View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0747_low_33 (Length: 231)
Name: NF0747_low_33
Description: NF0747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0747_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 30128403 - 30128252
Alignment:
| Q |
5 |
taagaaaaaccagaacagaatctggagcaaacaacagaagaagcgcagacatttgagggataatggggcacacactacctcaagagacaatattcgggat |
104 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30128403 |
taagaaaaaccagaacagaatctggagcaaacaacagaagaagcgcagacatttgagggataatggggcacacactacctcaagagacaatattcgggat |
30128304 |
T |
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| Q |
105 |
cccagcacaaaattttcatcactatatactttattttgtgttcatctcactc |
156 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| | |||||| |
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| T |
30128303 |
cccagcacaaaattttcatcactatatactttattttgtgttcttttcactc |
30128252 |
T |
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