View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0749_high_15 (Length: 321)

Name: NF0749_high_15
Description: NF0749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0749_high_15
NF0749_high_15
[»] chr1 (26 HSPs)
chr1 (103-311)||(20031713-20031916)
chr1 (97-196)||(11945372-11945472)
chr1 (51-125)||(11945093-11945167)
chr1 (51-125)||(43630898-43630972)
chr1 (97-194)||(29534399-29534496)
chr1 (62-128)||(636473-636539)
chr1 (97-179)||(43630415-43630498)
chr1 (51-121)||(11809859-11809929)
chr1 (104-179)||(25263124-25263200)
chr1 (67-125)||(20032127-20032185)
chr1 (97-179)||(11809532-11809615)
chr1 (97-179)||(27653513-27653596)
chr1 (97-179)||(46198623-46198706)
chr1 (103-179)||(23072925-23073002)
chr1 (97-179)||(29764562-29764645)
chr1 (98-175)||(636160-636238)
chr1 (97-178)||(10492081-10492163)
chr1 (103-179)||(50000525-50000602)
chr1 (107-179)||(51326548-51326621)
chr1 (97-130)||(12271335-12271368)
chr1 (97-130)||(29534363-29534396)
chr1 (101-129)||(11809714-11809742)
chr1 (100-128)||(11809748-11809776)
chr1 (100-128)||(11945211-11945239)
chr1 (101-129)||(20031955-20031983)
chr1 (100-128)||(20032055-20032083)
[»] chr3 (46 HSPs)
chr3 (103-311)||(14647775-14647978)
chr3 (103-311)||(16325362-16325566)
chr3 (103-311)||(2248773-2248977)
chr3 (100-311)||(13436135-13436342)
chr3 (103-311)||(41554-41758)
chr3 (101-311)||(16839729-16839935)
chr3 (97-196)||(8928600-8928699)
chr3 (51-125)||(45220868-45220942)
chr3 (51-125)||(5841265-5841339)
chr3 (97-196)||(13520706-13520806)
chr3 (62-126)||(41244-41308)
chr3 (51-121)||(2249126-2249196)
chr3 (97-196)||(34852827-34852930)
chr3 (62-126)||(16325946-16326010)
chr3 (97-179)||(17691999-17692082)
chr3 (103-179)||(45220448-45220525)
chr3 (97-196)||(13523336-13523436)
chr3 (51-130)||(16840104-16840183)
chr3 (97-179)||(52466497-52466580)
chr3 (97-179)||(52990003-52990086)
chr3 (67-125)||(14648222-14648280)
chr3 (97-179)||(21837171-21837254)
chr3 (97-179)||(24513697-24513780)
chr3 (98-179)||(5841714-5841796)
chr3 (98-179)||(24178803-24178885)
chr3 (98-179)||(35961812-35961894)
chr3 (97-179)||(11914297-11914380)
chr3 (97-179)||(14965925-14966008)
chr3 (97-179)||(22651900-22651983)
chr3 (97-179)||(54876681-54876764)
chr3 (139-196)||(11912759-11912816)
chr3 (103-179)||(17685810-17685887)
chr3 (66-126)||(13435967-13436027)
chr3 (104-177)||(3265173-3265247)
chr3 (66-126)||(8928737-8928797)
chr3 (215-308)||(34852719-34852813)
chr3 (215-282)||(11912830-11912898)
chr3 (215-305)||(8928495-8928586)
chr3 (98-128)||(16840005-16840035)
chr3 (100-129)||(2249049-2249078)
chr3 (97-130)||(34852966-34852999)
chr3 (97-177)||(36527625-36527706)
chr3 (100-128)||(5841383-5841411)
chr3 (101-129)||(14648017-14648045)
chr3 (100-128)||(14648150-14648178)
chr3 (100-128)||(45220599-45220627)
[»] chr6 (41 HSPs)
chr6 (103-311)||(14594297-14594500)
chr6 (103-311)||(7429700-7429903)
chr6 (103-311)||(23955889-23956093)
chr6 (101-311)||(9622470-9622675)
chr6 (101-196)||(34297226-34297321)
chr6 (97-308)||(29416967-29417174)
chr6 (51-125)||(28707958-28708032)
chr6 (98-184)||(25738232-25738318)
chr6 (62-126)||(23955479-23955543)
chr6 (97-179)||(17378078-17378161)
chr6 (97-176)||(18927655-18927735)
chr6 (51-127)||(34297676-34297752)
chr6 (70-125)||(7429499-7429554)
chr6 (51-121)||(9622823-9622893)
chr6 (97-182)||(16885503-16885588)
chr6 (98-179)||(28708407-28708489)
chr6 (67-124)||(14594614-14594671)
chr6 (51-127)||(25737991-25738067)
chr6 (97-175)||(28104184-28104263)
chr6 (103-184)||(15817890-15817970)
chr6 (97-179)||(18913701-18913784)
chr6 (97-179)||(18936959-18937042)
chr6 (97-179)||(15687943-15688024)
chr6 (215-311)||(25738345-25738442)
chr6 (103-179)||(15875148-15875223)
chr6 (97-179)||(15174379-15174462)
chr6 (97-128)||(25738168-25738199)
chr6 (98-129)||(34297326-34297357)
chr6 (98-129)||(34297397-34297428)
chr6 (98-129)||(34297502-34297533)
chr6 (98-129)||(34297571-34297602)
chr6 (97-130)||(15817976-15818009)
chr6 (97-130)||(16885588-16885621)
chr6 (97-130)||(16885723-16885756)
chr6 (215-256)||(34297171-34297212)
chr6 (100-128)||(7429598-7429626)
chr6 (100-128)||(9622747-9622775)
chr6 (100-128)||(14594541-14594569)
chr6 (98-130)||(18927493-18927525)
chr6 (98-130)||(28104328-28104360)
chr6 (100-128)||(28708076-28708104)
[»] chr5 (25 HSPs)
chr5 (103-311)||(43243330-43243533)
chr5 (101-311)||(33473385-33473591)
chr5 (97-196)||(36459966-36460065)
chr5 (97-308)||(23538279-23538486)
chr5 (51-125)||(19075988-19076062)
chr5 (97-308)||(10816253-10816460)
chr5 (51-125)||(31253116-31253190)
chr5 (103-179)||(19076272-19076349)
chr5 (62-126)||(33473836-33473900)
chr5 (51-127)||(36459647-36459723)
chr5 (67-125)||(43243711-43243769)
chr5 (103-179)||(262910-262987)
chr5 (97-179)||(17010770-17010853)
chr5 (97-179)||(29447760-29447843)
chr5 (97-179)||(41861618-41861701)
chr5 (215-282)||(36460079-36460147)
chr5 (97-151)||(6765632-6765687)
chr5 (98-129)||(36459796-36459827)
chr5 (96-130)||(6765550-6765584)
chr5 (97-130)||(10816217-10816250)
chr5 (100-128)||(19076106-19076134)
chr5 (98-130)||(24212200-24212232)
chr5 (100-128)||(31253044-31253072)
chr5 (101-129)||(43243572-43243600)
chr5 (100-128)||(43243639-43243667)
[»] chr7 (56 HSPs)
chr7 (101-311)||(29003845-29004051)
chr7 (101-311)||(34957195-34957401)
chr7 (101-311)||(13892449-13892655)
chr7 (101-196)||(15213499-15213594)
chr7 (51-125)||(11394784-11394858)
chr7 (97-194)||(833533-833630)
chr7 (97-194)||(837529-837626)
chr7 (97-194)||(1198713-1198810)
chr7 (97-194)||(1202709-1202806)
chr7 (51-121)||(16185623-16185693)
chr7 (62-126)||(41283755-41283819)
chr7 (97-196)||(14416427-14416526)
chr7 (97-179)||(46580956-46581039)
chr7 (51-127)||(15213147-15213223)
chr7 (97-179)||(14981716-14981799)
chr7 (97-179)||(16998339-16998422)
chr7 (97-177)||(14157262-14157343)
chr7 (97-179)||(11092603-11092686)
chr7 (98-176)||(11394330-11394409)
chr7 (97-179)||(14273261-14273344)
chr7 (97-179)||(16185836-16185919)
chr7 (98-179)||(15719743-15719825)
chr7 (103-178)||(41284064-41284140)
chr7 (97-175)||(11084861-11084940)
chr7 (215-308)||(833423-833517)
chr7 (215-308)||(1198603-1198697)
chr7 (105-179)||(32161124-32161197)
chr7 (97-169)||(37793713-37793786)
chr7 (97-129)||(15213397-15213429)
chr7 (215-282)||(15213608-15213676)
chr7 (97-133)||(16998293-16998329)
chr7 (98-129)||(15213328-15213359)
chr7 (98-128)||(16251545-16251575)
chr7 (98-128)||(16251742-16251772)
chr7 (98-128)||(16251808-16251838)
chr7 (98-128)||(34957122-34957152)
chr7 (215-299)||(837428-837513)
chr7 (215-299)||(1202608-1202693)
chr7 (97-172)||(1490352-1490429)
chr7 (97-130)||(1490429-1490462)
chr7 (97-130)||(10501831-10501864)
chr7 (97-130)||(15112724-15112757)
chr7 (97-130)||(15116231-15116264)
chr7 (97-130)||(15116264-15116297)
chr7 (97-130)||(16551077-16551110)
chr7 (97-130)||(16614552-16614585)
chr7 (90-130)||(833633-833673)
chr7 (90-130)||(1198813-1198853)
chr7 (98-130)||(11092539-11092571)
chr7 (100-128)||(11394712-11394740)
chr7 (100-128)||(16185741-16185769)
chr7 (101-129)||(16251675-16251703)
chr7 (101-129)||(16251774-16251802)
chr7 (98-126)||(29003776-29003804)
chr7 (97-129)||(34957088-34957120)
chr7 (98-126)||(34957159-34957187)
[»] chr8 (52 HSPs)
chr8 (98-311)||(16197728-16197937)
chr8 (103-311)||(11774749-11774953)
chr8 (98-311)||(22005349-22005559)
chr8 (101-311)||(8414531-8414737)
chr8 (103-311)||(44493746-44493950)
chr8 (101-311)||(11251711-11251917)
chr8 (98-311)||(21980352-21980562)
chr8 (98-311)||(22000371-22000580)
chr8 (98-311)||(21328880-21329089)
chr8 (98-310)||(21985336-21985545)
chr8 (103-311)||(34950403-34950607)
chr8 (101-196)||(42560484-42560579)
chr8 (51-125)||(44494129-44494203)
chr8 (51-125)||(34950185-34950259)
chr8 (51-121)||(11251997-11252067)
chr8 (51-125)||(22009102-22009176)
chr8 (62-126)||(8414881-8414945)
chr8 (62-126)||(11774406-11774470)
chr8 (51-127)||(21967896-21967972)
chr8 (51-127)||(21980736-21980812)
chr8 (51-127)||(21985719-21985795)
chr8 (56-127)||(22000687-22000758)
chr8 (218-311)||(21967627-21967721)
chr8 (97-179)||(14103283-14103366)
chr8 (97-183)||(22352698-22352785)
chr8 (51-129)||(21328665-21328743)
chr8 (51-127)||(42560785-42560861)
chr8 (97-179)||(23409552-23409635)
chr8 (105-179)||(12576884-12576959)
chr8 (97-171)||(18024679-18024753)
chr8 (103-179)||(23478133-23478208)
chr8 (215-282)||(42560402-42560470)
chr8 (97-179)||(22238299-22238381)
chr8 (103-179)||(19879879-19879956)
chr8 (97-155)||(17461346-17461405)
chr8 (159-194)||(21967740-21967775)
chr8 (97-128)||(21967860-21967891)
chr8 (97-128)||(21980700-21980731)
chr8 (97-128)||(21985683-21985714)
chr8 (97-128)||(22000651-22000682)
chr8 (97-128)||(22009064-22009095)
chr8 (98-128)||(16197694-16197724)
chr8 (98-128)||(21328745-21328775)
chr8 (98-128)||(21328813-21328843)
chr8 (97-130)||(18024753-18024786)
chr8 (98-127)||(21328779-21328808)
chr8 (101-129)||(16197664-16197692)
chr8 (97-129)||(19879614-19879646)
chr8 (100-128)||(21980599-21980627)
chr8 (100-128)||(21985582-21985610)
chr8 (98-130)||(23409422-23409454)
chr8 (97-129)||(42560617-42560649)
[»] scaffold0001 (12 HSPs)
scaffold0001 (103-311)||(175819-176023)
scaffold0001 (103-311)||(168465-168669)
scaffold0001 (98-311)||(153033-153242)
scaffold0001 (101-311)||(163158-163363)
scaffold0001 (62-126)||(175476-175540)
scaffold0001 (51-129)||(163501-163579)
scaffold0001 (66-126)||(153682-153742)
scaffold0001 (98-128)||(153282-153312)
scaffold0001 (98-128)||(153348-153378)
scaffold0001 (101-129)||(153314-153342)
scaffold0001 (101-129)||(153480-153508)
scaffold0001 (101-129)||(153546-153574)
[»] chr4 (26 HSPs)
chr4 (103-311)||(28385270-28385474)
chr4 (97-308)||(4831598-4831805)
chr4 (97-308)||(4834893-4835100)
chr4 (51-125)||(37839097-37839171)
chr4 (51-125)||(42597826-42597900)
chr4 (97-182)||(30146252-30146337)
chr4 (62-126)||(28384961-28385025)
chr4 (103-179)||(37838876-37838953)
chr4 (103-179)||(42597605-42597682)
chr4 (97-176)||(9923128-9923208)
chr4 (97-176)||(11479651-11479731)
chr4 (97-179)||(15884339-15884422)
chr4 (97-179)||(26013238-26013321)
chr4 (97-178)||(15497318-15497400)
chr4 (97-179)||(14746864-14746947)
chr4 (97-179)||(40619582-40619665)
chr4 (261-311)||(40906925-40906975)
chr4 (97-130)||(4831841-4831874)
chr4 (97-130)||(4835136-4835169)
chr4 (97-130)||(30146216-30146249)
chr4 (100-129)||(37839024-37839053)
chr4 (100-129)||(42597753-42597782)
chr4 (98-130)||(9923031-9923063)
chr4 (98-130)||(11480024-11480056)
chr4 (97-129)||(15497498-15497530)
chr4 (225-308)||(30146360-30146444)
[»] scaffold0080 (4 HSPs)
scaffold0080 (97-305)||(28751-28955)
scaffold0080 (97-305)||(34216-34420)
scaffold0080 (66-126)||(28621-28681)
scaffold0080 (66-126)||(34086-34146)
[»] scaffold0301 (1 HSPs)
scaffold0301 (101-311)||(14212-14420)
[»] scaffold0098 (4 HSPs)
scaffold0098 (118-311)||(34955-35144)
scaffold0098 (142-311)||(24109-24274)
scaffold0098 (67-125)||(34123-34181)
scaffold0098 (100-128)||(34225-34253)
[»] scaffold0016 (4 HSPs)
scaffold0016 (98-196)||(172794-172893)
scaffold0016 (51-123)||(173133-173205)
scaffold0016 (100-128)||(172930-172958)
scaffold0016 (100-128)||(173030-173058)
[»] scaffold0815 (3 HSPs)
scaffold0815 (51-123)||(109-181)
scaffold0815 (103-179)||(362-439)
scaffold0815 (100-128)||(227-255)
[»] scaffold0066 (3 HSPs)
scaffold0066 (97-308)||(48178-48385)
scaffold0066 (97-130)||(48109-48142)
scaffold0066 (97-126)||(48145-48174)
[»] chr2 (22 HSPs)
chr2 (97-308)||(22702949-22703156)
chr2 (62-125)||(37379146-37379209)
chr2 (103-179)||(37379353-37379430)
chr2 (97-179)||(21914667-21914750)
chr2 (97-179)||(24316375-24316458)
chr2 (97-179)||(24681173-24681256)
chr2 (97-179)||(34492416-34492499)
chr2 (97-179)||(34874493-34874576)
chr2 (98-179)||(13101802-13101884)
chr2 (103-179)||(24670758-24670835)
chr2 (96-179)||(23707569-23707653)
chr2 (97-179)||(24917867-24917950)
chr2 (97-179)||(27472176-27472259)
chr2 (97-178)||(22459844-22459926)
chr2 (97-184)||(18359108-18359196)
chr2 (97-180)||(21082016-21082100)
chr2 (90-130)||(22702873-22702913)
chr2 (97-130)||(18359196-18359229)
chr2 (103-179)||(27485413-27485490)
chr2 (97-126)||(22702916-22702945)
chr2 (100-129)||(37379253-37379282)
chr2 (98-130)||(34874641-34874673)
[»] scaffold0679 (3 HSPs)
scaffold0679 (51-125)||(3171-3245)
scaffold0679 (98-179)||(2714-2796)
scaffold0679 (100-128)||(3099-3127)
[»] scaffold0021 (3 HSPs)
scaffold0021 (97-184)||(146036-146123)
scaffold0021 (215-308)||(146149-146243)
scaffold0021 (97-130)||(145967-146000)
[»] scaffold0175 (1 HSPs)
scaffold0175 (111-196)||(17918-18004)
[»] scaffold0015 (5 HSPs)
scaffold0015 (65-127)||(208655-208717)
scaffold0015 (218-311)||(208892-208986)
scaffold0015 (97-128)||(208722-208753)
scaffold0015 (159-194)||(208838-208873)
scaffold0015 (100-128)||(208759-208787)
[»] scaffold0436 (1 HSPs)
scaffold0436 (97-179)||(7913-7996)
[»] scaffold0434 (1 HSPs)
scaffold0434 (97-179)||(7222-7305)
[»] scaffold0356 (1 HSPs)
scaffold0356 (97-179)||(720-803)
[»] scaffold0317 (1 HSPs)
scaffold0317 (97-179)||(7183-7266)
[»] scaffold0022 (1 HSPs)
scaffold0022 (97-179)||(54119-54202)
[»] scaffold0076 (1 HSPs)
scaffold0076 (97-178)||(24877-24958)
[»] scaffold0802 (1 HSPs)
scaffold0802 (97-176)||(5697-5777)
[»] scaffold0877 (2 HSPs)
scaffold0877 (97-179)||(3004-3087)
scaffold0877 (98-130)||(3087-3119)
[»] scaffold0032 (1 HSPs)
scaffold0032 (97-179)||(67018-67101)
[»] scaffold0025 (1 HSPs)
scaffold0025 (97-179)||(78160-78243)
[»] scaffold0020 (1 HSPs)
scaffold0020 (97-179)||(170030-170113)
[»] scaffold0019 (1 HSPs)
scaffold0019 (97-179)||(21708-21791)
[»] scaffold2015 (1 HSPs)
scaffold2015 (67-125)||(391-449)
[»] scaffold0577 (1 HSPs)
scaffold0577 (106-179)||(7698-7772)
[»] scaffold0014 (2 HSPs)
scaffold0014 (97-177)||(126784-126865)
scaffold0014 (97-179)||(77742-77827)
[»] scaffold0599 (4 HSPs)
scaffold0599 (139-196)||(35-92)
scaffold0599 (139-196)||(4453-4510)
scaffold0599 (215-282)||(106-174)
scaffold0599 (215-282)||(4524-4592)
[»] scaffold0057 (1 HSPs)
scaffold0057 (103-179)||(70745-70822)
[»] scaffold1783 (1 HSPs)
scaffold1783 (103-184)||(129-209)
[»] scaffold0515 (1 HSPs)
scaffold0515 (103-175)||(4082-4155)
[»] scaffold0306 (1 HSPs)
scaffold0306 (103-175)||(4082-4155)
[»] scaffold0335 (1 HSPs)
scaffold0335 (103-177)||(642-717)
[»] scaffold0247 (1 HSPs)
scaffold0247 (125-179)||(1-56)
[»] scaffold0156 (1 HSPs)
scaffold0156 (103-155)||(15515-15568)
[»] scaffold0462 (1 HSPs)
scaffold0462 (106-179)||(10274-10349)
[»] scaffold0004 (1 HSPs)
scaffold0004 (104-178)||(362661-362736)
[»] scaffold0123 (1 HSPs)
scaffold0123 (97-130)||(321-354)
[»] scaffold0046 (1 HSPs)
scaffold0046 (97-130)||(22812-22845)
[»] scaffold0780 (1 HSPs)
scaffold0780 (97-129)||(3724-3756)
[»] scaffold0037 (1 HSPs)
scaffold0037 (97-129)||(69056-69088)
[»] scaffold0009 (1 HSPs)
scaffold0009 (97-129)||(159080-159112)


Alignment Details
Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 103 - 311
Target Start/End: Complemental strand, 20031916 - 20031713
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcca 202  Q
    |||||||||||||||||||||||||||| || |||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||| |   | |    
T  20031916 gtaagagtacaccacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactacgacttcaacaacaacaccaacgatgataacaac-a 20031818  T
Q  203 tct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatcc 301  Q
    ||  || |     |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20031817 tcgacaat-----ttgcataacttacttatgactcattcggcaacgtacaacccagcacgcttacaatttaaaccaacattcacatcttaattaagatcc 20031723  T
Q  302 aacagcaaca 311  Q
    ||||||||||    
T  20031722 aacagcaaca 20031713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 11945372 - 11945472
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatg 195  Q
    ||||| ||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11945372 aacaacgtaagagtacatcacctcttataaaacatctgaacataaacaatcaccaacaacagctacaactacgacttcaacaacaacaccaacgatgatg 11945471  T
Q  196 a 196  Q
    |    
T  11945472 a 11945472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 11945093 - 11945167
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11945093 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 11945167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 43630972 - 43630898
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43630972 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 43630898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 29534399 - 29534496
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgat 194  Q
    |||||||||||||||||| |||||||| | |||||||||||||| || |||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  29534399 aacaaagtaagagtacactacctcttacacaacacctgacataatcattcaccaacaatggctacaactacgacttcaacaacaacacggacgatgat 29534496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 636539 - 636473
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  636539 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttagaaaa 636473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 43630498 - 43630415
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||| |||||||||||||||||||    
T  43630498 aacaacgtaagagtacaccacctcttataaaacacctaaacataaacaatcaccaataacagcttcaactacgacttcaacaac 43630415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 11809929 - 11809859
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctct 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  11809929 caacactatagatgatcatcataacctcgtcatactcatcaacataaccaacgtaagagtataccacctct 11809859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 25263200 - 25263124
Alignment:
Q  104 taagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  25263200 taagagtacaccacctcttacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 25263124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 20032185 - 20032127
Alignment:
Q  67 catcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  20032185 catcataacctcatcatactcatcaacataaacaacgtaagagtacaccacctcttata 20032127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 11809615 - 11809532
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||| | ||||||||||| ||| |||||||||||||||||||    
T  11809615 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaatagtcaccaacaacagcttcaactacgacttcaacaac 11809532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 27653596 - 27653513
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| ||||||| ||| |||||||| |||||||||||  || |||||||||||||||||||    
T  27653596 aacaacgtaagagtacaccacctcttacaaaacacttgaacataaacagtcaccaacaacatcttcaactacgacttcaacaac 27653513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 46198706 - 46198623
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| |||||||||||||||||||||||||||| | | ||||||||| |||| |||||| ||| |||||||||||||||||||    
T  46198706 aacaacgtaagagtacaccacctcttataaaacatcagaacataaacagtcactaacaacagcttcaactacgacttcaacaac 46198623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 23072925 - 23073002
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||||||||||  | |||||| |||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  23072925 gtaagagtacaccacctcccacaaaacatctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 23073002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 29764645 - 29764562
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||  | |||| | |||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  29764645 aacaacgtaagagtacaccacctcccacaaaatatctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 29764562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 636238 - 636160
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaa 175  Q
    |||| ||||||||||||||||||| | ||||||||| | |||||||| ||||| ||||| ||| |||||||||||||||    
T  636238 acaacgtaagagtacaccacctctcacaaaacacctaaacataaacagtcaccgacaacagcttcaactacgacttcaa 636160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 10492163 - 10492081
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaa 178  Q
    ||||| ||||||||||| ||||||| | ||||||||||| |||| ||| ||||||| ||| ||| ||||||||||||||||||    
T  10492163 aacaacgtaagagtacatcacctctcacaaaacacctgaacatagacagtcaccaataacagcttcaactacgacttcaacaa 10492081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 50000525 - 50000602
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||||||| |||| ||| ||||||||||| |||||||| ||| ||| ||| ||| |||||||||||||||||||    
T  50000525 gtaagagtacacaaccttttacaaaacacctgaacataaacagtcatcaataacagcttcaactacgacttcaacaac 50000602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 51326548 - 51326621
Alignment:
Q  107 gagtacaccacctcttataaaacacct-gacataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||||||||  || ||||||| |||||||||||    
T  51326548 gagtacaccacctctcacaaaacacctagacataaacagtcaccaacaacaacttcaactacaacttcaacaac 51326621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 12271335 - 12271368
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  12271335 aacaacgtaagagtacaccacctcttataaaaca 12271368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 29534363 - 29534396
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  29534363 aacaacgtaagagtacaccacctcttataaaaca 29534396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 11809742 - 11809714
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  11809742 aagtaagagtacaccacctcttataaaac 11809714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 11809776 - 11809748
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  11809776 aaagtaagagtacaccacctcttataaaa 11809748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 11945211 - 11945239
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  11945211 aaagtaagagtacaccacctcttataaaa 11945239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 20031983 - 20031955
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  20031983 aagtaagagtacaccacctcttataaaac 20031955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 20032083 - 20032055
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  20032083 aaagtaagagtacaccacctcttataaaa 20032055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 103 - 311
Target Start/End: Complemental strand, 14647978 - 14647775
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcca 202  Q
    |||||||||||||||||||||||||||| || |||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||| |   | |    
T  14647978 gtaagagtacaccacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactactacttcaacaacaacaccaacgatgataacaac-a 14647880  T
Q  203 tct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatcc 301  Q
    ||  || |     |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14647879 tcgacaat-----ttgcataacttacttatgactcattcggcaacgtacaacccagcacgcttacaatttaaaccaacattcacatcttaattaagatcc 14647785  T
Q  302 aacagcaaca 311  Q
    ||||||||||    
T  14647784 aacagcaaca 14647775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 103 - 311
Target Start/End: Complemental strand, 16325566 - 16325362
Alignment:
Q  103 gtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    ||||||||||||||||||||||| ||||| || || | | |||||||||||||||| |||||||||||||||||||||||||||||||||||| |   |     
T  16325566 gtaagagtacaccacctcttatagaaacatctaacctgatcaatcaccaacaacggatacaactacgacttcaacaacaacaccaacgatgataacaac- 16325468  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  16325467 atcgacaat-----ttgcataatttacttatgactcattcggcaacgtacaacccagcacgcttacaatttaaatcaacattcacatcttaattaagatc 16325373  T
Q  301 caacagcaaca 311  Q
    |||||||||||    
T  16325372 caacagcaaca 16325362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 103 - 311
Target Start/End: Complemental strand, 2248977 - 2248773
Alignment:
Q  103 gtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    ||||||||||||||||||||||| ||||| || || | | |||||||||||||||| |||||||||||||||||||||||||||||||||||| |   |     
T  2248977 gtaagagtacaccacctcttatagaaacatctaacctgatcaatcaccaacaacggatacaactacgacttcaacaacaacaccaacgatgataacaac- 2248879  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2248878 atcgacaat-----ttgcataacttacttatgactcattcggcaacgtacaacccagcacgcttacaatttaaaccaacattcacatcttaattaagatc 2248784  T
Q  301 caacagcaaca 311  Q
    ||||| |||||    
T  2248783 caacaacaaca 2248773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 100 - 311
Target Start/End: Original strand, 13436135 - 13436342
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||       
T  13436135 aaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacgacaccaatgatgatga--- 13436231  T
Q  200 ccatctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaag 297  Q
     ||   ||| | |   ||||||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||||| ||||||| ||||||||||||||    
T  13436232 -ca--acatcgacaatttgcataacatacttatgacttattcggcaacgtacaacccaacgacgcttacaacttaaaacaacatttacatcttaattaag 13436328  T
Q  298 atccaacagcaaca 311  Q
    || |||||||||||    
T  13436329 attcaacagcaaca 13436342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 103 - 311
Target Start/End: Original strand, 41554 - 41758
Alignment:
Q  103 gtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    |||||||||||||||||||||||||| || || || | | |||||||||||||||| |||||||||||||| ||||||||||||||||||||| |   |     
T  41554 gtaagagtacaccacctcttataaaaacatctaacctgatcaatcaccaacaacggatacaactacgactttaacaacaacaccaacgatgataacaac- 41652  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  41653 atcgacaat-----ttgcataatttacttatgactcattcggcaacgtacaacccaacacgcttacaatttaaaccaacattcacatcttaattaagatc 41747  T
Q  301 caacagcaaca 311  Q
    ||||| |||||    
T  41748 caacaacaaca 41758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 311
Target Start/End: Complemental strand, 16839935 - 16839729
Alignment:
Q  101 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtc 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||        
T  16839935 aagtaagagtacaccacctcttataaaacacctgacataaactatcaccaacaacagctacaactacgacttcaacaacaacaccaacgatgatga---- 16839840  T
Q  201 catctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaaga 298  Q
    ||   ||| | |   ||||||||  ||||||||||| ||||| |||||||||||||| | || ||||||| ||| ||||||||| |||||||||||||||    
T  16839839 ca--acatcgacaatttgcataacatacttatgacttattcgacaacgtacaacccaacaacgcttacaacttagaccaacatttacatcttaattaaga 16839742  T
Q  299 tccaacagcaaca 311  Q
    | || ||||||||    
T  16839741 ttcagcagcaaca 16839729  T

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Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 8928699 - 8928600
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  8928699 aacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacgacttcaacaacaacacggacgatgatga 8928600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 45220942 - 45220868
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45220942 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 45220868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 5841265 - 5841339
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5841265 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttata 5841339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 13520806 - 13520706
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatg 195  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||||||||||  |||||||||    
T  13520806 aacaatgtaagagtacaccacctcttacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaacaacacggacgatgatg 13520707  T
Q  196 a 196  Q
    |    
T  13520706 a 13520706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 41244 - 41308
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41244 aagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 41308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 2249196 - 2249126
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctct 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||    
T  2249196 caacactatagaagatcatcataacctcgtcatactcatcaacatagaccacgtaagagtacaccacctct 2249126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 34852930 - 34852827
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggc----tacaactacgacttcaacaacaacaccaacgatg 192  Q
    ||||||||||| ||||| ||||||||| | |||||||||||||| || ||||||||||||||    |||||||||||||||||||||||||| |||||||    
T  34852930 aacaaagtaagcgtacatcacctcttacacaacacctgacataatcattcaccaacaacggctacgtacaactacgacttcaacaacaacacgaacgatg 34852831  T
Q  193 atga 196  Q
    ||||    
T  34852830 atga 34852827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 16326010 - 16325946
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16326010 aagatcatcataacttcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 16325946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 17692082 - 17691999
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  17692082 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 17691999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 45220525 - 45220448
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||| |||||||||||||||||||    
T  45220525 gtaagagtacaccacctcttataaaacacctaaacataaacaatcaccaataacagcttcaactacgacttcaacaac 45220448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 13523436 - 13523336
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatg 195  Q
    ||||| |||||| ||||||| |||||| ||||||||||| |||||| | ||||||||||| ||| ||||||||||||||||||||||||  |||||||||    
T  13523436 aacaacgtaagaatacaccatctcttacaaaacacctgaacataaatagtcaccaacaacagcttcaactacgacttcaacaacaacacggacgatgatg 13523337  T
Q  196 a 196  Q
    |    
T  13523336 a 13523336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 16840183 - 16840104
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaaaca 130  Q
    |||||||||| |  ||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  16840183 caacactataaacaatcatcataacatcatcataatcatcaacataaacaacgtaagagtacaccacctcttataaaaca 16840104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 52466580 - 52466497
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| | | |||||||||||||||||||    
T  52466580 aacaacgtaagagtacaccacctcttacaaaacacctgaacataaacaatcaccaataacagattcaactacgacttcaacaac 52466497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 52990086 - 52990003
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  52990086 aacaatgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 52990003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 14648280 - 14648222
Alignment:
Q  67 catcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  14648280 catcataacctcatcatactcatcaacataaacaacgtaagagtacaccacctcttata 14648222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 21837171 - 21837254
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||| |||||||||||||||||| || |||||||| |||| |||||| ||| |||||||||||||||||||    
T  21837171 aacaacgtaagagtacatcacctcttataaaacaccagaacataaacagtcactaacaacagcttcaactacgacttcaacaac 21837254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 24513697 - 24513780
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||| ||| ||| ||| ||| |||||||||||||||||||    
T  24513697 aacaacgtaagagtacaccacctcttacaaaacacctgaacataaacagtcatcaataacagcttcaactacgacttcaacaac 24513780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 5841714 - 5841796
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  5841714 acaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 5841796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 24178885 - 24178803
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  24178885 acaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 24178803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 35961894 - 35961812
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||| ||||||||||||||||||| | ||||||||||| |||||| |||||||| |||| ||| |||||||||||||||||||    
T  35961894 acaacgtaagagtacaccacctctcacaaaacacctgaacataaaaaatcaccagcaacagcttcaactacgacttcaacaac 35961812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 11914380 - 11914297
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||  || ||||||||||||| |||||    
T  11914380 aacaatgtaagagtacaccacctcttacaaaacacctgaacataaacagtcaccaataacaacttcaactacgacttcgacaac 11914297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 14965925 - 14966008
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| |  |||||||||| |||||||||||||||||||  ||| || ||||||||||||||||    
T  14965925 aacaacgtaagagtacaccacctctcaccaaacacctgaacataaacaatcaccaacaatagcttcagctacgacttcaacaac 14966008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 22651900 - 22651983
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||| |||||||||||||||||| | ||||| ||| |||| |||||| ||| |||||||||||||||||||    
T  22651900 aacaacgtaagagtacatcacctcttataaaacaccagaacatatacagtcactaacaacagcttcaactacgacttcaacaac 22651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 54876764 - 54876681
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| |||||||||||||| |||| | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  54876764 aacaacgtaagagtacaccaactctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 54876681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 11912759 - 11912816
Alignment:
Q  139 aaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||| || | ||||||||||||||| |||||||||||||||||||||||||    
T  11912759 aaacaatcacccacgatggctacaactacgacatcaacaacaacaccaacgatgatga 11912816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 17685887 - 17685810
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||| ||||||| | ||||||||||| |||||| | ||||||||||| ||| |||||||||||||||||||    
T  17685887 gtaagagtacatcacctctcacaaaacacctgaacataaatagtcaccaacaacagcttcaactacgacttcaacaac 17685810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 13435967 - 13436027
Alignment:
Q  66 tcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||| |||||||| ||| |||||||||||| || |||||||||||||||||||||    
T  13435967 tcatcataacatcgtcataatcaacaacataaacaacgtgagagtacaccacctcttataa 13436027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 3265247 - 3265173
Alignment:
Q  104 taagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaaca 177  Q
    |||||||||||||||||| | |||||||||| ||||||||| ||||||| ||| ||| |||||||||||| ||||    
T  3265247 taagagtacaccacctctcacaaaacacctgaacataaacactcaccaataacagcttcaactacgactttaaca 3265173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 8928797 - 8928737
Alignment:
Q  66 tcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||| |||||||| ||| |||||||||||| || |||||||||||||||| ||||    
T  8928797 tcatcataacatcgtcataatcaacaacataaacaacgtgagagtacaccacctctcataa 8928737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 34852813 - 34852719
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaagatccaacagca 308  Q
    ||||||||  ||||||||||| ||||| ||||||||||  || | || ||||||| ||| ||||||||| |||||||| ||||||| ||||||||    
T  34852813 ttgcataacatacttatgacttattcgacaacgtacaaatcaacaacgcttacaacttagaccaacatttacatcttagttaagattcaacagca 34852719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 11912830 - 11912898
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacatt 282  Q
    ||||||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||| |||||||||    
T  11912830 ttgcataacatacttatgacttattcggcaacgtacaacccaacaacgcttacaacttataccaacatt 11912898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 305
Target Start/End: Complemental strand, 8928586 - 8928495
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaagatccaaca 305  Q
    ||||||||  ||||||||||| ||||| ||||||||||| || | || ||||||  ||| ||||||||| |||||||| ||||||| |||||    
T  8928586 ttgcataacatacttatgacttattcgacaacgtacaactcaacaacgcttacagcttagaccaacatttacatcttagttaagattcaaca 8928495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Complemental strand, 16840035 - 16840005
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  16840035 acaaagtaagagtacaccacctcttataaaa 16840005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 129
Target Start/End: Complemental strand, 2249078 - 2249049
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||    
T  2249078 aaagtaagagtacaccacctcttataaaac 2249049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 34852999 - 34852966
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  34852999 aacaacgtaagagtacaccacctcttataaaaca 34852966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 36527625 - 36527706
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaaca 177  Q
    ||||| |||||||||||| |||||| | |||||||||| ||||||||| |||| || |||  || |||||| ||||||||||    
T  36527625 aacaatgtaagagtacacaacctctcacaaaacacctgaacataaacactcacaaataacaacttcaactatgacttcaaca 36527706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 5841383 - 5841411
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  5841383 aaagtaagagtacaccacctcttataaaa 5841411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 14648045 - 14648017
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  14648045 aagtaagagtacaccacctcttataaaac 14648017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 14648178 - 14648150
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  14648178 aaagtaagagtacaccacctcttataaaa 14648150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 45220627 - 45220599
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  45220627 aaagtaagagtacaccacctcttataaaa 45220599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 8e-58; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 103 - 311
Target Start/End: Complemental strand, 14594500 - 14594297
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcca 202  Q
    ||||||||||| |||||||||||||||| || |||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||| |   | |    
T  14594500 gtaagagtacatcacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactactacttcaacaacaacaccaacgatgataacaac-a 14594402  T
Q  203 tct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatcc 301  Q
    ||  || |     |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14594401 tcgacaat-----ttgcataacttacttatgactcattcggcaacgtacaacccagcacgcttacaatttaaaccaacattcacatcttaattaagatcc 14594307  T
Q  302 aacagcaaca 311  Q
    ||||||||||    
T  14594306 aacagcaaca 14594297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 103 - 311
Target Start/End: Original strand, 7429700 - 7429903
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcca 202  Q
    |||||||||||||||||||||||||||| || |||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||| |   | |    
T  7429700 gtaagagtacaccacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactactacttcaacaacaacaccaacgatgataacaac-a 7429798  T
Q  203 tctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatcca 302  Q
    ||  |       |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  7429799 tcgaaaat----ttgcataacttacttatgactcattcggcaacgtacaacccagcacgcttacaatttaaactaacattcacatcttaattaagatcca 7429894  T
Q  303 acagcaaca 311  Q
    |||||||||    
T  7429895 acagcaaca 7429903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 103 - 311
Target Start/End: Original strand, 23955889 - 23956093
Alignment:
Q  103 gtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    ||||||||||||||||||||||| ||||| || |||| | |||||| ||||||| | ||||||||| |||||||||||||||||||||||||| |   |     
T  23955889 gtaagagtacaccacctcttatagaaacatctaacatgatcaatcatcaacaacagatacaactacaacttcaacaacaacaccaacgatgataacaac- 23955987  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23955988 atcgacaat-----ttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 23956082  T
Q  301 caacagcaaca 311  Q
    |||||||||||    
T  23956083 caacagcaaca 23956093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 101 - 311
Target Start/End: Complemental strand, 9622675 - 9622470
Alignment:
Q  101 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtc 200  Q
    |||||||||||||||||||||||||||||| || |||| | |||||||||||||||| ||||||||||| |||||| |||| |||||||||||| |   |    
T  9622675 aagtaagagtacaccacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactacgaattcaaccacaaaaccaacgatgataacaac 9622576  T
Q  201 catct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagat 299  Q
     |||  || |     |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||    
T  9622575 -atcgacaat-----ttgcataacttacttatgactcattcggcaacgtacaacccaacacgcttacaatttagaccgacattcacatcttaattaagat 9622482  T
Q  300 ccaacagcaaca 311  Q
    ||||||||||||    
T  9622481 ccaacagcaaca 9622470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 34297321 - 34297226
Alignment:
Q  101 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  34297321 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacgatggctacaactacgacatcaacaacaacaccaacgatgatga 34297226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 308
Target Start/End: Complemental strand, 29417174 - 29416967
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||| ||||    
T  29417174 aacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacgacttcaacaacaacacggacgataatga 29417075  T
Q  197 tgtccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
       | | |||   ||   ||||||||  ||||||||||| ||||| ||||||||||| || | || ||||||| ||| ||||||||| |||||||| |||    
T  29417074 ---caacctc--ggcaatttgcataacatacttatgacttattcgacaacgtacaactcaacaacgcttacaacttagaccaacatttacatcttagtta 29416980  T
Q  296 agatccaacagca 308  Q
    |||| ||| ||||    
T  29416979 agattcaatagca 29416967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 28707958 - 28708032
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28707958 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttata 28708032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 25738232 - 25738318
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacac 184  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||    
T  25738232 acaaagtaagagtacaccacctcctacaaaacacctgacagaaacaatcaccaacaacggctacaactacgacctcaacgacaacac 25738318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 23955479 - 23955543
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23955479 aagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 23955543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 17378161 - 17378078
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||| ||||||| ||| ||| |||||||||||||||||||    
T  17378161 aacaacgtaagagtacaccacctcttacaaaacacctgaacataaacagtcaccaataacagcttcaactacgacttcaacaac 17378078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 18927655 - 18927735
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaac 176  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||    
T  18927655 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaac 18927735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 34297752 - 34297676
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    |||||||||| |  ||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  34297752 caacactataaacaatcatcataacatcgtcataatcatcaacataaacaacgtaagagtacgccacctcttataaa 34297676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 7429499 - 7429554
Alignment:
Q  70 cataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  7429499 cataacctcatcatactcatcaacataaacaacgtaagagtacaccacctcttata 7429554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 9622893 - 9622823
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctct 121  Q
    ||||| ||||||  |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  9622893 caacattatagagaatcatcataagctcgtcatactcatcaacataaaccacgtaagagtacaccacctct 9622823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 182
Target Start/End: Complemental strand, 16885588 - 16885503
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaacaac 182  Q
    ||||| ||||||||||||||||||||| ||| || |||| |||||||| ||||||||||||||||||||||| |||||| |||||||    
T  16885588 aacaacgtaagagtacaccacctcttacaaa-caactgaacataaacattcaccaacaacggctacaactacaacttcatcaacaac 16885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 28708407 - 28708489
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  28708407 acaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 28708489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 14594671 - 14594614
Alignment:
Q  67 catcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttat 124  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  14594671 catcataccctcatcatactcatcaacataaacaacgtaagagtacaccacctcttat 14594614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 25737991 - 25738067
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    |||||||||| |  |||||||||||||||||||| |||||||||||| ||| ||||||||||| || ||||||||||    
T  25737991 caacactataaacaatcatcataacctcgtcataatcatcaacataaccaacgtaagagtacatcatctcttataaa 25738067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 28104263 - 28104184
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaa 175  Q
    ||||| |||||||||||||||| || | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||    
T  28104263 aacaacgtaagagtacaccaccactcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaa 28104184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 15817970 - 15817890
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacac 184  Q
    ||||| |||||||||||||||| ||||| | ||| ||| || ||||||||||| ||| ||||||||||||||||||||||||    
T  15817970 gtaagcgtacaccacctcttatgaaacaac-gacgtaatcagtcaccaacaacagcttcaactacgacttcaacaacaacac 15817890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 18913701 - 18913784
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||| ||||||| | ||||||||||| |||||||| |||||| |||| ||| ||| |||||||||||||||    
T  18913701 aacaacgtaagagtacaacacctctcacaaaacacctgaacataaacagtcaccagcaacagcttcaagtacgacttcaacaac 18913784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 18936959 - 18937042
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||| ||||||| | ||||||||||| |||||||| |||||| |||| ||| ||| |||||||||||||||    
T  18936959 aacaacgtaagagtacaacacctctcacaaaacacctgaacataaacagtcaccagcaacagcttcaagtacgacttcaacaac 18937042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 15688024 - 15687943
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||||| |||| |  || |||||| |||||||||||  || |||||||||||||||||||    
T  15688024 aacaacgtaagagtacaccacctcttatagaacaaca-acgtaaacagtcaccaacaacaacttcaactacgacttcaacaac 15687943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 25738345 - 25738442
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagca-cacttacaatttaaaccaacattcacatcttaattaagatccaacagcaaca 311  Q
    ||||||||  ||||||||||| |||||||||||||||||  | || |  |||||| ||| ||||||||| |||||||||||||||| | |||||||||    
T  25738345 ttgcataacatacttatgacttattcggcaacgtacaactgaacaacgtttacaacttagaccaacatttacatcttaattaagattccacagcaaca 25738442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 15875148 - 15875223
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||||||| |||||||||| || |  | || |||||||||||||||||| ||| |||||||||||||||||||    
T  15875148 gtaagagtacactacctcttatagaataa-taacgtaaacaatcaccaacaacagcttcaactacgacttcaacaac 15875223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 15174462 - 15174379
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||| |||| |||  | |||||| |||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  15174462 aacaacgtaagagtataccatctcccacaaaacatctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 15174379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 128
Target Start/End: Original strand, 25738168 - 25738199
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaa 128  Q
    ||||||||||||||||||||||||||||||||    
T  25738168 aacaaagtaagagtacaccacctcttataaaa 25738199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 129
Target Start/End: Complemental strand, 34297357 - 34297326
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||||    
T  34297357 acaaagtaagagtacaccacctcttataaaac 34297326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 129
Target Start/End: Complemental strand, 34297428 - 34297397
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||||    
T  34297428 acaaagtaagagtacaccacctcttataaaac 34297397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 129
Target Start/End: Complemental strand, 34297533 - 34297502
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||||    
T  34297533 acaaagtaagagtacaccacctcttataaaac 34297502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 129
Target Start/End: Complemental strand, 34297602 - 34297571
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||||    
T  34297602 acaaagtaagagtacaccacctcttataaaac 34297571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 15818009 - 15817976
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  15818009 aacaacgtaagagtacaccacctcttataaaaca 15817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 16885621 - 16885588
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  16885621 aacaacgtaagagtacaccacctcttataaaaca 16885588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 16885756 - 16885723
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  16885756 aacaatgtaagagtacaccacctcttataaaaca 16885723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 34297212 - 34297171
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaaccca 256  Q
    ||||||||  ||||||||||| ||||||||||||||||||||    
T  34297212 ttgcataacatacttatgacttattcggcaacgtacaaccca 34297171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 7429598 - 7429626
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  7429598 aaagtaagagtacaccacctcttataaaa 7429626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 9622775 - 9622747
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  9622775 aaagtaagagtacaccacctcttataaaa 9622747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 14594569 - 14594541
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  14594569 aaagtaagagtacaccacctcttataaaa 14594541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 18927493 - 18927525
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaaca 130  Q
    |||| ||||||||||||||||||||||||||||    
T  18927493 acaacgtaagagtacaccacctcttataaaaca 18927525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 28104360 - 28104328
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaaca 130  Q
    |||| ||||||||||||||||||||||||||||    
T  28104360 acaacgtaagagtacaccacctcttataaaaca 28104328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 28708076 - 28708104
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  28708076 aaagtaagagtacaccacctcttataaaa 28708104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 8e-58; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 103 - 311
Target Start/End: Complemental strand, 43243533 - 43243330
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcca 202  Q
    |||||||||||||||||||||||||||| || |||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||| |   | |    
T  43243533 gtaagagtacaccacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactactacttcaacaacaacaccaacgatgataacaac-a 43243435  T
Q  203 tct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatcc 301  Q
    ||  || |     |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  43243434 tcgacaat-----ttgcataacttacttatgactcattcggcaacgtacaacccagcacgcttacaatttaaaccaacattcacatcttaagtaagatcc 43243340  T
Q  302 aacagcaaca 311  Q
    ||||||||||    
T  43243339 aacagcaaca 43243330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 101 - 311
Target Start/End: Complemental strand, 33473591 - 33473385
Alignment:
Q  101 aagtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgt 199  Q
    ||||||||||||||||||||||||| ||||| || |||| | |||||| ||||||| | ||||||||| |||||||||||||||||||||||||| |       
T  33473591 aagtaagagtacaccacctcttatagaaacatctaacatgatcaatcatcaacaacagatacaactacaacttcaacaacaacaccaacgatgataacaa 33473492  T
Q  200 ccatct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaaga 298  Q
    | |||  || |     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33473491 c-atcgacaat-----ttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaaga 33473398  T
Q  299 tccaacagcaaca 311  Q
    |||||||||||||    
T  33473397 tccaacagcaaca 33473385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 36459966 - 36460065
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  36459966 aacaatgtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacgatggctacaactacgacatcaacaacaacaccaacgatgatga 36460065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 308
Target Start/End: Original strand, 23538279 - 23538486
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||| ||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  23538279 aacaacgtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacgacttcaacaacaacacggacgatgatga 23538378  T
Q  197 tgtccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
        ||||     ||   ||||||||  ||||||||||| ||||| ||||||||||| || | || ||||||| ||| ||||||||| |||||||| |||    
T  23538379 -caacatc----ggcaatttgcataacatacttatgacttattcgacaacgtacaactcaacaacgcttacaacttagaccaacatttacatcttagtta 23538473  T
Q  296 agatccaacagca 308  Q
    |||| ||||||||    
T  23538474 agattcaacagca 23538486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 19075988 - 19076062
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19075988 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 19076062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 308
Target Start/End: Original strand, 10816253 - 10816460
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  10816253 aacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacagctacaactacgacttcaacaacaacacggacgatgatga 10816352  T
Q  197 tgtccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
       | |||     ||   ||||||||  ||||||||||| ||||| ||||||||||| || | || ||||||| |||  |||||||| |||||||| |||    
T  10816353 caac-atcg----gcaatttgcataacatacttatgacttattcgacaacgtacaactcaacaacgcttacaacttagtccaacatttacatcttagtta 10816447  T
Q  296 agatccaacagca 308  Q
    |||| ||||||||    
T  10816448 agattcaacagca 10816460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 31253190 - 31253116
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31253190 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaggtaagagtacaccacctcttata 31253116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 19076272 - 19076349
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  19076272 gtaagagtacaccacctcttataaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 19076349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 33473900 - 33473836
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33473900 aagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 33473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 36459647 - 36459723
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    |||||||||| |  ||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  36459647 caacactataaacaatcatcataacatcgtcataatcatcaacataaacaacgtaagagtacaccacctcttataaa 36459723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 43243769 - 43243711
Alignment:
Q  67 catcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||    
T  43243769 catcataacctcatcatactcatcaacataaacaacgtaagagtaaaccacctcttata 43243711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 262910 - 262987
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||| |||||| ||| ||||||||| |||||||||    
T  262910 gtaagagtacaccacctcttataaaacaccagaacataaacagtcactaacaacagcttcaactacgaattcaacaac 262987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 17010770 - 17010853
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||  | |||||| |||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  17010770 aacaacgtaagagtacaccacctcccacaaaacatctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 17010853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 29447760 - 29447843
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | |||||||||| ||||||||| ||||||||| | ||| |||||||||||| ||||||    
T  29447760 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacatcagcttcaactacgactttaacaac 29447843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 41861701 - 41861618
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | |||||||||| ||||||||| |||||||||||  || |||||  ||||||||||||    
T  41861701 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaccttcaactctgacttcaacaac 41861618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 36460079 - 36460147
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacatt 282  Q
    ||||||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||| |||||||||    
T  36460079 ttgcataacatacttatgacttattcggcaacgtacaacccaacaacgcttacaacttataccaacatt 36460147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 6765632 - 6765687
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaa 151  Q
    ||||| ||||||||||||||||||| | |||||||||| ||||||||| |||||||    
T  6765632 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaa 6765687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 129
Target Start/End: Original strand, 36459796 - 36459827
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||||    
T  36459796 acaaagtaagagtacaccacctcttataaaac 36459827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 6765550 - 6765584
Alignment:
Q  96 aaacaaagtaagagtacaccacctcttataaaaca 130  Q
    |||||| ||||||||||||||||||||||||||||    
T  6765550 aaacaacgtaagagtacaccacctcttataaaaca 6765584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 10816217 - 10816250
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  10816217 aacaacgtaagagtacaccacctcttataaaaca 10816250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 19076106 - 19076134
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  19076106 aaagtaagagtacaccacctcttataaaa 19076134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 24212200 - 24212232
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaaca 130  Q
    |||| ||||||||||||||||||||||||||||    
T  24212200 acaatgtaagagtacaccacctcttataaaaca 24212232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 31253072 - 31253044
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  31253072 aaagtaagagtacaccacctcttataaaa 31253044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 43243600 - 43243572
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  43243600 aagtaagagtacaccacctcttataaaac 43243572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 43243667 - 43243639
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  43243667 aaagtaagagtacaccacctcttataaaa 43243639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 5e-56; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 101 - 311
Target Start/End: Original strand, 29003845 - 29004051
Alignment:
Q  101 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  29003845 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga---c 29003941  T
Q  201 catctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaagat 299  Q
     |  ||  |  |  ||||||||  ||||||||||| |||||||||||| ||||||| | || ||||||| ||||||||||||| ||||| ||||||||||    
T  29003942 aacatcgataat--ttgcataacatacttatgacttattcggcaacgttcaacccaacaacgcttacaacttaaaccaacatttacatcgtaattaagat 29004039  T
Q  300 ccaacagcaaca 311  Q
     |||||||||||    
T  29004040 tcaacagcaaca 29004051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 101 - 311
Target Start/End: Original strand, 34957195 - 34957401
Alignment:
Q  101 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||         
T  34957195 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggttacaactacgacttcaacaacaacaccaacgatgatg----g 34957290  T
Q  201 catctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaaga 298  Q
    ||   ||| | |   ||||||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||||||||||||| |||||||||||||||    
T  34957291 ca--acatcgacaatttgcataacatacttatgacttattcggcaacgtacaacccaacaacgcttacaacttaaaccaacatttacatcttaattaaga 34957388  T
Q  299 tccaacagcaaca 311  Q
    | ||||| |||||    
T  34957389 ttcaacaacaaca 34957401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 101 - 311
Target Start/End: Original strand, 13892449 - 13892655
Alignment:
Q  101 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtc 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  13892449 aagtaagagtacgccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga---- 13892544  T
Q  201 catctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaaga 298  Q
    ||   ||| | |   ||||||||  ||||||||||| |||||| ||||||||||||| | || ||||||| ||| ||||||||| ||||||||| |||||    
T  13892545 ca--acatcgacaatttgcataacatacttatgacttattcggtaacgtacaacccaacaacgcttacaacttagaccaacatttacatcttaaataaga 13892642  T
Q  299 tccaacagcaaca 311  Q
    | |||||||||||    
T  13892643 ttcaacagcaaca 13892655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 15213499 - 15213594
Alignment:
Q  101 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||||    
T  15213499 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacgatggctaccactacgacataaacaacaacaccaacgatgatga 15213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 11394858 - 11394784
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11394858 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttata 11394784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 833630 - 833533
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgat 194  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || |||||||||||  |||||||||||||||||||||||||||  ||||||||    
T  833630 aacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacaactacaactacgacttcaacaacaacacagacgatgat 833533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 837626 - 837529
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgat 194  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| || |||||||||||  |||||||||||||||||||||||||||  ||||||||    
T  837626 aacaaagtaagagtacaccacctcttacaaaacacctgccataatcattcaccaacaacaactacaactacgacttcaacaacaacacggacgatgat 837529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 1198810 - 1198713
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgat 194  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || |||||||||||  |||||||||||||||||||||||||||  ||||||||    
T  1198810 aacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacaactacaactacgacttcaacaacaacacagacgatgat 1198713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 1202806 - 1202709
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgat 194  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| || |||||||||||  |||||||||||||||||||||||||||  ||||||||    
T  1202806 aacaaagtaagagtacaccacctcttacaaaacacctgccataatcattcaccaacaacaactacaactacgacttcaacaacaacacggacgatgat 1202709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 16185623 - 16185693
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  16185623 caacactatagaagatcatcataacctcgtcatactcatcaacataaccaacgtaagagtacaccacctct 16185693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 41283755 - 41283819
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41283755 aagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 41283819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 14416526 - 14416427
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatg 195  Q
    ||||| ||||||||||||||||||||| ||| |||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||||||  |||||||||    
T  14416526 aacaacgtaagagtacaccacctcttacaaa-cacctggacataaacagtcaccaacaacagcttcaactacgacttcaacaacaacacggacgatgatg 14416428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 46581039 - 46580956
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  46581039 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 46580956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 15213147 - 15213223
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    |||||||||| |  ||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  15213147 caacactataaacaatcatcataacatcgtgataatcatcaacataaacaacgtaagagtacaccacctcttataaa 15213223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 14981799 - 14981716
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| ||||| |||||||||||||    
T  14981799 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactccgacttcaacaac 14981716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 16998339 - 16998422
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||| ||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  16998339 aacaacgtaagagtacaccacctctcacaaatcacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 16998422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 14157343 - 14157262
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaaca 177  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||| ||| ||| |||||||||||||||||    
T  14157343 aacaacgtaagagtacaccacctctcacaaaacacctgagcataaacactcaccaataacagcttcaactacgacttcaaca 14157262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 11092603 - 11092686
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | |||||||||| ||||||| | ||||||||||| ||| ||||||| |||||||||||    
T  11092603 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaatagtcaccaacaacagcttcaactacaacttcaacaac 11092686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 11394409 - 11394330
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaac 176  Q
    |||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || ||||||||||||||||    
T  11394409 acaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaac 11394330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 14273261 - 14273344
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | |||||||||| ||||||||| |||||||||||  || |||||| ||||||||||||    
T  14273261 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactaagacttcaacaac 14273344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 16185836 - 16185919
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||| | |||||||| ||||||||||| ||| ||||||||||| |||||||    
T  16185836 aacaacgtaagagtacaccacctctcacaaaacaccttaacataaacagtcaccaacaacagcttcaactacgactccaacaac 16185919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 15719743 - 15719825
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||| ||||||||||||||||||| | |||||||||| ||||||||| | ||||||||| |||  ||||||||||||||||||    
T  15719743 acaacgtaagagtacaccacctctcacaaaacacctgaacataaacagttaccaacaacagcttaaactacgacttcaacaac 15719825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 41284064 - 41284140
Alignment:
Q  103 gtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaa 178  Q
    ||||||||||| ||||||||||| ||||| || || | | |||||||||||||||| ||||||||||||||||||||    
T  41284064 gtaagagtacatcacctcttatagaaacatctaacctgatcaatcaccaacaacggatacaactacgacttcaacaa 41284140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 11084861 - 11084940
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaa 175  Q
    ||||| ||||||||||||||||||| | |||||||||| ||||||| | ||||||||||| ||| ||||||| |||||||    
T  11084861 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaatagtcaccaacaacagcttcaactacaacttcaa 11084940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 833517 - 833423
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagca-cacttacaatttaaaccaacattcacatcttaattaagatccaacagca 308  Q
    ||||||||  ||||||| ||| ||||| ||||||||||| || || | ||||||| ||||||||||||| |||||||| ||||||| | ||||||    
T  833517 ttgcataacatacttataacttattcgacaacgtacaactcaacaacgcttacaacttaaaccaacatttacatcttagttaagattcgacagca 833423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 1198697 - 1198603
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagca-cacttacaatttaaaccaacattcacatcttaattaagatccaacagca 308  Q
    ||||||||  ||||||| ||| ||||| ||||||||||| || || | ||||||| ||||||||||||| |||||||| ||||||| | ||||||    
T  1198697 ttgcataacatacttataacttattcgacaacgtacaactcaacaacgcttacaacttaaaccaacatttacatcttagttaagattcgacagca 1198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 32161197 - 32161124
Alignment:
Q  105 aagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||||||| |||||||| ||||  | || |||||| ||||||||||| ||| |||||||||||||||||||    
T  32161197 aagagtacaccatctcttatagaacaa-taacgtaaacagtcaccaacaacagcttcaactacgacttcaacaac 32161124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 37793786 - 37793713
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacga 169  Q
    ||||| ||||||||||||||||||| | ||||||  ||| |||||||| ||||||||||| ||| |||||||||    
T  37793786 aacaacgtaagagtacaccacctctcacaaaacaaatgaacataaacagtcaccaacaacagcttcaactacga 37793713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 15213397 - 15213429
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||||||    
T  15213397 aacaaagtaagagtacaccacctcttataaaac 15213429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 15213608 - 15213676
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacatt 282  Q
    ||||||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||| |||||||||    
T  15213608 ttgcataacatacttatgacttattcggcaacgtacaacccaacaacgcttacaacttataccaacatt 15213676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 16998293 - 16998329
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacct 133  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16998293 aacaacgtaagagtacaccacctcttataaaacacct 16998329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 129
Target Start/End: Original strand, 15213328 - 15213359
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||||    
T  15213328 acaaagtaagagtacaccacctcttataaaac 15213359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Complemental strand, 16251575 - 16251545
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  16251575 acaaagtaagagtacaccacctcttataaaa 16251545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Complemental strand, 16251772 - 16251742
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  16251772 acaaagtaagagtacaccacctcttataaaa 16251742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Complemental strand, 16251838 - 16251808
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  16251838 acaaagtaagagtacaccacctcttataaaa 16251808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Original strand, 34957122 - 34957152
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  34957122 acaaagtaagagtacaccacctcttataaaa 34957152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 837513 - 837428
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaagat 299  Q
    ||||||||  ||||||||||| ||||| ||||| ||||| || | || ||||||| ||| ||||||||| |||||||| |||||||    
T  837513 ttgcataacatacttatgacttattcgacaacgcacaactcaacaacgcttacaacttagaccaacatttacatcttagttaagat 837428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 1202693 - 1202608
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaagat 299  Q
    ||||||||  ||||||||||| ||||| ||||| ||||| || | || ||||||| ||| ||||||||| |||||||| |||||||    
T  1202693 ttgcataacatacttatgacttattcgacaacgcacaactcaacaacgcttacaacttagaccaacatttacatcttagttaagat 1202608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 1490429 - 1490352
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaa-cacctga-cataaacaatcaccaacaacggctacaactacgactt 172  Q
    ||||| |||||||||||||| |||| | |||| ||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  1490429 aacaacgtaagagtacaccatctctcacaaaaacacctgaacataaatagtcaccaacaacagcttcaactacgactt 1490352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 1490462 - 1490429
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  1490462 aacaacgtaagagtacaccacctcttataaaaca 1490429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 10501864 - 10501831
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  10501864 aacaacgtaagagtacaccacctcttataaaaca 10501831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 15112724 - 15112757
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  15112724 aacaacgtaagagtacaccacctcttataaaaca 15112757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 15116231 - 15116264
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  15116231 aacaacgtaagagtacaccacctcttataaaaca 15116264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 15116264 - 15116297
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  15116264 aacaacgtaagagtacaccacctcttataaaaca 15116297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 16551110 - 16551077
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  16551110 aacaacgtaagagtacaccacctcttataaaaca 16551077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 16614552 - 16614585
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  16614552 aacaacgtaagagtacaccacctcttataaaaca 16614585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 833673 - 833633
Alignment:
Q  90 caacataaacaaagtaagagtacaccacctcttataaaaca 130  Q
    |||||||||||| || |||||||||||||| ||||||||||    
T  833673 caacataaacaacgtgagagtacaccaccttttataaaaca 833633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 1198853 - 1198813
Alignment:
Q  90 caacataaacaaagtaagagtacaccacctcttataaaaca 130  Q
    |||||||||||| || |||||||||||||| ||||||||||    
T  1198853 caacataaacaacgtgagagtacaccaccttttataaaaca 1198813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 11092539 - 11092571
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaaca 130  Q
    |||| ||||||||||||||||||||||||||||    
T  11092539 acaacgtaagagtacaccacctcttataaaaca 11092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 11394740 - 11394712
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  11394740 aaagtaagagtacaccacctcttataaaa 11394712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 16185741 - 16185769
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  16185741 aaagtaagagtacaccacctcttataaaa 16185769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 16251703 - 16251675
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  16251703 aagtaagagtacaccacctcttataaaac 16251675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 16251802 - 16251774
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  16251802 aagtaagagtacaccacctcttataaaac 16251774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 29003776 - 29003804
Alignment:
Q  98 acaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||||||||||||||||||    
T  29003776 acaaagtaagagtacaccacctcttataa 29003804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 34957088 - 34957120
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaac 129  Q
    ||||| |||||||||||||||||||||||||||    
T  34957088 aacaacgtaagagtacaccacctcttataaaac 34957120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 34957159 - 34957187
Alignment:
Q  98 acaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||||||||||||||||||    
T  34957159 acaaagtaagagtacaccacctcttataa 34957187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 98 - 311
Target Start/End: Original strand, 16197728 - 16197937
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||     
T  16197728 acaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacagctacgacttcaacaacgacaccaacgatgatga- 16197826  T
Q  198 gtccatctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
       ||   ||| | |   ||||||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||||||||||||| ||||||||||||    
T  16197827 ---ca--acatcgacaatttgcataacatacttatgacttattcggcaacgtacaacccaacgacgcttacaacttaaaccaacatttacatcttaatta 16197921  T
Q  296 agatccaacagcaaca 311  Q
    |||| |||||| ||||    
T  16197922 agattcaacagaaaca 16197937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 103 - 311
Target Start/End: Original strand, 11774749 - 11774953
Alignment:
Q  103 gtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    ||||||||||||||||||||||| ||||| || |||| | |||||| ||||||| | ||||||||| |||||||||||||||||||||||||| |   |     
T  11774749 gtaagagtacaccacctcttatagaaacatctaacatgatcaatcatcaacaacagatacaactacaacttcaacaacaacaccaacgatgataacaac- 11774847  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11774848 atcgacaat-----ttgcataattttcttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 11774942  T
Q  301 caacagcaaca 311  Q
    |||||||||||    
T  11774943 caacagcaaca 11774953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 98 - 311
Target Start/End: Complemental strand, 22005559 - 22005349
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  22005559 acaaagtaagagtacaccacctcttataaaaacatctaacataaacaatcaccaacaacggatacaactacgacttcaacaacaacaccaatgatgatga 22005460  T
Q  197 tgtccatctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatt 294  Q
        ||   ||| | |   |||||||| |||||||||||| |||||||||||||||||||| | || ||||||||||| ||||||||| |||||||||||    
T  22005459 ----ca--acatcgacaatttgcataacttacttatgacttattcggcaacgtacaacccaacaacgcttacaatttagaccaacatttacatcttaatt 22005366  T
Q  295 aagatccaacagcaaca 311  Q
    |||||||||||||||||    
T  22005365 aagatccaacagcaaca 22005349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 101 - 311
Target Start/End: Complemental strand, 8414737 - 8414531
Alignment:
Q  101 aagtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgt 199  Q
    ||||||||||||||| ||||||||| ||||| || || | | ||||||| |||||||| |||||||||||||||||||||||||||||||||||| |       
T  8414737 aagtaagagtacaccccctcttatagaaacatctaacctgatcaatcactaacaacggatacaactacgacttcaacaacaacaccaacgatgataa--- 8414641  T
Q  200 ccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagat 299  Q
    | |  |||    |  |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  8414640 caacatcaacaat--ttgcataatttacttatgactcattcggcaacgtacaacccaacacgcttacaatttaaaccaacattcacatcttaattaagat 8414543  T
Q  300 ccaacagcaaca 311  Q
    |||||| |||||    
T  8414542 ccaacaacaaca 8414531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 103 - 311
Target Start/End: Complemental strand, 44493950 - 44493746
Alignment:
Q  103 gtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    ||||||||||||||||||||| |||| || ||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |   |     
T  44493950 gtaagagtacaccacctcttacaaaaacatctgacatgatcaatcaccaacaacggacacaactacgacttcaacaacaacaccaacgatgataacaac- 44493852  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||    
T  44493851 atcgacaat-----ttgcataacttacttatgactcattcggcaacgtacaacccaacacgcttacaatttagaccaacattcacatcttaattaagatc 44493757  T
Q  301 caacagcaaca 311  Q
    |||||||||||    
T  44493756 caacagcaaca 44493746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 101 - 311
Target Start/End: Complemental strand, 11251917 - 11251711
Alignment:
Q  101 aagtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgt 199  Q
    |||||||||||||||||||||||||||| || || || | | |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |       
T  11251917 aagtaagagtacaccacctcttataaaaacatctaacctgatcaatcaccaacaacggatactactacgacttcaacaacaacaccaacgatgataacaa 11251818  T
Q  200 ccatct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaaga 298  Q
    | |||  || |     |||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||    
T  11251817 c-atcgacaat-----ttgcataatttacttatgactcattcggcaacgtacaacttagcactctttcaatttaaaccaacattcacatcttaattaaga 11251724  T
Q  299 tccaacagcaaca 311  Q
    |||||||||||||    
T  11251723 tccaacagcaaca 11251711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 98 - 311
Target Start/End: Complemental strand, 21980562 - 21980352
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21980562 acaaagtaagagtacaccacctcttataaaaacatctaacataaacaatcaccaacaacggatacaactacgacttcaacaacaacaccaacgatgatga 21980463  T
Q  197 tgtccatctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatt 294  Q
        ||   ||| | |   |||||||| |||||||||||| |||||||||| ||||||||| | || ||||||||||| ||||||||| |||||||||||    
T  21980462 ----ca--acatcgacaatttgcataacttacttatgacttattcggcaacttacaacccaacaacgcttacaatttagaccaacatttacatcttaatt 21980369  T
Q  295 aagatccaacagcaaca 311  Q
    ||||||||||| |||||    
T  21980368 aagatccaacaacaaca 21980352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 98 - 311
Target Start/End: Complemental strand, 22000580 - 22000371
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  22000580 acaaagtaagagtacaccacctcttataaaaacatctaacataaacaatcaccaacaacggata-aactacgacttcaacaacaacaccaacgatgatga 22000482  T
Q  197 tgtccatctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatt 294  Q
        ||   ||| | |   |||||||| |||||||||||| |||||||||||||||||||| | || ||||||||||| ||||||||| |||||||||||    
T  22000481 ----ca--acatcgacaatttgcataacttacttatgacttattcggcaacgtacaacccaacaacgcttacaatttagaccaacatttacatcttaatt 22000388  T
Q  295 aagatccaacagcaaca 311  Q
    |||||||||||||||||    
T  22000387 aagatccaacagcaaca 22000371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 98 - 311
Target Start/End: Original strand, 21328880 - 21329089
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgat 197  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21328880 acaaagtaagagtacacaacctcttataaaatacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga- 21328978  T
Q  198 gtccatctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
       ||   ||| | |   ||||||||  ||||||| ||| ||||||||||||||| |||| | || ||||||| ||| ||||||||| ||||||||||||    
T  21328979 ---ca--acatcgacaatttgcataacatacttatcacttattcggcaacgtacatcccaacaacgcttacaacttagaccaacatttacatcttaatta 21329073  T
Q  296 agatccaacagcaaca 311  Q
    |||| |||||||||||    
T  21329074 agattcaacagcaaca 21329089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 98 - 310
Target Start/End: Complemental strand, 21985545 - 21985336
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21985545 acaaagtaagagtacaccacctcttataaaaacatctaacataaacaatcaccaacaacggatacaactacgacttcaacaacaacaccaacgatgatga 21985446  T
Q  197 tgtccatctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatt 294  Q
        ||   ||| | |   |||||||| |||||||||||| |||||||||| ||||||||| | || ||||||||||| ||||||||| |||||||||||    
T  21985445 ----ca--acatcgacaatttgcataacttacttatgacttattcggcaacttacaacccaacaacgcttacaatttagaccaacatttacatcttaatt 21985352  T
Q  295 aagatccaacagcaac 310  Q
    ||||||||| ||||||    
T  21985351 aagatccaatagcaac 21985336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 103 - 311
Target Start/End: Original strand, 34950403 - 34950607
Alignment:
Q  103 gtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    |||||||||||||||||||||||||| || || |||| | |||||||||||||||| ||||||||||| |||||||||||||||||||||||| |   |     
T  34950403 gtaagagtacaccacctcttataaaaacatctaacatgatcaatcaccaacaacggatacaactacgaattcaacaacaacaccaacgatgataacaac- 34950501  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  34950502 atcgacaat-----ttgcataacttacttatgactcatttggcaacgtacaacccagcacgcttacaatttagaccaacatccacatcttaattaagatc 34950596  T
Q  301 caacagcaaca 311  Q
    |||||||||||    
T  34950597 caacagcaaca 34950607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 42560579 - 42560484
Alignment:
Q  101 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  42560579 aagtaagagtaaaccacctcttataaaacacctgacataaacaatcaccaacgatggctacaactacgacatcaacaacaacaccaacgatgatga 42560484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 44494203 - 44494129
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44494203 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttata 44494129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 34950185 - 34950259
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34950185 caacactatataagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttata 34950259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 11252067 - 11251997
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  11252067 caacactatagaagatcatcataacctcgtcatactcatcaacataaaccacgtaagagtacaccacctct 11251997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 22009176 - 22009102
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22009176 caaccctataaaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttata 22009102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 8414945 - 8414881
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8414945 aagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 8414881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 11774406 - 11774470
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11774406 aagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 11774470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 21967972 - 21967896
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  21967972 caaccctataaaagatcatcataacctcgtcatactcatcaacataaacaatgtaagattacaccacctcttataaa 21967896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 21980812 - 21980736
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    |||| ||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21980812 caaccctataaaaaatcatcataacctcgtcatactcatcaacataaacaatgtaagagtacaccacctcttataaa 21980736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 21985795 - 21985719
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    |||| ||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21985795 caaccctataaaatatcatcataacctcgtcatactcatcaacataaacaatgtaagagtacaccacctcttataaa 21985719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 22000758 - 22000687
Alignment:
Q  56 ctatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22000758 ctataaaagatcatcataacctagtcatactcatcaacataaacaatgtaagagtacaccacctcttataaa 22000687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 311
Target Start/End: Complemental strand, 21967721 - 21967627
Alignment:
Q  218 cataatttacttatgactcattcggcaacgtacaacccagcaca-cttacaatttaaaccaacattcacatcttaattaagatccaacagcaaca 311  Q
    ||||| |||| ||||||| |||||||||||||||||||| ||   ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  21967721 cataacttacatatgacttattcggcaacgtacaacccaacaatgcttacaatttagaccaacatttacatcttaattaagatccaacagcaaca 21967627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 14103366 - 14103283
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  14103366 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 14103283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 22352698 - 22352785
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaacaaca 183  Q
    ||||| |||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  22352698 aacaacgtaagactacaccatctcttataaaacaactgaacataaacagtcaccaacaacagcttcaactacgacttcaacaacaaca 22352785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 21328665 - 21328743
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaaac 129  Q
    |||||||||| |  ||||||||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||||    
T  21328665 caacactataaacaatcatcataacatcgtcataatcatcaacataaaaaacgtaagagtacaccacctcttataaaac 21328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 42560861 - 42560785
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    |||||||||| |  ||||||||| | |||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  42560861 caacactataaacaatcatcatagcatcgtcataatcatcaacataaacaacgtaagagtacaccacctcttataaa 42560785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 23409552 - 23409635
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| ||||| |||||||||||||    
T  23409552 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactccgacttcaacaac 23409635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 12576884 - 12576959
Alignment:
Q  105 aagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || ||| |||||||||||||||    
T  12576884 aagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaattacgacttcaacaac 12576959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 18024753 - 18024679
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgact 171  Q
    ||||| ||||||||||||||||||||| ||| |||||| ||||||||| ||||||||||| ||| |||||||||||    
T  18024753 aacaacgtaagagtacaccacctcttacaaa-cacctggacataaacagtcaccaacaacagcttcaactacgact 18024679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 23478133 - 23478208
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||| ||||||||||||||||||| |  || |||||| ||||||||||| ||| |||||||| ||||||||||    
T  23478133 gtaagagtccaccacctcttataaaacaaca-acttaaacagtcaccaacaacagcttcaactacggcttcaacaac 23478208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 42560470 - 42560402
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacatt 282  Q
    ||||||||  ||||||||||| |||||||||||||||||||| | |||||||||| ||| |||||||||    
T  42560470 ttgcataacatacttatgacttattcggcaacgtacaacccaacaacacttacaacttataccaacatt 42560402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 22238381 - 22238299
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||| | | |||||||||| ||||||||| ||||| | ||| ||| |||||||||||||||||||    
T  22238381 aacaacgtaagagtacaccacctttcacaaaacacctgaacataaacagtcacc-agaacagcttcaactacgacttcaacaac 22238299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 19879879 - 19879956
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||||||||||| | |||||| ||| ||||||| | |||||||||||  || | |||||||||||||||||    
T  19879879 gtaagagtacaccacctctcacaaaacatctgaacataaatagtcaccaacaacaacttcgactacgacttcaacaac 19879956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 17461405 - 17461346
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacct-gacataaacaatcaccaacaac 155  Q
    ||||| ||||||||||| ||||||| | ||||||||| |||||||||| |||||||||||    
T  17461405 aacaacgtaagagtacatcacctctcacaaaacacctggacataaacagtcaccaacaac 17461346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 194
Target Start/End: Complemental strand, 21967775 - 21967740
Alignment:
Q  159 tacaactacgacttcaacaacaacaccaacgatgat 194  Q
    |||||||||||||||||||||||||||| |||||||    
T  21967775 tacaactacgacttcaacaacaacaccagcgatgat 21967740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 21967891 - 21967860
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaa 128  Q
    ||||||||||||||||||||||||||||||||    
T  21967891 aacaaagtaagagtacaccacctcttataaaa 21967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 21980731 - 21980700
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaa 128  Q
    ||||||||||||||||||||||||||||||||    
T  21980731 aacaaagtaagagtacaccacctcttataaaa 21980700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 21985714 - 21985683
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaa 128  Q
    ||||||||||||||||||||||||||||||||    
T  21985714 aacaaagtaagagtacaccacctcttataaaa 21985683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 22000682 - 22000651
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaa 128  Q
    ||||||||||||||||||||||||||||||||    
T  22000682 aacaaagtaagagtacaccacctcttataaaa 22000651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 22009095 - 22009064
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaa 128  Q
    ||||||||||||||||||||||||||||||||    
T  22009095 aacaaagtaagagtacaccacctcttataaaa 22009064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Original strand, 16197694 - 16197724
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  16197694 acaaagtaagagtacaccacctcttataaaa 16197724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Original strand, 21328745 - 21328775
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  21328745 acaaagtaagagtacaccacctcttataaaa 21328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Original strand, 21328813 - 21328843
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  21328813 acaaagtaagagtacaccacctcttataaaa 21328843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 18024786 - 18024753
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  18024786 aacaacgtaagagtacaccacctcttataaaaca 18024753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 127
Target Start/End: Original strand, 21328779 - 21328808
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaa 127  Q
    ||||||||||||||||||||||||||||||    
T  21328779 acaaagtaagagtacaccacctcttataaa 21328808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Original strand, 16197664 - 16197692
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  16197664 aagtaagagtacaccacctcttataaaac 16197692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 19879614 - 19879646
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaac 129  Q
    ||||| |||||||||||||||||||||||||||    
T  19879614 aacaacgtaagagtacaccacctcttataaaac 19879646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 21980627 - 21980599
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  21980627 aaagtaagagtacaccacctcttataaaa 21980599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 21985610 - 21985582
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  21985610 aaagtaagagtacaccacctcttataaaa 21985582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 23409422 - 23409454
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaaca 130  Q
    |||| ||||||||||||||||||||||||||||    
T  23409422 acaacgtaagagtacaccacctcttataaaaca 23409454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 42560649 - 42560617
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaac 129  Q
    ||||| |||||||||||||||||||||||||||    
T  42560649 aacaacgtaagagtacaccacctcttataaaac 42560617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 107; Significance: 1e-53; HSPs: 12)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 103 - 311
Target Start/End: Original strand, 175819 - 176023
Alignment:
Q  103 gtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    ||||||||||||||||||||||| ||||| || |||| | |||||| ||||||| | ||||||||| |||||||||||||||||||||||||| |   |     
T  175819 gtaagagtacaccacctcttatagaaacatctaacatgatcaatcatcaacaacagatacaactacaacttcaacaacaacaccaacgatgataacaac- 175917  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  175918 atcgacaat-----ttgcataatttacttatgactcattcggcaacgtacaacccagcacgcttacaatttaaaccaacattcacatcttaattaagatc 176012  T
Q  301 caacagcaaca 311  Q
    |||||||||||    
T  176013 caacagcaaca 176023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 103 - 311
Target Start/End: Original strand, 168465 - 168669
Alignment:
Q  103 gtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    ||||||||||||||||||||||| ||||| || || | | |||||||||| ||||| |||||||||||||||||||||||||||||||||||| |   |     
T  168465 gtaagagtacaccacctcttatagaaacatctaacctgatcaatcaccaaaaacggatacaactacgacttcaacaacaacaccaacgatgataacaac- 168563  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     || |||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  168564 atcgacaat-----tttcataatttacttatgactcattcggcaatgtacaacctagcacgcttacaatttaaaccaacattcacatcttaattaagatc 168658  T
Q  301 caacagcaaca 311  Q
    |||||||||||    
T  168659 caacagcaaca 168669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 98 - 311
Target Start/End: Complemental strand, 153242 - 153033
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgat 197  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||     
T  153242 acaaagtaagagtataccacctcgtataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaataacaccaatgatgatga- 153144  T
Q  198 gtccatctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
       ||   ||| | |   ||||||||  ||||||||||| |||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||    
T  153143 ---ca--acatcgacaatttgcataacatacttatgacttattcggcaacgtacaacccaacaacgcttacaacttaagccaacatttacatcttaatta 153049  T
Q  296 agatccaacagcaaca 311  Q
    |||| || ||||||||    
T  153048 agattcagcagcaaca 153033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 101 - 311
Target Start/End: Complemental strand, 163363 - 163158
Alignment:
Q  101 aagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtc 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||        
T  163363 aagtaagagtacaccacctcttataaaacaactgacataaacaatcaccaacaacgac-acaactacgacttcaacaacaacaccaacgatgatga---- 163269  T
Q  201 catctcattg-ctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaaga 298  Q
    ||   ||| | |   ||||||||  ||||||| ||| ||||||||||||||| |||| | || ||||||| ||| ||||||||| |||||||||||||||    
T  163268 ca--acatcgacaatttgcataacatacttatcacttattcggcaacgtacatcccaacaacgcttacaacttagaccaacatttacatcttaattaaga 163171  T
Q  299 tccaacagcaaca 311  Q
    | |||||||||||    
T  163170 ttcaacagcaaca 163158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 175476 - 175540
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  175476 aagatcatcataacctcgtcatactcatcaacataaacaatgtaagagtacaccacctcttataa 175540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 163579 - 163501
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaaac 129  Q
    |||||||||| |  ||| ||| ||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  163579 caacactataaacaatcgtcacaacatcgtcataatcatcaacataaacaacgtaagagtacaccacctcttataaaac 163501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 153742 - 153682
Alignment:
Q  66 tcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||| |||||||| | | |||||||||||| || |||||||||||||||| ||||    
T  153742 tcatcataacatcgtcataataaacaacataaacaacgtgagagtacaccacctctcataa 153682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Complemental strand, 153312 - 153282
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  153312 acaaagtaagagtacaccacctcttataaaa 153282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 128
Target Start/End: Complemental strand, 153378 - 153348
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||||    
T  153378 acaaagtaagagtacaccacctcttataaaa 153348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 153342 - 153314
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  153342 aagtaagagtacaccacctcttataaaac 153314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 153508 - 153480
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  153508 aagtaagagtacaccacctcttataaaac 153480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 153574 - 153546
Alignment:
Q  101 aagtaagagtacaccacctcttataaaac 129  Q
    |||||||||||||||||||||||||||||    
T  153574 aagtaagagtacaccacctcttataaaac 153546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 103 - 311
Target Start/End: Original strand, 28385270 - 28385474
Alignment:
Q  103 gtaagagtacaccacctcttata-aaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgtcc 201  Q
    ||||||||||||||||||||||| ||||| || || | | |||||||||||||||| |||||||||||||||||||||||||||||||||||| |   |     
T  28385270 gtaagagtacaccacctcttatagaaacatctaacctgatcaatcaccaacaacggatacaactacgacttcaacaacaacaccaacgatgataacaac- 28385368  T
Q  202 atct-cattgctggttgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatc 300  Q
    |||  || |     |||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||||    
T  28385369 atcgacaat-----ttgcataatttacttatgactcattcggcaacgtacaacttagcacgcttccaatttaaaccaacattcacatcttaattaagatc 28385463  T
Q  301 caacagcaaca 311  Q
    |||||||||||    
T  28385464 caacagcaaca 28385474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 308
Target Start/End: Complemental strand, 4831805 - 4831598
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  4831805 aacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacgacttcaacaacaacacggacgatgatga 4831706  T
Q  197 tgtccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
        ||||     ||   ||||||||  ||||||||||| ||||| ||||||||||| || | || ||||||| ||| ||||||||| |||||||| |||    
T  4831705 -caacatc----ggcaatttgcataacatacttatgacttattcgacaacgtacaactcaacaacgcttacaacttagaccaacatttacatcttagtta 4831611  T
Q  296 agatccaacagca 308  Q
    |||| ||||||||    
T  4831610 agattcaacagca 4831598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 308
Target Start/End: Complemental strand, 4835100 - 4834893
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  4835100 aacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacgacttcaacaacaacacggacgatgatga 4835001  T
Q  197 tgtccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
        ||||     ||   ||||||||  ||||||||||| ||||| ||||||||||| || | || ||||||| ||| ||||||||| |||||||| |||    
T  4835000 -caacatc----ggcaatttgcataacatacttatgacttattcgacaacgtacaactcaacaacgcttacaacttagaccaacatttacatcttagtta 4834906  T
Q  296 agatccaacagca 308  Q
    |||| ||||||||    
T  4834905 agattcaacagca 4834893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 37839171 - 37839097
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37839171 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 37839097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 42597900 - 42597826
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42597900 caacattatataagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 42597826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 30146252 - 30146337
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaac 182  Q
    |||||||||||||||||| |||||||| | ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  30146252 aacaaagtaagagtacactacctcttacacaacacttgacataatcattcaccaacaacggctacaactacgacttcaacaacaac 30146337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 28384961 - 28385025
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28384961 aagatcatcataacatcgtcatactcatcaacataaacaacgtaagagtacaccacctcttataa 28385025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 37838953 - 37838876
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  37838953 gtaagagtacactacctcttagaaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 37838876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 42597682 - 42597605
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  42597682 gtaagagtacactacctcttagaaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 42597605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 9923128 - 9923208
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaac 176  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||    
T  9923128 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaac 9923208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 11479731 - 11479651
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaac 176  Q
    ||||| ||||||||||||||||||| | |||||||| || |||||||| ||||||||||| ||| ||||||||||||||||    
T  11479731 aacaacgtaagagtacaccacctctcacaaaacaccagaacataaacagtcaccaacaacagcttcaactacgacttcaac 11479651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 15884422 - 15884339
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||| ||| |||||||||||| || |||||| ||||| ||||| ||| |||||||||||||||||||    
T  15884422 aacaacgtaagagtacaccacgtctcataaaacacctgaacgtaaacagtcacctacaacagcttcaactacgacttcaacaac 15884339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 26013238 - 26013321
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | |||||||||| ||||||||| | ||||||||| ||| ||||| |||||||||||||    
T  26013238 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagttaccaacaacagcttcaactccgacttcaacaac 26013321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 15497400 - 15497318
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaa 178  Q
    ||||| |||| |||||||||||||| | ||||||||||| |||||||| |||||||||||  || ||||||||||||||||||    
T  15497400 aacaacgtaatagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaa 15497318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 14746947 - 14746864
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| ||||||| || ||||||||| |||| || ||| ||| |||||||||||| ||||||    
T  14746947 aacaacgtaagagtacaccacctcttacaaaacacatgaacataaacagtcactaataacagcttcaactacgactttaacaac 14746864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 40619582 - 40619665
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||| ||||||||  | |||||| |||| |||||||| ||||||||||| ||| ||||||||||||| |||||    
T  40619582 aacaacgtaagagtaaaccacctcccacaaaacatctgaacataaacagtcaccaacaacagcttcaactacgacttcgacaac 40619665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 40906925 - 40906975
Alignment:
Q  261 acttacaatttaaaccaacattcacatcttaattaagatccaacagcaaca 311  Q
    |||||||| ||| ||||||||| |||||||||||||||| |||||||||||    
T  40906925 acttacaacttataccaacatttacatcttaattaagattcaacagcaaca 40906975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 4831874 - 4831841
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  4831874 aacaacgtaagagtacaccacctcttataaaaca 4831841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 4835169 - 4835136
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  4835169 aacaacgtaagagtacaccacctcttataaaaca 4835136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 30146216 - 30146249
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  30146216 aacaacgtaagagtacaccacctcttataaaaca 30146249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 129
Target Start/End: Complemental strand, 37839053 - 37839024
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||    
T  37839053 aaagtaagagtacaccacctcttataaaac 37839024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 129
Target Start/End: Complemental strand, 42597782 - 42597753
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||    
T  42597782 aaagtaagagtacaccacctcttataaaac 42597753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 9923031 - 9923063
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaaca 130  Q
    |||| ||||||||||||||||||||||||||||    
T  9923031 acaacgtaagagtacaccacctcttataaaaca 9923063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 11480056 - 11480024
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaaca 130  Q
    |||| ||||||||||||||||||||||||||||    
T  11480056 acaacgtaagagtacaccacctcttataaaaca 11480024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 15497530 - 15497498
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaac 129  Q
    ||||| |||||||||||||||||||||||||||    
T  15497530 aacaacgtaagagtacaccacctcttataaaac 15497498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 30146360 - 30146444
Alignment:
Q  225 tacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaagatccaacagca 308  Q
    ||||||||||| ||||| ||||||||||| || | || ||||||| ||| ||||||| | |||||||| ||||||| | ||||||    
T  30146360 tacttatgacttattcgacaacgtacaactcaacaacgcttacaacttagaccaacacttacatcttagttaagattcgacagca 30146444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 97; Significance: 1e-47; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 97 - 305
Target Start/End: Original strand, 28751 - 28955
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28751 aacaaagtaagagtacaccacctcttataaagcacctgacataaacaataaccaacaacggctacaactacggcttcaacaacaacaccaacgatgatga 28850  T
Q  197 tgtccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
        ||||  |       || |||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||||||||||||| ||||||||||||    
T  28851 -caacatcgaa----aattttcataacatacttatgacttattcggcaacgtacaacccaacaacgcttacaacttaaaccaacatttacatcttaatta 28945  T
Q  296 agatccaaca 305  Q
    |||| |||||    
T  28946 agattcaaca 28955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 97 - 305
Target Start/End: Original strand, 34216 - 34420
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34216 aacaaagtaagagtacaccacctcttataaagcacctgacataaacaataaccaacaacggctacaactacggcttcaacaacaacaccaacgatgatga 34315  T
Q  197 tgtccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
        ||||  |       || |||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||||||||||||| ||||||||||||    
T  34316 -caacatcgaa----aattttcataacatacttatgacttattcggcaacgtacaacccaacaacgcttacaacttaaaccaacatttacatcttaatta 34410  T
Q  296 agatccaaca 305  Q
    |||| |||||    
T  34411 agattcaaca 34420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 28621 - 28681
Alignment:
Q  66 tcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||| |||||||| |||  ||||||||||| || |||||||| ||||||| ||||    
T  28621 tcatcataacatcgtcataatcaataacataaacaacgtgagagtacatcacctctcataa 28681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 34086 - 34146
Alignment:
Q  66 tcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataa 126  Q
    |||||||||| |||||||| |||  ||||||||||| || |||||||| ||||||| ||||    
T  34086 tcatcataacatcgtcataatcaataacataaacaacgtgagagtacatcacctctcataa 34146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 101 - 311
Target Start/End: Complemental strand, 14420 - 14212
Alignment:
Q  101 aagtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatgatgt 199  Q
    |||||||||||||||||||||||||||| || || |||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||| |       
T  14420 aagtaagagtacaccacctcttataaaaacatctaacatgatcaatcaccaacaacggatacaactacgacttcaacaacaacaccaacgatgataacaa 14321  T
Q  200 ccatct-cattgctggttgcataatttacttatgactcatt-cggcaacgtacaacccagca-cacttacaatttaaaccaacattcacatcttaattaa 296  Q
    | |||  || |     |||||||| |||||||||||||||| ||||||||||||||||| || | ||||||||||| |||||||||||||||||||||||    
T  14320 c-atcgacaat-----ttgcataacttacttatgactcatttcggcaacgtacaacccaacaacgcttacaatttagaccaacattcacatcttaattaa 14227  T
Q  297 gatccaacagcaaca 311  Q
    |||||||||||||||    
T  14226 gatccaacagcaaca 14212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 92; Significance: 1e-44; HSPs: 4)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 118 - 311
Target Start/End: Original strand, 34955 - 35144
Alignment:
Q  118 ctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaa-caccaacgatgatgatgtccatct-cattgctggt 215  Q
    ||||||||||| | || |||| | |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |   | |||  || |     |    
T  34955 ctcttataaaatatctaacatgatcaatcaccaacaacggatacaactacgacttcaacaacaaacaccaacgatgataacaac-atcgacaat-----t 35048  T
Q  216 tgcataatttacttatgactcattcggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatccaacagcaaca 311  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35049 tgcataacttacttatgactcatttggcaacgtacaacccaacacacttacaatttaaaccaacattcacatcttaattaagatccaacagcaaca 35144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 24109 - 24274
Alignment:
Q  142 caatcaccaacaacggctacaactacgacttcaacaacaa-caccaacgatgatgatgtccatct-cattgctggttgcataatttacttatgactcatt 239  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |   | |||  || |     |||||||| ||||||||||||||||    
T  24109 caatcaccaacaacggatacaactacgacttcaacaacaaacaccaacgatgataacaac-atcgacaat-----ttgcataacttacttatgactcatt 24202  T
Q  240 cggcaacgtacaacccagcacacttacaatttaaaccaacattcacatcttaattaagatccaacagcaaca 311  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24203 tggcaacgtacaacccaacacacttacaatttaaaccaacattcacatcttaattaagatccaacagcaaca 24274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 34123 - 34181
Alignment:
Q  67 catcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34123 catcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttata 34181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 34225 - 34253
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  34225 aaagtaagagtacaccacctcttataaaa 34253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 172893 - 172794
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaa-cacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||||||| || || |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  172893 acaaagtaagagtacaccacctcttataaaaacatctaacatgaacaatcaccaacaacggatacaactacgacttcaacaacaacaccaacgatgatga 172794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 173205 - 173133
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctctta 123  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  173205 caacactataaaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctctta 173133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 172958 - 172930
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  172958 aaagtaagagtacaccacctcttataaaa 172930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 173058 - 173030
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  173058 aaagtaagagtacaccacctcttataaaa 173030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 109 - 181
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctctta 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  109 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctctta 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 362 - 439
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||||  || |||||||||||||||||||    
T  362 gtaagagtacaccacctcttacaaaacacctgaacataaacagtcaccaacaactacttcaactacgacttcaacaac 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 227 - 255
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  227 aaagtaagagtacaccacctcttataaaa 255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 308
Target Start/End: Original strand, 48178 - 48385
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    |||||||||| |||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  48178 aacaaagtaaaagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacgacttcaacaacaacacggacgatgatga 48277  T
Q  197 tgtccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
       | |||     ||   ||||||||  ||||||||||| ||||| ||||||||||| || | || ||||||| ||| ||||| ||| |||||||| |||    
T  48278 caac-atcg----gcaatttgcataacatacttatgacttattcgacaacgtacaactcaacaacgcttacaacttagaccaatatttacatcttagtta 48372  T
Q  296 agatccaacagca 308  Q
    |||| ||||||||    
T  48373 agattcaacagca 48385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 48109 - 48142
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  48109 aacaacgtaagagtacaccacctcttataaaaca 48142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 126
Target Start/End: Original strand, 48145 - 48174
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataa 126  Q
    ||||||||||||||||||||||||||||||    
T  48145 aacaaagtaagagtacaccacctcttataa 48174  T

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Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 308
Target Start/End: Original strand, 22702949 - 22703156
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||||||||||||||||| | |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  22702949 aacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacgacttcaacaacaactcggacgatgatga 22703048  T
Q  197 tgtccatctcattgctggttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaatta 295  Q
       | |||     ||   ||||||||  ||||||||||| ||||| ||||||||||| || | || ||||||| |||  |||||||| |||||||| |||    
T  22703049 caac-atcg----gcaatttgcataacatacttatgacttattcgacaacgtacaactcaacaacgcttacaacttagtccaacatttacatcttagtta 22703143  T
Q  296 agatccaacagca 308  Q
    |||| ||||||||    
T  22703144 agattcaacagca 22703156  T

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Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 37379146 - 37379209
Alignment:
Q  62 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37379146 aagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 37379209  T

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Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 37379353 - 37379430
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  37379353 gtaagagtacactacctcttagaaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 37379430  T

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Target: chr2; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 21914667 - 21914750
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  21914667 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 21914750  T

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Target: chr2; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 24316458 - 24316375
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  24316458 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagctccaactacgacttcaacaac 24316375  T

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Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 24681173 - 24681256
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||| ||||||| ||| ||| |||||||||||||||||||    
T  24681173 aacaacgtaagagtacaccacctcttacaaaacacctgaacataaacagtcaccaataacagcttcaactacgacttcaacaac 24681256  T

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Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 34492499 - 34492416
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  34492499 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 34492416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 34874576 - 34874493
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  34874576 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 34874493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 13101884 - 13101802
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  13101884 acaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 13101802  T

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Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 24670758 - 24670835
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||||||| ||| ||| |||||||||||||||||||    
T  24670758 gtaagagtacaccacctcttacaaaacacctgaacataaacagtcaccaataacagcttcaactacgacttcaacaac 24670835  T

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Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 23707653 - 23707569
Alignment:
Q  96 aaacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||  || |||||||||||||||||||    
T  23707653 aaacaacgtaagagtacaccacctcttacaaaacacctgaacataaacagtcaccaataacaccttcaactacgacttcaacaac 23707569  T

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Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 24917867 - 24917950
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| |||||||||||| |||||||| ||||||||||| |||||||| ||||||| ||| ||| |||||||||||||||||||    
T  24917867 aacaacgtaagagtacacaacctcttacaaaacacctgaacataaacagtcaccaataacagcttcaactacgacttcaacaac 24917950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 27472176 - 27472259
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||| | | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  27472176 aacaacgtaagagtacaccacctatcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 27472259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 22459926 - 22459844
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaa 178  Q
    ||||| ||||||||||||||||||| | |||||||||| ||||||||| ||||||| ||| ||| ||||||| ||||||||||    
T  22459926 aacaatgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaataacagcttcaactactacttcaacaa 22459844  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 18359196 - 18359108
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaacaacac 184  Q
    ||||| ||||||||||||||||||| | ||| ||||||| |||||||| ||||| ||||   || ||||||||||||||||||||||||    
T  18359196 aacaacgtaagagtacaccacctctcacaaagcacctgaacataaacagtcaccgacaagaacttcaactacgacttcaacaacaacac 18359108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 21082100 - 21082016
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaaca 180  Q
    ||||| ||||||||| ||||||||  | |||||| |||| ||||||||||||||||||||  || ||||||||||||||| ||||    
T  21082100 aacaacgtaagagtaaaccacctcccacaaaacatctgaacataaacaatcaccaacaacatcttcaactacgacttcaaaaaca 21082016  T

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Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 22702873 - 22702913
Alignment:
Q  90 caacataaacaaagtaagagtacaccacctcttataaaaca 130  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  22702873 caacataaacaacgtaagagtacaccacctcttataaaaca 22702913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 18359229 - 18359196
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||||||||||||||||||||||||||||||||    
T  18359229 aacaaagtaagagtacaccacctcttataaaaca 18359196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 27485490 - 27485413
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||| | ||||||  | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  27485490 gtaagagtaaatcacctcgcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 27485413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 126
Target Start/End: Original strand, 22702916 - 22702945
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataa 126  Q
    ||||||||||||||||||||||||||||||    
T  22702916 aacaaagtaagagtacaccacctcttataa 22702945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 129
Target Start/End: Original strand, 37379253 - 37379282
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaac 129  Q
    ||||||||||||||||||||||||||||||    
T  37379253 aaagtaagagtacaccacctcttataaaac 37379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 34874673 - 34874641
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaaca 130  Q
    |||| ||||||||||||||||||||||||||||    
T  34874673 acaacgtaagagtacaccacctcttataaaaca 34874641  T

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Target: scaffold0679 (Bit Score: 71; Significance: 4e-32; HSPs: 3)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 3245 - 3171
Alignment:
Q  51 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3245 caacactatagaagatcatcataacctcgtcatactcatcaacataaacaacgtaagagtacaccacctcttata 3171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 2796 - 2714
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  2796 acaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 2714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 3127 - 3099
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  3127 aaagtaagagtacaccacctcttataaaa 3099  T

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Target: scaffold0021 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 146036 - 146123
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacac 184  Q
    |||||||||||||||||||||| |||| | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  146036 aacaaagtaagagtacaccaccacttacacaacacctgacataatcattcaccaacaacggctacaactacgacttcaacaacaacac 146123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 146149 - 146243
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacattcacatcttaattaagatccaacagca 308  Q
    ||||||||  ||||||||||| ||||| ||||||||||| || | || ||||||| ||| ||||||||| |||||||| || |||  ||||||||    
T  146149 ttgcataacatacttatgacttattcgacaacgtacaactcaacaacgcttacaacttagaccaacatttacatcttagttcagaatcaacagca 146243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 145967 - 146000
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  145967 aacaacgtaagagtacaccacctcttataaaaca 146000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 17918 - 18004
Alignment:
Q  111 acaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||||||||||  ||||||||||    
T  17918 acaccacctcttacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaacaacacggacgatgatga 18004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 208655 - 208717
Alignment:
Q  65 atcatcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttataaa 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  208655 atcatcataacctcgtcatactcatcaacataaacaatgtaagattacaccacctcttataaa 208717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 208892 - 208986
Alignment:
Q  218 cataatttacttatgactcattcggcaacgtacaacccagcaca-cttacaatttaaaccaacattcacatcttaattaagatccaacagcaaca 311  Q
    ||||| |||| ||||||| |||||||||||||||||||| ||   ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  208892 cataacttacatatgacttattcggcaacgtacaacccaacaatgcttacaatttagaccaacatttacatcttaattaagatccaacagcaaca 208986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 128
Target Start/End: Original strand, 208722 - 208753
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaa 128  Q
    ||||||||||||||||||||||||||||||||    
T  208722 aacaaagtaagagtacaccacctcttataaaa 208753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 194
Target Start/End: Original strand, 208838 - 208873
Alignment:
Q  159 tacaactacgacttcaacaacaacaccaacgatgat 194  Q
    |||||||||||||||||||||||||||| |||||||    
T  208838 tacaactacgacttcaacaacaacaccagcgatgat 208873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 208759 - 208787
Alignment:
Q  100 aaagtaagagtacaccacctcttataaaa 128  Q
    |||||||||||||||||||||||||||||    
T  208759 aaagtaagagtacaccacctcttataaaa 208787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 7913 - 7996
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||||||  || |||||||||||||||||||    
T  7913 aacaacgtaagagtacaccacctcttacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 7996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 7305 - 7222
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  7305 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 7222  T

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Target: scaffold0356 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 803 - 720
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  803 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 720  T

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Target: scaffold0317 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 7266 - 7183
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| |||| |||||| |||||||||||||||| ||| ||| |||||||||||||||||||    
T  7266 aacaacgtaagagtacaccacctcttacaaaatacctgaacataaacaatcaccaataacagcttcaactacgacttcaacaac 7183  T

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Target: scaffold0022 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 54202 - 54119
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||| ||| ||| |||||||||||||||||||    
T  54202 aacaacgtaagagtacaccacctcttgaaaaacacctgaacataaacaatcaccaataacagcttcaactacgacttcaacaac 54119  T

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Target: scaffold0076 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 24958 - 24877
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaa 178  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  24958 aacaatgtaagagtacaccacctcttataaa-cacctgaacataaacaatcaccaataacagcttcaactacgacttcaacaa 24877  T

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Target: scaffold0802 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 5777 - 5697
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaac 176  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||    
T  5777 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaac 5697  T

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Target: scaffold0877 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 3087 - 3004
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  3087 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 3004  T

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Target: scaffold0877; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 3119 - 3087
Alignment:
Q  98 acaaagtaagagtacaccacctcttataaaaca 130  Q
    |||| ||||||||||||||||||||||||||||    
T  3119 acaatgtaagagtacaccacctcttataaaaca 3087  T

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Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 67018 - 67101
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  67018 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 67101  T

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Target: scaffold0025 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 78160 - 78243
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  78160 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacatcttcaactacgacttcaacaac 78243  T

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Target: scaffold0020 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 170113 - 170030
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||  || |||||||||||||||||||    
T  170113 aacaacgtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacaacttcaactacgacttcaacaac 170030  T

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Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 21708 - 21791
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| ||||||||||||||||||||| |||||| |||| |||||||| ||||||| ||| ||| |||||||||||||||||||    
T  21708 aacaacgtaagagtacaccacctcttacaaaacatctgaacataaacagtcaccaataacagcttcaactacgacttcaacaac 21791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 449 - 391
Alignment:
Q  67 catcataacctcgtcatactcatcaacataaacaaagtaagagtacaccacctcttata 125  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  449 catcataccctcatcatactcatcaacataaacaacgtaagagtacaccacctcttata 391  T

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Target: scaffold0577 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 7698 - 7772
Alignment:
Q  106 agagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    |||||||||||||||| | ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  7698 agagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 7772  T

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Target: scaffold0014 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 126784 - 126865
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaaca 177  Q
    ||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||||| ||| ||| |||||||||||||||||    
T  126784 aacaacgtaagagtacaccacctctcacaaaacacctgagcataaacactcaccaataacagcttcaactacgacttcaaca 126865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 77742 - 77827
Alignment:
Q  97 aacaaagtaagagtacaccacctct--tataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||| |||||||||||||||||||  |||||||||||||| |||||||| ||| |||||||  || |||||||||||||||||||    
T  77742 aacaacgtaagagtacaccacctctcatataaaacacctgaacataaacagtcatcaacaacaacttcaactacgacttcaacaac 77827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 35 - 92
Alignment:
Q  139 aaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||| || | ||||||||||||||| |||||||||||||||||||||||||    
T  35 aaacaatcacccacgatggctacaactacgacatcaacaacaacaccaacgatgatga 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 4453 - 4510
Alignment:
Q  139 aaacaatcaccaacaacggctacaactacgacttcaacaacaacaccaacgatgatga 196  Q
    ||||||||||| || | ||||||||||||||| |||||||||||||||||||||||||    
T  4453 aaacaatcacccacgatggctacaactacgacatcaacaacaacaccaacgatgatga 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 106 - 174
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacatt 282  Q
    ||||||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||| |||||||||    
T  106 ttgcataacatacttatgacttattcggcaacgtacaacccaacaacgcttacaacttataccaacatt 174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 4524 - 4592
Alignment:
Q  215 ttgcataatttacttatgactcattcggcaacgtacaacccagc-acacttacaatttaaaccaacatt 282  Q
    ||||||||  ||||||||||| |||||||||||||||||||| | || ||||||| ||| |||||||||    
T  4524 ttgcataacatacttatgacttattcggcaacgtacaacccaacaacgcttacaacttataccaacatt 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 70822 - 70745
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||||||||||| | |||||| |||| |||||||| |||||||||||  || |||||||||||||||||||    
T  70822 gtaagagtacaccacctctcacaaaacatctgaacataaacagtcaccaacaacatcttcaactacgacttcaacaac 70745  T

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Target: scaffold1783 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 129 - 209
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaacaacac 184  Q
    |||||| ||||||||||||||| ||||| |  || ||| || ||||||||||| ||| ||||||||||||||||||||||||    
T  129 gtaagattacaccacctcttatgaaacaaca-acgtaatcagtcaccaacaacagcttcaactacgacttcaacaacaacac 209  T

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Target: scaffold0515 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 4082 - 4155
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaa 175  Q
    ||||||||||||||||||| | |||||||||| |||||||||  ||||||||||  || |||||||||||||||    
T  4082 gtaagagtacaccacctctcacaaaacacctgaacataaacagccaccaacaacaacttcaactacgacttcaa 4155  T

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Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 4082 - 4155
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaa 175  Q
    ||||||||||||||||||| | |||||||||| |||||||||  ||||||||||  || |||||||||||||||    
T  4082 gtaagagtacaccacctctcacaaaacacctgaacataaacagccaccaacaacaacttcaactacgacttcaa 4155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 642 - 717
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaaca 177  Q
    |||| |||||||||||||||| |||||||||| ||||||||| ||||||| |||  || |||||||||||| ||||    
T  642 gtaacagtacaccacctcttacaaaacacctgaacataaacagtcaccaataacatcttcaactacgactttaaca 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 1 - 56
Alignment:
Q  125 aaaacacctga-cataaacaatcaccaacaacggctacaactacgacttcaacaac 179  Q
    ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||    
T  1 aaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttcaacaac 56  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 15515 - 15568
Alignment:
Q  103 gtaagagtacaccacctcttataaaacacc-tgacataaacaatcaccaacaac 155  Q
    ||||||||||||||||||||| |||||||| | ||||||||| |||||||||||    
T  15515 gtaagagtacaccacctcttacaaaacaccttaacataaacagtcaccaacaac 15568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 10274 - 10349
Alignment:
Q  106 agagtacaccacctcttataaaacacctga-cataaacaatcaccaa-caacggctacaactacgacttcaacaac 179  Q
    |||||||||||||||| ||||| || |||| |||||||| ||||||| ||||  || |||||||||||||||||||    
T  10274 agagtacaccacctctcataaagcatctgaacataaacagtcaccaaacaacaacttcaactacgacttcaacaac 10349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 362661 - 362736
Alignment:
Q  104 taagagtacaccacctcttataaaacacctg-acataaacaatcaccaacaacggctacaactacgacttcaacaa 178  Q
    |||||||||||||||||| | |||||||||| ||||| ||| || |||| |||  || ||||||||||||||||||    
T  362661 taagagtacaccacctctcacaaaacacctgaacatagacagtccccaataacaacttcaactacgacttcaacaa 362736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 321 - 354
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  321 aacaacgtaagagtacaccacctcttataaaaca 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 22845 - 22812
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaaca 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  22845 aacaacgtaagagtacaccacctcttataaaaca 22812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 3756 - 3724
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaac 129  Q
    ||||| |||||||||||||||||||||||||||    
T  3756 aacaacgtaagagtacaccacctcttataaaac 3724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 69056 - 69088
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaac 129  Q
    ||||| |||||||||||||||||||||||||||    
T  69056 aacaacgtaagagtacaccacctcttataaaac 69088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 159080 - 159112
Alignment:
Q  97 aacaaagtaagagtacaccacctcttataaaac 129  Q
    ||||| |||||||||||||||||||||||||||    
T  159080 aacaacgtaagagtacaccacctcttataaaac 159112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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