View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0747_low_37 (Length: 208)
Name: NF0747_low_37
Description: NF0747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0747_low_37 |
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Alignment Details
Target: chr5 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37073485 - 37073613
Alignment:
| Q |
1 |
ttgcattaataatataacaaagattgctggaagnnnnnnnnnnttaataaagatatacacacgcttttctaaacacataaaatataatccaatatacaat |
100 |
Q |
| |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37073485 |
ttgcattaataatataacaaagattgctggaa--aaaaaaaaattaataaagatatacacacgcttttctaaacacataaaatataatccaatatacaat |
37073582 |
T |
|
| Q |
101 |
agtttagaggaaaaatgagtataatctaccc |
131 |
Q |
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|||||||||||||||||||||||||| |||| |
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| T |
37073583 |
agtttagaggaaaaatgagtataatcaaccc |
37073613 |
T |
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