View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0749_low_5 (Length: 574)

Name: NF0749_low_5
Description: NF0749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0749_low_5
NF0749_low_5
[»] chr6 (57 HSPs)
chr6 (193-567)||(12695897-12696282)
chr6 (36-134)||(8805524-8805625)
chr6 (68-134)||(16766703-16766771)
chr6 (68-134)||(9107355-9107423)
chr6 (67-134)||(1532246-1532312)
chr6 (85-132)||(31579229-31579276)
chr6 (96-134)||(7977845-7977883)
chr6 (70-133)||(9522898-9522963)
chr6 (96-134)||(12696330-12696368)
chr6 (68-133)||(34290064-34290129)
chr6 (36-133)||(2117083-2117175)
chr6 (89-133)||(34225817-34225861)
chr6 (68-132)||(5970093-5970159)
chr6 (36-134)||(7086801-7086904)
chr6 (79-134)||(9025490-9025547)
chr6 (96-134)||(17435205-17435243)
chr6 (96-134)||(28715301-28715339)
chr6 (95-132)||(7569182-7569219)
chr6 (96-133)||(10770689-10770726)
chr6 (72-134)||(26562695-26562759)
chr6 (79-132)||(29049893-29049946)
chr6 (96-133)||(31384927-31384964)
chr6 (96-133)||(34595141-34595178)
chr6 (96-132)||(6349752-6349788)
chr6 (85-134)||(7265595-7265646)
chr6 (68-133)||(8365504-8365571)
chr6 (68-133)||(9195739-9195806)
chr6 (95-131)||(16388247-16388283)
chr6 (73-134)||(34073337-34073400)
chr6 (36-83)||(426478-426525)
chr6 (36-83)||(5732474-5732521)
chr6 (68-132)||(9617442-9617508)
chr6 (66-134)||(10842538-10842608)
chr6 (69-133)||(16111743-16111809)
chr6 (95-134)||(19040358-19040397)
chr6 (95-133)||(7151419-7151457)
chr6 (96-134)||(17841604-17841642)
chr6 (96-134)||(31959165-31959203)
chr6 (34-64)||(34073276-34073306)
chr6 (96-133)||(1681765-1681802)
chr6 (96-133)||(6898296-6898333)
chr6 (96-133)||(7801171-7801208)
chr6 (36-129)||(7973665-7973761)
chr6 (96-133)||(8776988-8777025)
chr6 (96-133)||(15489747-15489784)
chr6 (96-133)||(16833315-16833352)
chr6 (95-132)||(17341678-17341715)
chr6 (71-132)||(34447348-34447409)
chr6 (96-132)||(6327533-6327569)
chr6 (85-134)||(7938122-7938173)
chr6 (68-132)||(8713987-8714054)
chr6 (73-134)||(8931592-8931655)
chr6 (73-134)||(20576623-20576686)
chr6 (96-132)||(25038086-25038122)
chr6 (84-133)||(26178682-26178733)
chr6 (68-132)||(28862129-28862196)
chr6 (85-134)||(33001291-33001342)
[»] chr5 (46 HSPs)
chr5 (5-134)||(38816618-38816748)
chr5 (36-133)||(22423764-22423864)
chr5 (311-401)||(36072807-36072897)
chr5 (36-134)||(36838549-36838650)
chr5 (68-134)||(39698547-39698615)
chr5 (68-131)||(37328829-37328894)
chr5 (96-134)||(43001806-43001844)
chr5 (68-134)||(3966509-3966577)
chr5 (68-134)||(7677711-7677779)
chr5 (68-134)||(21522756-21522824)
chr5 (68-134)||(21533322-21533390)
chr5 (68-133)||(41995478-41995543)
chr5 (68-133)||(21542037-21542104)
chr5 (36-111)||(9929649-9929720)
chr5 (37-132)||(13287354-13287450)
chr5 (96-134)||(21191071-21191109)
chr5 (96-134)||(21576760-21576798)
chr5 (96-134)||(27932241-27932279)
chr5 (434-540)||(36072657-36072763)
chr5 (96-134)||(41633741-41633779)
chr5 (96-133)||(6247629-6247666)
chr5 (34-83)||(8420075-8420124)
chr5 (68-134)||(18592079-18592147)
chr5 (72-132)||(41794068-41794129)
chr5 (68-132)||(2419865-2419929)
chr5 (68-132)||(19552530-19552594)
chr5 (96-132)||(24906316-24906352)
chr5 (95-134)||(6471903-6471942)
chr5 (95-134)||(22013420-22013459)
chr5 (98-132)||(4344750-4344784)
chr5 (96-134)||(6326312-6326350)
chr5 (96-134)||(8420033-8420071)
chr5 (96-134)||(14674275-14674313)
chr5 (34-64)||(24906250-24906280)
chr5 (85-132)||(28588676-28588725)
chr5 (96-134)||(31084329-31084367)
chr5 (77-132)||(38749557-38749614)
chr5 (95-133)||(40131628-40131666)
chr5 (96-134)||(42893366-42893404)
chr5 (95-132)||(5467992-5468029)
chr5 (68-134)||(19579707-19579775)
chr5 (85-133)||(6770550-6770598)
chr5 (68-133)||(21351890-21351957)
chr5 (85-134)||(30502390-30502441)
chr5 (85-134)||(30542733-30542784)
chr5 (69-134)||(41091243-41091310)
[»] chr8 (36 HSPs)
chr8 (36-134)||(25566847-25566949)
chr8 (68-133)||(15816114-15816181)
chr8 (83-134)||(37283812-37283863)
chr8 (73-131)||(9382981-9383039)
chr8 (68-134)||(22651982-22652050)
chr8 (68-134)||(29510289-29510357)
chr8 (68-133)||(2572041-2572108)
chr8 (95-133)||(7658470-7658508)
chr8 (73-132)||(11927076-11927137)
chr8 (95-133)||(13203648-13203686)
chr8 (36-134)||(34897091-34897180)
chr8 (68-134)||(4611540-4611608)
chr8 (96-133)||(4948659-4948696)
chr8 (95-134)||(3025557-3025596)
chr8 (96-134)||(7442851-7442889)
chr8 (96-134)||(8342978-8343016)
chr8 (96-134)||(8343322-8343360)
chr8 (95-133)||(14134706-14134744)
chr8 (96-134)||(22596000-22596038)
chr8 (68-134)||(29776042-29776108)
chr8 (96-134)||(30077402-30077440)
chr8 (70-112)||(36107688-36107730)
chr8 (72-134)||(13436953-13437017)
chr8 (68-134)||(25172683-25172751)
chr8 (99-132)||(28642416-28642449)
chr8 (96-133)||(36450769-36450806)
chr8 (99-132)||(41831958-41831991)
chr8 (85-134)||(13844598-13844649)
chr8 (96-128)||(18170497-18170529)
chr8 (96-128)||(18634065-18634097)
chr8 (96-132)||(20873077-20873113)
chr8 (73-134)||(24362192-24362255)
chr8 (96-132)||(24669441-24669477)
chr8 (68-133)||(29447095-29447162)
chr8 (77-134)||(34222953-34223012)
chr8 (91-131)||(38487228-38487268)
[»] chr1 (56 HSPs)
chr1 (34-130)||(44482240-44482343)
chr1 (68-134)||(17754317-17754385)
chr1 (68-132)||(6612156-6612222)
chr1 (77-134)||(1486703-1486762)
chr1 (68-132)||(47989505-47989571)
chr1 (96-133)||(18190123-18190160)
chr1 (68-134)||(21038089-21038157)
chr1 (68-130)||(25361896-25361960)
chr1 (85-134)||(25452152-25452201)
chr1 (36-89)||(48547938-48547991)
chr1 (68-133)||(9828051-9828118)
chr1 (95-134)||(398779-398818)
chr1 (74-134)||(8010278-8010340)
chr1 (96-134)||(113305-113343)
chr1 (37-133)||(10572535-10572641)
chr1 (96-134)||(21378584-21378622)
chr1 (68-134)||(5376485-5376553)
chr1 (89-133)||(9033015-9033060)
chr1 (68-134)||(9629885-9629953)
chr1 (85-133)||(14248837-14248883)
chr1 (96-133)||(24577201-24577238)
chr1 (68-134)||(26238101-26238165)
chr1 (68-134)||(5944287-5944357)
chr1 (68-134)||(31694695-31694765)
chr1 (85-134)||(36878467-36878518)
chr1 (96-132)||(40258948-40258984)
chr1 (85-132)||(2288171-2288218)
chr1 (91-134)||(2851027-2851069)
chr1 (95-134)||(5898280-5898319)
chr1 (95-134)||(16927199-16927238)
chr1 (96-131)||(18337338-18337373)
chr1 (70-134)||(34371720-34371785)
chr1 (95-134)||(40181877-40181916)
chr1 (85-132)||(1864882-1864931)
chr1 (95-133)||(7918225-7918263)
chr1 (79-134)||(20157346-20157403)
chr1 (96-134)||(22515902-22515940)
chr1 (85-128)||(23636051-23636096)
chr1 (96-134)||(23738684-23738722)
chr1 (96-134)||(31015049-31015087)
chr1 (96-134)||(31672910-31672948)
chr1 (95-133)||(34298443-34298481)
chr1 (96-134)||(37055871-37055909)
chr1 (96-134)||(38078676-38078714)
chr1 (96-134)||(41877485-41877523)
chr1 (96-134)||(48450602-48450640)
chr1 (96-133)||(1705007-1705044)
chr1 (97-134)||(12443476-12443513)
chr1 (95-132)||(22794092-22794129)
chr1 (96-133)||(22881631-22881668)
chr1 (95-132)||(28674808-28674845)
chr1 (96-133)||(42359464-42359501)
chr1 (73-133)||(10233260-10233323)
chr1 (98-134)||(30847737-30847773)
chr1 (68-133)||(32461449-32461515)
chr1 (77-134)||(34712377-34712436)
[»] chr7 (49 HSPs)
chr7 (36-132)||(11700811-11700909)
chr7 (68-134)||(24339648-24339716)
chr7 (66-134)||(29787354-29787422)
chr7 (66-134)||(26033444-26033514)
chr7 (36-134)||(7328639-7328744)
chr7 (73-131)||(30731046-30731104)
chr7 (68-133)||(9933282-9933347)
chr7 (68-134)||(32308126-32308194)
chr7 (76-132)||(11072306-11072362)
chr7 (68-132)||(15902830-15902896)
chr7 (96-134)||(13770697-13770735)
chr7 (95-133)||(18013088-18013126)
chr7 (96-134)||(21880158-21880196)
chr7 (96-134)||(25481908-25481946)
chr7 (96-134)||(30813818-30813856)
chr7 (93-134)||(2424620-2424661)
chr7 (89-134)||(12289120-12289165)
chr7 (96-133)||(27945048-27945085)
chr7 (77-134)||(5409830-5409889)
chr7 (68-130)||(11272571-11272637)
chr7 (72-133)||(11665429-11665492)
chr7 (68-132)||(9408319-9408385)
chr7 (65-132)||(22200532-22200599)
chr7 (65-132)||(22237222-22237289)
chr7 (98-128)||(4248223-4248253)
chr7 (73-132)||(7438714-7438775)
chr7 (94-132)||(11890932-11890970)
chr7 (34-133)||(13300417-13300509)
chr7 (74-132)||(18039006-18039067)
chr7 (96-134)||(24105684-24105722)
chr7 (96-134)||(28155576-28155614)
chr7 (96-133)||(3991331-3991368)
chr7 (96-133)||(5954254-5954291)
chr7 (95-132)||(8056959-8056995)
chr7 (72-134)||(8160422-8160486)
chr7 (100-133)||(8234153-8234186)
chr7 (93-134)||(14729707-14729748)
chr7 (35-64)||(17852091-17852120)
chr7 (66-132)||(23128644-23128712)
chr7 (95-132)||(27732253-27732290)
chr7 (99-132)||(44020983-44021016)
chr7 (68-133)||(6630897-6630964)
chr7 (77-130)||(9778510-9778565)
chr7 (36-64)||(15680900-15680928)
chr7 (85-134)||(19992007-19992058)
chr7 (85-134)||(20549797-20549848)
chr7 (78-127)||(22602705-22602756)
chr7 (85-134)||(26733310-26733361)
chr7 (97-133)||(35861971-35862007)
[»] chr3 (47 HSPs)
chr3 (66-134)||(8039818-8039888)
chr3 (85-134)||(11251984-11252033)
chr3 (68-134)||(25064915-25064981)
chr3 (66-133)||(34910324-34910393)
chr3 (85-134)||(3618887-3618936)
chr3 (85-134)||(7928456-7928507)
chr3 (68-133)||(14209120-14209187)
chr3 (77-134)||(25948881-25948940)
chr3 (68-131)||(15812808-15812871)
chr3 (87-134)||(27277844-27277891)
chr3 (96-134)||(4987306-4987344)
chr3 (96-134)||(26508116-26508154)
chr3 (96-134)||(28918007-28918045)
chr3 (68-134)||(1509545-1509613)
chr3 (97-134)||(14979187-14979224)
chr3 (66-132)||(16789020-16789088)
chr3 (67-133)||(17005603-17005671)
chr3 (76-133)||(9800047-9800106)
chr3 (77-134)||(49651780-49651839)
chr3 (99-134)||(3164043-3164078)
chr3 (79-134)||(5441029-5441084)
chr3 (98-133)||(10954959-10954994)
chr3 (68-132)||(15796279-15796345)
chr3 (68-132)||(16192735-16192801)
chr3 (96-131)||(20503474-20503509)
chr3 (99-134)||(51206371-51206406)
chr3 (34-72)||(4466538-4466576)
chr3 (96-134)||(4990982-4991020)
chr3 (34-64)||(5440965-5440995)
chr3 (100-134)||(11155030-11155064)
chr3 (34-72)||(13807237-13807275)
chr3 (85-132)||(20691327-20691376)
chr3 (94-132)||(21211296-21211334)
chr3 (96-134)||(21257001-21257039)
chr3 (96-134)||(21479124-21479162)
chr3 (95-133)||(29508451-29508489)
chr3 (95-132)||(4201404-4201441)
chr3 (68-134)||(14832105-14832173)
chr3 (68-134)||(34185108-34185176)
chr3 (96-133)||(55401082-55401119)
chr3 (85-134)||(8383263-8383314)
chr3 (85-133)||(8412949-8412997)
chr3 (96-132)||(10268501-10268537)
chr3 (36-72)||(27505334-27505370)
chr3 (68-133)||(28812522-28812589)
chr3 (85-134)||(38731224-38731275)
chr3 (68-133)||(41961635-41961702)
[»] scaffold1528 (1 HSPs)
scaffold1528 (68-134)||(1041-1109)
[»] chr2 (46 HSPs)
chr2 (71-132)||(2331802-2331863)
chr2 (76-133)||(12668416-12668475)
chr2 (290-401)||(12447568-12447679)
chr2 (36-132)||(19573986-19574078)
chr2 (96-134)||(21374714-21374752)
chr2 (80-134)||(21782817-21782871)
chr2 (86-132)||(28412358-28412404)
chr2 (68-130)||(36409614-36409676)
chr2 (68-134)||(30717515-30717583)
chr2 (95-134)||(28677915-28677954)
chr2 (68-131)||(37419752-37419817)
chr2 (96-134)||(39323270-39323308)
chr2 (68-134)||(11223848-11223916)
chr2 (96-133)||(18841028-18841065)
chr2 (95-132)||(23921261-23921298)
chr2 (37-134)||(34691770-34691858)
chr2 (37-134)||(34714182-34714270)
chr2 (95-132)||(40361768-40361805)
chr2 (68-134)||(44860326-44860394)
chr2 (96-132)||(15972881-15972917)
chr2 (36-134)||(21616768-21616864)
chr2 (96-132)||(30404865-30404901)
chr2 (80-133)||(36756341-36756396)
chr2 (85-134)||(42832278-42832329)
chr2 (74-133)||(2665881-2665940)
chr2 (85-132)||(4332934-4332981)
chr2 (91-134)||(18276527-18276570)
chr2 (66-134)||(18420417-18420487)
chr2 (36-83)||(19536361-19536408)
chr2 (85-132)||(30298451-30298498)
chr2 (68-112)||(35056896-35056942)
chr2 (68-132)||(36281693-36281759)
chr2 (96-134)||(2438734-2438772)
chr2 (68-133)||(4207864-4207930)
chr2 (85-132)||(5473336-5473385)
chr2 (37-83)||(18255945-18255991)
chr2 (85-134)||(1327984-1328033)
chr2 (68-134)||(4882681-4882749)
chr2 (96-133)||(12940950-12940987)
chr2 (96-133)||(15657871-15657908)
chr2 (68-134)||(18889576-18889644)
chr2 (96-133)||(30335424-30335461)
chr2 (96-132)||(1886893-1886929)
chr2 (98-130)||(11308021-11308053)
chr2 (95-134)||(29664015-29664055)
chr2 (36-72)||(42511322-42511358)
[»] scaffold0044 (1 HSPs)
scaffold0044 (66-131)||(53189-53256)
[»] scaffold0223 (1 HSPs)
scaffold0223 (36-134)||(20178-20279)
[»] scaffold0003 (1 HSPs)
scaffold0003 (68-134)||(241600-241668)
[»] scaffold0168 (3 HSPs)
scaffold0168 (36-132)||(21051-21149)
scaffold0168 (36-97)||(21217-21278)
scaffold0168 (36-97)||(21346-21407)
[»] chr4 (38 HSPs)
chr4 (85-133)||(54580025-54580075)
chr4 (79-134)||(56257939-56257994)
chr4 (96-134)||(2361990-2362028)
chr4 (96-134)||(11596367-11596405)
chr4 (96-134)||(21945509-21945547)
chr4 (68-134)||(22234875-22234944)
chr4 (96-134)||(28964263-28964301)
chr4 (96-134)||(29205450-29205488)
chr4 (96-134)||(51701264-51701302)
chr4 (95-132)||(24343515-24343552)
chr4 (68-134)||(30982863-30982931)
chr4 (78-134)||(16184823-16184879)
chr4 (85-133)||(17425393-17425441)
chr4 (69-134)||(30838216-30838283)
chr4 (68-132)||(7012074-7012140)
chr4 (95-134)||(8423732-8423771)
chr4 (95-134)||(15029771-15029810)
chr4 (91-134)||(16189715-16189758)
chr4 (96-134)||(3947781-3947819)
chr4 (69-131)||(21873359-21873421)
chr4 (69-131)||(21929220-21929282)
chr4 (96-134)||(23293001-23293039)
chr4 (94-132)||(32910559-32910597)
chr4 (95-133)||(36635331-36635369)
chr4 (96-134)||(37203270-37203308)
chr4 (95-133)||(37698719-37698757)
chr4 (68-134)||(847957-848025)
chr4 (95-132)||(903930-903967)
chr4 (85-130)||(2234260-2234305)
chr4 (96-133)||(14465090-14465127)
chr4 (95-132)||(22440614-22440651)
chr4 (93-130)||(24999054-24999091)
chr4 (95-132)||(40179650-40179687)
chr4 (96-132)||(6485626-6485662)
chr4 (77-134)||(12895110-12895169)
chr4 (36-80)||(18844423-18844467)
chr4 (90-130)||(26276018-26276058)
chr4 (36-72)||(28470448-28470484)
[»] scaffold0103 (1 HSPs)
scaffold0103 (96-134)||(51817-51855)
[»] scaffold0066 (1 HSPs)
scaffold0066 (96-134)||(33378-33416)
[»] scaffold0050 (1 HSPs)
scaffold0050 (85-132)||(70286-70335)
[»] scaffold0004 (1 HSPs)
scaffold0004 (96-134)||(92813-92851)
[»] scaffold0361 (1 HSPs)
scaffold0361 (96-133)||(14537-14574)
[»] scaffold0123 (1 HSPs)
scaffold0123 (68-134)||(44510-44578)
[»] scaffold0008 (1 HSPs)
scaffold0008 (68-134)||(263357-263425)
[»] scaffold0036 (1 HSPs)
scaffold0036 (68-133)||(9732-9799)
[»] scaffold0027 (2 HSPs)
scaffold0027 (96-132)||(46690-46726)
scaffold0027 (34-82)||(46731-46778)
[»] scaffold0376 (1 HSPs)
scaffold0376 (74-134)||(6318-6380)
[»] scaffold0136 (1 HSPs)
scaffold0136 (68-132)||(3834-3900)
[»] scaffold0722 (1 HSPs)
scaffold0722 (96-134)||(7047-7085)
[»] scaffold0652 (1 HSPs)
scaffold0652 (96-134)||(477-515)
[»] scaffold0049 (1 HSPs)
scaffold0049 (96-134)||(63779-63817)
[»] scaffold0020 (1 HSPs)
scaffold0020 (79-134)||(135308-135365)
[»] scaffold0171 (2 HSPs)
scaffold0171 (68-122)||(23529-23585)
scaffold0171 (77-122)||(23438-23485)
[»] scaffold0011 (1 HSPs)
scaffold0011 (96-133)||(17764-17801)
[»] scaffold0450 (1 HSPs)
scaffold0450 (36-64)||(8564-8592)
[»] scaffold0316 (1 HSPs)
scaffold0316 (68-132)||(16144-16208)
[»] scaffold0021 (1 HSPs)
scaffold0021 (96-132)||(130490-130526)
[»] scaffold0019 (1 HSPs)
scaffold0019 (68-134)||(71729-71799)
[»] scaffold0018 (1 HSPs)
scaffold0018 (96-132)||(192264-192300)


Alignment Details
Target: chr6 (Bit Score: 328; Significance: 0; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 193 - 567
Target Start/End: Complemental strand, 12696282 - 12695897
Alignment:
Q  193 cttcattatgattatgatgtgttatatcctaagataaatgatgaaggaaaaaagataacaggctattgtgactcagactcatgtggagataacgttgaaa 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12696282 cttcattatgattatgatgtgttatatcctaagataaatgatgaaggaaaaaagataataggctattgtgactcagactcatgtggagataacgttgaaa 12696183  T
Q  293 gaaggagcaaaatgggaaacatgttcaaaattttcaactcaccattctcccggagttcaaagaaacaaacagttgtaccactgtcaacttgtgaagttga 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12696182 gaaggagcaaaatgggaaacatgttcaaaattttcaactcaccattctcccggagttcaaagaaacaaacagttgtagcactgtcaacttgtgaagttga 12696083  T
Q  393 atacatatcgcct-----------atgataaggattatggttacaataacttctacttgaaatgcagataggtgtaggagaacaaattgagttgttggtg 481  Q
    |||||||||||||           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12696082 atacatatcgccttgcaatgcaacatgataaggattatggttacaataacttctacttgaaatgaagataggtgtaggagaacaaattgagttgttggtg 12695983  T
Q  482 gaaaataaatacgctatcaacgttgcaagggatcccatagctcatgggaggagcaagcagatatagaccgaataccatattcttcg 567  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  12695982 gaaaataaatacgctatcaacgttgcaagggatcccatagctcatgggaggagcaagcagatatagaccgaataccactttcttcg 12695897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 8805524 - 8805625
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgaca---ccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||||||| ||||| ||||||| ||    | ||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattatgtgattttctcaaattatta 8805623  T
Q  133 gc 134  Q
    ||    
T  8805624 gc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 16766771 - 16766703
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||||| |||||||||||||||||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 16766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 9107355 - 9107423
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||||||| |  |||||||||||||| ||| |||||||||||||||||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagc 9107423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 1532312 - 1532246
Alignment:
Q  67 atgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| |||||| |||| ||||| ||| |||||||||||||||||||||||||| |||||||||||||    
T  1532312 atgtctgacaccaacacgacacc-acatataattacactgaattatgtaattttatcaaattattagc 1532246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 31579229 - 31579276
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  31579229 acaccgacacataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 7977845 - 7977883
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7977845 taattacactgaattatgtaattttttcaaattattagc 7977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 9522963 - 9522898
Alignment:
Q  70 tccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||| |||||||||| |  |||||||||||||||||| ||||||| ||||||||||    
T  9522963 tccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 12696368 - 12696330
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12696368 taattacactgaattatgtaattttttcaaattattagc 12696330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 34290064 - 34290129
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||| ||| |  |||||||||||    
T  34290064 tgtcggacactgacacgacaccgacacataattacactgaattatgtgattctcgcaaattattag 34290129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 2117175 - 2117083
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||||||  ||||| ||||||||||| |||||| ||    ||  |||||| || |||||||||| ||||||||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgaca-cgacacgac----acttataattgcattgaattatgtgattttttcaaattattag 2117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 34225817 - 34225861
Alignment:
Q  89 cgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||||||||||  ||||||||||||||||||    
T  34225817 cgacacataattacactgaattatgcgattttttcaaattattag 34225861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 5970093 - 5970159
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||| ||||| |||  |  |||||||||||||||||| |||||||||||||||||    
T  5970093 tgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 7086904 - 7086801
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgaca---ccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattat 130  Q
    |||||||||||||| |||||||| ||||| ||||||  ||    | ||||| |||||||||||||  |||||||| |||||||| ||||| |||||||||    
T  7086904 ctatgaagcacggaaactcctcggattaggcatgtctcacgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattat 7086805  T
Q  131 tagc 134  Q
    ||||    
T  7086804 tagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 9025490 - 9025547
Alignment:
Q  79 gacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| |||||||||||||  ||||||||||||||||| ||||| |||||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 17435243 - 17435205
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  17435243 taattacactgaattatgtaattttttaaaattattagc 17435205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 28715339 - 28715301
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  28715339 taattacactgaattatgtcattttttcaaattattagc 28715301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 7569182 - 7569219
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7569182 ataattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 10770689 - 10770726
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  10770689 taattacactgaattatgtgattttttcaaattattag 10770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 26562759 - 26562695
Alignment:
Q  72 cgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||| ||| |||||||||  ||||||||||||||||| ||||| ||||||| |||||    
T  26562759 cgacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagc 26562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 29049946 - 29049893
Alignment:
Q  79 gacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||| ||||| |||||| |||||| |||||||||||||||| |||||||||||    
T  29049946 gacacaacaccaacacatgattacattgaattatgtaattttctcaaattatta 29049893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 31384964 - 31384927
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  31384964 taattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 34595178 - 34595141
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  34595178 taattacactgaattatgtgattttttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 6349752 - 6349788
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||| ||||||||||||||||||||||||||||    
T  6349752 taattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 7265595 - 7265646
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||  ||||||||||||||||| ||||| |||||||||||||    
T  7265595 acaccgacacatataattacactgaattatgtgattttctcaaattattagc 7265646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 8365504 - 8365571
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||| |||||||| |||||||||| |  |||||||| ||||||||| || |||||||||||||||    
T  8365504 tgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattag 8365571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 9195739 - 9195806
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattag 133  Q
    |||| |||||| |||| |||||||||||||  |||||||| |||||||| ||||| ||||||||||||    
T  9195739 tgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 16388247 - 16388283
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatt 131  Q
    |||||||||||||||||||| ||||||||||||||||    
T  16388247 ataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 34073337 - 34073400
Alignment:
Q  73 gacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| |||||||| ||||  ||||||||||||||||  ||||| |||||||||||||    
T  34073337 gacaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattattagc 34073400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 5732474 - 5732521
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 5732521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 9617508 - 9617442
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||  || |||||||||||||  |||||| |||||||||| ||||| |||||||||||    
T  9617508 tgtccgacaccgcgacgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 10842608 - 10842538
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||     |||||||||  |||||||| |||||||| |||||||||||||||||||    
T  10842608 catgtccgacaccgacacgtgttcgacacatatgattacactaaattatgtgattttttcaaattattagc 10842538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 16111743 - 16111809
Alignment:
Q  69 gtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||| ||||||| |||| |||||  ||||||||||| ||||||||||||| |||||| ||||||    
T  16111743 gtccgactccgacacgacactgacacctataattacactaaattatgtaatttattcaaactattag 16111809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 19040397 - 19040358
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  19040397 ataattacactgaattatgtgattttctcaaattattagc 19040358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 7151457 - 7151419
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  7151457 ataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 17841604 - 17841642
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagc 17841642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 31959203 - 31959165
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  31959203 taattacactgcattatgtgattttttcaaattattagc 31959165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  34 aactatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 1681802 - 1681765
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||| || ||||||||||||||||||    
T  1681802 taattacactgaattacgtgattttttcaaattattag 1681765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 6898296 - 6898333
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  6898296 taattacacttaattatgtaatttgttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 7801171 - 7801208
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  7801171 taattacgctgaattatgtgattttttcaaattattag 7801208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 7973761 - 7973665
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagcc---atgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaatta 129  Q
    |||||||||||| ||||| |||||||||| |   |||| ||| ||| |||| ||||||||||  ||||||||||| |||||||||||||||| ||||||    
T  7973761 ctatgaagcacg-acacttctcgaattaggcgtgatgttcgatacc-acacgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 8776988 - 8777025
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  8776988 taattacactgaattttgtgattttttcaaattattag 8777025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 15489747 - 15489784
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  15489747 taattacattgaattgtgtaattttttcaaattattag 15489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 16833352 - 16833315
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  16833352 taattacactgaagtatgtgattttttcaaattattag 16833315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 17341678 - 17341715
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  17341678 ataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 34447348 - 34447409
Alignment:
Q  71 ccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||| | || ||||||||||| ||||||||| |||||| | ||||| |||||||||||    
T  34447348 ccgacaccaagacgacaccgacacaaaattacactaaattatatgattttatcaaattatta 34447409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 6327533 - 6327569
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||| |||||| |||||||||||||||||||    
T  6327533 taattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 7938173 - 7938122
Alignment:
Q  85 acaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||  ||||||||||| |||||| | |||||||||||||||||||    
T  7938173 acaccgacacttataattacactaaattatatgattttttcaaattattagc 7938122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 8714054 - 8713987
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgt-aattttttcaaattatta 132  Q
    |||||||||||||||| ||||| |||  |  |||||||||||||||||| | ||||||||||||||||    
T  8714054 tgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattatta 8713987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 8931592 - 8931655
Alignment:
Q  73 gacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| ||| |||||||||  |||| |||||||||||| ||||| ||||||| |||||    
T  8931592 gacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagc 8931655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 20576623 - 20576686
Alignment:
Q  73 gacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||| |||||| ||||| ||||  ||||||||||||||||||| |||||| || ||||||||||    
T  20576623 gacatcgacacgacaccaacacttataattacactgaattatgcaattttctcgaattattagc 20576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 25038086 - 25038122
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||| |||||||||||||| |||||||||||    
T  25038086 taattacactaaattatgtaattttctcaaattatta 25038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 26178682 - 26178733
Alignment:
Q  84 cacaccgacacata--attacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||  |||||||| |||||||| ||||| ||||||||||||    
T  26178682 cacaccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 28862196 - 28862129
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaatt-atgtaattttttcaaattatta 132  Q
    |||| |||||| |||| |||||||||||||  ||||||||||||| |||| ||||| |||||||||||    
T  28862196 tgtcagacaccaacacgacaccgacacatatgattacactgaattaatgtcattttatcaaattatta 28862129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 33001291 - 33001342
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||  |||||| | |||||||| |||||||||||||||||||    
T  33001291 acaccgacacatataattacatttaattatgtgattttttcaaattattagc 33001342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 8e-44; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 38816618 - 38816748
Alignment:
Q  5 tctccaagaatatcacgattcacgaatataactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattacac 104  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38816618 tctccaacactatcacgattcacgaatataactatgaatcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattatac 38816717  T
Q  105 tgaattat-gtaattttttcaaattattagc 134  Q
    |||| ||| |  ||||| |||||||||||||    
T  38816718 tgaaatatagcgattttctcaaattattagc 38816748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 22423764 - 22423864
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgac--acataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||  | ||||||| | |||||||||| ||||| |||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattatta 22423863  T
Q  133 g 133  Q
    |    
T  22423864 g 22423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 401
Target Start/End: Complemental strand, 36072897 - 36072807
Alignment:
Q  311 acatgttcaaaattttcaactcaccattctcccggagttcaaagaaacaaacagttgtaccactgtcaacttgtgaagttgaatacatatc 401  Q
    ||||||||||||||||||||||||   | |||  || ||||||||||||||||  |||| |||| ||||||||||||||||||| ||||||    
T  36072897 acatgttcaaaattttcaactcactgatatccttgaattcaaagaaacaaacaactgtagcactatcaacttgtgaagttgaattcatatc 36072807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 36838650 - 36838549
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccga-caccacaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||| ||||||||| | ||||| | |||| |||||| | ||| |||||||||||||  |||||||| |||||||||||||| |||||||||||    
T  36838650 ctatgaagcacagacactccttggattaggcgtgtcggacaccaaacacgacaccgacacatataattacactaaattatgtaattttctcaaattatta 36838551  T
Q  133 gc 134  Q
    ||    
T  36838550 gc 36838549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 39698615 - 39698547
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||| ||||| |  |||||||||||||||||| |||||||||||||||||||    
T  39698615 tgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagc 39698547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 37328829 - 37328894
Alignment:
Q  68 tgtccgacaccgacaccacaccgacaca--taattacactgaattatgtaattttttcaaattatt 131  Q
    |||||||||||||||| |||||||||||  ||||||||||||||| ||| |||||| |||||||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatt 37328894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 43001844 - 43001806
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagc 43001806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 3966577 - 3966509
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| ||||| |||||||||||||  ||||||||||||| ||| ||||| |||||||||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagc 3966509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 7677779 - 7677711
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||| ||||||||||| |||||||||| |  |||| ||||||||||||| |||||||||||||||||||    
T  7677779 tgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagc 7677711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 21522824 - 21522756
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||||||  |  |||||||||||||||||| ||||||| |||||||||||    
T  21522824 tgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagc 21522756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 21533390 - 21533322
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||||||  |  |||||||||||||||||| ||||||| |||||||||||    
T  21533390 tgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagc 21533322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 41995543 - 41995478
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||| ||  ||||||||| |||||||| |||||||||| |||||||| |||||||||    
T  41995543 tgtccgacaccgatacggcaccgacacttaattacattgaattatgtgattttttcgaattattag 41995478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 21542104 - 21542037
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||||| || |||| ||||||||||    
T  21542104 tgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattag 21542037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 9929720 - 9929649
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattacactgaatta 111  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||    ||| |||||||||||||||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgac----acatataattacactgaatta 9929649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 13287354 - 13287450
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||  |||||||||  ||||| | |||||||||  ||||| |||||||||| |  | |||||||||||||||| |||||||||||||||||    
T  13287354 tatgaagcacatacactcctcagattaggcgtgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 21191071 - 21191109
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  21191071 taattacactgaattatgtgattttttcaaattattagc 21191109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 21576760 - 21576798
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  21576760 taattacactgaattatgtgattttttcaaattattagc 21576798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 27932279 - 27932241
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagc 27932241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 434 - 540
Target Start/End: Complemental strand, 36072763 - 36072657
Alignment:
Q  434 ctacttgaaatgcagataggtgtaggagaacaaattgagttgttggtggaaaataaatacgctatcaacgttgcaagggatcccatagctcatgggagga 533  Q
    |||||| ||||| ||||| |||||||||| |||||| || | |||||||| |||||||  |||  |||| ||| |||| ||| || ||||||| ||||||    
T  36072763 ctacttaaaatgaagataagtgtaggagagcaaattaagctattggtggacaataaatttgctgacaaccttgtaaggaatctcaaagctcataggagga 36072664  T
Q  534 gcaagca 540  Q
    |||||||    
T  36072663 gcaagca 36072657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 41633779 - 41633741
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  41633779 taattacactgaattatgtaaatttttcaaattattagc 41633741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 6247666 - 6247629
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  6247666 taattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 18592147 - 18592079
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||| ||||||  |||||| |||||||||||||||| | ||| |||||||    
T  18592147 tgtccgacaccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagc 18592079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 41794068 - 41794129
Alignment:
Q  72 cgacaccgacaccacaccgacacataattacactgaattatgt-aattttttcaaattatta 132  Q
    ||||||| |||| | |||||||||||||||||||| ||||||| | ||||||||||||||||    
T  41794068 cgacaccaacacaataccgacacataattacactggattatgtgatttttttcaaattatta 41794129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 2419929 - 2419865
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    |||| |||||| ||||  ||| ||||||| ||||||||||||| ||||||||| |||||||||||    
T  2419929 tgtctgacaccaacacggcactgacacatgattacactgaattgtgtaattttctcaaattatta 2419865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 19552530 - 19552594
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    |||| ||||||||||| ||| |||||| ||  |||||| |||||||| |||||||||||||||||    
T  19552530 tgtctgacaccgacacgacatcgacacttatatacacttaattatgtgattttttcaaattatta 19552594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 24906316 - 24906352
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||| |||||||||||||||||    
T  24906316 taattacactgaattatgtcattttttcaaattatta 24906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 6471903 - 6471942
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  6471903 ataattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 22013459 - 22013420
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  22013459 ataattacactaaattatgtaatttttccaaattattagc 22013420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 4344784 - 4344750
Alignment:
Q  98 attacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||| |||||||||||||||||    
T  4344784 attacactgaattatgtcattttttcaaattatta 4344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 6326312 - 6326350
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagc 6326350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 8420071 - 8420033
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  8420071 taattacattgaattatgttattttttcaaattattagc 8420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 14674313 - 14674275
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagc 14674275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  34 aactatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 28588676 - 28588725
Alignment:
Q  85 acaccgacac--ataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||  |||||||||||||||||||| ||||| |||||||||||    
T  28588676 acaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 31084367 - 31084329
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  31084367 taattacattgaattatgtgattttttcaaattattagc 31084329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 38749557 - 38749614
Alignment:
Q  77 ccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    ||||||| ||||| |||||||  |||||| |||||||||| |||||||||||||||||    
T  38749557 ccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 40131666 - 40131628
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  40131666 ataattaaactgaattatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 42893404 - 42893366
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  42893404 taattacactggattatgtgattttttcaaattattagc 42893366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 5467992 - 5468029
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  5467992 ataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 19579775 - 19579707
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| ||||| |||||||||| |  |||| |||| |||||||| ||||| |||||||||||||    
T  19579775 tgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagc 19579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 6770598 - 6770550
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    |||| ||||||||| ||||||||||||||| ||||| | ||||||||||    
T  6770598 acactgacacataagtacactgaattatgtgattttcttaaattattag 6770550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 21351890 - 21351957
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    |||| ||||||||||  |||||||||| |  |||||||||||||||||| | |||||| |||||||||    
T  21351890 tgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattag 21351957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 30502390 - 30502441
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||  |||||||||||||| || ||||| |||||||||||||    
T  30502390 acaccgacacatataattacactgaattaagtgattttctcaaattattagc 30502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 30542733 - 30542784
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||  |||||||||||||| || ||||| |||||||||||||    
T  30542733 acaccgacacatataattacactgaattaagtgattttctcaaattattagc 30542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 41091243 - 41091310
Alignment:
Q  69 gtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||  ||||| ||| |||||||||  ||||||||||||||||| ||||| |||||| ||||||    
T  41091243 gtccgacattgacacgacatcgacacatataattacactgaattatgtgattttctcaaatcattagc 41091310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 25566949 - 25566847
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc--gacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatt 131  Q
    ||||||||||| ||||||||||| ||||| | |||||  |||||| |||| |||||||||| |  |||||||||||||||||| ||||||||||||||||    
T  25566949 ctatgaagcacagacactcctcggattaggcgtgtcccggacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 25566850  T
Q  132 agc 134  Q
    |||    
T  25566849 agc 25566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 15816114 - 15816181
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||| |||| ||||||||||  ||||||||||| |||||||| ||||||||||||||||||    
T  15816114 tgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattattag 15816181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 37283812 - 37283863
Alignment:
Q  83 ccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  37283812 ccacaccgacacataattacactgaattatgtgattttctcagattattagc 37283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 9383039 - 9382981
Alignment:
Q  73 gacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatt 131  Q
    ||||||||||| |||| |||||||||||||| ||||||||||| |||| ||||||||||    
T  9383039 gacaccgacacgacacagacacataattacattgaattatgtagttttctcaaattatt 9382981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 22652050 - 22651982
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||||||| |  ||||| | |||||||||| |||||||||||||||||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagc 22651982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 29510289 - 29510357
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||||||| |  ||||| |||||||| ||| |||||||||||||||||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagc 29510357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 2572041 - 2572108
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||| ||||| |||||||||| |  ||||||||| |||||||| ||||||||||||||||||    
T  2572041 tgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 7658508 - 7658470
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  7658508 ataattacactgaattatgtaattttctcaaattattag 7658470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 11927076 - 11927137
Alignment:
Q  73 gacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    |||||| |||| |||||||||||||  ||||||||||||||||| ||||| |||||||||||    
T  11927076 gacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 13203686 - 13203648
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  13203686 ataattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 34897180 - 34897091
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||||||    ||||||||| ||||||         | |||||||||||||||||||| ||||| |||||||||||||    
T  34897180 ctatgaagcacggacactcctcgaattacatgtgtccgacatcgacac---------atataattacactgaattatgtgattttctcaaattattagc 34897091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 4611608 - 4611540
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| ||||||||  |||||| |||||  ||||||||||||||||| ||||| |||||||||||||    
T  4611608 tgtccgataccgacacagcaccgagacatataattacactgaattatgttattttctcaaattattagc 4611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 4948696 - 4948659
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  4948696 taattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 3025596 - 3025557
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  3025596 ataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 7442889 - 7442851
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  7442889 taattacactgaattatgtaattttatgaaattattagc 7442851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 8343016 - 8342978
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  8343016 taattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 8343360 - 8343322
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  8343360 taattacactaaattatgtgattttttcaaattattagc 8343322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 14134744 - 14134706
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  14134744 ataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 22596038 - 22596000
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  22596038 taattacactgaattatgttatttttttaaattattagc 22596000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 29776108 - 29776042
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||   ||||||||| ||||||| ||||||||| || ||||| |||||||||||||    
T  29776108 tgtccgacactgacttaacaccgacatataattatactgaattacgtgattttctcaaattattagc 29776042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 30077402 - 30077440
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  30077402 taattacactgaattatgtgatgttttcaaattattagc 30077440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 36107730 - 36107688
Alignment:
Q  70 tccgacaccgacaccacaccgacacataattacactgaattat 112  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||    
T  36107730 tccgacacctacacgacaccgacacataattacattgaattat 36107688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 13436953 - 13437017
Alignment:
Q  72 cgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||| |||||||||| |   |||||  |||||||||| |||||||||||||||||||    
T  13436953 cgacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagc 13437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 25172683 - 25172751
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||  ||||| |||||||||||||  |||||| | || ||||||||||| |||||||||||||    
T  25172683 tgtccgacattgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagc 25172751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 28642449 - 28642416
Alignment:
Q  99 ttacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||| |||||||||||||||    
T  28642449 ttacactgaattatgtaaatttttcaaattatta 28642416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 36450769 - 36450806
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  36450769 taattacactgaattctgtgattttttcaaattattag 36450806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 41831958 - 41831991
Alignment:
Q  99 ttacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||| |||||||||||||||||    
T  41831958 ttacactgaattatgtgattttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 13844598 - 13844649
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||  |||||||| |||||||| ||||| |||||||||||||    
T  13844598 acaccgacacatataattacactcaattatgtgattttctcaaattattagc 13844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 18170497 - 18170529
Alignment:
Q  96 taattacactgaattatgtaattttttcaaatt 128  Q
    |||||||| ||||||||||||||||||||||||    
T  18170497 taattacattgaattatgtaattttttcaaatt 18170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 18634065 - 18634097
Alignment:
Q  96 taattacactgaattatgtaattttttcaaatt 128  Q
    |||||||| ||||||||||||||||||||||||    
T  18634065 taattacattgaattatgtaattttttcaaatt 18634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 20873113 - 20873077
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||| |||||||| |||||||||||||||||    
T  20873113 taattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 24362192 - 24362255
Alignment:
Q  73 gacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| |||  ||||||||  ||||||||||||||||| ||| | |||||||||||||    
T  24362192 gacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagc 24362255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 24669477 - 24669441
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||||||||  |||||||||||    
T  24669477 taattacactgaattatgtaatttcctcaaattatta 24669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 29447095 - 29447162
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||  |||||||||| |  | ||||| |||||||||| ||||| ||||||||||||    
T  29447095 tgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattag 29447162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 34223012 - 34222953
Alignment:
Q  77 ccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||| |||||||||||  |||||||| |||||||| ||||| | |||||||||||    
T  34223012 ccgacaccataccgacacatataattacacttaattatgtgattttattaaattattagc 34222953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 38487228 - 38487268
Alignment:
Q  91 acacataattacactgaattatgtaattttttcaaattatt 131  Q
    ||||||||| ||||  |||||||||||||||||||||||||    
T  38487228 acacataatcacaccaaattatgtaattttttcaaattatt 38487268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 9e-19; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 44482343 - 44482240
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagc-----catgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaa 126  Q
    ||||||| ||||||||||||||||| ||||||     | |||||||||||||||| |||||||||||||  ||||||||||||||||| ||||| |||||    
T  44482343 aactatggagcacggacactcctcggattagctgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaa 44482244  T
Q  127 ttat 130  Q
    ||||    
T  44482243 ttat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 17754385 - 17754317
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataa--ttacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| ||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||||||    
T  17754385 tgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagc 17754317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 6612156 - 6612222
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||| |||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  6612156 tgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 1486703 - 1486762
Alignment:
Q  77 ccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| ||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagc 1486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 47989571 - 47989505
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||||| ||||||| |||||||||    
T  47989571 tgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 18190123 - 18190160
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18190123 taattacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 21038157 - 21038089
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||| ||| ||||  ||||||||||||||||||||||| | |||||||||||    
T  21038157 tgtccgacaccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattagc 21038089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 25361960 - 25361896
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattat 130  Q
    |||||||||||||||| |||| ||||||||  ||||||||||||||||| ||||| |||||||||    
T  25361960 tgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 25452152 - 25452201
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  25452152 acaccgacacataattacactgaattatgagattttctcaaattattagc 25452201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 89  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 9828118 - 9828051
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataa--ttacactgaattatgtaattttttcaaattattag 133  Q
    |||| ||||| ||||| ||||||||||||||  |||||||||||||||| ||||| ||||||||||||    
T  9828118 tgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 398779 - 398818
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  398779 ataattacactgaattatgtgattttttcaaattattagc 398818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 8010278 - 8010340
Alignment:
Q  74 acaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| ||| ||||||  ||||||| |||||||||| |||||||||||||||||||||    
T  8010278 acaccgacacaacatcgacacttataattatactgaattatataattttttcaaattattagc 8010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 113343 - 113305
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  113343 taattacactgaattatgtgattttttcaaattattagc 113305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 10572535 - 10572641
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaa 126  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  |||||||| ||||||||| ||||| |||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaa 10572634  T
Q  127 ttattag 133  Q
    |||||||    
T  10572635 ttattag 10572641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 21378622 - 21378584
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  21378622 taattacactgaattatgtaattttttcaatttattagc 21378584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 5376485 - 5376553
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||| |||||| |||||||||| |  |||||||||||||||||| ||||| | |||||||||||    
T  5376485 tgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagc 5376553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 9033015 - 9033060
Alignment:
Q  89 cgacacataattacactgaattatgt-aattttttcaaattattag 133  Q
    |||||||||||||||||||||||||| | |||||||||||||||||    
T  9033015 cgacacataattacactgaattatgtgatttttttcaaattattag 9033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 9629885 - 9629953
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||| |||||| ||||||||||  ||||| |||||||||||| | ||||| |||||||||||||    
T  9629885 tgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagc 9629953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 14248883 - 14248837
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  14248883 acactgacacataattacactgaattatg--attttttcaaattattag 14248837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 24577201 - 24577238
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  24577201 taattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 26238101 - 26238165
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata-attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||   || |||||||| ||||||||||||||||| ||||| |||||||||||||    
T  26238101 tgtccgacaccgacac---actgacacatatattacactgaattatgttattttctcaaattattagc 26238165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 5944357 - 5944287
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaa--ttttttcaaattattagc 134  Q
    |||||| || |||||| ||||||||||  |||||||||||||||||||| |  ||||||||||||||||||    
T  5944357 tgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagc 5944287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 31694695 - 31694765
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaa--ttttttcaaattattagc 134  Q
    |||||||||||||||| ||||||||||   |||||| |||||||||||| |  ||||||||||||||||||    
T  31694695 tgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagc 31694765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 36878518 - 36878467
Alignment:
Q  85 acaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||  |||||||||||||||||||| ||||| |||||||||||||    
T  36878518 acaccgacacctataattacactgaattatgtgattttctcaaattattagc 36878467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 40258948 - 40258984
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||| |||||||||||||||||    
T  40258948 taattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 2288171 - 2288218
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||| |||||||||| ||||| | |||||||||    
T  2288171 acaccgacacataattacattgaattatgtgattttcttaaattatta 2288218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 2851069 - 2851027
Alignment:
Q  91 acacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  2851069 acacataatt-cactgaattatgtaattttatcaaattattagc 2851027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 5898280 - 5898319
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  5898280 ataattacactgaattatgtgattttttcagattattagc 5898319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 16927199 - 16927238
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  16927199 ataattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 18337373 - 18337338
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatt 131  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18337373 taattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 34371785 - 34371720
Alignment:
Q  70 tccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||| |||| |||||||||||||  ||||||||||||||||| ||||| || ||||||||||    
T  34371785 tccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctc-aattattagc 34371720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 40181916 - 40181877
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  40181916 ataattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 1864882 - 1864931
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||  ||||||||||||||||| ||||| |||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 7918225 - 7918263
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  7918225 ataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 20157346 - 20157403
Alignment:
Q  79 gacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| |||||||||||||  ||||||||||||||||| ||||| ||| |||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagc 20157403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 22515902 - 22515940
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  22515902 taattacactaaattatgtgattttttcaaattattagc 22515940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 23636051 - 23636096
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaatt 128  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||    
T  23636051 acaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 23738722 - 23738684
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  23738722 taattgcactgaattatgtgattttttcaaattattagc 23738684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 31015087 - 31015049
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  31015087 taattacactgaattatgtgattttctcaaattattagc 31015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 31672910 - 31672948
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| || |||||||||||||||||||    
T  31672910 taattacactgaattaagtgattttttcaaattattagc 31672948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 34298481 - 34298443
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  34298481 ataattacactgaattatgtgattttctcaaattattag 34298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 37055871 - 37055909
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  37055871 taattacactaaattatgtaattttctcaaattattagc 37055909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 38078676 - 38078714
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  38078676 taattacattgaattatgtgattttttcaaattattagc 38078714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 41877485 - 41877523
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  41877485 taattacactaaattatgtaattttctcaaattattagc 41877523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 48450602 - 48450640
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  48450602 taattacactaaattatgttattttttcaaattattagc 48450640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 1705007 - 1705044
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  1705007 taattaccctgaattatgtgattttttcaaattattag 1705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 12443476 - 12443513
Alignment:
Q  97 aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagc 12443513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 22794092 - 22794129
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  22794092 ataattacactgtattatgtcattttttcaaattatta 22794129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 22881631 - 22881668
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  22881631 taattacactaaattatgtgattttttcaaattattag 22881668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 28674845 - 28674808
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  28674845 ataattatactgaattatgtaattttctcaaattatta 28674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 42359464 - 42359501
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  42359464 taattacactgaattttgtgattttttcaaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 10233323 - 10233260
Alignment:
Q  73 gacaccgacacca-caccgacacata--attacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||| ||| ||||||||  ||||||||||||||||| ||||| |||| |||||||    
T  10233323 gacaccgacaccaacacagacacatataattacactgaattatgtgattttctcaatttattag 10233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 30847737 - 30847773
Alignment:
Q  98 attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||| |||||||||| |||||||||||||||||||    
T  30847737 attacattgaattatgtcattttttcaaattattagc 30847773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 32461449 - 32461515
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||| ||||| |||| |  ||||||| | |||||||| ||||||||||||||||||    
T  32461449 tgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgattttttcaaattattag 32461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 34712377 - 34712436
Alignment:
Q  77 ccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| |||| ||||||||  |||||||| |||||||| ||||| |||||||||||||    
T  34712377 ccgacacgacactgacacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 4e-18; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 11700909 - 11700811
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||||| |||||||||| ||||| |||||||||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattatgtgattttgtcaaattatta 11700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 24339716 - 24339648
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||||| |||||||||||||||||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 24339648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 29787354 - 29787422
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| |||||||||  ||||| |||||||||||||||||||||||| ||||| |||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattatgtgattttctcaaattattagc 29787422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 26033444 - 26033514
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||| ||||||||||| | |||||||| |  |||||||||||||||||| |||||||||||||||||||    
T  26033444 catgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 7328639 - 7328744
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attacactgaattatgtaattttttcaaatt 128  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||||||| |||||||| ||||| |||||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattatgttattttctcaaatt 7328738  T
Q  129 attagc 134  Q
    ||||||    
T  7328739 attagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 30731104 - 30731046
Alignment:
Q  73 gacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatt 131  Q
    |||||| |||| ||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattatgtgattttctcaaattatt 30731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 9933347 - 9933282
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||| |||| ||||||||| |  |||||| ||||| ||||||||||||||||||    
T  9933347 tgtccgacaccgacacgacactgacacataagtttactgaaatatgtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 32308194 - 32308126
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| |||||||||| |||| ||||||||  ||||||||||||||||| ||||| |||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagc 32308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 11072362 - 11072306
Alignment:
Q  76 accgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||| ||||||||||||||||| | |||||||| || ||||||||||||||||    
T  11072362 accgacacgacaccgacacataattatattgaattatatatttttttcaaattatta 11072306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 15902896 - 15902830
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    ||||||| |||||||| |||||||||||||  |||||||| |||||||| ||||| |||||||||||    
T  15902896 tgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 13770735 - 13770697
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  13770735 taattacactgaattatgtaatttttttaaattattagc 13770697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 18013088 - 18013126
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  18013088 ataattacactgaattatgtaatttttttaaattattag 18013126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 21880196 - 21880158
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  21880196 taattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 25481946 - 25481908
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagc 25481908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 30813856 - 30813818
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  30813856 taattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 2424661 - 2424620
Alignment:
Q  93 acataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  2424661 acataattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 12289165 - 12289120
Alignment:
Q  89 cgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||||    
T  12289165 cgacacataattccactgaattatgtgattttctcaaattattagc 12289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 27945085 - 27945048
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  27945085 taattacactgaattatgtaattttctcaaattattag 27945048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 5409830 - 5409889
Alignment:
Q  77 ccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| |||||||||| |  |||| ||||||||||||| |||||||||||||||||||    
T  5409830 ccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagc 5409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 11272571 - 11272637
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaat--tatgtaattttttcaaattat 130  Q
    |||||||||||||||| ||||||||||   ||||||||||||||  ||||| |||||||||||||||    
T  11272571 tgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 11665429 - 11665492
Alignment:
Q  72 cgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||  ||| ||||||  ||||||| |||||||||||| ||||||||||||||||||    
T  11665429 cgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 9408319 - 9408385
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatta 132  Q
    |||| |||||||| || |||||||||| |  ||||||||| |||||||| |||||||||||||||||    
T  9408319 tgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 22200532 - 22200599
Alignment:
Q  65 ccatgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||| |||| |||   ||||||||||||| ||||||||||||||| |  |||||||||    
T  22200532 ccatgtccgacaccaacacaacattaacacataattacattgaattatgtaatttgtctaaattatta 22200599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 22237289 - 22237222
Alignment:
Q  65 ccatgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||| |||| |||   ||||||||||||| ||||||||||||||| |  |||||||||    
T  22237289 ccatgtccgacaccaacacaacattaacacataattacattgaattatgtaatttgtctaaattatta 22237222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 128
Target Start/End: Complemental strand, 4248253 - 4248223
Alignment:
Q  98 attacactgaattatgtaattttttcaaatt 128  Q
    |||||||||||||||||||||||||||||||    
T  4248253 attacactgaattatgtaattttttcaaatt 4248223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 7438775 - 7438714
Alignment:
Q  73 gacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||  |||||||||| |  ||||||| |||||||||| |||||||||||||||||    
T  7438775 gacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 11890932 - 11890970
Alignment:
Q  94 cataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  11890932 cataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 13300509 - 13300417
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacaca--taattacactgaattatgtaattttttcaaattatt 131  Q
    |||||||||||||||||||||||||         ||| |||||||||||  ||||||| ||   ||||||||||||||||| | ||||||||||||||||    
T  13300509 aactatgaagcacggacactcctcg---------tgttcgacaccgacatgacaccgagactggtaattacactgaattatatgattttttcaaattatt 13300419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 18039067 - 18039006
Alignment:
Q  74 acaccgacaccacaccgacacat--aattacactgaattatgt-aattttttcaaattatta 132  Q
    |||||||||| |||||||||| |  |||||||||||||||||| | ||||||||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 24105722 - 24105684
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  24105722 taattacactgaatcatgcaattttttcaaattattagc 24105684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 28155614 - 28155576
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  28155614 taattacaccgaattatgtaattttctcaaattattagc 28155576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 3991368 - 3991331
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  3991368 taattatactgaattatgtgattttttcaaattattag 3991331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 5954291 - 5954254
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  5954291 taattacactagattatgtaattttttcaaattattag 5954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 8056959 - 8056995
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||||||||||| |||||||||    
T  8056959 ataattacactgaattatgtaatttttt-aaattatta 8056995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 8160486 - 8160422
Alignment:
Q  72 cgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||| | ||| |||||||  |||||||| |||||||||||||| | |||||||||||    
T  8160486 cgacaccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagc 8160422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 133
Target Start/End: Complemental strand, 8234186 - 8234153
Alignment:
Q  100 tacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||| ||||||||||||||||||    
T  8234186 tacactgaattatgttattttttcaaattattag 8234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 14729748 - 14729707
Alignment:
Q  93 acataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| || ||||| |||||||||||||    
T  14729748 acataattacactgaattacgtgattttctcaaattattagc 14729707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  35 actatgaagcacggacactcctcgaattag 64  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 23128644 - 23128712
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    ||||| ||||||| |||| |||||||||||||  ||||||||||||||| |  |||| |||||||||||    
T  23128644 catgttcgacaccaacacaacaccgacacatatgattacactgaattatatggttttctcaaattatta 23128712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 27732253 - 27732290
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||||||||| | |||||||||    
T  27732253 ataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 44021016 - 44020983
Alignment:
Q  99 ttacactgaattatgtaattttttcaaattatta 132  Q
    ||||| ||||||||||||||||||||||||||||    
T  44021016 ttacattgaattatgtaattttttcaaattatta 44020983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 6630897 - 6630964
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||| |||| ||| |||||||||  |||||||||||||| || | ||| ||||||||||||    
T  6630897 tgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattattag 6630964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 9778565 - 9778510
Alignment:
Q  77 ccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattat 130  Q
    ||||||| |||||||||| |  ||||| |||||||||||| |||||||||||||||    
T  9778565 ccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 15680928 - 15680900
Alignment:
Q  36 ctatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattag 15680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 19992058 - 19992007
Alignment:
Q  85 acaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||  |||||||||||||| ||||| ||||| |||||||||||||    
T  19992058 acaccgacacttataattacactgaaatatgtgattttctcaaattattagc 19992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 20549848 - 20549797
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||  |||||||||||||| || ||||| |||||||||||||    
T  20549848 acaccgacacatataattacactgaattacgtgattttctcaaattattagc 20549797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 22602705 - 22602756
Alignment:
Q  78 cgacaccacaccgacacata--attacactgaattatgtaattttttcaaat 127  Q
    |||||| |||||||||||||  ||||||||||||||||| ||||| ||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 26733361 - 26733310
Alignment:
Q  85 acaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||  ||||| |||||||||||| ||||| |||||||||||||    
T  26733361 acaccgacacatttaattagactgaattatgtgattttgtcaaattattagc 26733310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 35862007 - 35861971
Alignment:
Q  97 aattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  35862007 aattacattgaattatgtgattttttcaaattattag 35861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 8039818 - 8039888
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||| |||||||||||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagc 8039888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 11252033 - 11251984
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  11252033 acaccgacacataattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 25064981 - 25064915
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| |||| | ||| ||||||||||||||| |||||||| |||||||||||| ||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattatgtgattttttcaaatcattagc 25064915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 34910393 - 34910324
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||| || |||||||| | |  |||||||||||||||||| ||||||||||||||||||    
T  34910393 catgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 3618936 - 3618887
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  3618936 acaccgacacataattacgctgaattatggaattttctcaaattattagc 3618887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 7928507 - 7928456
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  7928507 acaccgacacatataattacactgaattatgtgattttttcaaattattagc 7928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 14209187 - 14209120
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||| |||| ||||| |  |||||||||||||||||| ||||||| ||||||||||    
T  14209187 tgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattag 14209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 25948881 - 25948940
Alignment:
Q  77 ccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| ||||| ||||  |||||||||||||||||||| |||||||||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 15812808 - 15812871
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatt 131  Q
    ||||||||||| |||| |||||| || ||||||||||||| |||||| ||||| ||||||||||    
T  15812808 tgtccgacaccaacacgacaccggcatataattacactgagttatgtgattttctcaaattatt 15812871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 27277844 - 27277891
Alignment:
Q  87 accgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  27277844 accgacacataattacactaaattatgtgattttctcaaattattagc 27277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 4987306 - 4987344
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagc 4987344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 26508154 - 26508116
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  26508154 taattacactgaattatgtgattttttcaaattattagc 26508116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 28918045 - 28918007
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  28918045 taattacactgaattatgtgattttttcaaattattagc 28918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 1509613 - 1509545
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||| |||||||| || |||||||||| |  ||||||||| |||||||| |||||||||||||||||||    
T  1509613 tgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 1509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 14979224 - 14979187
Alignment:
Q  97 aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||| |||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagc 14979187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 16789088 - 16789020
Alignment:
Q  66 catgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||| ||||| ||||| ||||  |||||||||||||||||| | ||||||| |||||||||    
T  16789088 catgtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 17005603 - 17005671
Alignment:
Q  67 atgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattag 133  Q
    ||||| |||||| |||| ||||||||||  |||||||||||||||||| | ||||| ||||||||||||    
T  17005603 atgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 9800106 - 9800047
Alignment:
Q  76 accgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattag 133  Q
    |||||||| |||||||||| ||  ||||||| ||||||||||||||| ||||||||||||    
T  9800106 accgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattag 9800047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 49651780 - 49651839
Alignment:
Q  77 ccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| |||||||||| |  ||||||| |||||||||| |||||||||||||||||||    
T  49651780 ccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagc 49651839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 3164043 - 3164078
Alignment:
Q  99 ttacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagc 3164078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 5441029 - 5441084
Alignment:
Q  79 gacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| |||||||||||||||| || |||||||||| ||||| ||||||| |||||    
T  5441029 gacacaacaccgacacataattccattgaattatgtgattttctcaaatttttagc 5441084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 10954994 - 10954959
Alignment:
Q  98 attacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10954994 attacactgaattatgtgattttttcaaattattag 10954959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 15796279 - 15796345
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||| |||| |||||||||  |  |||||||||||||||| | |||||||||||||||||    
T  15796279 tgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattatta 15796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 16192735 - 16192801
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    |||| ||||||||||| ||| | |||||||  ||||||||||||||||| ||||| |||||||||||    
T  16192735 tgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 20503509 - 20503474
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatt 131  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20503509 taattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 51206371 - 51206406
Alignment:
Q  99 ttacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||| |||||||||||||||||||    
T  51206371 ttacactgaattatgtgattttttcaaattattagc 51206406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtcc 72  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 4990982 - 4991020
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  4990982 taattacactgaattatgtaattttctcaaactattagc 4991020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  34 aactatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 134
Target Start/End: Complemental strand, 11155064 - 11155030
Alignment:
Q  100 tacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||| |||||||||||||||||    
T  11155064 tacactgaattatgtaaatttttcaaattattagc 11155030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 20691376 - 20691327
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||  ||||||||||||||||| ||||| |||||||||||    
T  20691376 acaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 21211334 - 21211296
Alignment:
Q  94 cataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  21211334 cataattacactgaactatgtaattttctcaaattatta 21211296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 21257001 - 21257039
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  21257001 taattatactgaattatgtgattttttcaaattattagc 21257039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 21479162 - 21479124
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  21479162 taattacactgaattgtgtgattttttcaaattattagc 21479124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 29508489 - 29508451
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  29508489 ataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 4201441 - 4201404
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  4201441 ataattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 14832173 - 14832105
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| |||||||| |||| ||||| |  ||||||| ||| |||||| |||||||||||||||||||    
T  14832173 tgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagc 14832105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 34185108 - 34185176
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||  ||||| |||||||||| |  |||||||||||||| ||| ||||||| |||||||||||    
T  34185108 tgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagc 34185176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 55401119 - 55401082
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  55401119 taattacactaaattatgtgattttttcaaattattag 55401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 8383314 - 8383263
Alignment:
Q  85 acaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||  |||||||||||||||||| | ||||| |||||||||||||    
T  8383314 acaccgacacttataattacactgaattatatgattttctcaaattattagc 8383263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 8412949 - 8412997
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    |||| |||||||||||| ||||||||||||  |||| ||||||||||||    
T  8412949 acacggacacataattaaactgaattatgtgtttttctcaaattattag 8412997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 10268501 - 10268537
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||| |||||||| |||||||||||||||||    
T  10268501 taattacactaaattatgtgattttttcaaattatta 10268537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 27505370 - 27505334
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcc 27505334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 28812589 - 28812522
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    |||| |||||| |||| |||||||||| |  || ||||||||||||||| |||| |||||||||||||    
T  28812589 tgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattag 28812522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 38731275 - 38731224
Alignment:
Q  85 acaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||  | ||||||||||||||| ||||||| |||||||||||    
T  38731275 acaccgacacatataactacactgaattatgtgattttttaaaattattagc 38731224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 41961635 - 41961702
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||| |||||||| |||||||||| |  |||||||| |||| |||| || |||||||||||||||    
T  41961635 tgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattag 41961702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 1109 - 1041
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataa--ttacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| ||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||||||    
T  1109 tgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagc 1041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 2331863 - 2331802
Alignment:
Q  71 ccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  2331863 ccgacactgacacgacaccgacacataaatacactgaattatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 12668416 - 12668475
Alignment:
Q  76 accgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  12668416 accgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattag 12668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 401
Target Start/End: Complemental strand, 12447679 - 12447568
Alignment:
Q  290 aaagaaggagcaaaatgggaaacatgttcaaaattttcaactcaccattctcccggagttcaaagaaacaaacagttgtaccactgtcaacttgtgaagt 389  Q
    ||||| |||||| |||| || |||| |||| ||||||||||| |||| ||||   ||||||||||||||| ||| || || ||||||||||||||||||     
T  12447679 aaagagggagcacaatgagatacattttcagaattttcaactaaccaatctcatagagttcaaagaaacatacaattctagcactgtcaacttgtgaagc 12447580  T
Q  390 tgaatacatatc 401  Q
    |  |||||||||    
T  12447579 tatatacatatc 12447568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 19574078 - 19573986
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||  ||||     |||||||||||||||||||| ||||| | |||||||||    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacacgccacc----tataattacactgaattatgttattttcttaaattatta 19573986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 21374714 - 21374752
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagc 21374752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 21782817 - 21782871
Alignment:
Q  80 acaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  21782817 acacgacaccggcacataattacactgaattatgtgattttctcaaattattagc 21782871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 28412404 - 28412358
Alignment:
Q  86 caccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  28412404 caccgacacataattacactgaattatgtgattttatcaaattatta 28412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 36409614 - 36409676
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattat 130  Q
    |||| |||||| |||  ||||||||||||||||||||| |||||||| |||||||||||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattatgtgattttttcaaattat 36409676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 30717515 - 30717583
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||| |||||| ||| |||||| |  |||||||||||||||||| |||||||||||||||||||    
T  30717515 tgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagc 30717583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 28677954 - 28677915
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  28677954 ataattacactgaattatgtgattttttcaaattattagc 28677915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 37419817 - 37419752
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatt 131  Q
    |||||||||||||||| |||||| ||| |  |||||||||||||| ||| ||||||||||||||||    
T  37419817 tgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 39323308 - 39323270
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagc 39323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 11223848 - 11223916
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| |||  |||||||||| |  |||||||||||||||||| ||||||||||| |||||||    
T  11223848 tgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttttcaaaatattagc 11223916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 18841028 - 18841065
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18841028 taattacacttaattatgtaattttttcaaattattag 18841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 23921298 - 23921261
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||||||||| |||||||||||    
T  23921298 ataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 34691770 - 34691858
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||         ||| |||||||||||||||||| | ||||| |||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgac---------acatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 34714182 - 34714270
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||         ||| |||||||||||||||||| | ||||| |||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgac---------acatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 40361768 - 40361805
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  40361768 ataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 44860394 - 44860326
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| ||||| |||| |||||||||||||  ||||||||||||||||  ||||| |||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagc 44860326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 15972917 - 15972881
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15972917 taattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 21616864 - 21616768
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||| || | ||||||| |||||| |||||     ||||  |||||||  ||||||||||||||||| ||||| ||||||||||||    
T  21616864 ctatgaagcacggacacttcttggattagccgtgtccggcaccgg----acacgtacacatataattacactgaattatgtgattttctcaaattattag 21616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 30404865 - 30404901
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||| |||||||||||||||||    
T  30404865 taattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 36756341 - 36756396
Alignment:
Q  80 acaccacaccgacac--ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||| ||||||||||  |||||||||||||||||||| |||| |||||||||||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattattag 36756396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 42832278 - 42832329
Alignment:
Q  85 acaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||  |||||||||||||| ||||||||||| |||||||||||||    
T  42832278 acaccgacacttataattacactgaaatatgtaattttctcaaattattagc 42832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 2665881 - 2665940
Alignment:
Q  74 acaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||| ||||| ||| ||||||||||| |||||||| ||||| | ||||||||||    
T  2665881 acaccgacacaacacccacatataattacactaaattatgtgattttctaaaattattag 2665940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 4332981 - 4332934
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||| |||||||||| |||||  ||||||||||    
T  4332981 acaccgacacataattacattgaattatgtgattttcccaaattatta 4332934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 18276570 - 18276527
Alignment:
Q  91 acacataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||| || ||||| |||||||||||||    
T  18276570 acacataattacactgaattaagtgattttctcaaattattagc 18276527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 18420417 - 18420487
Alignment:
Q  66 catgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||  ||||| ||||||||||  |||||| || |||||||||| ||||| |||||||||||||    
T  18420417 catgtccgacatggacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattagc 18420487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 30298451 - 30298498
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||| ||||||||||||||||| ||||| | |||||||||    
T  30298451 acaccgacacatgattacactgaattatgtcattttattaaattatta 30298498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 35056942 - 35056896
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaattat 112  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  35056942 tgtccgacaccgacacgacaccgacacatataattacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 36281759 - 36281693
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||| ||||||||| ||| |||||  |||||||| |||||||| ||||| |||||||||||    
T  36281759 tgtccgacacggacaccacatcgaaacatatgattacactaaattatgtgattttctcaaattatta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 2438734 - 2438772
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  2438734 taattacactgaattatgtgattttttgaaattattagc 2438772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 4207930 - 4207864
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac-ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||| | |||||||  ||||||||||| |||||||   |||||||||||||||||    
T  4207930 tgtccgacaccgacacgataccgacaatataattacactaaattatgcgcttttttcaaattattag 4207864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 5473385 - 5473336
Alignment:
Q  85 acaccgacacataat--tacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||  ||||| ||||||||| |||||||||||||||||    
T  5473385 acaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 1328033 - 1327984
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||| |||||||| | | ||||| |||||||||||||    
T  1328033 acaccgacacataattatactgaattttatgattttctcaaattattagc 1327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 4882681 - 4882749
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    |||| ||||||||||| ||| |||||| |  |||||||||||||||| | |||||||||||| ||||||    
T  4882681 tgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagc 4882749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 12940950 - 12940987
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  12940950 taattacactgaattatatgattttttcaaattattag 12940987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 15657908 - 15657871
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  15657908 taattacactgaattatgtgatttttacaaattattag 15657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 18889576 - 18889644
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||  |||  |||||||||||||  ||||||||||||||||| ||||| |||| ||||||||    
T  18889576 tgtccgacacaaacaagacaccgacacatatgattacactgaattatgtgattttctcaatttattagc 18889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 30335461 - 30335424
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  30335461 taattacactaaattatgtcattttttcaaattattag 30335424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 1886893 - 1886929
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||| |||||||||||| |||||||||||||||    
T  1886893 taattacattgaattatgtaaatttttcaaattatta 1886929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 11308021 - 11308053
Alignment:
Q  98 attacactgaattatgtaattttttcaaattat 130  Q
    ||||||||||||||||| |||||||||||||||    
T  11308021 attacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 29664055 - 29664015
Alignment:
Q  95 ataattacactgaattatgta-attttttcaaattattagc 134  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  29664055 ataattacactgaattatatatattttttcaaattattagc 29664015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 42511322 - 42511358
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 53256 - 53189
Alignment:
Q  66 catgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattatt 131  Q
    ||||||||||||||||||  |||||||||  |||||||||||||||||||| ||||| ||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 20279 - 20178
Alignment:
Q  36 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattat 130  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  |||||||||||||||||| |||||||||||||||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattat 20182  T
Q  131 tagc 134  Q
    ||||    
T  20181 tagc 20178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 241668 - 241600
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| |||| ||||||||||  ||||||||||| |||||||| |||||| ||||||||||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagc 241600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000005; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 21149 - 21051
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | ||||||||  ||||||| || || |||||| ||||| |||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattatta 21051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 97  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 97  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000005; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 54580025 - 54580075
Alignment:
Q  85 acaccgacac--ataattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  54580025 acaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 56257994 - 56257939
Alignment:
Q  79 gacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| |||| ||||||||||||||||||||||| | ||||| |||||||||||||    
T  56257994 gacacgacacagacacataattacactgaattatatgattttctcaaattattagc 56257939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 2361990 - 2362028
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  2361990 taattacactaaattatgtaattttttcaaattattagc 2362028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 11596367 - 11596405
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  11596367 taattacactgaattatgtgattttttcaaattattagc 11596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 21945547 - 21945509
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  21945547 taattacactgaattatgtcattttttcaaattattagc 21945509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 22234875 - 22234944
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgt-aattttttcaaattattagc 134  Q
    |||| ||||||||||| ||||||||||||  |||||||||||||||||| | |||||||||||| |||||    
T  22234875 tgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagc 22234944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 28964263 - 28964301
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  28964263 taattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 29205488 - 29205450
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  29205488 taattacactgaattatgtgattttttcaaattattagc 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 51701302 - 51701264
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  51701302 taattacactcaattatgtaattttttcaaattattagc 51701264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 24343552 - 24343515
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||||||||| |||||||||||    
T  24343552 ataattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 30982863 - 30982931
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||| ||||||||||| ||||||||||  |||||||||||||| ||||| ||||| |||||| ||||||    
T  30982863 tgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 16184879 - 16184823
Alignment:
Q  78 cgacaccacaccgacacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||| |||| ||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  16184879 cgacacgacacagacacataatttcactgaattgtgtgattttctcaaattattagc 16184823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 17425393 - 17425441
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattattag 133  Q
    |||| ||||||||||||||||||||||||  ||||| ||||||||||||    
T  17425393 acacagacacataattacactgaattatgcgattttctcaaattattag 17425441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 30838283 - 30838216
Alignment:
Q  69 gtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||| ||||| ||||||| ||  ||||||||||| |||||| ||||||| |||||||||||||    
T  30838283 gtccgacactgacacgacaccgatacttataattacactaaattatataattttatcaaattattagc 30838216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 7012140 - 7012074
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||| ||||||| || ||  || |||||||||||||| ||||| |||||||||||    
T  7012140 tgtccgacaccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattatta 7012074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 8423732 - 8423771
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  8423732 ataattacactgaattatgtgattttctcaaattattagc 8423771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 15029810 - 15029771
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  15029810 ataattacactgaattatgtgatattttcaaattattagc 15029771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 16189758 - 16189715
Alignment:
Q  91 acacataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||    
T  16189758 acacataattacactgaattatgtgattttctcaaatttttagc 16189715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 3947781 - 3947819
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  3947781 taattacactgaattatgcgattttttcaaattattagc 3947819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 21873359 - 21873421
Alignment:
Q  69 gtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatt 131  Q
    |||||| ||| |||| | |||| ||||||||| ||||||||||||| ||||| ||||||||||    
T  21873359 gtccgagaccaacacgataccggcacataatttcactgaattatgtgattttatcaaattatt 21873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 21929220 - 21929282
Alignment:
Q  69 gtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatt 131  Q
    |||||| ||| |||| | |||| ||||||||| ||||||||||||| ||||| ||||||||||    
T  21929220 gtccgagaccaacacgataccggcacataatttcactgaattatgtgattttatcaaattatt 21929282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 23293001 - 23293039
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  23293001 taattatactgaattatgtgattttttcaaattattagc 23293039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 32910597 - 32910559
Alignment:
Q  94 cataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  32910597 cataattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 36635369 - 36635331
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  36635369 ataattacactgaattatgtgattttctcaaattattag 36635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 37203308 - 37203270
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  37203308 taattacactaaattatgtcattttttcaaattattagc 37203270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 37698757 - 37698719
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  37698757 ataattacactgaattatataattttctcaaattattag 37698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 848025 - 847957
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||| |||  |||||||||| |  ||||| | |||||||||||||||| |||||||||||||    
T  848025 tgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagc 847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 903967 - 903930
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  903967 ataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 2234305 - 2234260
Alignment:
Q  85 acaccgacacataattacactgaattatgtaattttttcaaattat 130  Q
    |||| |||||||||||||| |||||||||| ||||| |||||||||    
T  2234305 acactgacacataattacattgaattatgtgattttctcaaattat 2234260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 14465090 - 14465127
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  14465090 taattacattgaattatgtgattttttcaaattattag 14465127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 22440614 - 22440651
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  22440614 ataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 24999091 - 24999054
Alignment:
Q  93 acataattacactgaattatgtaattttttcaaattat 130  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  24999091 acataattacactgaattgtgtgattttttcaaattat 24999054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 40179650 - 40179687
Alignment:
Q  95 ataattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  40179650 ataattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 6485626 - 6485662
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    |||||||||| |||||||| |||||||||||||||||    
T  6485626 taattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 12895110 - 12895169
Alignment:
Q  77 ccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| |||||||||| |  ||||||  |||||||||| |||||||||||||||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagc 12895169  T

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Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 18844423 - 18844467
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccga 80  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtccgacaccga 18844467  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 26276018 - 26276058
Alignment:
Q  90 gacacataattacactgaattatgtaattttttcaaattat 130  Q
    |||||||||||||| |||||||||| ||||| |||||||||    
T  26276018 gacacataattacattgaattatgtcattttctcaaattat 26276058  T

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Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

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Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 51855 - 51817
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagc 51817  T

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Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 33378 - 33416
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  33378 taattacactgaattatgttattttttcaaattattagc 33416  T

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Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 70335 - 70286
Alignment:
Q  85 acaccgacac--ataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  70335 acaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 92851 - 92813
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagc 92813  T

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Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 14574 - 14537
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  14574 taattacactgaattatgtgattttttcaaattattag 14537  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 44510 - 44578
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| |||||||||| | |||||||||||  ||||||||||||||||| ||||| ||||||| |||||    
T  44510 tgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagc 44578  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 263357 - 263425
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaattttttcaaattattagc 134  Q
    |||| ||||||||||| |||| |||||  ||||||||||||||||||||  |||| |||||||||||||    
T  263357 tgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagc 263425  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 9732 - 9799
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattag 133  Q
    |||| |||||| |||| |||||||||||||  |||||||||||||| || ||||| ||||||||||||    
T  9732 tgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 46726 - 46690
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||| |||||||||||||||||    
T  46726 taattacactgaattatgtgattttttcaaattatta 46690  T

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Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 46778 - 46731
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtccgacaccgaca 82  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt-cgacaccgaca 46731  T

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Target: scaffold0376 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 6380 - 6318
Alignment:
Q  74 acaccgacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||| || |||||||||||||  |||||| ||||||||| |||||| |||||||||||||    
T  6380 acaccgatacgacaccgacacatataattacattgaattatgcaattttgtcaaattattagc 6318  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 3834 - 3900
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||| |||| |||| ||||| |  |||||||||||||||||| ||||||| |||||||||    
T  3834 tgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

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Target: scaffold0722 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 7047 - 7085
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  7047 taattatactaaattatgtaattttttcaaattattagc 7085  T

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Target: scaffold0652 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 477 - 515
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  477 taattacactgaattttgtgattttttcaaattattagc 515  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 63817 - 63779
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  63817 taattgcactgaattatgtaattttctcaaattattagc 63779  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 135308 - 135365
Alignment:
Q  79 gacaccacaccgacacata--attacactgaattatgtaattttttcaaattattagc 134  Q
    ||||| |||||||||||||  ||||||| ||||||||| ||||| |||||||||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagc 135365  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 23585 - 23529
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattacactgaattatgtaatttttt 122  Q
    ||||||||||||| || |||| |||||  |||||||||||||||||||| |||||||    
T  23585 tgtccgacaccgaaacgacactgacacttataattacactgaattatgtgatttttt 23529  T

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Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 23485 - 23438
Alignment:
Q  77 ccgacaccacaccgacac--ataattacactgaattatgtaatttttt 122  Q
    ||||||| ||||||||||  |||||||||||||||||||| |||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgatttttt 23438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 17764 - 17801
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattattag 133  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  17764 taattacactaaattatgtgattttttcaaattattag 17801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 8564 - 8592
Alignment:
Q  36 ctatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||    
T  8564 ctatgaagcacggacactcctcgaattag 8592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 16208 - 16144
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||| |||| |||||||||||| |||||  |||||||| | ||||| | |||||||||    
T  16208 tgtccgacaccaacacgacaccgacacattattacgttgaattatttcattttcttaaattatta 16144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 130526 - 130490
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  130526 taattacactgaattatgtgattttttcaaactatta 130490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 71799 - 71729
Alignment:
Q  68 tgtccgacaccgacaccacaccgacaca--taattacactgaattatgtaa--ttttttcaaattattagc 134  Q
    |||||||||||||||| |||| |||||   ||||||||||||||| ||| |  ||||||||||||||||||    
T  71799 tgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagc 71729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 192264 - 192300
Alignment:
Q  96 taattacactgaattatgtaattttttcaaattatta 132  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  192264 taattacaccgaattatgtaattttctcaaattatta 192300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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