View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0748_high_13 (Length: 297)
Name: NF0748_high_13
Description: NF0748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0748_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 46388178 - 46388372
Alignment:
| Q |
5 |
cttaatgttttgtacaattaactatctgaggtccaagttgaccataaatattattattgaaaaggtcaacagagactgcacgatgggtggcatacgacac |
104 |
Q |
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| T |
46388178 |
cttaatgttttgtacaattaactatctgaggtccaagttgaccataaatattattattgaaaaggtcaacagagactacacgatgggtggcatacgacac |
46388277 |
T |
|
| Q |
105 |
acttccatgaacatggtgtggagtgagaatgaatttatgtagagtttatgggaggaggagccgatgtccaatgcctggtgaatgacatgagtgct |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
46388278 |
acttccatgaacatggtgtggagtgagaatgaatttatgtagagtttatgggaggaggagccgatgtccagtgcctggtgaatgacatgagtgct |
46388372 |
T |
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