View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0750_low_40 (Length: 358)
Name: NF0750_low_40
Description: NF0750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0750_low_40 |
 | |
|
| [»] scaffold0169 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0169 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: scaffold0169
Description:
Target: scaffold0169; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 23037 - 22704
Alignment:
| Q |
1 |
attttatcaaagctaaaacattgtggtcgatacccggtttctcttcggatgtaggcgaagcattgggtctttaattaccatgctattcaataggtgcgag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| |
|
|
| T |
23037 |
attttatcaaagctaaaacattgtggtcgattcccgtttgctcttcggatgtaggcgaagcattgggtcttta----ccatgctatgcaatgggtgcgag |
22942 |
T |
|
| Q |
101 |
aattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22941 |
aattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataat |
22842 |
T |
|
| Q |
201 |
ggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagag |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22841 |
ggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaagcgaatgtggtcgctcatactcttgctcgagag |
22742 |
T |
|
| Q |
301 |
gccatttccctagctagttcccatgtttttgatgatgt |
338 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
22741 |
accatttccctagctagtccccatatttttgatgatgt |
22704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 281; Significance: 1e-157; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 1512058 - 1512391
Alignment:
| Q |
1 |
attttatcaaagctaaaacattgtggtcgatacccggtttctcttcggatgtaggcgaagcattgggtctttaattaccatgctattcaataggtgcgag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
1512058 |
attttatcaaagctaaaacattgtggtcgattcccgtttgctcttcggatgtaggcgaagcattgggtcttta----ccatgctattcaatgggtgcgag |
1512153 |
T |
|
| Q |
101 |
aattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1512154 |
aattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataat |
1512253 |
T |
|
| Q |
201 |
ggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagag |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1512254 |
ggatgaatgtaggaagaattgcaatgattgttttgaaaattctaaggtggagtttagtcggagacaagcgaatgtggtcgctcatactcttgctcgagag |
1512353 |
T |
|
| Q |
301 |
gccatttccctagctagttcccatgtttttgatgatgt |
338 |
Q |
| |
|
| |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
1512354 |
gtcatttccctagctagtccccatatttttgatgatgt |
1512391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 338
Target Start/End: Complemental strand, 12200464 - 12200360
Alignment:
| Q |
234 |
tgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccatttccctagctagttcccatgtttttgat |
333 |
Q |
| |
|
|||||||| |||| || |||||||| |||||||| |||||| ||||||||||||||||||| ||||||| | | | || |||||||||| |||||| || |
|
|
| T |
12200464 |
tgaaaactttaagatggagtttagttggagacaagcgaatgaggtcgctcatactcttgctagagaggctttattcttacctagttcccaagtttttaat |
12200365 |
T |
|
| Q |
334 |
gatgt |
338 |
Q |
| |
|
||||| |
|
|
| T |
12200364 |
gatgt |
12200360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 5477408 - 5477351
Alignment:
| Q |
231 |
ttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatact |
288 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||| |||| |||||||| |
|
|
| T |
5477408 |
ttttgaaaactctaaggtggagtttagtcggagacaagcgaatgaggtcactcatact |
5477351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 7425102 - 7425066
Alignment:
| Q |
229 |
tgttttgaaaactctaaggtgaagtttagtcggagac |
265 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |
|
|
| T |
7425102 |
tgttttgaaaactctaagatgaagtttagtcggagac |
7425066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 7414030 - 7413996
Alignment:
| Q |
231 |
ttttgaaaactctaaggtgaagtttagtcggagac |
265 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |
|
|
| T |
7414030 |
ttttgaaaactctaagatgaagtttagtcggagac |
7413996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 5477559 - 5477478
Alignment:
| Q |
80 |
atgctattcaataggtgcgagaattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaa |
161 |
Q |
| |
|
|||||||||||| ||| | |||| ||||| |||| ||||||||||||||| || |||| |||||||||| || | |||||| |
|
|
| T |
5477559 |
atgctattcaatgggtacaagaactacaattttcaaatgtagattttgagatgaatgcagagaaagttgtagactttttcaa |
5477478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 1539269 - 1538936
Alignment:
| Q |
1 |
attttatcaaagctaaaacattgtggtcgatacccggtttctcttcggatgtaggcgaagcattgggtctttaattaccatgctattcaataggtgcgag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| || ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
1539269 |
attttatcaaagctaaaacattgtggtcgattcccgtttgctctttggatgtaggcgaagcattaggtcttta----ccatgctattcaataggtgcgag |
1539174 |
T |
|
| Q |
101 |
aattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1539173 |
aattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagatataat |
1539074 |
T |
|
| Q |
201 |
ggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagag |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| |||| |
|
|
| T |
1539073 |
ggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtggagtttagtcggagacaagcgaatatggtcgctcatactcttgctccagag |
1538974 |
T |
|
| Q |
301 |
gccatttccctagctagttcccatgtttttgatgatgt |
338 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1538973 |
gccatttccctaactagttcccatgtttttgatgatgt |
1538936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 22522875 - 22522542
Alignment:
| Q |
1 |
attttatcaaagctaaaacattgtggtcgatacccggtttctcttcggatgtaggcgaagcattgggtctttaattaccatgctattcaataggtgcgag |
100 |
Q |
| |
|
|||||||||||||||| |||||||| ||| |||| ||||||||||||||||||| |||||||||||||||| | |||||||||||| |||||| | |
|
|
| T |
22522875 |
attttatcaaagctaacacattgtgtccgaatcccgttttctcttcggatgtaggcaaagcattgggtcttta----caatgctattcaatgggtgcggg |
22522780 |
T |
|
| Q |
101 |
aattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataat |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||| |
|
|
| T |
22522779 |
aattacaactttcgaacatagattttgagttggacgccaagaaagttgtgtattatttcaataagggaaggaatgatatatccgaatttggagccataat |
22522680 |
T |
|
| Q |
201 |
ggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagag |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
22522679 |
ggatgaatgtaggaagaattgcaatgatttttttgaaaactctaaggtggagtttagtcggagacaagcgaatgtggtcgctcatactcttgctcgagaa |
22522580 |
T |
|
| Q |
301 |
gccatttccctagctagttcccatgtttttgatgatgt |
338 |
Q |
| |
|
|||| ||| ||||||||||||| |||||||||| |||| |
|
|
| T |
22522579 |
gccacttctctagctagttcccgtgtttttgataatgt |
22522542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 54332814 - 54332481
Alignment:
| Q |
1 |
attttatcaaagctaaaacattgtggtcgatacccggtttctcttcggatgtaggcgaagcattgggtctttaattaccatgctattcaataggtgcgag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||| ||||| | |||| |||||||| |||||||| |
|
|
| T |
54332814 |
attttatcaaagctaaaacattgtggtcgaatcccgtttgctctttggatgtaggcgaagcattgagtcttcat----catgatattcaatgggtgcgag |
54332719 |
T |
|
| Q |
101 |
aattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataat |
200 |
Q |
| |
|
||||||||||||| || |||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
54332718 |
aattacaactttcaaacgtagattttgagtttgacaccaagaaagttgtggattatttcaataagggcaataatgatatatcagagtttggagccataat |
54332619 |
T |
|
| Q |
201 |
ggatgaatgtaggaagaattgcaatga-ttgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgaga |
299 |
Q |
| |
|
|||| |||||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54332618 |
ggataaatgtaggaagaattgcaatgattttttttcaaaactctaaggtggagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgaga |
54332519 |
T |
|
| Q |
300 |
ggccatttccctagctagttcccatgtttttgatgatgt |
338 |
Q |
| |
|
||||| ||| ||||||||| ||||| ||||||||||||| |
|
|
| T |
54332518 |
ggccacttctctagctagtccccat-tttttgatgatgt |
54332481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 3 - 305
Target Start/End: Complemental strand, 6033108 - 6032805
Alignment:
| Q |
3 |
tttatcaaagctaaaacattgtggtcgatacccggtttctcttcggatgtaggcgaagcattgggtctttaattaccatgctattcaataggtgcgagaa |
102 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| || |||||||||||| ||||||||||| ||| ||| |||||||||||||| |||||||||| |
|
|
| T |
6033108 |
tttatcaaagctaaaacattgtggtcgaatcccatttgctcttcggatgttggcgaagcattccgtcctta----ccatgctattcaatgggtgcgagaa |
6033013 |
T |
|
| Q |
103 |
ttacaactttcgaatgtagattttgagttggatgccaag-----aaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctat |
197 |
Q |
| |
|
|||||| ||||||| |||||||| |||||| | ||| | |||||||| ||||||||| |||| ||||||||||||||||||||||||| || |
|
|
| T |
6033012 |
ttacaattttcgaacgtagatttcgagttgttggacaactttcaactgttgtggaatatttcaatgagggaaggaatgatatatccgagtttggagccat |
6032913 |
T |
|
| Q |
198 |
aatggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcga |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6032912 |
aatggatgaatgtaggaagaattgcaatgattttcttaaaaactctaaggtggtgtttagtcggagacaagcgaatgtggtcgctcatactcttgctcga |
6032813 |
T |
|
| Q |
298 |
gaggccat |
305 |
Q |
| |
|
|||||||| |
|
|
| T |
6032812 |
gaggccat |
6032805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 338
Target Start/End: Original strand, 19792126 - 19792387
Alignment:
| Q |
79 |
catgctattcaataggtgcgagaattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgata |
178 |
Q |
| |
|
|||||||| |||| ||||| ||| |||||||| | ||||| ||||| |||||||||||||||||||||||||||||||| |||| || | ||||| | |
|
|
| T |
19792126 |
catgctatacaatgggtgcaggaactacaacttcctaatgttgatttcgagttggatgccaagaaagttgtggattattttaatagaggaagaaatgaca |
19792225 |
T |
|
| Q |
179 |
tatccgagtttggagctataatggatgaatgtaggaagaattgcaatgattgt--tttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtg |
276 |
Q |
| |
|
| |||||||||||||| || | |||||||||| || | || | || ||| |||||||||||||||||| |||||| |||||||||| | |||||| |
|
|
| T |
19792226 |
tttccgagtttggagcaattgttgatgaatgtaagagaagatgtagtgtgtgtattttgaaaactctaaggtggagtttaatcggagacaagcaaatgtg |
19792325 |
T |
|
| Q |
277 |
gtcgctcatactcttgctcgagaggccatttccctagctagttcccatgtttttgatgatgt |
338 |
Q |
| |
|
|| |||||||| |||||| ||||||||| || |||||||| ||||| | ||||||||||| |
|
|
| T |
19792326 |
gttgctcatacacttgctagagaggccactttattagctagtccccatctctttgatgatgt |
19792387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 44587420 - 44587745
Alignment:
| Q |
1 |
attttatcaaagctaaaacattgtggtcgatacccggtttctcttcggatgtaggcgaagcattgggtctttaattaccatgctattcaataggtgcgag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |
|
|
| T |
44587420 |
attttatcaaagctaaaacattgtggtcgaatcccgtttgctcttcggatgtaggcgaagcattgggtcttta----ccatgatattcaatgggtgcgag |
44587515 |
T |
|
| Q |
101 |
aattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataat |
200 |
Q |
| |
|
||||||||||||| || |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
44587516 |
aattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaataagggcaggaatgatatatccgagtttggagccgtaat |
44587615 |
T |
|
| Q |
201 |
ggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagag |
300 |
Q |
| |
|
||| |||||||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||| ||| |
|
|
| T |
44587616 |
ggacgaatgtaggaagaattccattgattattttgaaaactctaaggtggagtttagtcggagacaatcgaatgtggttgctcatgctcttgctcaagaa |
44587715 |
T |
|
| Q |
301 |
gccatttccctagctagttcccatgttttt |
330 |
Q |
| |
|
|||| ||||||||||||| |||||||||| |
|
|
| T |
44587716 |
gccacttccctagctagtcaccatgttttt |
44587745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 115 - 304
Target Start/End: Original strand, 25938915 - 25939104
Alignment:
| Q |
115 |
aatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataatggatgaatgtagga |
214 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| |||||||| |||| || ||||||||| ||||||||||||| ||| |||| || ||||| | |
|
|
| T |
25938915 |
aatgtggattttgaattggatgccaagaaagttgtagattattttaatagaggaaacaatgatataaccgagtttggagcaatagtggaggagtgtag-a |
25939013 |
T |
|
| Q |
215 |
agaa-ttgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggcca |
304 |
Q |
| |
|
|||| ||| ||| || ||||||||||||||||| ||||||||||||||||| |||||| ||||||||| ||| | ||||||||||||| |
|
|
| T |
25939014 |
agaagttgtaatctttactttgaaaactctaaggtagagtttagtcggagacaagcgaatgaggtcgctcacactttagctcgagaggcca |
25939104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 338
Target Start/End: Original strand, 40796448 - 40796648
Alignment:
| Q |
138 |
caagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataatggatgaatgtaggaagaattgcaatgattgttttgaa |
237 |
Q |
| |
|
|||||||||||||||||||||||||| || | ||||| || ||||||||||||| || | |||||||||| || | || | || | ||||||| |
|
|
| T |
40796448 |
caagaaagttgtggattatttcaatagaggaagaaatgacatttccgagtttggagtaattgttgatgaatgtaagagaagatgtagtgtgtattttgaa |
40796547 |
T |
|
| Q |
238 |
aactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccatttccctagctagttcccatgtttttgatgatg |
337 |
Q |
| |
|
|||| |||||||||||||| ||||| |||| | |||||||| |||||||| |||||| |||| |||| || |||||||| || || | |||||||||| |
|
|
| T |
40796548 |
aactttaaggtgaagtttaatcggaaacaagcaaatgtggttgctcatacacttgctagagatgccactttattagctagtccctatctctttgatgatg |
40796647 |
T |
|
| Q |
338 |
t |
338 |
Q |
| |
|
| |
|
|
| T |
40796648 |
t |
40796648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 30273747 - 30273684
Alignment:
| Q |
236 |
aaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgaga |
299 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||| |||| |
|
|
| T |
30273747 |
aaaacactaaggtggagtttagtcggagacaagcgaatgaagtcgctcatactcttgctagaga |
30273684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 896941 - 896857
Alignment:
| Q |
127 |
gagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataatggatgaatgta |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || | ||||| || |||||||||||||| || | |||||||||| |
|
|
| T |
896941 |
gagttggatgccaagaaagttgtggattattttaattgaggaagaaatgacatttccgagtttggagcgattgttgatgaatgta |
896857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 17703376 - 17703314
Alignment:
| Q |
231 |
ttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgc |
293 |
Q |
| |
|
||||||||||| | |||| |||||||| |||||||| | |||||||| |||||||||||||| |
|
|
| T |
17703376 |
ttttgaaaactattaggtagagtttagttggagacaatcaaatgtggtagctcatactcttgc |
17703314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 30273920 - 30273802
Alignment:
| Q |
78 |
ccatgctattcaataggtgcgagaattacaactttcgaatgtagattttgagttggatgc----caagaaagttgtggattatttcaataagggcgggaa |
173 |
Q |
| |
|
|||||| ||||| | ||||| ||| ||||| ||| ||||||||||||||| ||||||| ||||||||||| ||||| || ||||||||| | || |
|
|
| T |
30273920 |
ccatgcaattcattgggtgcatgaactacaatttttaaatgtagattttgagatggatgcaaagaaagaaagttgtagattactttaataagggcagcaa |
30273821 |
T |
|
| Q |
174 |
tgatatatccgagtttgga |
192 |
Q |
| |
|
|||| | |||||||||||| |
|
|
| T |
30273820 |
tgatgtttccgagtttgga |
30273802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 340
Target Start/End: Complemental strand, 2274953 - 2274798
Alignment:
| Q |
184 |
gagtttggagctataatggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctc |
283 |
Q |
| |
|
|||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2274953 |
gagtttagagctataagggatgagtgtaggaagaattgcaatgattattttgaaaactttaaggtgaagtttagtcggagacaagcgaatgtggtcgctc |
2274854 |
T |
|
| Q |
284 |
atactcttgctcgagaggccatttccctagctagttcccatgtttttgatgatgtcc |
340 |
Q |
| |
|
||| ||||||||||||| ||| |||||| | ||| || |||||||||||||||||| |
|
|
| T |
2274853 |
atattcttgctcgagagccca-ctccctaaccagtccctatgtttttgatgatgtcc |
2274798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2276171 - 2276018
Alignment:
| Q |
1 |
attttatcaaagctaaaacattgtggtcgatacccggtttctcttcggatgtaggcgaagcattgggtctttaattaccatgctattcaataggtgcgag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||||| || || ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
2276171 |
attttatcaaagctaaaacattgtggtccaaacccgtttgctattcggatgtaggcaaagcattgggtct----ttaccatgctattcaatgggtgcgag |
2276076 |
T |
|
| Q |
101 |
aattacaact--ttcgaatgtagattttgagttggatgccaagaaagttgtggattat |
156 |
Q |
| |
|
| ||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2276075 |
atttaacacttcttcgaatgtagattttggtttggatgccaagaaagttgtggattat |
2276018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 338
Target Start/End: Complemental strand, 27804924 - 27804666
Alignment:
| Q |
80 |
atgctattcaataggtgcgagaattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatat |
179 |
Q |
| |
|
|||||||||||| ||| | |||| |||||||| | ||||||||||||||| ||||||| ||||||||||| || | ||| || || | | |||||| | |
|
|
| T |
27804924 |
atgctattcaatgggtacaagaactacaacttacaaatgtagattttgagatggatgcaaagaaagttgtagacttttttaacaaaagtagtaatgatgt |
27804825 |
T |
|
| Q |
180 |
atccgagtttggagctataatggatgaatgtaggaagaattgc---aatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtg |
276 |
Q |
| |
|
||||||||||| | || |||| ||||| | |||| ||| |||| || ||| ||||||||||||||| |||| ||||||| |||| |||||| | |
|
|
| T |
27804824 |
gtccgagtttggttcaattttggaggaatgcaa-aaga--tgccgtaatgtttttttcgaaaactctaaggtggagttcagtcggaaacaagcgaatgag |
27804728 |
T |
|
| Q |
277 |
gtcgctcatactcttgctcgagaggccatttccctagctagttcccatgtttttgatgatgt |
338 |
Q |
| |
|
|||||||||||||||||| |||||||||| | | |||| || ||||||| ||| ||||||| |
|
|
| T |
27804727 |
gtcgctcatactcttgctagagaggccatattctcagctggtccccatgtctttaatgatgt |
27804666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 20463646 - 20463586
Alignment:
| Q |
232 |
tttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttg |
292 |
Q |
| |
|
||||||||||||||||| |||||| | |||||||| ||| | |||||||||||| ||||| |
|
|
| T |
20463646 |
tttgaaaactctaaggttgagtttaataggagacaagcgagtatggtcgctcatattcttg |
20463586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 221 - 338
Target Start/End: Complemental strand, 14489407 - 14489290
Alignment:
| Q |
221 |
gcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccatttccctagctagttc |
320 |
Q |
| |
|
|||||| || ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| | | | |||||||| | |
|
|
| T |
14489407 |
gcaatgtttatttcgaaaactctaaggtgaagtttagtcggagacaagcgaatgaggtcgctcatactcttgctagagaggctttattcttagctagtcc |
14489308 |
T |
|
| Q |
321 |
ccatgtttttgatgatgt |
338 |
Q |
| |
|
||| |||||| ||||||| |
|
|
| T |
14489307 |
ccaagtttttaatgatgt |
14489290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 27039865 - 27039786
Alignment:
| Q |
221 |
gcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggc |
302 |
Q |
| |
|
|||||| || ||| ||||||||||||||| |||||| |||||| | |||||| ||||||||||||||||||| ||||||| |
|
|
| T |
27039865 |
gcaatgtttatttcgaaaactctaaggtggagtttaa--ggagacgagcgaatgaggtcgctcatactcttgctagagaggc |
27039786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 34673768 - 34673864
Alignment:
| Q |
227 |
attgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccatttccctagctagttccca |
323 |
Q |
| |
|
|||| ||||||||||||||||| |||||| | ||| |||| ||||| ||||| |||||||||||| ||||| |||| |||||||||| |||| |
|
|
| T |
34673768 |
attggtttgaaaactctaaggttgagtttaataggaaacaagcgaatatggtcattcatactcttgcaagagagaccatactcctagctagtcccca |
34673864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 32836007 - 32835921
Alignment:
| Q |
232 |
tttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccatttccctagctagt |
318 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||| |||||||||| || |||||||||| |
|
|
| T |
32836007 |
tttgaaaactctaaggttgagtttagtcggagacaaacgaatgaggtagctcataatcttgcacgagaggccactttcctagctagt |
32835921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 103 - 304
Target Start/End: Original strand, 40492309 - 40492510
Alignment:
| Q |
103 |
ttacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataatgg |
202 |
Q |
| |
|
||||||||| | ||||| ||||||||||||||||| ||||||||||| |||||||| || || || ||||| || || ||||||||||| ||| | | |
|
|
| T |
40492309 |
ttacaacttacaaatgtggattttgagttggatgcaaagaaagttgtagattattttaacaaaggtcataatgacatttctgagtttggagcaatagttg |
40492408 |
T |
|
| Q |
203 |
atgaatgtaggaagaattgcaatgattgttttgaaaactct-aaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagagg |
301 |
Q |
| |
|
| |||||| ||| ||||| | || ||||| ||||||| ||||| ||||||||||||||||| |||||| ||||||||| || |||||||||||| |
|
|
| T |
40492409 |
aggaatgtcggagaaattg-tctacttattttgtaaactctaaaggtagagtttagtcggagacaagcgaatgaggtcgctcacacatttgctcgagagg |
40492507 |
T |
|
| Q |
302 |
cca |
304 |
Q |
| |
|
||| |
|
|
| T |
40492508 |
cca |
40492510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 14150391 - 14150321
Alignment:
| Q |
235 |
gaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccat |
305 |
Q |
| |
|
||||||||||||| |||| |||||||||||| |||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
14150391 |
gaaaactctaaggatgagttcagtcggagacaagcgaatgaggtcgctcatactcttgctaaagaggccat |
14150321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 323
Target Start/End: Complemental strand, 11524157 - 11524066
Alignment:
| Q |
232 |
tttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccatttccctagctagttccca |
323 |
Q |
| |
|
||||||||||||||| | |||||| | |||||||| ||||| | |||||||||||| ||||| |||||||||| |||| |||||||||| |
|
|
| T |
11524157 |
tttgaaaactctaagattgagtttaataggagacaagcgaatatagtcgctcatactattgctagagaggccatactcctaactagttccca |
11524066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 32836135 - 32836093
Alignment:
| Q |
104 |
tacaactttcgaatgtagattttgagttggatgccaagaaagt |
146 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
32836135 |
tacaactttcaaatgttgattttgagttggatgccaagaaagt |
32836093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 14150546 - 14150477
Alignment:
| Q |
80 |
atgctattcaataggtgcgagaattacaactttcgaatgtagattttgagttggatgccaagaaagttgt |
149 |
Q |
| |
|
|||||||||||| ||| | ||| |||||||| | ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
14150546 |
atgctattcaatgggtacaggaactacaacttacaaatgtagattttgagatggatgcaaagaaagttgt |
14150477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 304
Target Start/End: Complemental strand, 3158614 - 3158415
Alignment:
| Q |
104 |
tacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataatgga |
203 |
Q |
| |
|
|||||||| | ||||| ||||| |||||||||| ||||| || || |||||||| |||| | || ||||||||||| ||||||||||| ||| |||| |
|
|
| T |
3158614 |
tacaacttacaaatgtgaattttaagttggatgcgaagaaggt-gtagattattttaatagaagtggtaatgatatatctgagtttggagcaatagtgga |
3158516 |
T |
|
| Q |
204 |
tgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggcc |
303 |
Q |
| |
|
|| ||| || | ||| ||| || |||||||||||||||||| ||||||||||||||||| ||| || ||| ||||||||||||||||||||||| |
|
|
| T |
3158515 |
ggagtgtcagagaagttgtaatctttattttgaaaactctaaggtagagtttagtcggagacaagcgagtgaagtcactcatactcttgctcgagaggcc |
3158416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 338
Target Start/End: Original strand, 19477248 - 19477471
Alignment:
| Q |
115 |
aatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataatggatgaatgtagga |
214 |
Q |
| |
|
||||| |||||||| ||||||||||||| ||||| |||||||| ||| || | ||||||||||||||||||||||| ||||| || || | | ||| |
|
|
| T |
19477248 |
aatgttgattttgaattggatgccaagacggttgtagattattttaattgaggttgcaatgatatatccgagtttggagcaataattgacgagtatcgga |
19477347 |
T |
|
| Q |
215 |
agaattgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccatttccctagc |
314 |
Q |
| |
|
||| | || | | | |||||||| | ||| ||||||||||||||||| |||||| ||||||||| |||||||| |||||||||| || | |||| |
|
|
| T |
19477348 |
gaaatcgtgatatgtatctagaaaactccatggtagagtttagtcggagacaagcgaatgaggtcgctcacactcttgcacgagaggccactttcttagc |
19477447 |
T |
|
| Q |
315 |
tagttcccatgtttttgatgatgt |
338 |
Q |
| |
|
|||| ||||| |||| ||||||| |
|
|
| T |
19477448 |
tagtccccatacttttaatgatgt |
19477471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 12928525 - 12928683
Alignment:
| Q |
115 |
aatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttggagctataatggatgaatgtagga |
214 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||||||||||| |||| || ||||||||| |||| |||||||| ||| || | || |||| || |
|
|
| T |
12928525 |
aatgtggattttgaattggatgccaagaaagttgtggattattttaatagaggaaacaatgatataaccgaatttggagcaatagtgaaggagtgta-ga |
12928623 |
T |
|
| Q |
215 |
agaa-ttgcaatgattgttttgaaaactctaaggtgaagtttagtcggagacaaacgaat |
273 |
Q |
| |
|
|||| ||| ||| || ||||||||||||||||| |||||||||||| |||| ||||| |
|
|
| T |
12928624 |
agaagttgtaatctttactttgaaaactctaaggtagagtttagtcggaaacaagcgaat |
12928683 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 3215058 - 3215128
Alignment:
| Q |
235 |
gaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccat |
305 |
Q |
| |
|
||||||||||||||| |||| ||| |||||||| |||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
3215058 |
gaaaactctaaggtggagttcagtaggagacaagcgaatgaggtcgctcatactcttgctacagaggccat |
3215128 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 30092040 - 30091970
Alignment:
| Q |
231 |
ttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagagg |
301 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||| |||| | ||||||||| ||||| |||||||||| |
|
|
| T |
30092040 |
ttttgaaaacactaaggtagagtttagtcggagacaatcgaaggaggtcgctcacactctagctcgagagg |
30091970 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 46149378 - 46149310
Alignment:
| Q |
231 |
ttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgaga |
299 |
Q |
| |
|
||||||||||||||||||| |||||||| | | |||| ||||||||||| ||| |||||||||||||| |
|
|
| T |
46149378 |
ttttgaaaactctaaggtggagtttagttgaaaacaagggaatgtggtcgttcagactcttgctcgaga |
46149310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 3214922 - 3214972
Alignment:
| Q |
99 |
agaattacaactttcgaatgtagattttgagttggatgccaagaaagttgt |
149 |
Q |
| |
|
|||| |||||||| | ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
3214922 |
agaactacaacttccaaatgtagattttgagatggatgcaaagaaagttgt |
3214972 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 50858466 - 50858553
Alignment:
| Q |
251 |
agtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccatttccctagctagttcccatgtttttgatgatgt |
338 |
Q |
| |
|
||||||||||||||||| |||| | |||||||||||||||||||||||||||| | ||| |||||||| ||||||| |||||| |||| |
|
|
| T |
50858466 |
agtttagtcggagacaagcgaacgaggtcgctcatactcttgctcgagaggccttgtccttagctagtccccatgtgtttgataatgt |
50858553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 338
Target Start/End: Original strand, 11116163 - 11116270
Alignment:
| Q |
231 |
ttttgaaaactctaaggtgaagtttagtcggagacaaacgaatgtggtcgctcatactcttgctcgagaggccatttccctagctagttcccatgttttt |
330 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||| |||| | ||||||||| |||||||| | |||||||| ||| |||||||| ||||| |||| |
|
|
| T |
11116163 |
ttttgcaaactctaaggtagagtttagtcggagacaagcgaacgaggtcgctcacactcttgcacaagaggccacgtccttagctagtccccataatttt |
11116262 |
T |
|
| Q |
331 |
gatgatgt |
338 |
Q |
| |
|
||||||| |
|
|
| T |
11116263 |
aatgatgt |
11116270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 11116054 - 11116123
Alignment:
| Q |
122 |
attttgagttggatgccaagaaagttgtggattatttcaataagggcgggaatgatatatccgagtttgg |
191 |
Q |
| |
|
|||||||||||||||| || || ||||| |||||||| ||||| || | |||||||| ||||||||||| |
|
|
| T |
11116054 |
attttgagttggatgcaaaaaaggttgtagattattttaataacggtagtaatgatatttccgagtttgg |
11116123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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