View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0747_low_25 (Length: 261)
Name: NF0747_low_25
Description: NF0747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0747_low_25 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 28 - 261
Target Start/End: Original strand, 25120608 - 25120838
Alignment:
| Q |
28 |
cacaatatggttgaggtaattcaaacttagaaccaaacgcacaataaaaattaacattgagtacaatatacataagtacacaaatgccattatgaagagg |
127 |
Q |
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| T |
25120608 |
cacaatatggtggagggaattcaaacatagaaccaaacgcacaataaaaatcaacattgagtacaacatacataagtacacaaatgccattatgaagagg |
25120707 |
T |
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| Q |
128 |
atcctaannnnnnnttcaacaatctttaacattaatataaaccctta-aagaaatgctacatataaaaattactatctctgaattacaaataaacttctt |
226 |
Q |
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|||||| ||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||| ||| |||||||| | | ||| ||||| |
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| T |
25120708 |
atccta--ccccccttcaacaatctttaacattaatataaacccttacacgaaatgctgcatataaacattac-atccctgaattataga-aaaattctt |
25120803 |
T |
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| Q |
227 |
gaaataattatcatgacaaatgtaagaagctaaaa |
261 |
Q |
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|| ||||||||||| |||||||||||||||||||| |
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| T |
25120804 |
gacataattatcataacaaatgtaagaagctaaaa |
25120838 |
T |
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