct 47513681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 51929892 - 51929835
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttg 255  Q
    |||||||||| |||||||| ||||||||| || ||||| ||||||||||| |||||||    
T  51929892 tgtttggattgacttatttgagcttatctattagcataaacacttgtgaggctatttg 51929835  T

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Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 3015821 - 3015885
Alignment:
Q  257 tagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||| |||||||||||||||||||  |||  ||||| |||||||| |||||||| |||||||||    
T  3015821 tagagcttatgaaaacaacttatgacatgtccataagatgttttcatcttattttaataagctct 3015885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 25925818 - 25925770
Alignment:
Q  273 aacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||  |||| ||||| |||||||||||||||||||||||||||    
T  25925818 aacttatgacatgttcataagctgttttcaacttattttcataagctct 25925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 41633509 - 41633388
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    ||||||||||   |||||| ||||||||| |||||| |  ||||| ||||||||||    |||| |||| ||||||| | ||||  ||| ||||| ||||    
T  41633509 tgtttggattggtttatttgagcttatctattggcaaa--cacttatgagactattcaggagaggttataaaaacaaatcatgacatgtctataaattgt 41633412  T
Q  298 tttcaacttattttcataagctct 321  Q
    ||||| ||||||||||||||||||    
T  41633411 tttcagcttattttcataagctct 41633388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 42745124 - 42745068
Alignment:
Q  263 ttatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagct 319  Q
    ||||| |||||||||||||  |||| |||||||||||||| ||||||| ||||||||    
T  42745124 ttatgtaaacaacttatgacatgttcataagttgttttcatcttatttccataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 2152137 - 2152220
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||| |||| | |  |||||||||||||||||||  ||||  |||| |||||||||||| |||  |||||||||    
T  2152137 cacttgtgagactaattgagatattttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctct 2152220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 11093743 - 11093708
Alignment:
Q  76 ttcaattgcggagcttgcatttcatgatctgaaatg 111  Q
    |||||||| |||||||||||||||||||||||||||    
T  11093743 ttcaattgtggagcttgcatttcatgatctgaaatg 11093708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 44014717 - 44014816
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    ||||||||||  ||||||| || ||||||  | ||||| |||||||||||||| ||||| | |  ||||||||||| |||||||  |||| |||||||||    
T  44014717 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcataagttgt 44014816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 45541722 - 45541603
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgt 297  Q
    |||||||||| |||||||| ||||||| |  ||| ||| |||||||| ||||| |||   |||  ||||||||||| |||||||  |||| ||||| |||    
T  45541722 tgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcataagctgt 45541623  T
Q  298 tttcaacttattttcataag 317  Q
    |||||  ||||| |||||||    
T  45541622 tttcaggttattctcataag 45541603  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 25182947 - 25182989
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    |||||||||||| ||||| |||| |||||||||||||||||||    
T  25182947 acttgtgagactgtttgagagagcttatgaaaacaacttatga 25182989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 20194954 - 20195074
Alignment:
Q  200 tttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttt 299  Q
    |||||||| | |||||| | |||||||| | |||||  || |||||||||| ||||  |||| |||||||||||  ||||||  | || | |||||||||    
T  20194954 tttggattgatttatttgaacttatcttcttgcataagcagttgtgagactgtttgtgagagcttatgaaaacagtttatgacatattcaaaagttgttt 20195053  T
Q  300 tcaacttattttcataagctct 321  Q
    ||| ||| ||||||||||||||    
T  20195054 tcagctt-ttttcataagctct 20195074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 21574595 - 21574518
Alignment:
Q  244 tgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    ||||||| ||||  |||| |||||||||||||||||||  |||| ||||| || ||| | ||||||| ||||||||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctct 21574518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 275
Target Start/End: Complemental strand, 32663789 - 32663712
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaac 275  Q
    ||||||||||  ||||||| |||||||||   | || | |||||||||||||||||||| |||| ||||| |||||||    
T  32663789 tgtttggattggcttatttgagcttatctaccgacaaatacacttgtgagactatttgagagagtttatggaaacaac 32663712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 50211886 - 50211805
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttat 279  Q
    |||||||||| |||||||| |||||||||  |  ||||  ||||||| ||||| ||||| |||  |||||||||||||||||    
T  50211886 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaacttat 50211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 310
Target Start/End: Complemental strand, 1810088 - 1810016
Alignment:
Q  238 cacttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattt 310  Q
    ||||||||||||||||||| |||| ||| | |||||||||||||  |||  || ||||||||||  |||||||    
T  1810088 cacttgtgagactatttgagagagcttacggaaacaacttatgacatgtccatgagttgttttctgcttattt 1810016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 26542617 - 26542565
Alignment:
Q  269 aaacaacttatgaagtgtttataagttgttttcaacttattttcataagctct 321  Q
    |||||||||||||  ||| ||||| ||||||||||||||||| ||||| ||||    
T  26542617 aaacaacttatgatatgtctataacttgttttcaacttatttccataaactct 26542565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 34707457 - 34707525
Alignment:
Q  240 cttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttat 308  Q
    ||||||||||| ||||| |||  || |||||||||||| |||  |||  ||||||||||||||||||||    
T  34707457 cttgtgagactgtttgagagaacttttgaaaacaacttgtgacatgtccataagttgttttcaacttat 34707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 41671371 - 41671343
Alignment:
Q  288 tataagttgttttcaacttattttcataa 316  Q
    |||||||||||||||||||||||||||||    
T  41671371 tataagttgttttcaacttattttcataa 41671343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 6697 - 6614
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    |||||||||| |||||||| ||||||| | |||| |||  ||||||||||||  ||||| ||||||||||||||||| ||||||    
T  6697 tgtttggattgacttatttgagcttatatattggtataatcacttgtgagacagtttgagagagattatgaaaacaagttatga 6614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 6695 - 6612
Alignment:
Q  198 tgtttggattcacttatttaagcttatcttttggcatagacacttgtgagactatttgatagagattatgaaaacaacttatga 281  Q
    |||||||||| |||||||| ||||||| | |||| |||  ||||||||||||  ||||| ||||||||||||||||| ||||||    
T  6695 tgtttggattgacttatttgagcttatatattggtataatcacttgtgagacagtttgagagagattatgaaaacaagttatga 6612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 10577 - 10654
Alignment:
Q  239 acttgtgagactatttgatagagattatgaaaacaacttatgaagtgtttataagttgttttcaacttattttcataa 316  Q
    |||||||||||| ||||| | || ||||| |||||||| ||||  |||  |||||||||||||| ||||||| |||||    
T  10577 acttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccataagttgttttcagcttatttccataa 10654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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