View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0752-Insertion-10 (Length: 511)

Name: NF0752-Insertion-10
Description: NF0752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0752-Insertion-10
NF0752-Insertion-10
[»] chr8 (47 HSPs)
chr8 (8-304)||(33101291-33101588)
chr8 (402-511)||(45475812-45475921)
chr8 (402-511)||(23606628-23606737)
chr8 (402-511)||(30883324-30883433)
chr8 (411-511)||(23798269-23798369)
chr8 (401-511)||(2952219-2952329)
chr8 (401-511)||(10917386-10917496)
chr8 (402-511)||(13534686-13534794)
chr8 (402-511)||(13624226-13624334)
chr8 (402-511)||(41879176-41879285)
chr8 (415-511)||(42600777-42600873)
chr8 (411-507)||(5860752-5860848)
chr8 (402-506)||(37430157-37430261)
chr8 (416-511)||(3048530-3048625)
chr8 (402-505)||(7944521-7944624)
chr8 (411-505)||(8102913-8103007)
chr8 (402-500)||(34789861-34789959)
chr8 (402-505)||(11290185-11290288)
chr8 (403-505)||(39332405-39332507)
chr8 (429-505)||(5942697-5942773)
chr8 (402-505)||(5973106-5973209)
chr8 (402-505)||(15167414-15167517)
chr8 (411-505)||(5721560-5721654)
chr8 (307-377)||(20003727-20003797)
chr8 (308-377)||(37430076-37430145)
chr8 (308-377)||(45475932-45476001)
chr8 (402-505)||(41677172-41677276)
chr8 (402-505)||(15078759-15078862)
chr8 (411-505)||(25561503-25561595)
chr8 (308-376)||(2952137-2952205)
chr8 (402-497)||(8646215-8646309)
chr8 (403-482)||(30674403-30674482)
chr8 (311-377)||(13534609-13534675)
chr8 (311-377)||(13624149-13624215)
chr8 (308-377)||(23606548-23606617)
chr8 (308-376)||(3048435-3048503)
chr8 (311-376)||(30883447-30883512)
chr8 (403-505)||(14509983-14510084)
chr8 (411-482)||(23941099-23941170)
chr8 (308-377)||(10917506-10917575)
chr8 (308-377)||(23798179-23798248)
chr8 (308-377)||(41879295-41879364)
chr8 (308-377)||(42600898-42600967)
chr8 (403-502)||(34048705-34048806)
chr8 (403-448)||(9108551-9108596)
chr8 (433-469)||(5757117-5757153)
chr8 (411-449)||(34868185-34868223)
[»] chr4 (86 HSPs)
chr4 (402-511)||(54780777-54780886)
chr4 (402-511)||(2790739-2790848)
chr4 (402-511)||(43455529-43455638)
chr4 (402-511)||(47128987-47129096)
chr4 (411-511)||(38209598-38209698)
chr4 (411-506)||(37777230-37777325)
chr4 (402-511)||(10978900-10979009)
chr4 (402-511)||(32915385-32915494)
chr4 (402-511)||(34768572-34768681)
chr4 (411-511)||(34027579-34027679)
chr4 (403-511)||(37514659-37514767)
chr4 (402-511)||(32128584-32128693)
chr4 (402-511)||(48209240-48209349)
chr4 (404-511)||(5128842-5128949)
chr4 (417-511)||(40089516-40089609)
chr4 (401-507)||(54083239-54083345)
chr4 (412-511)||(13460207-13460306)
chr4 (402-511)||(19498504-19498611)
chr4 (411-505)||(35779333-35779426)
chr4 (410-511)||(1105532-1105633)
chr4 (402-511)||(16845021-16845131)
chr4 (411-511)||(10428204-10428312)
chr4 (402-505)||(52468292-52468395)
chr4 (423-505)||(4167910-4167992)
chr4 (402-511)||(35465107-35465215)
chr4 (401-511)||(16882392-16882502)
chr4 (414-479)||(17679432-17679497)
chr4 (401-482)||(39655251-39655332)
chr4 (406-505)||(27112036-27112135)
chr4 (406-505)||(36118460-36118559)
chr4 (405-499)||(36178684-36178778)
chr4 (308-377)||(32915506-32915575)
chr4 (402-505)||(10041998-10042101)
chr4 (402-505)||(24396940-24397043)
chr4 (402-469)||(51691913-51691980)
chr4 (307-377)||(34027699-34027769)
chr4 (402-483)||(51964736-51964820)
chr4 (415-511)||(24969437-24969523)
chr4 (308-377)||(54780899-54780968)
chr4 (414-505)||(2135331-2135422)
chr4 (411-505)||(37744916-37745011)
chr4 (402-484)||(16922327-16922409)
chr4 (308-377)||(37514781-37514848)
chr4 (402-504)||(39329390-39329492)
chr4 (308-377)||(10979023-10979092)
chr4 (415-511)||(38352276-38352362)
chr4 (303-376)||(55255379-55255452)
chr4 (452-511)||(23509846-23509905)
chr4 (402-497)||(36362869-36362964)
chr4 (312-375)||(47129109-47129172)
chr4 (402-467)||(9578662-9578728)
chr4 (311-377)||(35779248-35779314)
chr4 (307-376)||(2790658-2790727)
chr4 (308-377)||(17679520-17679589)
chr4 (307-376)||(34768491-34768560)
chr4 (402-511)||(55255269-55255366)
chr4 (308-371)||(5128758-5128821)
chr4 (307-377)||(16922244-16922314)
chr4 (416-482)||(40217261-40217327)
chr4 (312-377)||(1105652-1105717)
chr4 (308-377)||(16882313-16882382)
chr4 (308-377)||(24969717-24969786)
chr4 (308-377)||(32128705-32128774)
chr4 (308-377)||(37777140-37777209)
chr4 (308-377)||(54083160-54083229)
chr4 (308-368)||(48209376-48209436)
chr4 (308-375)||(10428116-10428183)
chr4 (308-375)||(23508427-23508494)
chr4 (314-377)||(38352189-38352252)
chr4 (411-505)||(45656181-45656275)
chr4 (308-377)||(16845142-16845210)
chr4 (308-377)||(19498622-19498691)
chr4 (417-482)||(29425187-29425252)
chr4 (308-377)||(40089645-40089714)
chr4 (308-367)||(980336-980395)
chr4 (308-363)||(13460305-13460360)
chr4 (411-457)||(23508517-23508564)
chr4 (403-446)||(24614018-24614061)
chr4 (320-375)||(38209520-38209575)
chr4 (322-377)||(43455463-43455518)
chr4 (402-444)||(30507120-30507162)
chr4 (432-473)||(11906919-11906960)
chr4 (432-473)||(11911158-11911199)
chr4 (319-376)||(35465227-35465284)
chr4 (308-368)||(9578575-9578635)
chr4 (412-504)||(15735102-15735189)
[»] scaffold0039 (2 HSPs)
scaffold0039 (402-511)||(106533-106642)
scaffold0039 (308-377)||(106654-106723)
[»] chr6 (35 HSPs)
chr6 (402-511)||(13727398-13727507)
chr6 (402-511)||(21479492-21479601)
chr6 (411-511)||(33774115-33774215)
chr6 (402-509)||(20711719-20711826)
chr6 (414-511)||(27788699-27788796)
chr6 (411-511)||(28075781-28075881)
chr6 (402-511)||(19737691-19737800)
chr6 (402-511)||(21280543-21280652)
chr6 (410-511)||(24711006-24711107)
chr6 (411-511)||(17353952-17354052)
chr6 (402-510)||(34397856-34397964)
chr6 (411-501)||(1155857-1155947)
chr6 (409-511)||(30832530-30832632)
chr6 (415-511)||(235236-235334)
chr6 (406-505)||(2477587-2477686)
chr6 (406-505)||(6159442-6159541)
chr6 (414-505)||(21183686-21183777)
chr6 (402-483)||(27314177-27314259)
chr6 (306-376)||(13727315-13727385)
chr6 (411-505)||(20611794-20611888)
chr6 (308-377)||(24710914-24710983)
chr6 (308-377)||(27788608-27788677)
chr6 (308-377)||(30832443-30832512)
chr6 (308-376)||(21280665-21280733)
chr6 (308-377)||(27314097-27314166)
chr6 (429-504)||(4036953-4037028)
chr6 (403-482)||(30121789-30121868)
chr6 (308-376)||(21479615-21479683)
chr6 (308-377)||(17354073-17354142)
chr6 (308-377)||(20711638-20711707)
chr6 (316-377)||(235151-235212)
chr6 (459-503)||(27994775-27994819)
chr6 (308-375)||(19737612-19737678)
chr6 (322-377)||(28075905-28075960)
chr6 (309-376)||(33774238-33774305)
[»] chr5 (62 HSPs)
chr5 (402-511)||(34756362-34756471)
chr5 (411-511)||(9364286-9364386)
chr5 (402-511)||(27079006-27079115)
chr5 (402-511)||(28822338-28822447)
chr5 (403-511)||(19523194-19523302)
chr5 (402-511)||(30854324-30854433)
chr5 (402-511)||(36187875-36187984)
chr5 (402-511)||(38869359-38869468)
chr5 (403-511)||(15480086-15480194)
chr5 (411-511)||(16198799-16198899)
chr5 (411-510)||(16799332-16799431)
chr5 (402-511)||(2274885-2274994)
chr5 (402-511)||(16592070-16592179)
chr5 (411-511)||(40389541-40389641)
chr5 (402-508)||(23284058-23284164)
chr5 (416-504)||(27924084-27924172)
chr5 (402-501)||(31194608-31194706)
chr5 (411-511)||(7670919-7671020)
chr5 (402-503)||(36868872-36868973)
chr5 (402-506)||(22986554-22986658)
chr5 (411-484)||(7338021-7338094)
chr5 (403-505)||(14318382-14318484)
chr5 (402-502)||(2024638-2024738)
chr5 (402-501)||(31881430-31881528)
chr5 (402-505)||(34425904-34426007)
chr5 (411-505)||(2530902-2530996)
chr5 (307-376)||(15480005-15480074)
chr5 (402-505)||(1366522-1366625)
chr5 (411-502)||(26718954-26719045)
chr5 (411-502)||(26988698-26988789)
chr5 (402-505)||(33037781-33037884)
chr5 (403-505)||(2412089-2412191)
chr5 (308-377)||(22986473-22986542)
chr5 (308-377)||(27079128-27079197)
chr5 (308-377)||(36187795-36187864)
chr5 (307-377)||(16198708-16198778)
chr5 (307-377)||(19523315-19523385)
chr5 (307-377)||(31194527-31194597)
chr5 (308-377)||(7671049-7671118)
chr5 (308-377)||(9364407-9364476)
chr5 (402-503)||(10407464-10407565)
chr5 (411-504)||(24395741-24395834)
chr5 (313-377)||(2275006-2275070)
chr5 (402-505)||(11242314-11242417)
chr5 (402-505)||(40794323-40794426)
chr5 (411-497)||(10543682-10543768)
chr5 (404-478)||(22648734-22648808)
chr5 (307-377)||(23283942-23284012)
chr5 (403-505)||(41911614-41911716)
chr5 (432-505)||(15639644-15639717)
chr5 (308-377)||(16799240-16799309)
chr5 (308-377)||(38869279-38869348)
chr5 (309-377)||(28822253-28822321)
chr5 (316-376)||(34756289-34756349)
chr5 (8-127)||(7622322-7622444)
chr5 (308-376)||(16591990-16592058)
chr5 (402-449)||(606211-606258)
chr5 (402-493)||(17344969-17345060)
chr5 (401-446)||(27530543-27530588)
chr5 (308-377)||(27924198-27924267)
chr5 (308-377)||(31881348-31881417)
chr5 (316-373)||(40389461-40389518)
[»] chr3 (60 HSPs)
chr3 (402-511)||(21582769-21582878)
chr3 (402-511)||(54619202-54619311)
chr3 (403-511)||(47467682-47467790)
chr3 (402-511)||(3953895-3954004)
chr3 (402-511)||(34290635-34290744)
chr3 (411-511)||(44708475-44708575)
chr3 (402-507)||(42098803-42098908)
chr3 (402-511)||(53149313-53149422)
chr3 (402-511)||(53506883-53506992)
chr3 (411-507)||(8073346-8073442)
chr3 (402-511)||(37168365-37168474)
chr3 (402-511)||(38681092-38681201)
chr3 (402-511)||(43207237-43207345)
chr3 (401-511)||(54407156-54407265)
chr3 (402-511)||(36716024-36716133)
chr3 (411-507)||(27078577-27078673)
chr3 (411-507)||(27084374-27084470)
chr3 (414-509)||(9878698-9878793)
chr3 (415-508)||(50939245-50939338)
chr3 (402-509)||(18372479-18372590)
chr3 (401-510)||(50258621-50258731)
chr3 (402-505)||(8420330-8420433)
chr3 (411-501)||(36605973-36606063)
chr3 (402-505)||(54574826-54574929)
chr3 (438-511)||(29620423-29620496)
chr3 (411-500)||(28689369-28689458)
chr3 (411-482)||(32319163-32319234)
chr3 (308-375)||(42098922-42098989)
chr3 (307-377)||(21582891-21582961)
chr3 (307-377)||(47467803-47467873)
chr3 (403-500)||(49393099-49393195)
chr3 (402-482)||(26279569-26279649)
chr3 (308-376)||(38681011-38681079)
chr3 (309-375)||(3953816-3953882)
chr3 (403-505)||(25855426-25855527)
chr3 (311-377)||(53149235-53149301)
chr3 (308-377)||(8073257-8073326)
chr3 (305-370)||(29620361-29620426)
chr3 (312-377)||(37168486-37168551)
chr3 (312-377)||(44708595-44708660)
chr3 (308-377)||(54407073-54407142)
chr3 (308-376)||(36715942-36716010)
chr3 (402-478)||(42453435-42453511)
chr3 (415-510)||(48157138-48157223)
chr3 (403-505)||(789940-790042)
chr3 (311-377)||(36606083-36606149)
chr3 (314-376)||(48157248-48157310)
chr3 (414-467)||(23641329-23641382)
chr3 (308-377)||(50939152-50939221)
chr3 (308-376)||(27078486-27078554)
chr3 (308-376)||(27084283-27084351)
chr3 (308-376)||(54619121-54619189)
chr3 (308-377)||(34290554-34290623)
chr3 (308-377)||(43207157-43207226)
chr3 (308-377)||(48720429-48720498)
chr3 (308-376)||(50258542-50258610)
chr3 (402-505)||(52374660-52374763)
chr3 (307-376)||(53506801-53506869)
chr3 (436-503)||(29598113-29598179)
chr3 (320-377)||(18372601-18372658)
[»] chr1 (66 HSPs)
chr1 (402-511)||(5316686-5316795)
chr1 (402-511)||(14146306-14146415)
chr1 (402-511)||(23185433-23185542)
chr1 (403-511)||(6771797-6771905)
chr1 (411-511)||(9173030-9173130)
chr1 (411-511)||(9181012-9181112)
chr1 (411-511)||(27559643-27559743)
chr1 (402-511)||(3406424-3406533)
chr1 (402-511)||(3440287-3440396)
chr1 (402-511)||(5027555-5027664)
chr1 (402-511)||(44655747-44655856)
chr1 (411-511)||(1366885-1366985)
chr1 (411-511)||(4971625-4971725)
chr1 (415-511)||(19955723-19955819)
chr1 (410-511)||(16140061-16140162)
chr1 (411-507)||(17168966-17169062)
chr1 (402-511)||(41697135-41697244)
chr1 (402-511)||(50881436-50881545)
chr1 (415-511)||(40501801-40501897)
chr1 (411-509)||(51607446-51607545)
chr1 (402-496)||(21740935-21741029)
chr1 (411-505)||(38547043-38547137)
chr1 (415-511)||(13913491-13913589)
chr1 (402-505)||(39134720-39134824)
chr1 (402-505)||(45758506-45758609)
chr1 (308-377)||(5027677-5027746)
chr1 (308-377)||(6771920-6771989)
chr1 (402-494)||(6889634-6889726)
chr1 (402-494)||(6891480-6891572)
chr1 (402-503)||(5533326-5533428)
chr1 (402-500)||(38853539-38853637)
chr1 (308-377)||(14146426-14146495)
chr1 (402-482)||(22865459-22865538)
chr1 (403-505)||(6221690-6221791)
chr1 (402-511)||(44895658-44895761)
chr1 (308-377)||(3406545-3406614)
chr1 (308-377)||(3440206-3440275)
chr1 (308-377)||(23185553-23185622)
chr1 (432-505)||(43235798-43235871)
chr1 (403-505)||(26803960-26804059)
chr1 (308-376)||(27906646-27906714)
chr1 (308-376)||(44655868-44655936)
chr1 (314-377)||(16140181-16140244)
chr1 (308-375)||(21740852-21740919)
chr1 (402-505)||(33170771-33170874)
chr1 (402-505)||(50146308-50146411)
chr1 (402-492)||(35392295-35392384)
chr1 (308-377)||(17169082-17169151)
chr1 (308-377)||(19955843-19955912)
chr1 (308-377)||(22865378-22865447)
chr1 (308-376)||(4971536-4971604)
chr1 (402-511)||(27906727-27906824)
chr1 (311-375)||(50881557-50881621)
chr1 (402-502)||(10925951-10926052)
chr1 (402-465)||(17322621-17322684)
chr1 (307-368)||(9172939-9173000)
chr1 (307-368)||(9180921-9180982)
chr1 (308-377)||(40501707-40501776)
chr1 (308-377)||(51607358-51607427)
chr1 (306-368)||(1366795-1366857)
chr1 (307-377)||(6889736-6889806)
chr1 (307-377)||(6891582-6891652)
chr1 (311-375)||(13913401-13913465)
chr1 (314-377)||(34247153-34247216)
chr1 (308-367)||(52127460-52127519)
chr1 (325-377)||(41697072-41697124)
[»] chr7 (53 HSPs)
chr7 (401-511)||(20091278-20091388)
chr7 (402-511)||(8171537-8171646)
chr7 (402-511)||(10955479-10955588)
chr7 (402-511)||(18776764-18776873)
chr7 (402-511)||(29077215-29077324)
chr7 (403-511)||(12596286-12596394)
chr7 (411-511)||(24525692-24525792)
chr7 (401-511)||(48983841-48983951)
chr7 (402-506)||(19692094-19692198)
chr7 (411-511)||(47984976-47985077)
chr7 (411-510)||(10329417-10329516)
chr7 (413-511)||(38414885-38414983)
chr7 (415-511)||(23551081-23551178)
chr7 (403-502)||(9021799-9021898)
chr7 (402-484)||(26254015-26254097)
chr7 (402-505)||(2611260-2611363)
chr7 (411-507)||(8239686-8239782)
chr7 (415-483)||(33162350-33162418)
chr7 (402-505)||(7398452-7398555)
chr7 (411-502)||(23859077-23859168)
chr7 (403-494)||(6765680-6765771)
chr7 (414-501)||(28749715-28749801)
chr7 (402-505)||(36891579-36891682)
chr7 (307-377)||(12596206-12596276)
chr7 (401-494)||(23744808-23744901)
chr7 (402-505)||(12981327-12981430)
chr7 (307-377)||(29077335-29077405)
chr7 (460-511)||(25010428-25010479)
chr7 (402-505)||(27237421-27237524)
chr7 (411-501)||(20153206-20153296)
chr7 (404-502)||(36902924-36903022)
chr7 (308-377)||(10329327-10329396)
chr7 (308-377)||(20091197-20091266)
chr7 (308-377)||(25010542-25010611)
chr7 (307-375)||(18776682-18776750)
chr7 (311-374)||(8171460-8171523)
chr7 (308-377)||(24525599-24525668)
chr7 (308-377)||(48983756-48983825)
chr7 (308-376)||(23550988-23551056)
chr7 (308-376)||(26254110-26254178)
chr7 (308-376)||(28749827-28749895)
chr7 (402-505)||(12419493-12419596)
chr7 (403-482)||(21763586-21763665)
chr7 (308-374)||(10955605-10955671)
chr7 (418-504)||(23020498-23020583)
chr7 (308-377)||(47984885-47984954)
chr7 (406-482)||(18201161-18201237)
chr7 (429-504)||(38971255-38971330)
chr7 (310-377)||(8239802-8239869)
chr7 (440-503)||(17800257-17800320)
chr7 (314-377)||(40357303-40357366)
chr7 (307-377)||(19692210-19692280)
chr7 (403-459)||(9014177-9014233)
[»] chr2 (50 HSPs)
chr2 (402-511)||(9046023-9046133)
chr2 (402-511)||(3155211-3155320)
chr2 (402-511)||(4505888-4505997)
chr2 (402-511)||(6965001-6965110)
chr2 (411-508)||(24410434-24410531)
chr2 (402-511)||(29939861-29939970)
chr2 (403-511)||(3953000-3953108)
chr2 (411-511)||(10762573-10762673)
chr2 (402-511)||(26716122-26716232)
chr2 (402-507)||(7162782-7162887)
chr2 (402-511)||(12337447-12337556)
chr2 (411-511)||(8907087-8907187)
chr2 (402-505)||(16097008-16097111)
chr2 (415-511)||(27506752-27506848)
chr2 (402-503)||(24035544-24035645)
chr2 (404-505)||(38400798-38400899)
chr2 (402-486)||(34693994-34694078)
chr2 (402-486)||(34716406-34716490)
chr2 (401-505)||(13800542-13800647)
chr2 (402-479)||(40636164-40636241)
chr2 (401-505)||(12134038-12134142)
chr2 (402-505)||(21665699-21665802)
chr2 (402-505)||(28425709-28425812)
chr2 (312-376)||(40636253-40636317)
chr2 (403-505)||(11912757-11912859)
chr2 (308-376)||(4506010-4506078)
chr2 (423-479)||(5952735-5952791)
chr2 (402-505)||(7742132-7742236)
chr2 (308-375)||(7162900-7162967)
chr2 (308-377)||(27506659-27506728)
chr2 (308-377)||(29939781-29939850)
chr2 (436-505)||(37182670-37182739)
chr2 (311-375)||(6965122-6965186)
chr2 (314-377)||(5952642-5952705)
chr2 (308-375)||(12337365-12337432)
chr2 (307-377)||(9046144-9046214)
chr2 (311-377)||(10762488-10762554)
chr2 (403-505)||(16227368-16227470)
chr2 (311-377)||(34694089-34694155)
chr2 (311-377)||(34716501-34716567)
chr2 (307-376)||(8906995-8907064)
chr2 (308-377)||(24410554-24410623)
chr2 (431-499)||(22727530-22727598)
chr2 (403-482)||(42029168-42029247)
chr2 (307-376)||(1396616-1396685)
chr2 (308-377)||(26716244-26716313)
chr2 (308-375)||(3953121-3953188)
chr2 (308-377)||(8327732-8327801)
chr2 (402-443)||(22727456-22727497)
chr2 (403-459)||(11952588-11952643)
[»] scaffold0070 (2 HSPs)
scaffold0070 (412-511)||(1338-1437)
scaffold0070 (308-377)||(1458-1527)
[»] scaffold1590 (1 HSPs)
scaffold1590 (402-505)||(257-360)
[»] scaffold0012 (1 HSPs)
scaffold0012 (411-505)||(206497-206591)
[»] scaffold0018 (1 HSPs)
scaffold0018 (411-505)||(173518-173612)
[»] scaffold0097 (1 HSPs)
scaffold0097 (411-505)||(38926-39020)
[»] scaffold0182 (1 HSPs)
scaffold0182 (403-503)||(23993-24093)
[»] scaffold0007 (1 HSPs)
scaffold0007 (402-504)||(230858-230960)
[»] scaffold1320 (1 HSPs)
scaffold1320 (402-505)||(1355-1458)
[»] scaffold0022 (2 HSPs)
scaffold0022 (401-505)||(40086-40192)
scaffold0022 (401-505)||(138146-138252)
[»] scaffold0003 (1 HSPs)
scaffold0003 (428-482)||(351359-351413)
[»] scaffold0001 (3 HSPs)
scaffold0001 (307-377)||(183175-183245)
scaffold0001 (456-509)||(181916-181969)
scaffold0001 (410-460)||(183106-183156)
[»] scaffold0227 (2 HSPs)
scaffold0227 (438-505)||(16028-16095)
scaffold0227 (411-448)||(16123-16160)
[»] scaffold0229 (1 HSPs)
scaffold0229 (413-510)||(23879-23976)


Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-140; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 8 - 304
Target Start/End: Complemental strand, 33101588 - 33101291
Alignment:
Q  8 gaaatggctgttttcattcaccatatcatcctcaaatacaactgggacatggttgatattgatcaacctattgtatacccttttgttgattttcccaaag 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  33101588 gaaatggctgttttcattcaccatatcatcctcaaatacaactgggacatggtcgatgttgatcaacctattgtatacccttttgttgattttcccaaag 33101489  T
Q  108 gtttgccaattagagtccaaagccaagccactctttaatatcaacaaaatccatctgaacccctcttagtaccataaataataagagtccttatagtagt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33101488 gtttgccaattagagtccaaagccaagccactctttaatatcaacaaaatccatctgaacccctcttggtaccataaataataagagtccttatagtagt 33101389  T
Q  208 ag-nnnnnnnatttacatatcgaagtagatttatttaatgtgaacaattccatgctgctttgattttatcttcccaagccatcctttagttttatggc 304  Q
    ||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33101388 agttttttcaatttacatatcgaagtagatttatttaatgtgaacaattccatgctgctttgattttatcttcctaagccatcctttagttttatggc 33101291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 45475921 - 45475812
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  45475921 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagg 45475822  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  45475821 aacccccacc 45475812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 23606628 - 23606737
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  23606628 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgagg 23606727  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  23606728 aacccccacc 23606737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 30883433 - 30883324
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  30883433 aaaagagcaatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 30883334  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  30883333 aacccccacc 30883324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 23798269 - 23798369
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  23798269 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccac 23798368  T
Q  511 c 511  Q
    |    
T  23798369 c 23798369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 2952219 - 2952329
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  2952219 aaaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 2952318  T
Q  501 gaacccccacc 511  Q
    |||||||||||    
T  2952319 gaacccccacc 2952329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 10917496 - 10917386
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  10917496 aaaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgag 10917397  T
Q  501 gaacccccacc 511  Q
    |||||||||||    
T  10917396 gaacccccacc 10917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 13534686 - 13534794
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  13534686 aaaagagcaatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 13534784  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  13534785 aacccccacc 13534794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 13624226 - 13624334
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  13624226 aaaagagcaatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 13624324  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  13624325 aacccccacc 13624334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 41879285 - 41879176
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||||||||     
T  41879285 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgaga 41879186  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  41879185 aacccccacc 41879176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 415 - 511
Target Start/End: Complemental strand, 42600873 - 42600777
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42600873 tctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 42600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 411 - 507
Target Start/End: Original strand, 5860752 - 5860848
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccc 507  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||| ||||||    
T  5860752 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaacccc 5860848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 506
Target Start/End: Original strand, 37430157 - 37430261
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||| ||||||||||||||    
T  37430157 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgagg 37430256  T
Q  502 aaccc 506  Q
    |||||    
T  37430257 aaccc 37430261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 511
Target Start/End: Original strand, 3048530 - 3048625
Alignment:
Q  416 ctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||||||||| ||||||||| ||||    
T  3048530 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacc 3048625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 7944521 - 7944624
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||| |||||| |||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||    
T  7944521 aaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagg 7944620  T
Q  502 aacc 505  Q
    ||||    
T  7944621 aacc 7944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 411 - 505
Target Start/End: Complemental strand, 8103007 - 8102913
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    ||||| |||||| |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||| | | ||||||||||||||||||    
T  8103007 atgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacc 8102913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 402 - 500
Target Start/End: Original strand, 34789861 - 34789959
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||||||||||||||||||| || | |||||||||||||||||| || ||||||||||  |||||||||||||||||||| ||| |||||||||||||    
T  34789861 aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 34789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 11290288 - 11290185
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||| |||||| |||| ||||||||||||||||||||| ||||||||||  |||||| ||||||||||||| ||| |||||||||||||     
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagc 11290189  T
Q  502 aacc 505  Q
    ||||    
T  11290188 aacc 11290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 403 - 505
Target Start/End: Original strand, 39332405 - 39332507
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| ||||||||||||  ||| | ||||||||||||||||||| | |||||| |||||||| |||||||||||||| ||| |||||||||||||||    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  503 acc 505  Q
    |||    
T  39332505 acc 39332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 429 - 505
Target Start/End: Complemental strand, 5942773 - 5942697
Alignment:
Q  429 ttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  5942773 ttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 5973106 - 5973209
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||  ||||||||| || ||||||| | | ||||||||| ||||    
T  5973106 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgagg 5973205  T
Q  502 aacc 505  Q
    ||||    
T  5973206 aacc 5973209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 15167414 - 15167517
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| |||||||||||||| || |||  ||||||||||| |||||||||| |||||||| |||  |||||||||||||    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 15167513  T
Q  502 aacc 505  Q
    ||||    
T  15167514 aacc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 411 - 505
Target Start/End: Complemental strand, 5721654 - 5721560
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    ||||||||||||  ||| ||||||||||||||||||||||| ||||||  ||||||||||||| |||||||| ||| |||||||| |||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacc 5721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 20003727 - 20003797
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  20003727 ccagggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacg 20003797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 37430076 - 37430145
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  37430076 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 37430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 45476001 - 45475932
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||| |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  45476001 cagggccatccctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacg 45475932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 41677172 - 41677276
Alignment:
Q  402 aaaagaacgatgttctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    |||||||| |||||||||||| |||| || |||||||||||||||| || |||||||||||| |||| | |||||||||||| ||| | |||||||||||    
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T
Q  501 gaacc 505  Q
    |||||    
T  41677272 gaacc 41677276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 15078862 - 15078759
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||  |||||||||||| | || |||||||||||||| ||||||| ||||||||||  |||||||||| |||||||| |||  |||||||||||||    
T  15078862 aaaagaataatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgagg 15078763  T
Q  502 aacc 505  Q
    ||||    
T  15078762 aacc 15078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 411 - 505
Target Start/End: Original strand, 25561503 - 25561595
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||||| || | ||||| |||||||||||||||||||||||||||| || ||||||| |||||||| ||| ||||||||||||||||||    
T  25561503 atgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacc 25561595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 2952137 - 2952205
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||||    
T  2952137 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 2952205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 497
Target Start/End: Complemental strand, 8646309 - 8646215
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacat 497  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||  |||||||||||  ||||| |||| |||||||| ||| ||||||||||    
T  8646309 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc-atacacgcaaatgtgaaaatcactaccgtatacat 8646215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 403 - 482
Target Start/End: Original strand, 30674403 - 30674482
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    ||||||| |||||||||||| || | |||||||||||||| |||||| |||||||||||| ||||| |||||||||||||    
T  30674403 aaagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaat 30674482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 13534609 - 13534675
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  13534609 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 13534675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 13624149 - 13624215
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  13624149 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 13624215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 23606548 - 23606617
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| |||||| ||||||| ||||||||||||||||||||    
T  23606548 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacg 23606617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 3048435 - 3048503
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||| ||||||||||||||| || |||| || ||| |||||||||||||||||||||||||||    
T  3048435 cagggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 3048503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 30883512 - 30883447
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||| |||| || |||| || ||| |||||||||||||||||||||||||||    
T  30883512 ggccgtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 30883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 505
Target Start/End: Original strand, 14509983 - 14510084
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtg-aaaatgacttccgtatacatgagg 501  Q
    ||||||| |||||| ||||| |||| |||||||| ||||| |||||| ||||||||  ||||||||||||| ||| ||||| ||| |||||||||||||     
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagt 14510080  T
Q  502 aacc 505  Q
    ||||    
T  14510081 aacc 14510084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 23941099 - 23941170
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    ||||| |||||| |||| ||||||||||||||||||||| | |||||| ||| ||||||||||| |||||||    
T  23941099 atgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaat 23941170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 10917575 - 10917506
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||| |||| | |||||||||||| || |||| | |||| ||||||||||||||||||||||||||||    
T  10917575 cagggctgtccttaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 10917506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 23798179 - 23798248
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| |||||  |||||||| || ||||||||||||||||    
T  23798179 cagggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacg 23798248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 41879364 - 41879295
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||| ||| || |||| |||||| ||||||||  ||||||||||| ||||||    
T  41879364 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacg 41879295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 42600967 - 42600898
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| |  ||| |||||||| |||||||||||||||||||    
T  42600967 cagggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacg 42600898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 502
Target Start/End: Original strand, 34048705 - 34048806
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgc--ggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||||| |||||||||||| |  | ||||||||||||||||| ||| |||||||||    | ||||||||||| ||||||| ||| | |||||||||||    
T  34048705 aaagaacaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgag 34048804  T
Q  501 ga 502  Q
    ||    
T  34048805 ga 34048806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 9108596 - 9108551
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggt 448  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 469
Target Start/End: Complemental strand, 5757153 - 5757117
Alignment:
Q  433 aagataaatacaaggtgccgtatatatgcggtacacc 469  Q
    ||||||||||||||||||||||||||||||| |||||    
T  5757153 aagataaatacaaggtgccgtatatatgcggaacacc 5757117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 34868185 - 34868223
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtg 449  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  34868185 atgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 54780886 - 54780777
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  54780886 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 54780787  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  54780786 aacccccacc 54780777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 2790739 - 2790848
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2790739 aaaagaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 2790838  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  2790839 aacccccacc 2790848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 43455529 - 43455638
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43455529 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 43455628  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  43455629 aacccccacc 43455638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 47129096 - 47128987
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  47129096 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagg 47128997  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  47128996 aacccccacc 47128987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 38209598 - 38209698
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  38209598 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccac 38209697  T
Q  511 c 511  Q
    |    
T  38209698 c 38209698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 411 - 506
Target Start/End: Original strand, 37777230 - 37777325
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccc 506  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37777230 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccc 37777325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 10979009 - 10978900
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  10979009 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgagg 10978910  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  10978909 aacccccacc 10978900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 32915494 - 32915385
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| | ||||||||||||||    
T  32915494 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgagg 32915395  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  32915394 aacccccacc 32915385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 34768572 - 34768681
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  34768572 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgagg 34768671  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  34768672 aacccccacc 34768681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 411 - 511
Target Start/End: Complemental strand, 34027679 - 34027579
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  34027679 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccac 34027580  T
Q  511 c 511  Q
    |    
T  34027579 c 34027579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 403 - 511
Target Start/End: Complemental strand, 37514767 - 37514659
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||| ||    
T  37514767 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaaga 37514668  T
Q  503 acccccacc 511  Q
    | |||||||    
T  37514667 atccccacc 37514659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 32128693 - 32128584
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||     
T  32128693 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataaga 32128594  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  32128593 aacccccacc 32128584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 48209349 - 48209240
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||||||||||||     
T  48209349 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgaga 48209250  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  48209249 aacccccacc 48209240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 404 - 511
Target Start/End: Original strand, 5128842 - 5128949
Alignment:
Q  404 aagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaa 503  Q
    |||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||    
T  5128842 aagagcgatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaa 5128941  T
Q  504 cccccacc 511  Q
    || |||||    
T  5128942 cctccacc 5128949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 417 - 511
Target Start/End: Complemental strand, 40089609 - 40089516
Alignment:
Q  417 tatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  40089609 tatttatattt-ttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 40089516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 401 - 507
Target Start/End: Original strand, 54083239 - 54083345
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  54083239 aaaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgag 54083338  T
Q  501 gaacccc 507  Q
    |||||||    
T  54083339 gaacccc 54083345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 412 - 511
Target Start/End: Complemental strand, 13460306 - 13460207
Alignment:
Q  412 tgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| | |||||||||||| |||||||||| |||||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 19498611 - 19498504
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||| | ||||||||||||    
T  19498611 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatat--gcggtacagccaaaggtgaaaatgactactgtatacatgagg 19498514  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  19498513 aacccccacc 19498504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 411 - 505
Target Start/End: Original strand, 35779333 - 35779426
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  35779333 atgttctatt-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 35779426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 410 - 511
Target Start/End: Complemental strand, 1105633 - 1105532
Alignment:
Q  410 gatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccca 509  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||| | |||||||||||||| || |||||||||| ||||||||    
T  1105633 gatgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaaccccca 1105534  T
Q  510 cc 511  Q
    ||    
T  1105533 cc 1105532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 16845131 - 16845021
Alignment:
Q  402 aaaagaacgatgttctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    |||||| | ||||||||||||||||| || |||||||||||| |||||| ||||||||||  |||||||||| ||||||||||||| |||||||||||||    
T  16845131 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgag 16845032  T
Q  501 gaacccccacc 511  Q
    |||||||||||    
T  16845031 gaacccccacc 16845021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 10428204 - 10428312
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaag--------gtgaaaatgacttccgtatacatgagga 502  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||| |||||||||||||||    
T  10428204 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgagga 10428303  T
Q  503 acccccacc 511  Q
    ||| |||||    
T  10428304 acctccacc 10428312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 52468395 - 52468292
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||   |||| |||||||||||||| ||| |||||| |||||||    
T  52468395 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgagg 52468296  T
Q  502 aacc 505  Q
    ||||    
T  52468295 aacc 52468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 423 - 505
Target Start/End: Original strand, 4167910 - 4167992
Alignment:
Q  423 tatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || |||||||||||||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacc 4167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 35465215 - 35465107
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||| ||||||||||| ||| |||||||||| ||||||| |||||||||||||||||| ||| |||||||| ||| ||||||||||||||    
T  35465215 aaaagaacaatgttatatttatattttttacaagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgagg 35465117  T
Q  502 aacccccacc 511  Q
    || |||||||    
T  35465116 aatccccacc 35465107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 16882392 - 16882502
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||| ||| |||||||||||||| || |||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||| ||||||  ||| |    
T  16882392 aaaaaaaacaatgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtatgtatggg 16882491  T
Q  501 gaacccccacc 511  Q
    |||||| ||||    
T  16882492 gaaccctcacc 16882502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 414 - 479
Target Start/End: Complemental strand, 17679497 - 17679432
Alignment:
Q  414 ttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaa 479  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17679497 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 401 - 482
Target Start/End: Original strand, 39655251 - 39655332
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  39655251 aaaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaat 39655332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 406 - 505
Target Start/End: Complemental strand, 27112135 - 27112036
Alignment:
Q  406 gaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||| |||||| ||||| |||| ||||||||||||||||||||| | |||||||||| |||||| ||| |||||||| ||| ||||||||||||||||||    
T  27112135 gaacaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 406 - 505
Target Start/End: Original strand, 36118460 - 36118559
Alignment:
Q  406 gaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||| |||||||||||| |||| ||||||||||||||||||||| |||||||||| | ||||||||||  ||||||| ||| ||||||||||||| ||||    
T  36118460 gaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacc 36118559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 405 - 499
Target Start/End: Complemental strand, 36178778 - 36178684
Alignment:
Q  405 agaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatga 499  Q
    ||||| |||||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||| || |||||||||    
T  36178778 agaacaatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 32915575 - 32915506
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  32915575 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 32915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 10041998 - 10042101
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| | |||| |||||||||||||||||||| |||| | |||||| ||| |||||||| ||| ||||||||| ||||    
T  10041998 aaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggagg 10042097  T
Q  502 aacc 505  Q
    ||||    
T  10042098 aacc 10042101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 24397043 - 24396940
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| || || |||||| |||| |||||||||||||| ||||||| ||||||||| | ||||| ||||||||||||| |||  |||||||||||||    
T  24397043 aaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgagg 24396944  T
Q  502 aacc 505  Q
    ||||    
T  24396943 aacc 24396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 51691913 - 51691980
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacc 469  Q
    |||||| | |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 51691980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 34027769 - 34027699
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||| |||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  34027769 ccagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 34027699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 402 - 483
Target Start/End: Complemental strand, 51964820 - 51964736
Alignment:
Q  402 aaaagaacgatgttctatttatatttatt---aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatg 483  Q
    |||||| | ||||||||||||||||| ||   |||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  51964820 aaaagagcaatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 415 - 511
Target Start/End: Complemental strand, 24969523 - 24969437
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||| |||||||||||||| ||||||          ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24969523 tctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 24969437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 54780968 - 54780899
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| |  |||| |||||| ||||||||||||||||||||||||||||    
T  54780968 cagggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacg 54780899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 414 - 505
Target Start/End: Original strand, 2135331 - 2135422
Alignment:
Q  414 ttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||| |||| |||||||| || || |||  |||||| ||||||||||    
T  2135331 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacc 2135422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 411 - 505
Target Start/End: Original strand, 37744916 - 37745011
Alignment:
Q  411 atgttctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||||| |||| || |||||||||||| |||||| || ||||||||| |||| |||||||||||||| ||| |||||||| |||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacc 37745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 402 - 484
Target Start/End: Original strand, 16922327 - 16922409
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 484  Q
    |||||| | ||||||||||||||||| |||||||||||||| || ||| ||||||||||| |||  |||||||||||||||||    
T  16922327 aaaagagcaatgttctatttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaatga 16922409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 37514848 - 37514781
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||| ||||| |||||  ||||||| ||||||||||||||||||||||||||||    
T  37514848 cagggccgtccctgagaatttggaggctcagc--ggggaatgaaaagaggccagtgataaaatcaaaacg 37514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 39329390 - 39329492
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||||| |||| |||| |||||||||||||||||||||  ||||||||| | ||||||||||| |||||||   | ||||||||| ||||    
T  39329390 aaaagaacaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggagg 39329489  T
Q  502 aac 504  Q
    |||    
T  39329490 aac 39329492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 10979092 - 10979023
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||| ||||||||||||||||| ||||| |||||| ||||||||  ||||||||||||||||||    
T  10979092 cagggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacg 10979023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 38352276 - 38352362
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||| |||||||||||||| ||||||          ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  38352276 tctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacc 38352362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 303 - 376
Target Start/End: Complemental strand, 55255452 - 55255379
Alignment:
Q  303 gcggccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||| |||||||||||||||||||||||||| || |||| |  ||| |||||||||||||||||||||||||||    
T  55255452 gcgggcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 55255379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 452 - 511
Target Start/End: Original strand, 23509846 - 23509905
Alignment:
Q  452 gtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    |||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacc 23509905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 497
Target Start/End: Original strand, 36362869 - 36362964
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacat 497  Q
    |||||||| ||| ||| |||| |||| ||||||||||||||||| |||||||||||||||  |||||||||| ||| |||| ||| || |||||||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat 36362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 47129172 - 47129109
Alignment:
Q  312 gccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    |||||||||||||||||||||| || |||| || ||| ||||||||||||||||||||||||||    
T  47129172 gccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa 47129109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 467
Target Start/End: Original strand, 9578662 - 9578728
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggt-gccgtatatatgcggtaca 467  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  9578662 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 35779248 - 35779314
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||| |||||||||||||||||  |||| ||||| ||||||||| ||||||||||||||||||    
T  35779248 ggccgtccttgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacg 35779314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 2790658 - 2790727
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    ||||||||||| || |||||||||||| || |||| |||||| ||||||| |||||||||||||||||||    
T  2790658 ccagggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaac 2790727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 17679589 - 17679520
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||| ||||||||||||||| || | || |||||| ||||||| ||||||||||||||||||||    
T  17679589 cagggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacg 17679520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 34768491 - 34768560
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||| |||||||||||||||||||| || |||  |||||| ||||||||| |||||||||||||||||    
T  34768491 ccagggtcgtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaac 34768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 55255366 - 55255269
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | |||||| |||||||||| ||||||||||||||||||||||||             |||||| |||||||||||||| ||||||||||||||    
T  55255366 aaaagagcaatgttccatttatattttttaaaagataaatacaaggtgccgc------------cacccagaggtgaaaatgactaccgtatacatgagg 55255279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 5128758 - 5128821
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatc 371  Q
    ||||||||||||||||||||  |||| || |||| |||||| ||||||||||||||||||||||    
T  5128758 cagggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatc 5128821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 16922244 - 16922314
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||||||||| ||||| ||  ||  |||||| ||||||| ||||||||||||||||||||    
T  16922244 ccagggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacg 16922314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 482
Target Start/End: Complemental strand, 40217327 - 40217261
Alignment:
Q  416 ctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    ||||||| |||| |||||||||||||| |||||| |||||||||||| |||| |||||| |||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaat 40217261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 1105717 - 1105652
Alignment:
Q  312 gccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||| ||||||||| |||| || |||| |||||| |||||||| |||||||||||||||||||    
T  1105717 gccgtccttgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 1105652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 16882313 - 16882382
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || ||||  ||||| |||||| | |||||||||||||||||||    
T  16882313 cagggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacg 16882382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 24969786 - 24969717
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| ||  ||| |||||| ||||||||| |||||||||| |||||||    
T  24969786 cagggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaacg 24969717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 32128774 - 32128705
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||| ||||| || |||| |||||| |||| ||| |||||||||||||||||||    
T  32128774 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacg 32128705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 37777140 - 37777209
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||| |||||| | |||||||||| || |||| |||||| |||||||| |||||||||||||||||||    
T  37777140 cagggctgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 37777209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 54083160 - 54083229
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| | |||||||||| || |||| | |||| |||||||| |||||||||||||||||||    
T  54083160 cagggccgtccctaaaaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 54083229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 48209436 - 48209376
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaa 368  Q
    |||||||||||||||||||||||||| || |||| |||| | ||||||| |||||||||||    
T  48209436 cagggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaa 48209376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 10428116 - 10428183
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    |||||||||||  ||||||||||||| || |||| |||||| |||||||| ||||| |||||||||||    
T  10428116 cagggccgtcctcgagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaa 10428183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 23508427 - 23508494
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    |||| |||||| ||| |||||||||| || |||  |||||| ||||||||||||||||||||||||||    
T  23508427 caggaccgtccatgaaaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaa 23508494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 38352189 - 38352252
Alignment:
Q  314 cgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||| |||||||||||| || |||| |||||| |||||||  |||||||||||||||||||    
T  38352189 cgtccctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacg 38352252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 505
Target Start/End: Complemental strand, 45656275 - 45656181
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    ||||| |||||| |||| ||||||||||||| ||||||| | |||||||||| || | ||||| |||||||| ||   ||||||||||| |||||    
T  45656275 atgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacc 45656181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 16845210 - 16845142
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| || ||| |||| | |||||||||||||||||||||    
T  16845210 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaa-aagccagtgataaaatcaaaacg 16845142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 19498691 - 19498622
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||| || |||||||||||| || ||||  ||||| |||| |||||| ||||||||||||||||    
T  19498691 cagggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacg 19498622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 482
Target Start/End: Original strand, 29425187 - 29425252
Alignment:
Q  417 tatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    |||||| |||| |||||| ||||||| |||||||||||||||||| |||||   ||||||||||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgcagtacatttaaaggtgaaaat 29425252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 40089714 - 40089645
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||| ||||||| |||||||||||| || ||||  ||||| |||||| | |||||||||||||||||||    
T  40089714 cagggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacg 40089645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 367
Target Start/End: Complemental strand, 980395 - 980336
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataa 367  Q
    |||| ||||||||||||||||||||| || |||| |||| ||||| |||||| |||||||    
T  980395 caggaccgtccctgagaattcggaggctcggctctgggattaaaaggaggccggtgataa 980336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 363
Target Start/End: Complemental strand, 13460360 - 13460305
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtg 363  Q
    ||||||||||| |||||||||||||| ||  ||| ||||||||||||||| |||||    
T  13460360 cagggccgtccttgagaattcggaggctcgactctgggaataaaaagaggtcagtg 13460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 457
Target Start/End: Original strand, 23508517 - 23508564
Alignment:
Q  411 atgttctatttata-tttattaaaagataaatacaaggtgccgtatat 457  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  23508517 atgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 446
Target Start/End: Complemental strand, 24614061 - 24614018
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaag 446  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 375
Target Start/End: Original strand, 38209520 - 38209575
Alignment:
Q  320 tgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    |||||||| ||||| || |||| || ||| ||||||||||||||||||||||||||    
T  38209520 tgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa 38209575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 377
Target Start/End: Original strand, 43455463 - 43455518
Alignment:
Q  322 agaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||| ||  ||| |||||| |||||||| |||||||||||||||||||    
T  43455463 agaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacg 43455518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 444
Target Start/End: Original strand, 30507120 - 30507162
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaataca 444  Q
    |||||||| |||||||||||| |||| ||||||||||||||||    
T  30507120 aaaagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 473
Target Start/End: Original strand, 11906919 - 11906960
Alignment:
Q  432 aaagataaatacaaggtgccgtatatatgcggtacacccaaa 473  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  11906919 aaagataaatacaaggtaccgtatatatgtggtacatccaaa 11906960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 473
Target Start/End: Original strand, 11911158 - 11911199
Alignment:
Q  432 aaagataaatacaaggtgccgtatatatgcggtacacccaaa 473  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  11911158 aaagataaatacaaggtaccgtatatatgtggtacatccaaa 11911199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 35465284 - 35465227
Alignment:
Q  319 ctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    ||||||||||||||| ||   || |||||| |||||||| ||||||||||||||||||    
T  35465284 ctgagaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaac 35465227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 9578575 - 9578635
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaa 368  Q
    ||||||||||| |||||||||||||| ||  ||| |||| | ||||||||| |||||||||    
T  9578575 cagggccgtccttgagaattcggaggctcgactctgggagtgaaaagaggcaagtgataaa 9578635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 504
Target Start/End: Complemental strand, 15735189 - 15735102
Alignment:
Q  412 tgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaac 504  Q
    ||||||||||| |||| ||||||||||||||||||  | |||||||||     ||||| |||  ||||||| | | |||||||||||||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatatat-----acaccaaaaaatgaaaatcattaccgtatacatgaggaac 15735102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 106642 - 106533
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  106642 aaaagaacaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 106543  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  106542 aacccccacc 106533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 106723 - 106654
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||| ||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  106723 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 106654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 3e-43; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 13727398 - 13727507
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  13727398 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 13727497  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  13727498 aacccccacc 13727507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 21479601 - 21479492
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  21479601 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 21479502  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  21479501 aacccccacc 21479492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 411 - 511
Target Start/End: Complemental strand, 33774215 - 33774115
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  33774215 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccac 33774116  T
Q  511 c 511  Q
    |    
T  33774115 c 33774115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 402 - 509
Target Start/End: Original strand, 20711719 - 20711826
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20711719 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 20711818  T
Q  502 aaccccca 509  Q
    ||||||||    
T  20711819 aaccccca 20711826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 27788699 - 27788796
Alignment:
Q  414 ttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27788699 ttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 27788796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 411 - 511
Target Start/End: Complemental strand, 28075881 - 28075781
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  28075881 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 28075782  T
Q  511 c 511  Q
    |    
T  28075781 c 28075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 19737691 - 19737800
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  19737691 aaaagagcaatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagg 19737790  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  19737791 aacccccacc 19737800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 21280652 - 21280543
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  21280652 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagg 21280553  T
Q  502 aacccccacc 511  Q
    ||| ||||||    
T  21280552 aactcccacc 21280543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 410 - 511
Target Start/End: Original strand, 24711006 - 24711107
Alignment:
Q  410 gatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccca 509  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| ||||||||||||||||||||||    
T  24711006 gatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaaccccca 24711105  T
Q  510 cc 511  Q
    ||    
T  24711106 cc 24711107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 411 - 511
Target Start/End: Complemental strand, 17354052 - 17353952
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||| ||||||||||    
T  17354052 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccac 17353953  T
Q  511 c 511  Q
    |    
T  17353952 c 17353952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 34397964 - 34397856
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||  |||| ||||||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgagg 34397865  T
Q  502 aacccccac 510  Q
    |||| ||||    
T  34397864 aacctccac 34397856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 1155857 - 1155947
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  1155857 atgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 409 - 511
Target Start/End: Original strand, 30832530 - 30832632
Alignment:
Q  409 cgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccc 508  Q
    |||||||||||||| |||| |||||| ||||||||||| ||||||||||||| |||||||||| || ||||||||||| |||||| ||||||||||||||    
T  30832530 cgatgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaaccccc 30832629  T
Q  509 acc 511  Q
    |||    
T  30832630 acc 30832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 235236 - 235334
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccg--tatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||| |||||||||||||| |||||||||  ||||||| | |||||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  235236 tctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccccacc 235334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 406 - 505
Target Start/End: Original strand, 2477587 - 2477686
Alignment:
Q  406 gaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||| |||||| ||||| |||| ||||||||||||||||||||| | |||||||||| |||||| ||| |||||||| ||| ||||||||||||||||||    
T  2477587 gaacaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 406 - 505
Target Start/End: Complemental strand, 6159541 - 6159442
Alignment:
Q  406 gaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||  |||||||| |||| ||| ||||||| || |||||||    
T  6159541 gaacaatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacc 6159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 414 - 505
Target Start/End: Original strand, 21183686 - 21183777
Alignment:
Q  414 ttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    ||||||||| |||| ||||||||||||||||| ||  |||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacc 21183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 402 - 483
Target Start/End: Original strand, 27314177 - 27314259
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaa-gataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatg 483  Q
    |||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || |||||||||||    
T  27314177 aaaagagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 376
Target Start/End: Original strand, 13727315 - 13727385
Alignment:
Q  306 gccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||||    
T  13727315 gccagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 13727385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 411 - 505
Target Start/End: Complemental strand, 20611888 - 20611794
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||| ||| |||| ||||| ||||||||||||||| ||||||||| ||  ||| |||||||||||||| ||| ||||||||||||||||||    
T  20611888 atgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacc 20611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 24710914 - 24710983
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||||||  ||||||||||||||||||    
T  24710914 cagggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaacg 24710983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 27788608 - 27788677
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  27788608 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 27788677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 30832443 - 30832512
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||| ||| || |||| |||||| ||||||||||||||||||||||||||||    
T  30832443 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 30832512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 21280733 - 21280665
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||||    
T  21280733 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 21280665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 27314097 - 27314166
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||| |||||||||| ||  ||| |||||| ||||||||||||||||||||||||||||    
T  27314097 cagggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacg 27314166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 504
Target Start/End: Complemental strand, 4037028 - 4036953
Alignment:
Q  429 ttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaac 504  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||| || || ||| ||||||| |||||||||    
T  4037028 ttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaac 4036953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 403 - 482
Target Start/End: Complemental strand, 30121868 - 30121789
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    ||||||| ||||| |||||| |||| |||||| |||||||||||||| | |||||||||| |||| ||||||||||||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaat 30121789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 21479683 - 21479615
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||| ||||||||| ||||| || |||| || ||| |||||||||||||||||||||||||||    
T  21479683 cagggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 21479615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 17354142 - 17354073
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| ||  |||  ||||| |||||||| |||||||||||||||||||    
T  17354142 cagggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacg 17354073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 20711638 - 20711707
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||| |||||||||||||||||||| || | || |||||| |||||||| |||| ||||||||||||||    
T  20711638 cagggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacg 20711707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 235151 - 235212
Alignment:
Q  316 tccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||| ||||||||||||||| |||  | |||| ||||||| ||||||||||||||||||||    
T  235151 tccctaagaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacg 235212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 503
Target Start/End: Complemental strand, 27994819 - 27994775
Alignment:
Q  459 tgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaa 503  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||    
T  27994819 tgcggtacactcaaaggtgaaaatcactaccgtatacatgaggaa 27994775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 19737612 - 19737678
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    ||||| |||||||||||||| | |||||| ||||  ||| | ||||||||||||||||||||||||||    
T  19737612 cagggtcgtccctgagaatttgaaggttcggctctagga-tgaaaagaggccagtgataaaatcaaaa 19737678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 377
Target Start/End: Complemental strand, 28075960 - 28075905
Alignment:
Q  322 agaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||| ||||| || |||| |||||| ||||||||||||||| ||||||||||||    
T  28075960 agaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacg 28075905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 33774305 - 33774238
Alignment:
Q  309 agggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||| ||| |||||||||||||| || |||| |  ||| ||||||||||||| |||||||||||||    
T  33774305 agggccatccttgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaac 33774238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 34756362 - 34756471
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  34756362 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 34756461  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  34756462 aacccccacc 34756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 411 - 511
Target Start/End: Complemental strand, 9364386 - 9364286
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9364386 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 9364287  T
Q  511 c 511  Q
    |    
T  9364286 c 9364286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 27079115 - 27079006
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  27079115 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgagg 27079016  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  27079015 aacccccacc 27079006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 28822338 - 28822447
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  28822338 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatg 28822437  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  28822438 aacccccacc 28822447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 403 - 511
Target Start/End: Complemental strand, 19523302 - 19523194
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  19523302 aaagagcggtgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagga 19523203  T
Q  503 acccccacc 511  Q
    |||||||||    
T  19523202 acccccacc 19523194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 30854433 - 30854324
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||||||    
T  30854433 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgagg 30854334  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  30854333 aacccccacc 30854324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 36187875 - 36187984
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||     
T  36187875 aaaagagcgatgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaga 36187974  T
Q  502 aacccccacc 511  Q
    |||| |||||    
T  36187975 aacctccacc 36187984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 38869359 - 38869468
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||     
T  38869359 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaga 38869458  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  38869459 aacccccacc 38869468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 403 - 511
Target Start/End: Original strand, 15480086 - 15480194
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||| ||||||||    
T  15480086 aaagaccgatgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgagga 15480185  T
Q  503 acccccacc 511  Q
    |||||||||    
T  15480186 acccccacc 15480194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 16198799 - 16198899
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  16198799 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 16198898  T
Q  511 c 511  Q
    |    
T  16198899 c 16198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 411 - 510
Target Start/End: Original strand, 16799332 - 16799431
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  16799332 atgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccac 16799431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 2274994 - 2274885
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  2274994 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgagg 2274895  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  2274894 aacccccacc 2274885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 16592070 - 16592179
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | |||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  16592070 aaaagagcaatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgagg 16592169  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  16592170 aacccccacc 16592179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 40389541 - 40389641
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||||||  |||||||||||||||    
T  40389541 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaacccccac 40389640  T
Q  511 c 511  Q
    |    
T  40389641 c 40389641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 402 - 508
Target Start/End: Original strand, 23284058 - 23284164
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||   ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgagg 23284157  T
Q  502 aaccccc 508  Q
    |||||||    
T  23284158 aaccccc 23284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 27924172 - 27924084
Alignment:
Q  416 ctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaac 504  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaac 27924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 402 - 501
Target Start/End: Original strand, 31194608 - 31194706
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||    
T  31194608 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 411 - 511
Target Start/End: Complemental strand, 7671020 - 7670919
Alignment:
Q  411 atgttctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccca 509  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| | |||||    
T  7671020 atgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgaggtatcccca 7670921  T
Q  510 cc 511  Q
    ||    
T  7670920 cc 7670919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 402 - 503
Target Start/End: Original strand, 36868872 - 36868973
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||||||||||  ||| ||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  502 aa 503  Q
    ||    
T  36868972 aa 36868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 402 - 506
Target Start/End: Original strand, 22986554 - 22986658
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | |||||||||| |||||| |||||||| |||||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||     
T  22986554 aaaagagcaatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaga 22986653  T
Q  502 aaccc 506  Q
    |||||    
T  22986654 aaccc 22986658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 7338094 - 7338021
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 484  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  7338094 atgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 403 - 505
Target Start/End: Original strand, 14318382 - 14318484
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||| | |||| |||||  ||||||| ||| |||||||||||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  503 acc 505  Q
    |||    
T  14318482 acc 14318484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 502
Target Start/End: Original strand, 2024638 - 2024738
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| || |||||||||||||| |||||||||||||| | ||||||||||| ||||||| ||| || |||||||||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgagg 2024737  T
Q  502 a 502  Q
    |    
T  2024738 a 2024738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 402 - 501
Target Start/End: Original strand, 31881430 - 31881528
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||| ||| || ||||||| ||| ||||||||||||||    
T  31881430 aaaagagcaatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 34426007 - 34425904
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||  |||| |||||||||||||||||||||||||||||||| | |||||| |||| | ||||| | | ||||||||||||||    
T  34426007 aaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgagg 34425908  T
Q  502 aacc 505  Q
    ||||    
T  34425907 aacc 34425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 411 - 505
Target Start/End: Original strand, 2530902 - 2530996
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    ||||||||||||  ||| ||||||||||||||||| ||| ||||||||| ||||||| |||||||||||||| ||| | ||||||||||||||||    
T  2530902 atgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacc 2530996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 15480005 - 15480074
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    ||||||||||||||||||||||||||| || |||| |||||| |||||||||||||||||||||||||||    
T  15480005 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaac 15480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 1366522 - 1366625
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| ||| |||||||||||||| ||  ||||||||||| |||||| ||| |||||||| ||| ||||||| ||||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgagg 1366621  T
Q  502 aacc 505  Q
    ||||    
T  1366622 aacc 1366625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 411 - 502
Target Start/End: Original strand, 26718954 - 26719045
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    |||||||||||| | || ||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||| ||| ||| |||||||||||    
T  26718954 atgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 411 - 502
Target Start/End: Original strand, 26988698 - 26988789
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    |||||||||||| | || ||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||| ||| ||| |||||||||||    
T  26988698 atgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 33037884 - 33037781
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||| |||||| |||| |||||||||||||||||| |  ||||||||||  |||||||||||||||||||  | | ||||||||||||||    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  502 aacc 505  Q
    ||||    
T  33037784 aacc 33037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 403 - 505
Target Start/End: Complemental strand, 2412191 - 2412089
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| |||||||||||| |||| |||||| |||||||||| ||| |||||||||||| | || ||||| |||||||| ||| | |||||||||||||    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  503 acc 505  Q
    |||    
T  2412091 acc 2412089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 22986473 - 22986542
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||| |||||||||||||| ||||||| | |||| ||||||||||||||||||||||||||||    
T  22986473 cagggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacg 22986542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 27079197 - 27079128
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| || |||| | |||| ||||||||||||||||||||||||||||    
T  27079197 cagggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 27079128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 36187795 - 36187864
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| || |||| |||||| |||||||| |||||||||||||||||||    
T  36187795 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 36187864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 16198708 - 16198778
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||| ||||| |||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  16198708 ccagggccttccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 16198778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 19523385 - 19523315
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||| |||||||||||||||||||||| || |||| |||||| ||||||| ||||||||||||||||||||    
T  19523385 ccagagccgtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacg 19523315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 31194527 - 31194597
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||| |||||||||| || |||| |||||| ||||||| ||||||||||||||||||||    
T  31194527 ccagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacg 31194597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 7671118 - 7671049
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||| | |||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  7671118 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 7671049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 9364476 - 9364407
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||  |||| |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||    
T  9364476 cagggccacccctaagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacg 9364407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 503
Target Start/End: Complemental strand, 10407565 - 10407464
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| |||||||||||| |||||||| |||| |||||  ||||| | ||| |||||||| ||| |||||| |||||||    
T  10407565 aaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgagg 10407466  T
Q  502 aa 503  Q
    ||    
T  10407465 aa 10407464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 411 - 504
Target Start/End: Complemental strand, 24395834 - 24395741
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaac 504  Q
    |||||||||||| |||| |||||||||||||||||||||  |||||||| |  |||| |||||||||||||| ||  ||||||| |||||||||    
T  24395834 atgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaac 24395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 377
Target Start/End: Complemental strand, 2275070 - 2275006
Alignment:
Q  313 ccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||||||||| || | || |||||| ||||||||||||||||||||||||||||    
T  2275070 ccgtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacg 2275006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 11242314 - 11242417
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||||||||||  ||| |||||||||||||||||  ||  ||||||||| | |||| |||||| || |||| ||| ||||||||||||||    
T  11242314 aaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgagg 11242413  T
Q  502 aacc 505  Q
    ||||    
T  11242414 aacc 11242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 40794323 - 40794426
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||| |||||| |||| |||||||| |||||||| | |||||| ||||  | |||||| |||||||||||| ||| |||||||||||||     
T  40794323 aaaagaacaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgaga 40794422  T
Q  502 aacc 505  Q
    ||||    
T  40794423 aacc 40794426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 497
Target Start/End: Complemental strand, 10543768 - 10543682
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacat 497  Q
    |||||| | ||| |||| |||||||||||||| ||||||  ||||||||||| |||| |||||||||||||| ||| ||||||||||    
T  10543768 atgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 478
Target Start/End: Original strand, 22648734 - 22648808
Alignment:
Q  404 aagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtga 478  Q
    |||||| |||||||||||| |||| ||||||||||||||||| ||| |||||||||| || ||| ||||||||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtga 22648808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 23283942 - 23284012
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||| |||| |||| |   ||||| ||||||||||||||||||||||||||||    
T  23283942 ccagggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaacg 23284012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 403 - 505
Target Start/End: Original strand, 41911614 - 41911716
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| |||||| | |||  ||| |||||||| |||||||||||| |||||||| |||||||||||||| || ||||| |||  |||||| |||||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgagga 41911713  T
Q  503 acc 505  Q
    |||    
T  41911714 acc 41911716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 432 - 505
Target Start/End: Complemental strand, 15639717 - 15639644
Alignment:
Q  432 aaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||||||||||| |||||||||||| |||| |||||| ||||||| |||  ||||||||| |||||||    
T  15639717 aaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaacc 15639644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 16799240 - 16799309
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| |||||| |||||| | |||||||||||||||||||    
T  16799240 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacg 16799309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 38869279 - 38869348
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| |||||| |||||||| |||| ||||||||||||||    
T  38869279 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacg 38869348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 28822253 - 28822321
Alignment:
Q  309 agggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||| ||||||||||||||| |||  |||||| ||||||||  ||||||||||||||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaacg 28822321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 376
Target Start/End: Original strand, 34756289 - 34756349
Alignment:
Q  316 tccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||||    
T  34756289 tccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 34756349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 7622322 - 7622444
Alignment:
Q  8 gaaatggctgttttcattcaccatatcatcctcaaatacaactgggacatggttgatatt---gatcaacctattgtatacccttttgttgattttccca 104  Q
    |||||||||||||||||||||||| |||| ||||| ||||| |||||  ||  ||||| |   |||||| || ||| ||| ||||||||||||||||| |    
T  7622322 gaaatggctgttttcattcaccatctcattctcaactacaattgggaattgactgataataacgatcaagcttttgcatatccttttgttgattttccta 7622421  T
Q  105 aaggtttgccaattagagtccaa 127  Q
    ||||  | | |||||||||||||    
T  7622422 aaggcctacaaattagagtccaa 7622444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 16591990 - 16592058
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    ||||||||||| |||||||| ||||| || |||| | |||| ||||||||||| |||||||||||||||    
T  16591990 cagggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaac 16592058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 449
Target Start/End: Complemental strand, 606258 - 606211
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtg 449  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtg 606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 493
Target Start/End: Complemental strand, 17345060 - 17344969
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtat 493  Q
    |||| ||| |||||||||||| |||| ||| |  ||||||||||| || | | |||||||||||||||||||| | ||||| ||| ||||||    
T  17345060 aaaataacaatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtat 17344969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 27530588 - 27530543
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaag 446  Q
    ||||||||| |||||||||||| |||| ||||||||| ||||||||    
T  27530588 aaaaagaacaatgttctatttaaattttttaaaagattaatacaag 27530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 27924267 - 27924198
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||  || ||||||||| || ||  ||| | |||| ||||||||||||||||||||||||||||    
T  27924267 cagggccgtttctaagaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacg 27924198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 31881348 - 31881417
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||| ||||  |||| || |||| |||||| ||||| || |||| ||||||||||||||    
T  31881348 cagggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacg 31881417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 40389461 - 40389518
Alignment:
Q  316 tccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaa 373  Q
    ||||| |||||||||||| || |||| |||||| |||||| | |||||||||||||||    
T  40389461 tccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaa 40389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 3e-43; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 21582878 - 21582769
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  21582878 aaaagaacaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 21582779  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  21582778 aacccccacc 21582769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 54619202 - 54619311
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  54619202 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 54619301  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  54619302 aacccccacc 54619311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 403 - 511
Target Start/End: Complemental strand, 47467790 - 47467682
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  47467790 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgagga 47467691  T
Q  503 acccccacc 511  Q
    |||||||||    
T  47467690 acccccacc 47467682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 3953895 - 3954004
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  3953895 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgagg 3953994  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  3953995 aacccccacc 3954004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 34290635 - 34290744
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  34290635 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgagg 34290734  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  34290735 aacccccacc 34290744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 411 - 511
Target Start/End: Complemental strand, 44708575 - 44708475
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44708575 atgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 44708476  T
Q  511 c 511  Q
    |    
T  44708475 c 44708475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 507
Target Start/End: Complemental strand, 42098908 - 42098803
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| ||||||||||||||    
T  42098908 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgagg 42098809  T
Q  502 aacccc 507  Q
    ||||||    
T  42098808 aacccc 42098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 53149313 - 53149422
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || || | ||||||||| ||||||||||||||    
T  53149313 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgagg 53149412  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  53149413 aacccccacc 53149422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 53506883 - 53506992
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||| ||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  53506883 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaga 53506982  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  53506983 aacccccacc 53506992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 411 - 507
Target Start/End: Original strand, 8073346 - 8073442
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccc 507  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  8073346 atgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccc 8073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 37168474 - 37168365
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  37168474 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgagg 37168375  T
Q  502 aacccccacc 511  Q
    ||| ||||||    
T  37168374 aactcccacc 37168365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 38681092 - 38681201
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||||||||||||||    
T  38681092 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 38681191  T
Q  502 aacccccacc 511  Q
    || |||||||    
T  38681192 aaaccccacc 38681201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 43207237 - 43207345
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  43207237 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgagg 43207335  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  43207336 aacccccacc 43207345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 54407156 - 54407265
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||| ||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||    
T  54407156 aaaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-ag 54407254  T
Q  501 gaacccccacc 511  Q
     ||||||||||    
T  54407255 taacccccacc 54407265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 36716024 - 36716133
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||||||| |||||    
T  36716024 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagg 36716123  T
Q  502 aacccccacc 511  Q
     |||||||||    
T  36716124 gacccccacc 36716133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 411 - 507
Target Start/End: Original strand, 27078577 - 27078673
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccc 507  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||    
T  27078577 atgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27078673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 411 - 507
Target Start/End: Original strand, 27084374 - 27084470
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccc 507  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||    
T  27084374 atgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27084470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 414 - 509
Target Start/End: Original strand, 9878698 - 9878793
Alignment:
Q  414 ttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccca 509  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  9878698 ttctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataaggaaccccca 9878793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 415 - 508
Target Start/End: Original strand, 50939245 - 50939338
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccc 508  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  50939245 tctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaaccccc 50939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 402 - 509
Target Start/End: Complemental strand, 18372590 - 18372479
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatat----gcggtacacccaaaggtgaaaatgacttccgtatacat 497  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| |||||||||    ||||||||| || |||||||||||||| ||||||||||    
T  18372590 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacat 18372491  T
Q  498 gaggaaccccca 509  Q
    |||||| |||||    
T  18372490 gaggaatcccca 18372479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 401 - 510
Target Start/End: Original strand, 50258621 - 50258731
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacaccc-aaaggtgaaaatgacttccgtatacatga 499  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||  | |||||||||||||   |||| |||||    
T  50258621 aaaaagagcgatgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatga 50258720  T
Q  500 ggaacccccac 510  Q
    |||||||||||    
T  50258721 ggaacccccac 50258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 8420433 - 8420330
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||| ||||||| | ||||    
T  8420433 aaaagaataatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgagg 8420334  T
Q  502 aacc 505  Q
    ||||    
T  8420333 aacc 8420330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 36606063 - 36605973
Alignment:
Q  411 atgttctatttatatttattaaaa-gataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||    
T  36606063 atgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 54574826 - 54574929
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| | |||| ||||||||||||| |||||||||||||||||||||||| || ||||| ||| || |||||||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgagg 54574925  T
Q  502 aacc 505  Q
    ||||    
T  54574926 aacc 54574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 438 - 511
Target Start/End: Original strand, 29620423 - 29620496
Alignment:
Q  438 aaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacc 29620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 28689369 - 28689458
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    |||||||||||| ||||   |||||||||||||||||||||||||||||||| || | |||||||||||||| ||| |||||||||||||    
T  28689369 atgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgag 28689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 32319163 - 32319234
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    |||||||||||| |||| ||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  32319163 atgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaat 32319234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 375
Target Start/End: Complemental strand, 42098989 - 42098922
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    |||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||    
T  42098989 cagggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaa 42098922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 21582961 - 21582891
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||||||||||||||| || |||  |||||| ||||||||||||||||||||||||||||    
T  21582961 ccagggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacg 21582891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 47467873 - 47467803
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||||||||||||||| || |||| |||||| |||||||| |||||||||||||||||||    
T  47467873 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 47467803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 403 - 500
Target Start/End: Complemental strand, 49393195 - 49393099
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||||| ||||||| |||| |||| ||||||||||||||||||| | ||||||||||  |||||||||||||| ||||| ||| |||||||||||||    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgag 49393099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 482
Target Start/End: Complemental strand, 26279649 - 26279569
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    |||||||| |||||||||||| |||| |||||||||||||| |||||| |||||||||||  ||||||||||| |||||||    
T  26279649 aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaat 26279569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 38681011 - 38681079
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||||    
T  38681011 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 38681079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 375
Target Start/End: Original strand, 3953816 - 3953882
Alignment:
Q  309 agggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    |||||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||| ||||    
T  3953816 agggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaa 3953882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 403 - 505
Target Start/End: Complemental strand, 25855527 - 25855426
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| |||||||||||| |||| ||||||||||| ||||||||| ||||||||||  || ||||||||| ||||||| ||| ||||||||| || ||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaaga 25855429  T
Q  503 acc 505  Q
    |||    
T  25855428 acc 25855426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 53149235 - 53149301
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||| ||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||    
T  53149235 ggccgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacg 53149301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 8073257 - 8073326
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| || |||| || ||| |||||||| |||||||||||||||||||    
T  8073257 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacg 8073326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 29620361 - 29620426
Alignment:
Q  305 ggccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaat 370  Q
    ||||||||||||||||||||||||||||| || |||| |||||| |||||||| ||||||||||||    
T  29620361 ggccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 37168551 - 37168486
Alignment:
Q  312 gccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||| |||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  37168551 gccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 37168486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 44708660 - 44708595
Alignment:
Q  312 gccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||| |||||||||||| ||| ||| |||||| ||||||||||||||||||||||||||||    
T  44708660 gccgtccctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacg 44708595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 54407073 - 54407142
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| |||||| |||||||||| |||||||||||||||||    
T  54407073 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacg 54407142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 36715942 - 36716010
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||||| |||||    
T  36715942 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaac 36716010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 478
Target Start/End: Complemental strand, 42453511 - 42453435
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtga 478  Q
    |||||||| |||||| ||||| |||| ||||||||||||||||||||| | |||||||||| |||||| ||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 42453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 510
Target Start/End: Complemental strand, 48157223 - 48157138
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||| |||||||||||||| ||||||          ||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  48157223 tctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccac 48157138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 403 - 505
Target Start/End: Complemental strand, 790042 - 789940
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| || ||||||||| |||| |||||  |||||||||||||| | ||||||||  |||||||||||||| ||||| ||  || ||||||||||||    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgagga 789943  T
Q  503 acc 505  Q
    |||    
T  789942 acc 789940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 36606149 - 36606083
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||| ||||||||||||| |||| || ||| |||||||| |||||||||||||||||||    
T  36606149 ggccgtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacg 36606083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 376
Target Start/End: Complemental strand, 48157310 - 48157248
Alignment:
Q  314 cgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    ||||||| |||||||||||| || | || ||||||||||||||||||||||||||||||||||    
T  48157310 cgtccctaagaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaac 48157248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 467
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  414 ttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtaca 467  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 50939152 - 50939221
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| ||||||||| || || |||| | |||| ||||||||||||||||||||||||||||    
T  50939152 cagggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 50939221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 27078486 - 27078554
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| |  |||| || ||| |||||||| ||||||||||||||||||    
T  27078486 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaac 27078554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 27084283 - 27084351
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| |  |||| || ||| |||||||| ||||||||||||||||||    
T  27084283 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaac 27084351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 54619121 - 54619189
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| || |||| || ||| |||||| |||| |||||||||||||||    
T  54619121 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaac 54619189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 34290554 - 34290623
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||| | |||||||||||| || |||| |||||| |||||| | |||||||||||||||||||    
T  34290554 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacg 34290623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 43207157 - 43207226
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||| ||||| || |||| |||||| ||||||||||||||||||| | ||||||    
T  43207157 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacg 43207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 48720429 - 48720498
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||| ||||| || |||| |||||| ||||||||  ||||||||||||||||||    
T  48720429 cagggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaacg 48720498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 50258542 - 50258610
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    ||||||||| |||||||||||||||| || |||| |||||  |||||||  ||||||||||||||||||    
T  50258542 cagggccgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaac 50258610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 52374763 - 52374660
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| ||   | |||||||||| ||| |||||| ||||| |||| | ||||| |||||| ||| |||||||||||| |    
T  52374763 aaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaag 52374664  T
Q  502 aacc 505  Q
    ||||    
T  52374663 aacc 52374660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 53506801 - 53506869
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||| | |||||||| ||| || |||| |||||| || ||||||||||||||||||||||||    
T  53506801 ccagggccgtcc-taagaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaac 53506869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 503
Target Start/End: Complemental strand, 29598179 - 29598113
Alignment:
Q  436 ataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaa 503  Q
    ||||||||||||| ||||||||||| | ||||| ||||| || |||| ||| ||||||||||||||||    
T  29598179 ataaatacaaggttccgtatatatgtgatacactcaaagatg-aaatcactaccgtatacatgaggaa 29598113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 377
Target Start/End: Complemental strand, 18372658 - 18372601
Alignment:
Q  320 tgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||| ||  | | |||||| |||||||| |||||||||||||||||||    
T  18372658 tgagaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacg 18372601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 3e-43; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 5316795 - 5316686
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  5316795 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 5316696  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  5316695 aacccccacc 5316686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 14146415 - 14146306
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  14146415 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagg 14146316  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  14146315 aacccccacc 14146306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 23185542 - 23185433
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  23185542 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagg 23185443  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  23185442 aacccccacc 23185433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 403 - 511
Target Start/End: Complemental strand, 6771905 - 6771797
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  6771905 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgagga 6771806  T
Q  503 acccccacc 511  Q
    ||| |||||    
T  6771805 acctccacc 6771797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 9173030 - 9173130
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  9173030 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccac 9173129  T
Q  511 c 511  Q
    |    
T  9173130 c 9173130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 9181012 - 9181112
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  9181012 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccac 9181111  T
Q  511 c 511  Q
    |    
T  9181112 c 9181112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 411 - 511
Target Start/End: Complemental strand, 27559743 - 27559643
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27559743 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 27559644  T
Q  511 c 511  Q
    |    
T  27559643 c 27559643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 3406533 - 3406424
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |  |||||||||||||| ||||||||||||||    
T  3406533 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagg 3406434  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  3406433 aacccccacc 3406424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 3440287 - 3440396
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |  |||||||||||||| ||||||||||||||    
T  3440287 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagg 3440386  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  3440387 aacccccacc 3440396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 5027664 - 5027555
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||| ||||||    
T  5027664 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgagg 5027565  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  5027564 aacccccacc 5027555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 44655856 - 44655747
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  44655856 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagg 44655757  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  44655756 aacccccacc 44655747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 1366885 - 1366985
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  1366885 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccac 1366984  T
Q  511 c 511  Q
    |    
T  1366985 c 1366985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 4971625 - 4971725
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  4971625 atgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccac 4971724  T
Q  511 c 511  Q
    |    
T  4971725 c 4971725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 415 - 511
Target Start/End: Complemental strand, 19955819 - 19955723
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  19955819 tctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacc 19955723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 410 - 511
Target Start/End: Complemental strand, 16140162 - 16140061
Alignment:
Q  410 gatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccca 509  Q
    |||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||| | |||||||||||||| |||||||||||||||| |||||    
T  16140162 gatgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatcccca 16140063  T
Q  510 cc 511  Q
    ||    
T  16140062 cc 16140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 411 - 507
Target Start/End: Complemental strand, 17169062 - 17168966
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccc 507  Q
    ||||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  17169062 atgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccc 17168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 41697135 - 41697244
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| ||  ||||||||||| ||||| ||| | |||||||||||| ||||||||||||||    
T  41697135 aaaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgagg 41697234  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  41697235 aacccccacc 41697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 50881545 - 50881436
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| | | |||||||||||||| | ||||||||||||    
T  50881545 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgagg 50881446  T
Q  502 aacccccacc 511  Q
    |||| |||||    
T  50881445 aacctccacc 50881436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 40501801 - 40501897
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||    
T  40501801 tctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacc 40501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 411 - 509
Target Start/End: Original strand, 51607446 - 51607545
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtg-ccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccca 509  Q
    ||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  51607446 atgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactccca 51607545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 402 - 496
Target Start/End: Original strand, 21740935 - 21741029
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtataca 496  Q
    |||||| | ||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||    
T  21740935 aaaagagcaatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 411 - 505
Target Start/End: Original strand, 38547043 - 38547137
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||  | |||||||||||||||    
T  38547043 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacc 38547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 13913491 - 13913589
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccg--tatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||| |||||||||||||| ||| |||||  ||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||    
T  13913491 tctatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacc 13913589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 39134720 - 39134824
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaa-gataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||||| ||||||||||  ||||||||||||||| ||| ||| | |||||||||||    
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  501 gaacc 505  Q
    |||||    
T  39134820 gaacc 39134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 45758609 - 45758506
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| ||||||||||||| |||||||  |||||||||   |||| |||||||||||||| ||| ||||||||||||||    
T  45758609 aaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgagg 45758510  T
Q  502 aacc 505  Q
    ||||    
T  45758509 aacc 45758506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 5027746 - 5027677
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||||||    
T  5027746 cagggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacg 5027677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 6771989 - 6771920
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  6771989 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 6771920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 402 - 494
Target Start/End: Complemental strand, 6889726 - 6889634
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtata 494  Q
    |||||| | ||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| | |||||||    
T  6889726 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6889634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 402 - 494
Target Start/End: Complemental strand, 6891572 - 6891480
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtata 494  Q
    |||||| | ||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| | |||||||    
T  6891572 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 402 - 503
Target Start/End: Complemental strand, 5533428 - 5533326
Alignment:
Q  402 aaaagaacgatgttctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    |||||||| || ||||||||| |||| || |||||||||| |||||||||||||||||||  |||||  ||||||||||||| ||| |||||||||||||    
T  5533428 aaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T
Q  501 gaa 503  Q
    |||    
T  5533328 gaa 5533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 402 - 500
Target Start/End: Complemental strand, 38853637 - 38853539
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||||||  ||||||||||| |||| ||||| ||||||||||||||| ||||||||||  ||| | |||||||||||||| ||| |||||||||||||    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag 38853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 14146495 - 14146426
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| || ||||  ||||| ||||||||||||||||||||||||||||    
T  14146495 cagggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacg 14146426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 482
Target Start/End: Original strand, 22865459 - 22865538
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    |||||| | ||||||||||||||||| |||||||||||||||||| |||  ||||||| ||||||||||||||||||||||    
T  22865459 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 403 - 505
Target Start/End: Complemental strand, 6221791 - 6221690
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| |||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||| | ||| |||||||| | |  |||||| |||||||    
T  6221791 aaagaacaatgttctatttaaattt-ttaaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  503 acc 505  Q
    |||    
T  6221692 acc 6221690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 44895761 - 44895658
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||| ||| ||| ||||||||||||| |||||||||||||| |||||| ||  |      ||||||||||||||||||||||| | ||||||||||||||    
T  44895761 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtggcgggt------ggtacacccaaaggtgaaaatgattaccgtatacatgagg 44895668  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  44895667 aacccccacc 44895658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 3406614 - 3406545
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||| ||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||| ||||||    
T  3406614 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacg 3406545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 3440206 - 3440275
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||| ||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||| ||||||    
T  3440206 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacg 3440275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 23185622 - 23185553
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||| |||||||||||||||| || ||||| ||| | ||||||||||||||||||||||||||||    
T  23185622 cagggccgttcctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacg 23185553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 43235798 - 43235871
Alignment:
Q  432 aaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||||||| |||  |||||||||||||||||    
T  43235798 aaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 505
Target Start/End: Complemental strand, 26804059 - 26803960
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| ||| | |||||| |||| |||||||||||||||||| || |||||||||||| |||||   ||||||||||| ||| ||||||||||||| |    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 27906646 - 27906714
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| || |||| |  ||| |||||||||||||||||||||||||||    
T  27906646 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 27906714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 44655936 - 44655868
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| || |||| || ||| ||||||| |||||||||||||||||||    
T  44655936 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaac 44655868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 16140244 - 16140181
Alignment:
Q  314 cgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||| || |||| |||||| |||||||||| |||||||||||||||||    
T  16140244 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacg 16140181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 21740852 - 21740919
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    ||||||||||| |||||||||||||| || |||| | |||| ||||||||||||||||||||||||||    
T  21740852 cagggccgtccttgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaa 21740919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 33170874 - 33170771
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||| ||| ||||| |||||| |||| ||||||  ||||||||| |||  |||||||||||||||||| || ||||||||| ||| |||||||||||||     
T  33170874 aaaaaaacaatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgaga 33170775  T
Q  502 aacc 505  Q
    ||||    
T  33170774 aacc 33170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 50146411 - 50146308
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| | || || |||||||||| ||||||||||| |||||| | || |||||||||| ||||| | | || |||||||||||    
T  50146411 aaaagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgagg 50146312  T
Q  502 aacc 505  Q
    ||||    
T  50146311 aacc 50146308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 492
Target Start/End: Complemental strand, 35392384 - 35392295
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgta 492  Q
    |||||||  ||||| |||||| |||| ||||  ||||||||||||||||||||||||||||||| | |||||||||||||| ||| |||||    
T  35392384 aaaagaataatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 17169151 - 17169082
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| || ||| |||||||| |||||||||||||||||||    
T  17169151 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacg 17169082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 19955912 - 19955843
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||| |||||| |||||||||||| || |||| | |||| ||||||||||||||||||||||||||||    
T  19955912 cagggctgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 19955843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 22865378 - 22865447
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||||||||||||||  | |||| |||||| |||||||| || ||||||||||||||||    
T  22865378 cagggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacg 22865447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 4971536 - 4971604
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||| |||||||||||||| |||| || | ||||||||| ||||||| |||||||||||||||||||    
T  4971536 cagggctgtccctgagaattctgaggctcggttcggggaatgaaaagagaccagtgataaaatcaaaac 4971604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 27906727 - 27906824
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | |||||| |||||||||| ||||||||||||||||||||||||             |||||| |||||||||||||| ||||||||||||||    
T  27906727 aaaagagcaatgttccatttatattttttaaaagataaatacaaggtgccgc------------cacccagaggtgaaaatgactaccgtatacatgagg 27906814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 50881621 - 50881557
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    ||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||||| ||||    
T  50881621 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaa 50881557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 502
Target Start/End: Original strand, 10925951 - 10926052
Alignment:
Q  402 aaaagaacgatgttctattta--tatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatga 499  Q
    |||||||| || |||||||||  ||||| |||||| |||||||||| |||||||||||||| | | || |||||| ||||||| ||| ||||||||||||    
T  10925951 aaaagaacaatattctatttaagtattt-ttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatga 10926049  T
Q  500 gga 502  Q
    |||    
T  10926050 gga 10926052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 465
Target Start/End: Original strand, 17322621 - 17322684
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggta 465  Q
    |||||||| ||||||||||||||||| || |||||||||||||| ||  |||||||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcggta 17322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 9172939 - 9173000
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaa 368  Q
    |||||||||||||| |||||||||||| || |||| |||||| |||||||||| ||||||||    
T  9172939 ccagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaa 9173000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 9180921 - 9180982
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaa 368  Q
    |||||||||||||| |||||||||||| || |||| |||||| |||||||||| ||||||||    
T  9180921 ccagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaa 9180982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 40501707 - 40501776
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| ||  ||| | |||| |||||||| |||||||||||||||||||    
T  40501707 cagggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacg 40501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 51607358 - 51607427
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||| |||||||| | |||||||||| || |||| |||||| |||||||| |||||||||||||||||||    
T  51607358 caggaccgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 51607427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 1366795 - 1366857
Alignment:
Q  306 gccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaa 368  Q
    |||||||||||| ||  ||||| ||||| ||||||| |||||| |||||||||||||||||||    
T  1366795 gccagggccgtctctacgaatttggaggctcagctctgggaatgaaaagaggccagtgataaa 1366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 6889806 - 6889736
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||| ||| |||||||||| || | || | |||| |||||||| |||||||||||||||||||    
T  6889806 ccagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacg 6889736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 6891652 - 6891582
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||| ||| |||||||||| || | || | |||| |||||||| |||||||||||||||||||    
T  6891652 ccagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacg 6891582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 13913401 - 13913465
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    |||||||||| |||||||||||| |  |||| | |||| |||||| |||||||||||||||||||    
T  13913401 ggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaa 13913465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 34247216 - 34247153
Alignment:
Q  314 cgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||| |||||||||||||| || |||| || ||| |||| ||| |||||||||||||||||||    
T  34247216 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacg 34247153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 367
Target Start/End: Original strand, 52127460 - 52127519
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataa 367  Q
    |||| ||||||||||||||||||||| || |||| |||| ||||| |||||| |||||||    
T  52127460 caggaccgtccctgagaattcggaggctcggctctgggattaaaaggaggccggtgataa 52127519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 41697072 - 41697124
Alignment:
Q  325 attcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||| | || |||| |||||| |||||||| |||||||||||||||||||    
T  41697072 attcggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 41697124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 20091278 - 20091388
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20091278 aaaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 20091377  T
Q  501 gaacccccacc 511  Q
    |||||||||||    
T  20091378 gaacccccacc 20091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 8171537 - 8171646
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  8171537 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagg 8171636  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  8171637 aacccccacc 8171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 10955588 - 10955479
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  10955588 aaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagg 10955489  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  10955488 aacccccacc 10955479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 18776764 - 18776873
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||     
T  18776764 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgaga 18776863  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  18776864 aacccccacc 18776873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 29077324 - 29077215
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  29077324 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgagg 29077225  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  29077224 aacccccacc 29077215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 403 - 511
Target Start/End: Original strand, 12596286 - 12596394
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||||    
T  12596286 aaagagcgatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgagga 12596385  T
Q  503 acccccacc 511  Q
    |||||||||    
T  12596386 acccccacc 12596394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 24525692 - 24525792
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  24525692 atgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccac 24525791  T
Q  511 c 511  Q
    |    
T  24525792 c 24525792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 48983841 - 48983951
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  48983841 aaaaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgag 48983940  T
Q  501 gaacccccacc 511  Q
    |||||||||||    
T  48983941 gaacccccacc 48983951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 506
Target Start/End: Complemental strand, 19692198 - 19692094
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  19692198 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgagg 19692099  T
Q  502 aaccc 506  Q
    |||||    
T  19692098 aaccc 19692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 47984976 - 47985077
Alignment:
Q  411 atgttctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccca 509  Q
    ||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  47984976 atgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaaccccca 47985075  T
Q  510 cc 511  Q
    ||    
T  47985076 cc 47985077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 411 - 510
Target Start/End: Original strand, 10329417 - 10329516
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||| || | |||||||||||||||||||| ||||||||||||| |||||||||    
T  10329417 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccccac 10329516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 413 - 511
Target Start/End: Original strand, 38414885 - 38414983
Alignment:
Q  413 gttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||| ||||| |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  38414885 gttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacc 38414983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 23551081 - 23551178
Alignment:
Q  415 tctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||| || |||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  23551081 tctatttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 23551178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 403 - 502
Target Start/End: Original strand, 9021799 - 9021898
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| || | ||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagga 9021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 402 - 484
Target Start/End: Complemental strand, 26254097 - 26254015
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatga 484  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26254097 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaatga 26254015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 2611260 - 2611363
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||| ||||||||| ||  | ||||||||||||    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgagg 2611359  T
Q  502 aacc 505  Q
    ||||    
T  2611360 aacc 2611363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 411 - 507
Target Start/End: Complemental strand, 8239782 - 8239686
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccc 507  Q
    ||||||||||||||||| |||||| ||||||| || |||||||||||||| |||||||||||| |||||||||| | ||||||| ||||||||||||    
T  8239782 atgttctatttatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccc 8239686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 415 - 483
Target Start/End: Original strand, 33162350 - 33162418
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatg 483  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33162350 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 7398555 - 7398452
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| || |||||||||||||||||||| |||||||| | |||||| |||||||||||| ||| || |||||||||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  502 aacc 505  Q
    ||||    
T  7398455 aacc 7398452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 411 - 502
Target Start/End: Complemental strand, 23859168 - 23859077
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    |||||||||||| |||| ||||||||||||||||| || ||||||||||||| ||||||||||| ||||||| ||| |||||||||||||||    
T  23859168 atgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgagga 23859077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 403 - 494
Target Start/End: Original strand, 6765680 - 6765771
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtata 494  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||| |||||||| || ||||| |||||||||||||| ||| |||||||    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtata 6765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 414 - 501
Target Start/End: Complemental strand, 28749801 - 28749715
Alignment:
Q  414 ttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||| || | |||||||| ||| ||||||||||||||    
T  28749801 ttctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 36891682 - 36891579
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||  ||||||||||||||||| ||||| ||| ||||||| |||  |||||||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  36891682 aaaagaataatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgagg 36891583  T
Q  502 aacc 505  Q
    ||||    
T  36891582 aacc 36891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 12596206 - 12596276
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  12596206 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 12596276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 401 - 494
Target Start/End: Complemental strand, 23744901 - 23744808
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtata 494  Q
    ||||||||| |||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||||| |||| | ||||| ||| |||||||    
T  23744901 aaaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 12981430 - 12981327
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||  ||||||||||||  ||| |||||||||||||||||||| || |||||| ||||||||| ||||||||||||| ||| | ||||| ||||||    
T  12981430 aaaagaagaatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgagg 12981331  T
Q  502 aacc 505  Q
    ||||    
T  12981330 aacc 12981327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 29077405 - 29077335
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||||||||||||||| || |||| |||||| |||||||| |||||||||||||||||||    
T  29077405 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 29077335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 460 - 511
Target Start/End: Complemental strand, 25010479 - 25010428
Alignment:
Q  460 gcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25010479 gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 25010428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 27237421 - 27237524
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||  ||||||||| | |  | | |||||||||||| |||  |||||||||||||    
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  502 aacc 505  Q
    ||||    
T  27237521 aacc 27237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 20153296 - 20153206
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    ||||| |||||| |||| ||||||||||||||||| |||  ||||||||||| || |||||||| ||||||| ||| ||||||||||||||    
T  20153296 atgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagg 20153206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 502
Target Start/End: Original strand, 36902924 - 36903022
Alignment:
Q  404 aagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    |||||| |||||||||||| |||| |||| ||||||||||||| || ||||||||||  ||||||| |||||||||||| | | | |||||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 10329327 - 10329396
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||| ||| |||||||||||| || |||| |||||| ||||||||||||||||||||||||||||    
T  10329327 cagggccgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 10329396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 20091197 - 20091266
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| | |||| ||||||||||||||||||||||||||||    
T  20091197 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 20091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 25010611 - 25010542
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| || ||| ||||||||||||||||||||||||||||    
T  25010611 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacg 25010542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 18776682 - 18776750
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    ||||||||||||||||||||||||||| || |||| || ||| |||||||| |||||||||||||||||    
T  18776682 ccagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaa 18776750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 8171460 - 8171523
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaa 374  Q
    ||||||||||||||||||||||| || |||| |||||| |||||||| ||||||||||||||||    
T  8171460 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaa 8171523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 24525599 - 24525668
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||| ||||||| |||||||||||| || |||| |||||| |||||||||| |||||||||||||||||    
T  24525599 cagggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacg 24525668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 48983756 - 48983825
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| | |||| ||||||||||| ||||||||||||||||    
T  48983756 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacg 48983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 23550988 - 23551056
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    ||||| ||||||| |||||||||||| || |||| | |||| |||||||||||||||||||||||||||    
T  23550988 cagggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaac 23551056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 26254178 - 26254110
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||| ||||||||||||||||||| || |||  |||||| |||||||| ||||||||||||||||||    
T  26254178 cagggctgtccctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaac 26254110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 28749895 - 28749827
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    ||||||||||||||| |||||||||| || |||| |||||| ||||||| ||| |||||||||||||||    
T  28749895 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaac 28749827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 12419493 - 12419596
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| ||||||||||||||||| || || ||||| || | |||| |||||| ||||||| |||   | ||||||||||    
T  12419493 aaaagaacaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgagg 12419592  T
Q  502 aacc 505  Q
    ||||    
T  12419593 aacc 12419596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 482
Target Start/End: Original strand, 21763586 - 21763665
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    |||||||  ||||||||||| |||| ||||||||||||||||| ||  |||||||||||| |||||| ||| ||||||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaat 21763665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 10955671 - 10955605
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaa 374  Q
    |||||| |||| |||||||||||||| |||||||||||||| || ||||| ||||||| ||||||||    
T  10955671 cagggctgtccatgagaattcggaggctcagctcggggaatgaatagaggtcagtgattaaatcaaa 10955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 504
Target Start/End: Original strand, 23020498 - 23020583
Alignment:
Q  418 atttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaac 504  Q
    ||||| |||| |||||||||||||| ||||||  ||||||||||   |||| ||||||||||||| ||| |||||||||||||||||    
T  23020498 atttagattttttaaaagataaatataaggtgttgtatatatgcac-acactcaaaggtgaaaatcactaccgtatacatgaggaac 23020583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 47984885 - 47984954
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| ||||||||  || || |||| |||||| |||||| |||||||||||||||||||||    
T  47984885 cagggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacg 47984954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 482
Target Start/End: Complemental strand, 18201237 - 18201161
Alignment:
Q  406 gaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    |||| ||| |||||||| |||| |||||| ||||||||||| |||| |||||||| |||||||| || |||||||||    
T  18201237 gaacaatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaat 18201161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 504
Target Start/End: Complemental strand, 38971330 - 38971255
Alignment:
Q  429 ttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaac 504  Q
    ||||||||||||||||||||| ||||||||||   |||||| ||| |||||||| ||| ||||| ||| |||||||    
T  38971330 ttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 377
Target Start/End: Complemental strand, 8239869 - 8239802
Alignment:
Q  310 gggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||| |||||| ||||| || |||| || ||| ||||||||||| ||||||||| ||||||    
T  8239869 gggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacg 8239802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 503
Target Start/End: Original strand, 17800257 - 17800320
Alignment:
Q  440 atacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaa 503  Q
    ||||||| || ||||||||||  ||||||||||| |||||||| ||| |||||| |||||||||    
T  17800257 atacaagttgtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaa 17800320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 40357303 - 40357366
Alignment:
Q  314 cgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||| |||||||||||||| || |||| || ||| |||| ||| |||||||||||||||||||    
T  40357303 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacg 40357366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 19692280 - 19692210
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||| ||||| |||||||||| | || |||| || ||| ||||| | ||||||||||||||||||||    
T  19692280 ccagggccctccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacg 19692210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 459
Target Start/End: Original strand, 9014177 - 9014233
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatat 459  Q
    ||||||| ||||| |||||| |||| ||||||||||||||||| |||  ||||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 9046133 - 9046023
Alignment:
Q  402 aaaagaacgatgttctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    |||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9046133 aaaagaacaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 9046034  T
Q  501 gaacccccacc 511  Q
    |||||||||||    
T  9046033 gaacccccacc 9046023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 3155320 - 3155211
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  3155320 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagg 3155221  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  3155220 aacccccacc 3155211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 4505997 - 4505888
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  4505997 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagg 4505898  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  4505897 aacccccacc 4505888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 6965110 - 6965001
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  6965110 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 6965011  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  6965010 aacccccacc 6965001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 411 - 508
Target Start/End: Complemental strand, 24410531 - 24410434
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccc 508  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24410531 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccc 24410434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 29939861 - 29939970
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29939861 aaaagagcaatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 29939960  T
Q  502 aacccccacc 511  Q
    |||| |||||    
T  29939961 aaccaccacc 29939970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 403 - 511
Target Start/End: Complemental strand, 3953108 - 3953000
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||| ||||||||    
T  3953108 aaagaccgatgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgagga 3953009  T
Q  503 acccccacc 511  Q
    |||||||||    
T  3953008 acccccacc 3953000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 10762573 - 10762673
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10762573 atgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 10762672  T
Q  511 c 511  Q
    |    
T  10762673 c 10762673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 26716232 - 26716122
Alignment:
Q  402 aaaagaacgatgttctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    |||||| | ||||||||||||||||| || |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  26716232 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 26716133  T
Q  501 gaacccccacc 511  Q
    |||||||||||    
T  26716132 gaacccccacc 26716122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 507
Target Start/End: Complemental strand, 7162887 - 7162782
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| ||||||| ||||||    
T  7162887 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgagg 7162788  T
Q  502 aacccc 507  Q
    ||||||    
T  7162787 aacccc 7162782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 12337447 - 12337556
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  12337447 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgagg 12337546  T
Q  502 aacccccacc 511  Q
    ||||||||||    
T  12337547 aacccccacc 12337556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 8907087 - 8907187
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||||    
T  8907087 atgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccac 8907186  T
Q  511 c 511  Q
    |    
T  8907187 c 8907187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 16097111 - 16097008
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| || |||||||||||    
T  16097111 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgagg 16097012  T
Q  502 aacc 505  Q
    ||||    
T  16097011 aacc 16097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 27506752 - 27506848
Alignment:
Q  415 tctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| | ||||||||||||||| ||||||    
T  27506752 tctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacc 27506848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 402 - 503
Target Start/End: Original strand, 24035544 - 24035645
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||| ||| ||||||||||    
T  24035544 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgagg 24035643  T
Q  502 aa 503  Q
    ||    
T  24035644 aa 24035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 404 - 505
Target Start/End: Complemental strand, 38400899 - 38400798
Alignment:
Q  404 aagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaa 503  Q
    |||||| |||||||||||| |||| ||||||||||||||||||||| | |||||||||| ||||  ||||||||||||| ||| ||||||||||||||||    
T  38400899 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaa 38400800  T
Q  504 cc 505  Q
    ||    
T  38400799 cc 38400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 34694078 - 34693994
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgact 486  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  34694078 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgact 34693994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 34716490 - 34716406
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgact 486  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  34716490 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgact 34716406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 401 - 505
Target Start/End: Original strand, 13800542 - 13800647
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacaccc-aaaggtgaaaatgacttccgtatacatga 499  Q
    ||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| ||| |  |||||| ||    
T  13800542 aaaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacga 13800641  T
Q  500 ggaacc 505  Q
    ||||||    
T  13800642 ggaacc 13800647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 479
Target Start/End: Complemental strand, 40636241 - 40636164
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaa 479  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  40636241 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 401 - 505
Target Start/End: Original strand, 12134038 - 12134142
Alignment:
Q  401 aaaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    ||||||||| |||||||||||| |    |||||||||||||||||||| ||||||||||||| |||||||||| |||||||| ||| |||||||||| ||    
T  12134038 aaaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattag 12134137  T
Q  501 gaacc 505  Q
    |||||    
T  12134138 gaacc 12134142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 21665699 - 21665802
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| |||||||||||||||| |||| |||||||||| | |||| | ||| |||||||| ||| ||||||||||||||    
T  21665699 aaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgagg 21665798  T
Q  502 aacc 505  Q
    ||||    
T  21665799 aacc 21665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 28425709 - 28425812
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |  | ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||| || |||| ||||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgagg 28425808  T
Q  502 aacc 505  Q
    ||||    
T  28425809 aacc 28425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 40636317 - 40636253
Alignment:
Q  312 gccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  40636317 gccgtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaac 40636253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 403 - 505
Target Start/End: Original strand, 11912757 - 11912859
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| |||||||||||| |||||  |||| |||||||||| |||||||||||||||  |||| |||||| ||||||| ||| |||||||||| ||||    
T  11912757 aaagaacaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataagga 11912856  T
Q  503 acc 505  Q
    |||    
T  11912857 acc 11912859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 4506078 - 4506010
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||||    
T  4506078 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 4506010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 423 - 479
Target Start/End: Original strand, 5952735 - 5952791
Alignment:
Q  423 tatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaa 479  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5952735 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 7742132 - 7742236
Alignment:
Q  402 aaaagaacgatgttctatttatatttatt-aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgag 500  Q
    |||||||| ||||||||||||||||| || ||||||||||||||| ||| | |||||||||| |||| |||||||||||||  |||  ||||| ||||||    
T  7742132 aaaagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgag 7742231  T
Q  501 gaacc 505  Q
    |||||    
T  7742232 gaacc 7742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 375
Target Start/End: Complemental strand, 7162967 - 7162900
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    ||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||| ||||    
T  7162967 cagggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaa 7162900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 27506659 - 27506728
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || |||| | |||| ||||||||||||||||||||||||||||    
T  27506659 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 27506728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 29939781 - 29939850
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||| ||||||||||||||||| ||| || |||| ||||||||||||||| |||||||||||||||||||    
T  29939781 caggaccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacg 29939850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 436 - 505
Target Start/End: Complemental strand, 37182739 - 37182670
Alignment:
Q  436 ataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||||||| |||||||||||  |||||||||| |||||||| ||| ||||||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacc 37182670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 6965186 - 6965122
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    ||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||||||||||    
T  6965186 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa 6965122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 5952642 - 5952705
Alignment:
Q  314 cgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||||||||||||| ||||  ||||| ||||||||||| ||||||||||||||||    
T  5952642 cgtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacg 5952705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 12337365 - 12337432
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    |||||||||||||||||||||| ||| || |||| || ||| ||||||||||||||||||||||||||    
T  12337365 cagggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa 12337432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 9046214 - 9046144
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||  ||||||||  || ||||||| |||||| ||||||||||||||||||||||||||||    
T  9046214 ccagggccgtcccaaagaattcgttggctcagctctgggaattaaaagaggccagtgataaaatcaaaacg 9046144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 10762488 - 10762554
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||| |||||| ||||| ||||||| |||||| ||||||||||||||||||||| ||||||    
T  10762488 ggccgtccctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacg 10762554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 403 - 505
Target Start/End: Original strand, 16227368 - 16227470
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| || ||||||||| |||| ||||||||||||||||||||| |||||||||| | |||||| | || ||||||| ||| |  ||||||| ||||    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataagga 16227467  T
Q  503 acc 505  Q
    |||    
T  16227468 acc 16227470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 34694155 - 34694089
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| | || || ||| |||||||||| |||||||||||||||||    
T  34694155 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacg 34694089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 34716567 - 34716501
Alignment:
Q  311 ggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| | || || ||| |||||||||| |||||||||||||||||    
T  34716567 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacg 34716501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 8906995 - 8907064
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||||| |||||||||||||||| || |||| |  ||| |||||||||||||||||||||||||||    
T  8906995 ccagggccgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 8907064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 24410623 - 24410554
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| |||||||||||| || | |  |||||| ||||||||||||||||||||||||||||    
T  24410623 cagggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacg 24410554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 431 - 499
Target Start/End: Original strand, 22727530 - 22727598
Alignment:
Q  431 aaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatga 499  Q
    ||||||||||||| | ||| ||||||||||||||||||||||| |||||||| ||| || |||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 482
Target Start/End: Complemental strand, 42029247 - 42029168
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    ||||||| |||||||||||| |||| |||||||||||||| |||||| | |||| |||  ||||||| ||||||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaat 42029168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 1396616 - 1396685
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaac 376  Q
    |||||||| ||| |||||||||||||| ||  ||| || ||| |||||||||||||||||||||||||||    
T  1396616 ccagggccttccttgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaac 1396685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 26716313 - 26716244
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    ||||||||||||| ||||||||  || || |||  |||||| |||||||| |||||||||||||||||||    
T  26716313 cagggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacg 26716244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 375
Target Start/End: Complemental strand, 3953188 - 3953121
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaa 375  Q
    ||||| |||||||||||||| ||||| || |||  || ||| |||||||| |||||||||||||||||    
T  3953188 cagggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaa 3953121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 8327801 - 8327732
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||| |||||||| | |||||||||| |||| || || ||| |||||||  |||||||||||||||||||    
T  8327801 caggaccgtccctaaaaattcggaggctcagttctggaaatgaaaagagatcagtgataaaatcaaaacg 8327732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 22727456 - 22727497
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatac 443  Q
    |||||||| |||||||||||| |||| |||||||||||||||    
T  22727456 aaaagaacaatgttctatttaaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 459
Target Start/End: Original strand, 11952588 - 11952643
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatat 459  Q
    ||||||| |||||||||||| |||| ||||||||| ||||||| ||| |||||||||    
T  11952588 aaagaacaatgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 412 - 511
Target Start/End: Complemental strand, 1437 - 1338
Alignment:
Q  412 tgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccacc 511  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  1437 tgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacc 1338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 1527 - 1458
Alignment:
Q  308 cagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||||||||||||| || |||| |||||| |||||||| |||||||||||||||||||    
T  1527 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 1458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 257 - 360
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||| |    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatg 356  T
Q  502 aacc 505  Q
    ||||    
T  357 aacc 360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 411 - 505
Target Start/End: Original strand, 206497 - 206591
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  206497 atgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacc 206591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 411 - 505
Target Start/End: Original strand, 173518 - 173612
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||| |||||||| |||||||||    
T  173518 atgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacc 173612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 411 - 505
Target Start/End: Complemental strand, 39020 - 38926
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    |||||||||||| |||| ||||||||||||||||||||| |||||||||||| ||||| |||| |||||||| ||| ||||||| ||||||||||    
T  39020 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacc 38926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 403 - 503
Target Start/End: Original strand, 23993 - 24093
Alignment:
Q  403 aaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagga 502  Q
    ||||||| || ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | | |||||| ||| ||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataagga 24092  T
Q  503 a 503  Q
    |    
T  24093 a 24093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 230858 - 230960
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||| |||||||||||| |||| |||||||||||||  ||||||  ||||||||||| || |||||||||||||||| ||| || |||||||||||    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgagg 230957  T
Q  502 aac 504  Q
    |||    
T  230958 aac 230960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 1458 - 1355
Alignment:
Q  402 aaaagaacgatgttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgagg 501  Q
    |||||||  |||||||||||| | || |||||||||||||| ||||||| ||||||||||  |||||||||| |||||||| |||  |||||||||||||    
T  1458 aaaagaataatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgagg 1359  T
Q  502 aacc 505  Q
    ||||    
T  1358 aacc 1355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 401 - 505
Target Start/End: Complemental strand, 40192 - 40086
Alignment:
Q  401 aaaaagaacgatgttctattta--tatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatg 498  Q
    ||||||||| ||||||||||||  | ||| ||||||||||||||||||||||||||| ||||  |||||||| ||||||||||| ||   ||||||||||    
T  40192 aaaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatg 40093  T
Q  499 aggaacc 505  Q
    || ||||    
T  40092 agcaacc 40086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 401 - 505
Target Start/End: Complemental strand, 138252 - 138146
Alignment:
Q  401 aaaaagaacgatgttctattta--tatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatg 498  Q
    ||||||||| ||||||||||||  | ||| ||||||||||||||||||||||||||| ||||  |||||||| ||||||||||| ||   ||||||||||    
T  138252 aaaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatg 138153  T
Q  499 aggaacc 505  Q
    || ||||    
T  138152 agcaacc 138146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 351359 - 351413
Alignment:
Q  428 attaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaat 482  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  351359 attaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaat 351413  T

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Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 183245 - 183175
Alignment:
Q  307 ccagggccgtccctgagaattcggaggttcagctcggggaataaaaagaggccagtgataaaatcaaaacg 377  Q
    |||||||||||||||| ||||| |||| || |||| |||||| ||||||||||||||||||||| ||||||    
T  183245 ccagggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacg 183175  T

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Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 456 - 509
Target Start/End: Complemental strand, 181969 - 181916
Alignment:
Q  456 atatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaaccccca 509  Q
    |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaccccca 181916  T

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Target: scaffold0001; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 460
Target Start/End: Complemental strand, 183156 - 183106
Alignment:
Q  410 gatgttctatttatatttattaaaagataaatacaaggtgccgtatatatg 460  Q
    |||||||||||||||||| ||||||||||||||||| ||  ||||||||||    
T  183156 gatgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

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Target: scaffold0227 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 16095 - 16028
Alignment:
Q  438 aaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacc 505  Q
    ||||||||| || ||||| ||||||||||| |||||| ||||||| ||| ||||||||||||| ||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacc 16028  T

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Target: scaffold0227; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 16160 - 16123
Alignment:
Q  411 atgttctatttatatttattaaaagataaatacaaggt 448  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  16160 atgttctatttaaattttttaaaagataaatacaaggt 16123  T

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Target: scaffold0229 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 23976 - 23879
Alignment:
Q  413 gttctatttatatttattaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgacttccgtatacatgaggaacccccac 510  Q
    ||||||||||| ||| |||||| |||||||  ||||||||||| | || || || ||||||  | ||||||||| |||||||||  || |||||||||    
T  23976 gttctatttattttttttaaaaaataaatatgaggtgccgtatttttggggaacccccaaaaataaaaatgactaccgtatacacaagaaacccccac 23879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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