View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0750_low_98 (Length: 238)
Name: NF0750_low_98
Description: NF0750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0750_low_98 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 29 - 238
Target Start/End: Complemental strand, 34353894 - 34353685
Alignment:
| Q |
29 |
caaaacatatccctctataatgtagagccaggcatatgtaagagaagaagaaaaagcaagtgaaaagtaattggtaacttaagtacaaaataaaactatg |
128 |
Q |
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| T |
34353894 |
caaaacatatccctctataatgtagagccaggcatatgtaagagaagaagaaaaagcaagtgaaaagtaattggtaacttaagtacaaaataaaactatg |
34353795 |
T |
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| Q |
129 |
gtatcctaataaactagtaaatcctaaaacttgttaacaaaaacaataagtaaattctcgatttcattctacaattgtaatgtaattgtatgcgtgagta |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34353794 |
gtatcctaataaactagtaaatcctaaaacttgttaacaaaaacaataagtaaattctcgatttcattctacaattgtaatgtaattgtatgcgtgagta |
34353695 |
T |
|
| Q |
229 |
agttggtctt |
238 |
Q |
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|||||||||| |
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| T |
34353694 |
agttggtctt |
34353685 |
T |
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