View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0751_low_9 (Length: 275)
Name: NF0751_low_9
Description: NF0751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0751_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 38 - 223
Target Start/End: Original strand, 34097774 - 34097961
Alignment:
| Q |
38 |
gaacctgtgacc-ctcaataattcacattaaagagaaatttgtagcaaataaatcatttgataaatataaggaaaaaacagtctgttttagacatg-ata |
135 |
Q |
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| T |
34097774 |
gaacctttgacctctcaataatttacattaaagagaaatttgtagcaaataaatcatttgacaaatataaggaaaaaacagtcggttttggacatggata |
34097873 |
T |
|
| Q |
136 |
tatggcttaacctaaatattatttaaacttagattaggaattcaagtgttttcacttggacgttgagggtttctctagaggtgtcaat |
223 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
34097874 |
tatggcctaacctaaatattatttaaacttagattaggaattcaagtgttttcacttggacgttgagggtttctctagagatgtcaat |
34097961 |
T |
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