View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0747_low_28 (Length: 251)
Name: NF0747_low_28
Description: NF0747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0747_low_28 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 124 - 251
Target Start/End: Original strand, 11759010 - 11759132
Alignment:
| Q |
124 |
cattgttcaattgctttgatatggttttgttaattaagacattgaaacagtgacatggttggaaatggaatggagaattgaaacagagttaggctttgcg |
223 |
Q |
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| T |
11759010 |
cattgtttaattgctttgatatggttttgttaattaagaaattgaaacagtgacatggttgga-----aatggagaattgaaacagagttaggctttgcg |
11759104 |
T |
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| Q |
224 |
tttgaatgtcgttgttatttttatttat |
251 |
Q |
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||||||||| || ||||||||||||||| |
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| T |
11759105 |
tttgaatgtagtagttatttttatttat |
11759132 |
T |
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