View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0750_low_78 (Length: 255)
Name: NF0750_low_78
Description: NF0750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0750_low_78 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 28064037 - 28063790
Alignment:
| Q |
1 |
tttctggtggtattgttgtttctatctggaaaatcacaaataaatctagtttttcttaaacttcattaatttgaaaattcatcaggagcgacattcttat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
28064037 |
tttctggtggtattgttgtttctatctggaaaatcacaaataaatatagtttttcttaaactttattaatttgaaaattcatcaggagcgacattcttat |
28063938 |
T |
|
| Q |
101 |
aaatcaatatacactcattaaaatgtcacggcgttatggtgtt-aaattttgtgaaaatgattgatggaaacaattgtagatgaaaaattaatgatttta |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28063937 |
aaatcaatatacactcattaaaatgtcacggcattatggtgttaaaattttgtgaaaatgattgatggaaacaattgtagatgaaaaattaatgatttta |
28063838 |
T |
|
| Q |
200 |
gatgaaaattaccacatctatcaattcttcaattgcttcttctctgct |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28063837 |
gatgaaaattaccacatctatcaattcttcaattgcttcttctctgct |
28063790 |
T |
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