View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0750_low_94 (Length: 239)

Name: NF0750_low_94
Description: NF0750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0750_low_94
NF0750_low_94
[»] chr8 (1 HSPs)
chr8 (23-86)||(37436111-37436174)


Alignment Details
Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 37436111 - 37436174
Alignment:
Q  23 tcttcattatttcctccttaactacaggtcagcaccatcttctctttccttcaactcttcatct 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37436111 tcttcattatttcctccttaactacaggtcagcaccatcttctctttccttcaactcttcatct 37436174  T

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